Result of FASTA (omim) for
pF1KB6496
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB6496, 358 aa
1>>>pF1KB6496 358 - 358 aa - 358 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.4881+/-0.000363; mu= 15.7892+/- 0.022
mean_var=72.1713+/-14.123, 0's: 0 Z-trim(114.0): 116 B-trim: 105 in 1/57
Lambda= 0.150970
statistics sampled from 23477 (23599) to 23477 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.654), E-opt: 0.2 (0.277), width: 16
Scan time: 5.550
The best scores are: opt bits E(85289)
NP_057390 (OMIM: 611341) dnaJ homolog subfamily B ( 358) 2424 537.1 2.2e-152
NP_705842 (OMIM: 610263,617091) dnaJ homolog subfa ( 316) 464 110.2 6.4e-24
XP_011543306 (OMIM: 610263,617091) PREDICTED: dnaJ ( 350) 401 96.5 9.4e-20
NP_006136 (OMIM: 604572) dnaJ homolog subfamily B ( 340) 342 83.7 6.8e-16
NP_005871 (OMIM: 611322) dnaJ homolog subfamily A ( 412) 341 83.5 9.2e-16
NP_001258510 (OMIM: 607987) dnaJ homolog subfamily ( 747) 337 82.8 2.8e-15
NP_061854 (OMIM: 607987) dnaJ homolog subfamily C ( 793) 337 82.8 2.9e-15
NP_001128582 (OMIM: 608382) dnaJ homolog subfamily ( 453) 329 80.9 6.1e-15
NP_005138 (OMIM: 608382) dnaJ homolog subfamily A ( 480) 329 80.9 6.4e-15
XP_006722796 (OMIM: 604572) PREDICTED: dnaJ homolo ( 240) 325 79.9 6.6e-15
XP_011526258 (OMIM: 604572) PREDICTED: dnaJ homolo ( 240) 325 79.9 6.6e-15
XP_006722797 (OMIM: 604572) PREDICTED: dnaJ homolo ( 240) 325 79.9 6.6e-15
NP_001300893 (OMIM: 604572) dnaJ homolog subfamily ( 240) 325 79.9 6.6e-15
NP_001287843 (OMIM: 604572) dnaJ homolog subfamily ( 240) 325 79.9 6.6e-15
XP_016867122 (OMIM: 603511,611332) PREDICTED: dnaJ ( 211) 321 79.0 1.1e-14
NP_005485 (OMIM: 603511,611332) dnaJ homolog subfa ( 241) 321 79.0 1.2e-14
XP_006715886 (OMIM: 603511,611332) PREDICTED: dnaJ ( 257) 321 79.0 1.3e-14
NP_036460 (OMIM: 602634) dnaJ homolog subfamily B ( 223) 320 78.8 1.3e-14
NP_490647 (OMIM: 603511,611332) dnaJ homolog subfa ( 326) 321 79.1 1.6e-14
XP_005249573 (OMIM: 603511,611332) PREDICTED: dnaJ ( 334) 321 79.1 1.6e-14
XP_011514006 (OMIM: 603511,611332) PREDICTED: dnaJ ( 334) 321 79.1 1.6e-14
XP_005249572 (OMIM: 603511,611332) PREDICTED: dnaJ ( 334) 321 79.1 1.6e-14
NP_001300968 (OMIM: 602837) dnaJ homolog subfamily ( 240) 310 76.6 6.4e-14
NP_001530 (OMIM: 602837) dnaJ homolog subfamily A ( 397) 310 76.7 9.7e-14
NP_060096 (OMIM: 608376) dnaJ homolog subfamily B ( 409) 307 76.1 1.6e-13
XP_005269989 (OMIM: 608376) PREDICTED: dnaJ homolo ( 409) 307 76.1 1.6e-13
NP_001002762 (OMIM: 608376) dnaJ homolog subfamily ( 409) 307 76.1 1.6e-13
XP_005269988 (OMIM: 608376) PREDICTED: dnaJ homolo ( 411) 307 76.1 1.6e-13
NP_001304032 (OMIM: 611327) dnaJ homolog subfamily ( 77) 296 73.3 2.1e-13
