Result of FASTA (omim) for
pF1KB6486
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB6486, 356 aa
1>>>pF1KB6486 356 - 356 aa - 356 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.1782+/-0.000353; mu= 12.8417+/- 0.022
mean_var=91.4973+/-19.204, 0's: 0 Z-trim(115.3): 33 B-trim: 521 in 1/53
Lambda= 0.134082
statistics sampled from 25622 (25654) to 25622 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.679), E-opt: 0.2 (0.301), width: 16
Scan time: 7.800
The best scores are: opt bits E(85289)
NP_001182177 (OMIM: 208920,606350) aprataxin isofo ( 356) 2416 477.4 2.2e-134
XP_006716854 (OMIM: 208920,606350) PREDICTED: apra ( 342) 2322 459.2 6.2e-129
NP_778243 (OMIM: 208920,606350) aprataxin isoform ( 342) 2322 459.2 6.2e-129
NP_001182178 (OMIM: 208920,606350) aprataxin isofo ( 342) 2322 459.2 6.2e-129
NP_778239 (OMIM: 208920,606350) aprataxin isoform ( 306) 2061 408.7 8.9e-114
NP_001182180 (OMIM: 208920,606350) aprataxin isofo ( 292) 1967 390.5 2.6e-108
XP_016870325 (OMIM: 208920,606350) PREDICTED: apra ( 308) 1819 361.8 1.1e-99
XP_016870324 (OMIM: 208920,606350) PREDICTED: apra ( 315) 1819 361.8 1.1e-99
XP_016870323 (OMIM: 208920,606350) PREDICTED: apra ( 325) 1819 361.9 1.2e-99
XP_016870322 (OMIM: 208920,606350) PREDICTED: apra ( 338) 1819 361.9 1.2e-99
XP_016870321 (OMIM: 208920,606350) PREDICTED: apra ( 369) 1819 361.9 1.3e-99
XP_016870320 (OMIM: 208920,606350) PREDICTED: apra ( 423) 1819 361.9 1.4e-99
XP_011516240 (OMIM: 208920,606350) PREDICTED: apra ( 254) 1727 344.0 2.2e-94
XP_011516241 (OMIM: 208920,606350) PREDICTED: apra ( 254) 1727 344.0 2.2e-94
XP_006716855 (OMIM: 208920,606350) PREDICTED: apra ( 254) 1727 344.0 2.2e-94
XP_016870326 (OMIM: 208920,606350) PREDICTED: apra ( 288) 1669 332.8 5.7e-91
NP_001182183 (OMIM: 208920,606350) aprataxin isofo ( 288) 1669 332.8 5.7e-91
NP_001182179 (OMIM: 208920,606350) aprataxin isofo ( 302) 1669 332.8 5.9e-91
XP_016870327 (OMIM: 208920,606350) PREDICTED: apra ( 204) 1372 275.3 8.4e-74
NP_001182181 (OMIM: 208920,606350) aprataxin isofo ( 284) 1248 251.4 1.8e-66
NP_009185 (OMIM: 605610,613402,616267) bifunctiona ( 521) 229 54.4 6.6e-07
NP_612638 (OMIM: 609998) histidine triad nucleotid ( 182) 192 47.0 4e-05
NP_005331 (OMIM: 137200,601314) histidine triad nu ( 126) 157 40.1 0.0032
>>NP_001182177 (OMIM: 208920,606350) aprataxin isoform e (356 aa)
initn: 2416 init1: 2416 opt: 2416 Z-score: 2533.8 bits: 477.4 E(85289): 2.2e-134
Smith-Waterman score: 2416; 100.0% identity (100.0% similar) in 356 aa overlap (1-356:1-356)
10 20 30 40 50 60
pF1KB6 MSNVNLSVSDFWRVMMRVCWLVRQDSRHQRIRLPHLEAVVIGRGPETKITDKKCSRQQVQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSNVNLSVSDFWRVMMRVCWLVRQDSRHQRIRLPHLEAVVIGRGPETKITDKKCSRQQVQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 LKAECNKGYVKVKQVGVNPTSIDSVVIGKDQEVKLQPGQVLHMVNELYPYIVEFEEEAKN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LKAECNKGYVKVKQVGVNPTSIDSVVIGKDQEVKLQPGQVLHMVNELYPYIVEFEEEAKN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 PGLETHRKRKRSGNSDSIERDAAQEAEAGTGLEPGSNSGQCSVPLKKGKDAPIKKESLGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PGLETHRKRKRSGNSDSIERDAAQEAEAGTGLEPGSNSGQCSVPLKKGKDAPIKKESLGH
