Result of FASTA (omim) for
pF1KB6483
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB6483, 328 aa
1>>>pF1KB6483 328 - 328 aa - 328 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.9253+/-0.000351; mu= 19.5033+/- 0.022
mean_var=87.8890+/-17.303, 0's: 0 Z-trim(117.2): 57 B-trim: 957 in 2/54
Lambda= 0.136807
statistics sampled from 28980 (29040) to 28980 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.713), E-opt: 0.2 (0.34), width: 16
Scan time: 8.150
The best scores are: opt bits E(85289)
NP_002892 (OMIM: 602735) reticulocalbin-1 precurso ( 331) 1217 249.8 5.8e-66
NP_001124146 (OMIM: 603420) calumenin isoform b pr ( 315) 1118 230.3 4.3e-60
NP_001186601 (OMIM: 603420) calumenin isoform d pr ( 323) 1118 230.3 4.3e-60
NP_001210 (OMIM: 603420) calumenin isoform a precu ( 315) 1098 226.3 6.6e-59
NP_001186600 (OMIM: 603420) calumenin isoform c pr ( 323) 1098 226.3 6.7e-59
NP_001186602 (OMIM: 603420) calumenin isoform e pr ( 224) 723 152.1 1e-36
XP_016868148 (OMIM: 603420) PREDICTED: calumenin i ( 164) 684 144.3 1.7e-34
NP_002893 (OMIM: 602584) reticulocalbin-2 isoform ( 317) 605 129.0 1.3e-29
NP_001258766 (OMIM: 602584) reticulocalbin-2 isofo ( 335) 425 93.5 6.6e-19
NP_057260 (OMIM: 614282) 45 kDa calcium-binding pr ( 362) 248 58.6 2.3e-08
NP_057631 (OMIM: 614282) 45 kDa calcium-binding pr ( 348) 185 46.2 0.00012
>>NP_002892 (OMIM: 602735) reticulocalbin-1 precursor [H (331 aa)
initn: 1227 init1: 811 opt: 1217 Z-score: 1305.3 bits: 249.8 E(85289): 5.8e-66
Smith-Waterman score: 1217; 55.7% identity (78.6% similar) in 323 aa overlap (7-328:16-331)
10 20 30 40 50
pF1KB6 MMWRPSVLLLLLLLRHGAQGKPSPDAGPHGQGRVHQAAPLSDAPHDDAHGN
.:: :.: . ..::. . . :. . :.. : .: . .
NP_002 MARGGRGRRLGLALGLLLALVLAPRVLRAKPTV----RKERVVRPDSELGERPPEDNQ-S
10 20 30 40 50
60 70 80 90 100 110
pF1KB6 FQYDHEAFLGREVAKEFDQLTPEESQARLGRIVDRMDRAGDGDGWVSLAELRAWIAHTQQ
::::::::::.: .: ::::::.::. :::.::::.: .::::.:. ::..:: ..:.
NP_002 FQYDHEAFLGKEDSKTFDQLTPDESKERLGKIVDRID--NDGDGFVTTEELKTWIKRVQK
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB6 RHIRDSVSAAWDTYDTDRDGRVGWEELRNATYGHYAPGE-EFHDVEDAETYKKMLARDER
:.: :.:. .: :: :.: ...::: ..::::.: . :::: : .:.:::: ::::
NP_002 RYIFDNVAKVWKDYDRDKDDKISWEEYKQATYGYYLGNPAEFHDSSDHHTFKKMLPRDER
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB6 RFRVADQDGDSMATREELTAFLHPEEFPHMRDIVIAETLEDLDRNKDGYVQVEEYIADLY
::..:: .:: :::::.::::::::: ::..::. :::::.:.: ::.:. .:::::..