NP_001034639 (OMIM: 604139,614881,617017) dnaJ hom ( 277) 300 74.5 3.2e-13
NP_006727 (OMIM: 604139,614881,617017) dnaJ homolo ( 324) 300 74.5 3.7e-13
XP_016873165 (OMIM: 610263,617091) PREDICTED: dnaJ ( 258) 292 72.7 1e-12
XP_016873166 (OMIM: 610263,617091) PREDICTED: dnaJ ( 258) 292 72.7 1e-12
XP_016873167 (OMIM: 610263,617091) PREDICTED: dnaJ ( 258) 292 72.7 1e-12
XP_016873164 (OMIM: 610263,617091) PREDICTED: dnaJ ( 258) 292 72.7 1e-12
XP_011543309 (OMIM: 610263,617091) PREDICTED: dnaJ ( 258) 292 72.7 1e-12
XP_011543311 (OMIM: 610263,617091) PREDICTED: dnaJ ( 258) 292 72.7 1e-12
NP_001304029 (OMIM: 611327) dnaJ homolog subfamily ( 297) 289 72.1 1.8e-12
NP_001304028 (OMIM: 611327) dnaJ homolog subfamily ( 337) 289 72.1 2e-12
NP_008965 (OMIM: 611327) dnaJ homolog subfamily B ( 337) 289 72.1 2e-12
NP_660157 (OMIM: 611336) dnaJ homolog subfamily B ( 309) 287 71.7 2.5e-12
XP_011527351 (OMIM: 611203) PREDICTED: dnaJ homolo ( 198) 284 70.9 2.8e-12
XP_011527350 (OMIM: 611203) PREDICTED: dnaJ homolo ( 198) 284 70.9 2.8e-12
NP_079495 (OMIM: 611203) dnaJ homolog subfamily C ( 198) 284 70.9 2.8e-12
XP_011515922 (OMIM: 613945) PREDICTED: dnaJ homolo ( 180) 279 69.8 5.4e-12
NP_001304030 (OMIM: 611327) dnaJ homolog subfamily ( 222) 280 70.1 5.5e-12
NP_001304031 (OMIM: 611327) dnaJ homolog subfamily ( 222) 280 70.1 5.5e-12
NP_149096 (OMIM: 613945) dnaJ homolog subfamily C ( 199) 279 69.8 5.9e-12
XP_011515920 (OMIM: 613945) PREDICTED: dnaJ homolo ( 199) 279 69.8 5.9e-12
NP_699161 (OMIM: 611337) dnaJ homolog subfamily B ( 232) 272 68.3 1.9e-11
>>NP_057390 (OMIM: 611341) dnaJ homolog subfamily B memb (358 aa)
initn: 2424 init1: 2424 opt: 2424 Z-score: 2856.8 bits: 537.1 E(85289): 2.2e-152
Smith-Waterman score: 2424; 99.7% identity (100.0% similar) in 358 aa overlap (1-358:1-358)
10 20 30 40 50 60
pF1KB6 MAPQNLSTFCLLLLYLIGAVIAGRDFYKILGVPRSASIKDIKKAYRKLALQLHPDRNPDD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 MAPQNLSTFCLLLLYLIGAVIAGRDFYKILGVPRSASIKDIKKAYRKLALQLHPDRNPDD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 PQAQEKFQDLGAAYEVLSDSEKRKQYDTYGEEGLKDGHQSSHGDIFSHFFGDFGFMFGGT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 PQAQEKFQDLGAAYEVLSDSEKRKQYDTYGEEGLKDGHQSSHGDIFSHFFGDFGFMFGGT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 PRQQDRNIPRGSDIIVDLEVTLEEVYAGNFVEVVRNKPVARQAPGKRKCNCRQEMRTTQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 PRQQDRNIPRGSDIIVDLEVTLEEVYAGNFVEVVRNKPVARQAPGKRKCNCRQEMRTTQL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 GPGRFQMTQEVVCDECPNVKLVNEERTLEVEIEPGVRDGMEYPFIGEGEPHVDGEPGDLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 GPGRFQMTQEVVCDECPNVKLVNEERTLEVEIEPGVRDGMEYPFIGEGEPHVDGEPGDLR