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 WSQGLKISMQDPKMQVYKDEQVVVIKDKYPKARYHWLVLPWTSISSLKAVAREHLELLKH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 WSQGLKISMQDPKMQVYKDEQVVVIKDKYPKARYHWLVLPWTSISSLKAVAREHLELLKH
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 MHTVGEKVIVDFAGSSKLRFRLGYHAIPSMSHVHLHVISQDFDSPCLKNKKHWNSFNTEY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MHTVGEKVIVDFAGSSKLRFRLGYHAIPSMSHVHLHVISQDFDSPCLKNKKHWNSFNTEY
250 260 270 280 290 300
310 320 330 340 350
pF1KB6 FLESQAVIEMVQEAGRVTVRDGMPELLKLPLRCHECQQLLPSIPQLKEHLRKHWTQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FLESQAVIEMVQEAGRVTVRDGMPELLKLPLRCHECQQLLPSIPQLKEHLRKHWTQ
310 320 330 340 350
>>XP_006716854 (OMIM: 208920,606350) PREDICTED: aprataxi (342 aa)
initn: 2322 init1: 2322 opt: 2322 Z-score: 2435.7 bits: 459.2 E(85289): 6.2e-129
Smith-Waterman score: 2322; 100.0% identity (100.0% similar) in 342 aa overlap (15-356:1-342)
10 20 30 40 50 60
pF1KB6 MSNVNLSVSDFWRVMMRVCWLVRQDSRHQRIRLPHLEAVVIGRGPETKITDKKCSRQQVQ
::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MMRVCWLVRQDSRHQRIRLPHLEAVVIGRGPETKITDKKCSRQQVQ
10 20 30 40
70 80 90 100 110 120
pF1KB6 LKAECNKGYVKVKQVGVNPTSIDSVVIGKDQEVKLQPGQVLHMVNELYPYIVEFEEEAKN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 LKAECNKGYVKVKQVGVNPTSIDSVVIGKDQEVKLQPGQVLHMVNELYPYIVEFEEEAKN
50 60 70 80 90 100
130 140 150 160 170 180
pF1KB6 PGLETHRKRKRSGNSDSIERDAAQEAEAGTGLEPGSNSGQCSVPLKKGKDAPIKKESLGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 PGLETHRKRKRSGNSDSIERDAAQEAEAGTGLEPGSNSGQCSVPLKKGKDAPIKKESLGH
110 120 130 140 150 160
190 200 210 220 230 240
pF1KB6 WSQGLKISMQDPKMQVYKDEQVVVIKDKYPKARYHWLVLPWTSISSLKAVAREHLELLKH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 WSQGLKISMQDPKMQVYKDEQVVVIKDKYPKARYHWLVLPWTSISSLKAVAREHLELLKH
170 180 190 200 210 220
250 260 270 280 290 300
pF1KB6 MHTVGEKVIVDFAGSSKLRFRLGYHAIPSMSHVHLHVISQDFDSPCLKNKKHWNSFNTEY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MHTVGEKVIVDFAGSSKLRFRLGYHAIPSMSHVHLHVISQDFDSPCLKNKKHWNSFNTEY
230 240 250 260 270 280
310 320 330 340 350
pF1KB6 FLESQAVIEMVQEAGRVTVRDGMPELLKLPLRCHECQQLLPSIPQLKEHLRKHWTQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 FLESQAVIEMVQEAGRVTVRDGMPELLKLPLRCHECQQLLPSIPQLKEHLRKHWTQ
290 300 310 320 330 340
>>NP_778243 (OMIM: 208920,606350) aprataxin isoform a [H (342 aa)
initn: 2322 init1: 2322 opt: 2322 Z-score: 2435.7 bits: 459.2 E(85289): 6.2e-129
Smith-Waterman score: 2322; 100.0% identity (100.0% similar) in 342 aa overlap (15-356:1-342)
10 20 30 40 50 60