NP_002 RFKAADLNGDLTATREEFTAFLHPEEFEHMKEIVVLETLEDIDKNGDGFVDQDEYIADMF
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB6 SAEPGEEEPAWVQTERQQFRDFRDLNKDGHLDGSEVGHWVLPPAQDQPLVEANHLLHESD
: : . :: :: .::.:: .::::::::.:: .:. ::.:: :. .:: ::..:::
NP_002 SHEENGPEPDWVLSEREQFNEFRDLNKDGKLDKDEIRHWILPQDYDHAQAEARHLVYESD
240 250 260 270 280 290
300 310 320
pF1KB6 TDKDGRLSKAEILGNWNMFVGSQATNYGEDLTRHHDEL
.:: .:.: ::: ::::::::::::::::::..::::
NP_002 KNKDEKLTKEEILENWNMFVGSQATNYGEDLTKNHDEL
300 310 320 330
>>NP_001124146 (OMIM: 603420) calumenin isoform b precur (315 aa)
initn: 1024 init1: 698 opt: 1118 Z-score: 1199.9 bits: 230.3 E(85289): 4.3e-60
Smith-Waterman score: 1121; 50.8% identity (76.9% similar) in 321 aa overlap (8-328:7-315)
10 20 30 40 50 60
pF1KB6 MMWRPSVLLLLLLLRHGAQGKPSPDAGPHGQGRVHQAAPLSDAPHDDAHGNFQYDHEAFL
:. : : : .::. . :::. ::: :.::. .:.:::.:::
NP_001 MDLRQFLMCLSLCTAFALSKPTEK-----KDRVHHEPQLSDKVHNDAQ-SFDYDHDAFL
10 20 30 40 50
70 80 90 100 110 120
pF1KB6 GREVAKEFDQLTPEESQARLGRIVDRMDRAGDGDGWVSLAELRAWIAHTQQRHIRDSVSA
: : :: :::::::::. ::: :::..: .: ::.:. .::..:: :.:...: :.:
NP_001 GAEEAKTFDQLTPEESKERLGMIVDKID--ADKDGFVTEGELKSWIKHAQKKYIYDNVEN
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB6 AWDTYDTDRDGRVGWEELRNATYGHYAPGEEFHDVEDAETYKKMLARDERRFRVADQDGD
:. .: ..:: ..:.: ::.::: : : .:. .::.:..::::::..::.:::
NP_001 QWQEFDMNQDGLISWDEYRNVTYGTYLDDP---DPDDGFNYKQMMVRDERRFKMADKDGD
120 130 140 150 160
190 200 210 220 230 240
pF1KB6 SMATREELTAFLHPEEFPHMRDIVIAETLEDLDRNKDGYVQVEEYIADLYSAEPGEEEPA
.::.::.::::::::. .:.:::. ::.::.:.: ::....::::.:.:: . . .::
NP_001 LIATKEEFTAFLHPEEYDYMKDIVVQETMEDIDKNADGFIDLEEYIGDMYSHDGNTDEPE
170 180 190 200 210 220
250 260 270 280 290 300
pF1KB6 WVQTERQQFRDFRDLNKDGHLDGSEVGHWVLPPAQDQPLVEANHLLHESDTDKDGRLSKA
::.:::.:: .::: :.::..: :. :.:: :. .:: ::..::: .:::.:.:
NP_001 WVKTEREQFVEFRDKNRDGKMDKEETKDWILPSDYDHAEAEARHLVYESDQNKDGKLTKE
230 240 250 260 270 280
310 320
pF1KB6 EILGNWNMFVGSQATNYGEDLTRHHDEL
::. ....:::::::..:: :.:: ::.
NP_001 EIVDKYDLFVGSQATDFGEALVRH-DEF
290 300 310
>>NP_001186601 (OMIM: 603420) calumenin isoform d precur (323 aa)
initn: 1024 init1: 698 opt: 1118 Z-score: 1199.8 bits: 230.3 E(85289): 4.3e-60
Smith-Waterman score: 1121; 50.8% identity (76.9% similar) in 321 aa overlap (8-328:15-323)
10 20 30 40 50
pF1KB6 MMWRPSVLLLLLLLRHGAQGKPSPDAGPHGQGRVHQAAPLSDAPHDDAHGNFQ
:. : : : .::. . :::. ::: :.::. .:.
NP_001 MKETDLIIMDLRQFLMCLSLCTAFALSKPTEK-----KDRVHHEPQLSDKVHNDAQ-SFD
10 20 30 40 50
60 70 80 90 100 110
pF1KB6 YDHEAFLGREVAKEFDQLTPEESQARLGRIVDRMDRAGDGDGWVSLAELRAWIAHTQQRH
:::.:::: : :: :::::::::. ::: :::..: .: ::.:. .::..:: :.:...