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 FRIKVVKHPIFERRGDDLYTNVTVSLVESLVGFEMDITHLDGHKVHISRDKITRPGAKLW
:::::::::::::::::::::::.::::::::::::::::::::::::::::::::::::
NP_057 FRIKVVKHPIFERRGDDLYTNVTISLVESLVGFEMDITHLDGHKVHISRDKITRPGAKLW
250 260 270 280 290 300
310 320 330 340 350
pF1KB6 KKGEGLPNFDNNNIKGSLIITFDVDFPKEQLTEEAREGIKQLLKQGSVQKVYNGLQGY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 KKGEGLPNFDNNNIKGSLIITFDVDFPKEQLTEEAREGIKQLLKQGSVQKVYNGLQGY
310 320 330 340 350
>>NP_705842 (OMIM: 610263,617091) dnaJ homolog subfamily (316 aa)
initn: 392 init1: 218 opt: 464 Z-score: 550.4 bits: 110.2 E(85289): 6.4e-24
Smith-Waterman score: 464; 29.5% identity (62.5% similar) in 325 aa overlap (23-343:2-314)
10 20 30 40 50 60
pF1KB6 MAPQNLSTFCLLLLYLIGAVIAGRDFYKILGVPRSASIKDIKKAYRKLALQLHPDRNPDD
:.:.:..::. :.. .::.:::.:::. :: .. ..
NP_705 MGQDYYSVLGITRNSEDAQIKQAYRRLALKHHPLKS-NE
10 20 30
70 80 90 100 110 120
pF1KB6 PQAQEKFQDLGAAYEVLSDSEKRKQYDTYGEEGLKDGHQSSHGDIFSHFFGDFGFMFGGT
:.. : :.... ::.:::: :: :: .:::::: : : :. :..: :
NP_705 PSSAEIFRQIAEAYDVLSDPMKRGIYDKFGEEGLKGGIPLEFG---SQTPWTTGYVFHGK
40 50 60 70 80 90
130 140 150 160 170
pF1KB6 PRQQDRNIPRGSDIIVDL-EVTLEEVYAGNFVEVVRNKPVARQAPGKRKCNCRQEMRTTQ
:.. ... :.. . .. .. :: :: . ... : .: : .. . ..
NP_705 PEKVFHEFFGGNNPFSEFFDAEGSEVDL-NFGGL-QGRGVKKQDPQVER-DLYLSLEDLF
100 110 120 130 140 150
180 190 200 210 220 230
pF1KB6 LG-PGRFQMTQEVVCDECPNVKLVNEERTLEVEIEPGVRDGMEYPFIGEGEPHVDGEPGD
.: .......:. .. . . ... : ....:: :.: . : ::. . :.:
NP_705 FGCTKKIKISRRVLNEDGYSSTI--KDKILTIDVKPGWRQGTRITFEKEGDQGPNIIPAD
160 170 180 190 200 210
240 250 260 270 280 290
pF1KB6 LRFRIKVVKHPIFERRGDDLYTNVTVSLVESLVGFEMDITHLDGHKVHISRDKITRPGAK
. : .: :: :.:..:.:. . : ..:. ... :: . ..: . : .: :
NP_705 IIFIVKEKLHPRFRRENDNLFFVNPIPLGKALTCCTVEVRTLDDRLLNIPINDIIHP--K
220 230 240 250 260
300 310 320 330 340 350
pF1KB6 LWKK--GEGLPNFDNNNIKGSLIITFDVDFPKEQLTEEAREGIKQLLKQGSVQKVYNGLQ
.:: :::.: .. . ::.:.: ::..:: .:: . .. ..: :
NP_705 YFKKVPGEGMPLPEDPTKKGDLFIFFDIQFPT-RLTPQKKQMLRQALLT
270 280 290 300 310
pF1KB6 GY
>>XP_011543306 (OMIM: 610263,617091) PREDICTED: dnaJ hom (350 aa)
initn: 355 init1: 218 opt: 401 Z-score: 475.6 bits: 96.5 E(85289): 9.4e-20
Smith-Waterman score: 401; 27.7% identity (60.2% similar) in 314 aa overlap (36-343:49-348)
10 20 30 40 50 60
pF1KB6 LSTFCLLLLYLIGAVIAGRDFYKILGVPRSASIKDIKKAYRKLALQLHPDRNPDDPQAQE
.. .: . ::.:::. :: .. ..:.. :
XP_011 QCPALGLELDAATPGPPSLLDRGVNIHLEHSTAEDKDQRYRRLALKHHPLKS-NEPSSAE
20 30 40 50 60 70
70 80 90 100 110 120
pF1KB6 KFQDLGAAYEVLSDSEKRKQYDTYGEEGLKDGHQSSHGDIFSHFFGDFGFMFGGTPRQQD
:.... ::.:::: :: :: .:::::: : : :. :..: : :..