pF1KB6 MSNVNLSVSDFWRVMMRVCWLVRQDSRHQRIRLPHLEAVVIGRGPETKITDKKCSRQQVQ
::::::::::::::::::::::::::::::::::::::::::::::
NP_778 MMRVCWLVRQDSRHQRIRLPHLEAVVIGRGPETKITDKKCSRQQVQ
10 20 30 40
70 80 90 100 110 120
pF1KB6 LKAECNKGYVKVKQVGVNPTSIDSVVIGKDQEVKLQPGQVLHMVNELYPYIVEFEEEAKN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_778 LKAECNKGYVKVKQVGVNPTSIDSVVIGKDQEVKLQPGQVLHMVNELYPYIVEFEEEAKN
50 60 70 80 90 100
130 140 150 160 170 180
pF1KB6 PGLETHRKRKRSGNSDSIERDAAQEAEAGTGLEPGSNSGQCSVPLKKGKDAPIKKESLGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_778 PGLETHRKRKRSGNSDSIERDAAQEAEAGTGLEPGSNSGQCSVPLKKGKDAPIKKESLGH
110 120 130 140 150 160
190 200 210 220 230 240
pF1KB6 WSQGLKISMQDPKMQVYKDEQVVVIKDKYPKARYHWLVLPWTSISSLKAVAREHLELLKH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_778 WSQGLKISMQDPKMQVYKDEQVVVIKDKYPKARYHWLVLPWTSISSLKAVAREHLELLKH
170 180 190 200 210 220
250 260 270 280 290 300
pF1KB6 MHTVGEKVIVDFAGSSKLRFRLGYHAIPSMSHVHLHVISQDFDSPCLKNKKHWNSFNTEY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_778 MHTVGEKVIVDFAGSSKLRFRLGYHAIPSMSHVHLHVISQDFDSPCLKNKKHWNSFNTEY
230 240 250 260 270 280
310 320 330 340 350
pF1KB6 FLESQAVIEMVQEAGRVTVRDGMPELLKLPLRCHECQQLLPSIPQLKEHLRKHWTQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_778 FLESQAVIEMVQEAGRVTVRDGMPELLKLPLRCHECQQLLPSIPQLKEHLRKHWTQ
290 300 310 320 330 340
>>NP_001182178 (OMIM: 208920,606350) aprataxin isoform a (342 aa)
initn: 2322 init1: 2322 opt: 2322 Z-score: 2435.7 bits: 459.2 E(85289): 6.2e-129
Smith-Waterman score: 2322; 100.0% identity (100.0% similar) in 342 aa overlap (15-356:1-342)
10 20 30 40 50 60
pF1KB6 MSNVNLSVSDFWRVMMRVCWLVRQDSRHQRIRLPHLEAVVIGRGPETKITDKKCSRQQVQ
::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MMRVCWLVRQDSRHQRIRLPHLEAVVIGRGPETKITDKKCSRQQVQ
10 20 30 40
70 80 90 100 110 120
pF1KB6 LKAECNKGYVKVKQVGVNPTSIDSVVIGKDQEVKLQPGQVLHMVNELYPYIVEFEEEAKN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LKAECNKGYVKVKQVGVNPTSIDSVVIGKDQEVKLQPGQVLHMVNELYPYIVEFEEEAKN
50 60 70 80 90 100
130 140 150 160 170 180
pF1KB6 PGLETHRKRKRSGNSDSIERDAAQEAEAGTGLEPGSNSGQCSVPLKKGKDAPIKKESLGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PGLETHRKRKRSGNSDSIERDAAQEAEAGTGLEPGSNSGQCSVPLKKGKDAPIKKESLGH
110 120 130 140 150 160
190 200 210 220 230 240
pF1KB6 WSQGLKISMQDPKMQVYKDEQVVVIKDKYPKARYHWLVLPWTSISSLKAVAREHLELLKH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 WSQGLKISMQDPKMQVYKDEQVVVIKDKYPKARYHWLVLPWTSISSLKAVAREHLELLKH
170 180 190 200 210 220
250 260 270 280 290 300
pF1KB6 MHTVGEKVIVDFAGSSKLRFRLGYHAIPSMSHVHLHVISQDFDSPCLKNKKHWNSFNTEY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MHTVGEKVIVDFAGSSKLRFRLGYHAIPSMSHVHLHVISQDFDSPCLKNKKHWNSFNTEY
230 240 250 260 270 280
310 320 330 340 350
pF1KB6 FLESQAVIEMVQEAGRVTVRDGMPELLKLPLRCHECQQLLPSIPQLKEHLRKHWTQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FLESQAVIEMVQEAGRVTVRDGMPELLKLPLRCHECQQLLPSIPQLKEHLRKHWTQ