XP_011 IFRQIAEAYDVLSDPMKRGIYDKFGEEGLKGGIPLEFG---SQTPWTTGYVFHGKPEKVF
80 90 100 110 120 130
130 140 150 160 170 180
pF1KB6 RNIPRGSDII---VDLEVTLEEVYAGNFVEVVRNKPVARQAPGKRKCNCRQEMRTTQLG-
... :.. . : : . .. :.. ... : .: : .. . .. .:
XP_011 HEFFGGNNPFSEFFDAEGSEVDLNFGGL----QGRGVKKQDPQVER-DLYLSLEDLFFGC
140 150 160 170 180
190 200 210 220 230 240
pF1KB6 PGRFQMTQEVVCDECPNVKLVNEERTLEVEIEPGVRDGMEYPFIGEGEPHVDGEPGDLRF
.......:. .. . . ... : ....:: :.: . : ::. . :.:. :
XP_011 TKKIKISRRVLNEDGYSSTI--KDKILTIDVKPGWRQGTRITFEKEGDQGPNIIPADIIF
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 RIKVVKHPIFERRGDDLYTNVTVSLVESLVGFEMDITHLDGHKVHISRDKITRPGAKLWK
.: :: :.:..:.:. . : ..:. ... :: . ..: . : .: : .:
XP_011 IVKEKLHPRFRRENDNLFFVNPIPLGKALTCCTVEVRTLDDRLLNIPINDIIHP--KYFK
250 260 270 280 290 300
310 320 330 340 350
pF1KB6 K--GEGLPNFDNNNIKGSLIITFDVDFPKEQLTEEAREGIKQLLKQGSVQKVYNGLQGY
: :::.: .. . ::.:.: ::..:: .:: . .. ..: :
XP_011 KVPGEGMPLPEDPTKKGDLFIFFDIQFPT-RLTPQKKQMLRQALLT
310 320 330 340 350
>>NP_006136 (OMIM: 604572) dnaJ homolog subfamily B memb (340 aa)
initn: 587 init1: 271 opt: 342 Z-score: 406.3 bits: 83.7 E(85289): 6.8e-16
Smith-Waterman score: 587; 32.9% identity (62.7% similar) in 343 aa overlap (23-343:2-338)
10 20 30 40 50 60
pF1KB6 MAPQNLSTFCLLLLYLIGAVIAGRDFYKILGVPRSASIKDIKKAYRKLALQLHPDRNPDD
:.:.:. ::. :.:: ..::.:::. ::. :::.: .
NP_006 MGKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKE-
10 20 30
70 80 90 100 110
pF1KB6 PQAQEKFQDLGAAYEVLSDSEKRKQYDTYGEEGLKDGHQS------SHGDIFSH-FFGD-
: :.:::.... ::.:::: .::. .: ::::::: . : ..: ::. : ::
NP_006 PGAEEKFKEIAEAYDVLSDPRKREIFDRYGEEGLKGSGPSGGSGGGANGTSFSYTFHGDP
40 50 60 70 80 90
120 130 140 150 160
pF1KB6 ---FGFMFGG-TPRQQ---DRNIPRGSDIIVDLEVTLEEVYAGNFVEVVRNKPVARQAPG
:. .::: .: . .:: .: :: : . . :.:..: .. . : :.
NP_006 HAMFAEFFGGRNPFDTFFGQRNGEEGMDI--DDPFSGFPMGMGGFTNVNFGRSRSAQEPA
100 110 120 130 140 150
170 180 190 200 210
pF1KB6 KRKCN--CRQEMRTT--QLGPG---RFQMTQEVVCDECPNVKLVNEERTLEVEIEPGVRD
..: . ...:.. .. : ....... . . ... ::.. : .:.. : ..
NP_006 RKKQDPPVTHDLRVSLEEIYSGCTKKMKISHKRLNPDGKSIR--NEDKILTIEVKKGWKE
160 170 180 190 200 210
220 230 240 250 260 270
pF1KB6 GMEYPFIGEGEPHVDGEPGDLRFRIKVVKHPIFERRGDDLYTNVTVSLVESLVGFEMDIT
: . : ::. .. :.:. : .: : ::.: :.:. . .:: :.: : ...
NP_006 GTKITFPKEGDQTSNNIPADIVFVLKDKPHNIFKRDGSDVIYPARISLREALCGCTVNVP
220 230 240 250 260 270
280 290 300 310 320 330
pF1KB6 HLDGHKVHISRDKITRPGAKLWKKGEGLPNFDNNNIKGSLIITFDVDFPKEQLTEEAREG
:::. . . . ::: . ::::: . . .:.::: :.: :: :.. . .:
NP_006 TLDGRTIPVVFKDVIRPGMRRKVPGEGLPLPKTPEKRGDLIIEFEVIFP-ERIPQTSRTV
280 290 300 310 320 330
340 350
pF1KB6 IKQLLKQGSVQKVYNGLQGY
..:.:
NP_006 LEQVLPI
340
>>NP_005871 (OMIM: 611322) dnaJ homolog subfamily A memb (412 aa)
initn: 602 init1: 206 opt: 341 Z-score: 403.9 bits: 83.5 E(85289): 9.2e-16
Smith-Waterman score: 715; 38.5% identity (65.0% similar) in 343 aa overlap (19-328:2-339)
10 20 30 40 50 60
pF1KB6 MAPQNLSTFCLLLLYLIGAVIAGRDFYKILGVPRSASIKDIKKAYRKLALQLHPDRNPDD
: .: .: ::::: .:: ...:::::::: . :::.::.
NP_005 MANVADTKLYDILGVPPGASENELKKAYRKLAKEYHPDKNPN-
10 20 30 40
70 80 90 100 110
pF1KB6 PQAQEKFQDLGAAYEVLSDSEKRKQYDTYGEEGLKDGHQSSHG--DIFSHFFGD--FGFM
: .::.... ::::::. :::. :: :::.::..: .. : :::::.:: ::::
NP_005 --AGDKFKEISFAYEVLSNPEKRELYDRYGEQGLREGSGGGGGMDDIFSHIFGGGLFGFM
50 60 70 80 90 100
120 130 140 150 160
pF1KB6 FGGTPRQQDRNIPRGSDIIVDLEVTLEEVYAGNFVEVVRNKPVARQA----PGK----RK
:. :... . :: :.. :.:.::..: :. ... .: : .: :: .:
NP_005 -GNQSRSRN-GRRRGEDMMHPLKVSLEDLYNGKTTKLQLSKNVLCSACSGQGGKSGAVQK
110 120 130 140 150
170 180 190 200
pF1KB6 CN-CRQE---MRTTQLGPGRFQMTQ----------EVV-----CDECPNVKLVNEERTLE
:. :: . . ::.:: :. : ::. : .: . :...: . ::
NP_005 CSACRGRGVRIMIRQLAPGMVQQMQSVCSDCNGEGEVINEKDRCKKCEGKKVIKEVKILE
160 170 180 190 200 210
210 220 230 240 250 260
pF1KB6 VEIEPGVRDGMEYPFIGEGEPHVDGEPGDLRFRIKVVKHPIFERRGDDLYTNVTVSLVES
:... :.. :.. : ::.. ::::. . .. .: .:.: :.::. . ..:::.
NP_005 VHVDKGMKHGQRITFTGEADQAPGVEPGDIVLLLQEKEHEVFQRDGNDLHMTYKIGLVEA
220 230 240 250 260 270
270 280 290 300 310 320
pF1KB6 LVGFEMDITHLDGHKVHISRD--KITRPGAKLWKKGEGLPNFDNNNIKGSLIITFDVDFP
: ::.. . ::::... .. :. .:: .:::.:.. : ::.: : :::.::
NP_005 LCGFQFTFKHLDGRQIVVKYPPGKVIEPGCVRVVRGEGMPQYRNPFEKGDLYIKFDVQFP
280 290 300 310 320 330
330 340 350
pF1KB6 KEQLTEEAREGIKQLLKQGSVQKVYNGLQGY
.