290 300 310 320 330 340
>>NP_778239 (OMIM: 208920,606350) aprataxin isoform b [H (306 aa)
initn: 2061 init1: 2061 opt: 2061 Z-score: 2163.6 bits: 408.7 E(85289): 8.9e-114
Smith-Waterman score: 2061; 100.0% identity (100.0% similar) in 305 aa overlap (1-305:1-305)
10 20 30 40 50 60
pF1KB6 MSNVNLSVSDFWRVMMRVCWLVRQDSRHQRIRLPHLEAVVIGRGPETKITDKKCSRQQVQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_778 MSNVNLSVSDFWRVMMRVCWLVRQDSRHQRIRLPHLEAVVIGRGPETKITDKKCSRQQVQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 LKAECNKGYVKVKQVGVNPTSIDSVVIGKDQEVKLQPGQVLHMVNELYPYIVEFEEEAKN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_778 LKAECNKGYVKVKQVGVNPTSIDSVVIGKDQEVKLQPGQVLHMVNELYPYIVEFEEEAKN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 PGLETHRKRKRSGNSDSIERDAAQEAEAGTGLEPGSNSGQCSVPLKKGKDAPIKKESLGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_778 PGLETHRKRKRSGNSDSIERDAAQEAEAGTGLEPGSNSGQCSVPLKKGKDAPIKKESLGH
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 WSQGLKISMQDPKMQVYKDEQVVVIKDKYPKARYHWLVLPWTSISSLKAVAREHLELLKH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_778 WSQGLKISMQDPKMQVYKDEQVVVIKDKYPKARYHWLVLPWTSISSLKAVAREHLELLKH
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 MHTVGEKVIVDFAGSSKLRFRLGYHAIPSMSHVHLHVISQDFDSPCLKNKKHWNSFNTEY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_778 MHTVGEKVIVDFAGSSKLRFRLGYHAIPSMSHVHLHVISQDFDSPCLKNKKHWNSFNTEY
250 260 270 280 290 300
310 320 330 340 350
pF1KB6 FLESQAVIEMVQEAGRVTVRDGMPELLKLPLRCHECQQLLPSIPQLKEHLRKHWTQ
:::::
NP_778 FLESQE
>>NP_001182180 (OMIM: 208920,606350) aprataxin isoform g (292 aa)
initn: 1967 init1: 1967 opt: 1967 Z-score: 2065.6 bits: 390.5 E(85289): 2.6e-108
Smith-Waterman score: 1967; 100.0% identity (100.0% similar) in 291 aa overlap (15-305:1-291)
10 20 30 40 50 60
pF1KB6 MSNVNLSVSDFWRVMMRVCWLVRQDSRHQRIRLPHLEAVVIGRGPETKITDKKCSRQQVQ
::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MMRVCWLVRQDSRHQRIRLPHLEAVVIGRGPETKITDKKCSRQQVQ
10 20 30 40
70 80 90 100 110 120
pF1KB6 LKAECNKGYVKVKQVGVNPTSIDSVVIGKDQEVKLQPGQVLHMVNELYPYIVEFEEEAKN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LKAECNKGYVKVKQVGVNPTSIDSVVIGKDQEVKLQPGQVLHMVNELYPYIVEFEEEAKN
50 60 70 80 90 100
130 140 150 160 170 180
pF1KB6 PGLETHRKRKRSGNSDSIERDAAQEAEAGTGLEPGSNSGQCSVPLKKGKDAPIKKESLGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PGLETHRKRKRSGNSDSIERDAAQEAEAGTGLEPGSNSGQCSVPLKKGKDAPIKKESLGH
110 120 130 140 150 160
190 200 210 220 230 240
pF1KB6 WSQGLKISMQDPKMQVYKDEQVVVIKDKYPKARYHWLVLPWTSISSLKAVAREHLELLKH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 WSQGLKISMQDPKMQVYKDEQVVVIKDKYPKARYHWLVLPWTSISSLKAVAREHLELLKH
170 180 190 200 210 220
250 260 270 280 290 300
pF1KB6 MHTVGEKVIVDFAGSSKLRFRLGYHAIPSMSHVHLHVISQDFDSPCLKNKKHWNSFNTEY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MHTVGEKVIVDFAGSSKLRFRLGYHAIPSMSHVHLHVISQDFDSPCLKNKKHWNSFNTEY
230 240 250 260 270 280
310 320 330 340 350
pF1KB6 FLESQAVIEMVQEAGRVTVRDGMPELLKLPLRCHECQQLLPSIPQLKEHLRKHWTQ
:::::
NP_001 FLESQE
290
>>XP_016870325 (OMIM: 208920,606350) PREDICTED: aprataxi (308 aa)
initn: 1819 init1: 1819 opt: 1819 Z-score: 1910.6 bits: 361.8 E(85289): 1.1e-99
Smith-Waterman score: 1819; 98.5% identity (99.6% similar) in 275 aa overlap (1-275:1-275)
10 20 30 40 50 60
pF1KB6 MSNVNLSVSDFWRVMMRVCWLVRQDSRHQRIRLPHLEAVVIGRGPETKITDKKCSRQQVQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MSNVNLSVSDFWRVMMRVCWLVRQDSRHQRIRLPHLEAVVIGRGPETKITDKKCSRQQVQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 LKAECNKGYVKVKQVGVNPTSIDSVVIGKDQEVKLQPGQVLHMVNELYPYIVEFEEEAKN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LKAECNKGYVKVKQVGVNPTSIDSVVIGKDQEVKLQPGQVLHMVNELYPYIVEFEEEAKN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 PGLETHRKRKRSGNSDSIERDAAQEAEAGTGLEPGSNSGQCSVPLKKGKDAPIKKESLGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PGLETHRKRKRSGNSDSIERDAAQEAEAGTGLEPGSNSGQCSVPLKKGKDAPIKKESLGH
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 WSQGLKISMQDPKMQVYKDEQVVVIKDKYPKARYHWLVLPWTSISSLKAVAREHLELLKH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 WSQGLKISMQDPKMQVYKDEQVVVIKDKYPKARYHWLVLPWTSISSLKAVAREHLELLKH
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 MHTVGEKVIVDFAGSSKLRFRLGYHAIPSMSHVHLHVISQDFDSPCLKNKKHWNSFNTEY
::::::::::::::::::::::::::::::: ...
XP_016 MHTVGEKVIVDFAGSSKLRFRLGYHAIPSMSSIRVFCGPPETGILQGQISRPNLLESEND
250 260 270 280 290 300
310 320 330 340 350
pF1KB6 FLESQAVIEMVQEAGRVTVRDGMPELLKLPLRCHECQQLLPSIPQLKEHLRKHWTQ
XP_016 TREVTTQQ
>>XP_016870324 (OMIM: 208920,606350) PREDICTED: aprataxi (315 aa)
initn: 1819 init1: 1819 opt: 1819 Z-score: 1910.4 bits: 361.8 E(85289): 1.1e-99
Smith-Waterman score: 1819; 98.5% identity (99.6% similar) in 275 aa overlap (1-275:1-275)
10 20 30 40 50 60
pF1KB6 MSNVNLSVSDFWRVMMRVCWLVRQDSRHQRIRLPHLEAVVIGRGPETKITDKKCSRQQVQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MSNVNLSVSDFWRVMMRVCWLVRQDSRHQRIRLPHLEAVVIGRGPETKITDKKCSRQQVQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 LKAECNKGYVKVKQVGVNPTSIDSVVIGKDQEVKLQPGQVLHMVNELYPYIVEFEEEAKN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LKAECNKGYVKVKQVGVNPTSIDSVVIGKDQEVKLQPGQVLHMVNELYPYIVEFEEEAKN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 PGLETHRKRKRSGNSDSIERDAAQEAEAGTGLEPGSNSGQCSVPLKKGKDAPIKKESLGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PGLETHRKRKRSGNSDSIERDAAQEAEAGTGLEPGSNSGQCSVPLKKGKDAPIKKESLGH
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 WSQGLKISMQDPKMQVYKDEQVVVIKDKYPKARYHWLVLPWTSISSLKAVAREHLELLKH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 WSQGLKISMQDPKMQVYKDEQVVVIKDKYPKARYHWLVLPWTSISSLKAVAREHLELLKH
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 MHTVGEKVIVDFAGSSKLRFRLGYHAIPSMSHVHLHVISQDFDSPCLKNKKHWNSFNTEY
::::::::::::::::::::::::::::::: ...