NP_005 ENNWINPDKLSELEDLLPSRPEVPNIIGETEEVELQEFDSTRGSGGGQRREAYNDSSDEE
340 350 360 370 380 390
>>NP_001258510 (OMIM: 607987) dnaJ homolog subfamily C m (747 aa)
initn: 290 init1: 290 opt: 337 Z-score: 395.4 bits: 82.8 E(85289): 2.8e-15
Smith-Waterman score: 337; 42.5% identity (78.8% similar) in 113 aa overlap (9-121:19-129)
10 20 30 40 50
pF1KB6 MAPQNLSTFCLLLLYLIGAVIAGRDFYKILGVPRSASIKDIKKAYRKLAL
.:.:..:. : . .:::..::: ..:: ..:..:..::::
NP_001 MGVWLNKDDYIRDLKRIILCFLIVYMAILVGTDQDFYSLLGVSKTASSREIRQAFKKLAL
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB6 QLHPDRNPDDPQAQEKFQDLGAAYEVLSDSEKRKQYDTYGEEGLKDGHQSSHGDIFSHFF
.::::.::..:.:. : .. :::::.: . ::.:: :::.::.: .:... . ....
NP_001 KLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLED-NQGGQYESWNYYR
70 80 90 100 110
120 130 140 150 160 170
pF1KB6 GDFGFMFGGTPRQQDRNIPRGSDIIVDLEVTLEEVYAGNFVEVVRNKPVARQAPGKRKCN
::: .. :
NP_001 YDFG-IYDDDPEIITLERREFDAAVNSGELWFVNFYSPGCSHCHDLAPTWRDFAKEVDGL
120 130 140 150 160 170
>>NP_061854 (OMIM: 607987) dnaJ homolog subfamily C memb (793 aa)
initn: 291 init1: 291 opt: 337 Z-score: 395.0 bits: 82.8 E(85289): 2.9e-15
Smith-Waterman score: 337; 42.5% identity (78.8% similar) in 113 aa overlap (9-121:19-129)
10 20 30 40 50
pF1KB6 MAPQNLSTFCLLLLYLIGAVIAGRDFYKILGVPRSASIKDIKKAYRKLAL
.:.:..:. : . .:::..::: ..:: ..:..:..::::
NP_061 MGVWLNKDDYIRDLKRIILCFLIVYMAILVGTDQDFYSLLGVSKTASSREIRQAFKKLAL
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB6 QLHPDRNPDDPQAQEKFQDLGAAYEVLSDSEKRKQYDTYGEEGLKDGHQSSHGDIFSHFF
.::::.::..:.:. : .. :::::.: . ::.:: :::.::.: .:... . ....
NP_061 KLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLED-NQGGQYESWNYYR
70 80 90 100 110
120 130 140 150 160 170
pF1KB6 GDFGFMFGGTPRQQDRNIPRGSDIIVDLEVTLEEVYAGNFVEVVRNKPVARQAPGKRKCN
::: .. :
NP_061 YDFG-IYDDDPEIITLERREFDAAVNSGELWFVNFYSPGCSHCHDLAPTWRDFAKEVDGL
120 130 140 150 160 170
>>NP_001128582 (OMIM: 608382) dnaJ homolog subfamily A m (453 aa)
initn: 347 init1: 300 opt: 329 Z-score: 389.2 bits: 80.9 E(85289): 6.1e-15
Smith-Waterman score: 434; 27.5% identity (56.9% similar) in 367 aa overlap (19-355:87-441)
10 20 30 40
pF1KB6 MAPQNLSTFCLLLLYLIGAVIAGRDFYKILGVPRSASIKDIKKAYRKL
: .: .:.:.::::::.:: :.::::: .:
NP_001 PRALLTLRPGVSLTGTKHNPFICTASFHTSAPLAKEDYYQILGVPRNASQKEIKKAYYQL
60 70 80 90 100 110
50 60 70 80 90 100
pF1KB6 ALQLHPDRNPDDPQAQEKFQDLGAAYEVLSDSEKRKQYDTYGEEGLKDGHQSS-HG----
: . ::: : :::.:.:::..:. ::::::: ::::::.:: :. : ..: :.
NP_001 AKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEVKRKQYDAYGSAGFDPGASGSQHSYWKG
120 130 140 150 160 170
110 120 130 140 150
pF1KB6 -------DIFSHFFGDFGFM-FGGTPRQQDRNIPRGSDIIVDLEVT-LEEVYAGNFVEVV
..: ..::.:. :: :. .. . . ... .. :....
NP_001 GPTVDPEELFRKIFGEFSSSSFGDFQTVFDQPQEYFMELTFNQAAKGVNKEFTVNIMDTC
180 190 200 210 220 230
160 170 180 190 200
pF1KB6 RNKPVARQAPGKRKCNCR----QEMRTTQLGPGRFQMTQE-------VV---CDECPNVK
. . :: . .:. . :.: . :: .. : . .. : : ..
NP_001 ERCNGKGNEPGTKVQHCHYCGGSGMETINTGPFVMRSTCRRCGGRGSIIISPCVVCRGAG
240 250 260 270 280 290
210 220 230 240 250
pF1KB6 LVNEERTLEVEIEPGVRDG--MEYPFIGEGEPHVDGEPGDLRFRIKVVKHPIFERRGDDL
..... . . . ::.:: ...: .:. : . ::.. : :.:.: : :.
NP_001 QAKQKKRVMIPVPAGVEDGQTVRMP-VGKREIFIT-------FRVQ--KSPVFRRDGADI
300 310 320 330 340
260 270 280 290 300 310
pF1KB6 YTNVTVSLVESLVGFEMDITHLDGHKVHISRDKITRPGAKLWKKGEGLPNFDNNNIKGSL
.... .:....:.: : . .... :. :. :.:.: . :. :.
NP_001 HSDLFISIAQALLGGTARAQGLY-ETINVTIPPGTQTDQKIRMGGKGIPRI-NSYGYGDH
350 360 370 380 390 400
320 330 340 350
pF1KB6 IITFDVDFPKEQLTEEAREGIKQLLKQGSVQKVYNGLQGY
: . . ::. ... .. . .:. . ::.
NP_001 YIHIKIRVPKRLTSRQQSLILSYAEDETDVEGTVNGVTLTSSGKRSTGN
410 420 430 440 450
>>NP_005138 (OMIM: 608382) dnaJ homolog subfamily A memb (480 aa)
initn: 347 init1: 300 opt: 329 Z-score: 388.8 bits: 80.9 E(85289): 6.4e-15
Smith-Waterman score: 434; 27.5% identity (56.9% similar) in 367 aa overlap (19-355:87-441)
10 20 30 40
pF1KB6 MAPQNLSTFCLLLLYLIGAVIAGRDFYKILGVPRSASIKDIKKAYRKL
: .: .:.:.::::::.:: :.::::: .:
NP_005 PRALLTLRPGVSLTGTKHNPFICTASFHTSAPLAKEDYYQILGVPRNASQKEIKKAYYQL
60 70 80 90 100 110
50 60 70 80 90 100
pF1KB6 ALQLHPDRNPDDPQAQEKFQDLGAAYEVLSDSEKRKQYDTYGEEGLKDGHQSS-HG----
: . ::: : :::.:.:::..:. ::::::: ::::::.:: :. : ..: :.
NP_005 AKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEVKRKQYDAYGSAGFDPGASGSQHSYWKG
120 130 140 150 160 170
110 120 130 140 150
pF1KB6 -------DIFSHFFGDFGFM-FGGTPRQQDRNIPRGSDIIVDLEVT-LEEVYAGNFVEVV
..: ..::.:. :: :. .. . . ... .. :....
NP_005 GPTVDPEELFRKIFGEFSSSSFGDFQTVFDQPQEYFMELTFNQAAKGVNKEFTVNIMDTC
180 190 200 210 220 230
160 170 180 190 200
pF1KB6 RNKPVARQAPGKRKCNCR----QEMRTTQLGPGRFQMTQE-------VV---CDECPNVK
. . :: . .:. . :.: . :: .. : . .. : : ..