XP_016 MHTVGEKVIVDFAGSSKLRFRLGYHAIPSMSSIRVFCGPPETGILQGQISRPNLLESEND
250 260 270 280 290 300
310 320 330 340 350
pF1KB6 FLESQAVIEMVQEAGRVTVRDGMPELLKLPLRCHECQQLLPSIPQLKEHLRKHWTQ
XP_016 TREGKSGSSQVHPKF
310
>>XP_016870323 (OMIM: 208920,606350) PREDICTED: aprataxi (325 aa)
initn: 1819 init1: 1819 opt: 1819 Z-score: 1910.2 bits: 361.9 E(85289): 1.2e-99
Smith-Waterman score: 1819; 98.5% identity (99.6% similar) in 275 aa overlap (1-275:1-275)
10 20 30 40 50 60
pF1KB6 MSNVNLSVSDFWRVMMRVCWLVRQDSRHQRIRLPHLEAVVIGRGPETKITDKKCSRQQVQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MSNVNLSVSDFWRVMMRVCWLVRQDSRHQRIRLPHLEAVVIGRGPETKITDKKCSRQQVQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 LKAECNKGYVKVKQVGVNPTSIDSVVIGKDQEVKLQPGQVLHMVNELYPYIVEFEEEAKN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LKAECNKGYVKVKQVGVNPTSIDSVVIGKDQEVKLQPGQVLHMVNELYPYIVEFEEEAKN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 PGLETHRKRKRSGNSDSIERDAAQEAEAGTGLEPGSNSGQCSVPLKKGKDAPIKKESLGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PGLETHRKRKRSGNSDSIERDAAQEAEAGTGLEPGSNSGQCSVPLKKGKDAPIKKESLGH
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 WSQGLKISMQDPKMQVYKDEQVVVIKDKYPKARYHWLVLPWTSISSLKAVAREHLELLKH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 WSQGLKISMQDPKMQVYKDEQVVVIKDKYPKARYHWLVLPWTSISSLKAVAREHLELLKH
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 MHTVGEKVIVDFAGSSKLRFRLGYHAIPSMSHVHLHVISQDFDSPCLKNKKHWNSFNTEY
::::::::::::::::::::::::::::::: ...
XP_016 MHTVGEKVIVDFAGSSKLRFRLGYHAIPSMSSIRVFCGPPETGILQGQISRPNLLESEND
250 260 270 280 290 300
310 320 330 340 350
pF1KB6 FLESQAVIEMVQEAGRVTVRDGMPELLKLPLRCHECQQLLPSIPQLKEHLRKHWTQ
XP_016 TREAATSWICAEDTHRSWGSQSNNA
310 320
>>XP_016870322 (OMIM: 208920,606350) PREDICTED: aprataxi (338 aa)
initn: 1819 init1: 1819 opt: 1819 Z-score: 1910.0 bits: 361.9 E(85289): 1.2e-99
Smith-Waterman score: 1819; 98.5% identity (99.6% similar) in 275 aa overlap (1-275:1-275)
10 20 30 40 50 60
pF1KB6 MSNVNLSVSDFWRVMMRVCWLVRQDSRHQRIRLPHLEAVVIGRGPETKITDKKCSRQQVQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MSNVNLSVSDFWRVMMRVCWLVRQDSRHQRIRLPHLEAVVIGRGPETKITDKKCSRQQVQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 LKAECNKGYVKVKQVGVNPTSIDSVVIGKDQEVKLQPGQVLHMVNELYPYIVEFEEEAKN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LKAECNKGYVKVKQVGVNPTSIDSVVIGKDQEVKLQPGQVLHMVNELYPYIVEFEEEAKN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 PGLETHRKRKRSGNSDSIERDAAQEAEAGTGLEPGSNSGQCSVPLKKGKDAPIKKESLGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PGLETHRKRKRSGNSDSIERDAAQEAEAGTGLEPGSNSGQCSVPLKKGKDAPIKKESLGH
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 WSQGLKISMQDPKMQVYKDEQVVVIKDKYPKARYHWLVLPWTSISSLKAVAREHLELLKH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 WSQGLKISMQDPKMQVYKDEQVVVIKDKYPKARYHWLVLPWTSISSLKAVAREHLELLKH
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 MHTVGEKVIVDFAGSSKLRFRLGYHAIPSMSHVHLHVISQDFDSPCLKNKKHWNSFNTEY
::::::::::::::::::::::::::::::: ...
XP_016 MHTVGEKVIVDFAGSSKLRFRLGYHAIPSMSSIRVFCGPPETGILQGQISRPNLLESEND
250 260 270 280 290 300
310 320 330 340 350
pF1KB6 FLESQAVIEMVQEAGRVTVRDGMPELLKLPLRCHECQQLLPSIPQLKEHLRKHWTQ
XP_016 TREGHFGKVGRCKINIQKAPTSLRISTPHRSCPHPSLR
310 320 330
356 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 04:07:53 2016 done: Sat Nov 5 04:07:54 2016
Total Scan time: 7.800 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]