NP_005 ERCNGKGNEPGTKVQHCHYCGGSGMETINTGPFVMRSTCRRCGGRGSIIISPCVVCRGAG
240 250 260 270 280 290
210 220 230 240 250
pF1KB6 LVNEERTLEVEIEPGVRDG--MEYPFIGEGEPHVDGEPGDLRFRIKVVKHPIFERRGDDL
..... . . . ::.:: ...: .:. : . ::.. : :.:.: : :.
NP_005 QAKQKKRVMIPVPAGVEDGQTVRMP-VGKREIFIT-------FRVQ--KSPVFRRDGADI
300 310 320 330 340
260 270 280 290 300 310
pF1KB6 YTNVTVSLVESLVGFEMDITHLDGHKVHISRDKITRPGAKLWKKGEGLPNFDNNNIKGSL
.... .:....:.: : . .... :. :. :.:.: . :. :.
NP_005 HSDLFISIAQALLGGTARAQGLY-ETINVTIPPGTQTDQKIRMGGKGIPRI-NSYGYGDH
350 360 370 380 390 400
320 330 340 350
pF1KB6 IITFDVDFPKEQLTEEAREGIKQLLKQGSVQKVYNGLQGY
: . . ::. ... .. . .:. . ::.
NP_005 YIHIKIRVPKRLTSRQQSLILSYAEDETDVEGTVNGVTLTSSGGSTMDSSAGSKARREAG
410 420 430 440 450 460
NP_005 EDEEGFLSKLKKMFTS
470 480
>>XP_006722796 (OMIM: 604572) PREDICTED: dnaJ homolog su (240 aa)
initn: 360 init1: 271 opt: 325 Z-score: 388.6 bits: 79.9 E(85289): 6.6e-15
Smith-Waterman score: 325; 27.3% identity (58.2% similar) in 249 aa overlap (105-343:1-238)
80 90 100 110 120 130
pF1KB6 EVLSDSEKRKQYDTYGEEGLKDGHQSSHGDIFSHFFGD---FGFMFGGTPRQQDRNIPRG
.:..::: : .:: .:: .:
XP_006 MFAEFFGGRNPFDTFFG------QRNGEEG
10 20
140 150 160 170 180
pF1KB6 SDIIVDLEVTLEEVYAGNFVEVVRNKPVARQAPGKRKCN--CRQEMRTT--QLGPG---R
:: : . . :.:..: .. . : :...: . ...:.. .. : .
XP_006 MDI--DDPFSGFPMGMGGFTNVNFGRSRSAQEPARKKQDPPVTHDLRVSLEEIYSGCTKK
30 40 50 60 70 80
190 200 210 220 230 240
pF1KB6 FQMTQEVVCDECPNVKLVNEERTLEVEIEPGVRDGMEYPFIGEGEPHVDGEPGDLRFRIK
...... . . ... ::.. : .:.. : ..: . : ::. .. :.:. : .:
XP_006 MKISHKRLNPDGKSIR--NEDKILTIEVKKGWKEGTKITFPKEGDQTSNNIPADIVFVLK
90 100 110 120 130 140
250 260 270 280 290 300
pF1KB6 VVKHPIFERRGDDLYTNVTVSLVESLVGFEMDITHLDGHKVHISRDKITRPGAKLWKKGE
: ::.: :.:. . .:: :.: : ... :::. . . . ::: . ::
XP_006 DKPHNIFKRDGSDVIYPARISLREALCGCTVNVPTLDGRTIPVVFKDVIRPGMRRKVPGE
150 160 170 180 190 200
310 320 330 340 350
pF1KB6 GLPNFDNNNIKGSLIITFDVDFPKEQLTEEAREGIKQLLKQGSVQKVYNGLQGY
::: . . .:.::: :.: :: :.. . .: ..:.:
XP_006 GLPLPKTPEKRGDLIIEFEVIFP-ERIPQTSRTVLEQVLPI
210 220 230 240
358 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 23:10:52 2016 done: Fri Nov 4 23:10:53 2016
Total Scan time: 5.550 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]