NP_001 YDHDAFLGAEEAKTFDQLTPEESKERLGMIVDKID--ADKDGFVTEGELKSWIKHAQKKY
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB6 IRDSVSAAWDTYDTDRDGRVGWEELRNATYGHYAPGEEFHDVEDAETYKKMLARDERRFR
: :.: :. .: ..:: ..:.: ::.::: : : .:. .::.:..::::::.
NP_001 IYDNVENQWQEFDMNQDGLISWDEYRNVTYGTYLDDP---DPDDGFNYKQMMVRDERRFK
120 130 140 150 160
180 190 200 210 220 230
pF1KB6 VADQDGDSMATREELTAFLHPEEFPHMRDIVIAETLEDLDRNKDGYVQVEEYIADLYSAE
.::.::: .::.::.::::::::. .:.:::. ::.::.:.: ::....::::.:.:: .
NP_001 MADKDGDLIATKEEFTAFLHPEEYDYMKDIVVQETMEDIDKNADGFIDLEEYIGDMYSHD
170 180 190 200 210 220
240 250 260 270 280 290
pF1KB6 PGEEEPAWVQTERQQFRDFRDLNKDGHLDGSEVGHWVLPPAQDQPLVEANHLLHESDTDK
. .:: ::.:::.:: .::: :.::..: :. :.:: :. .:: ::..::: .:
NP_001 GNTDEPEWVKTEREQFVEFRDKNRDGKMDKEETKDWILPSDYDHAEAEARHLVYESDQNK
230 240 250 260 270 280
300 310 320
pF1KB6 DGRLSKAEILGNWNMFVGSQATNYGEDLTRHHDEL
::.:.: ::. ....:::::::..:: :.:: ::.
NP_001 DGKLTKEEIVDKYDLFVGSQATDFGEALVRH-DEF
290 300 310 320
>>NP_001210 (OMIM: 603420) calumenin isoform a precursor (315 aa)
initn: 995 init1: 698 opt: 1098 Z-score: 1178.6 bits: 226.3 E(85289): 6.6e-59
Smith-Waterman score: 1101; 50.8% identity (76.0% similar) in 321 aa overlap (8-328:7-315)
10 20 30 40 50 60
pF1KB6 MMWRPSVLLLLLLLRHGAQGKPSPDAGPHGQGRVHQAAPLSDAPHDDAHGNFQYDHEAFL
:. : : : .::. . :::. ::: :.::. .:.:::.:::
NP_001 MDLRQFLMCLSLCTAFALSKPTEK-----KDRVHHEPQLSDKVHNDAQ-SFDYDHDAFL
10 20 30 40 50
70 80 90 100 110 120
pF1KB6 GREVAKEFDQLTPEESQARLGRIVDRMDRAGDGDGWVSLAELRAWIAHTQQRHIRDSVSA
: : :: :::::::::. :::.::...: :: ::.:.. ::. :: .:.: : ..:
NP_001 GAEEAKTFDQLTPEESKERLGKIVSKID--GDKDGFVTVDELKDWIKFAQKRWIYEDVER
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB6 AWDTYDTDRDGRVGWEELRNATYGHYAPGEEFHDVEDAETYKKMLARDERRFRVADQDGD
: .: ..:: :.::: .:::::. : .:. .::.:..::::::..::.:::
NP_001 QWKGHDLNEDGLVSWEEYKNATYGYVLDDP---DPDDGFNYKQMMVRDERRFKMADKDGD
120 130 140 150 160
190 200 210 220 230 240
pF1KB6 SMATREELTAFLHPEEFPHMRDIVIAETLEDLDRNKDGYVQVEEYIADLYSAEPGEEEPA
.::.::.::::::::. .:.:::. ::.::.:.: ::....::::.:.:: . . .::
NP_001 LIATKEEFTAFLHPEEYDYMKDIVVQETMEDIDKNADGFIDLEEYIGDMYSHDGNTDEPE
170 180 190 200 210 220
250 260 270 280 290 300
pF1KB6 WVQTERQQFRDFRDLNKDGHLDGSEVGHWVLPPAQDQPLVEANHLLHESDTDKDGRLSKA
::.:::.:: .::: :.::..: :. :.:: :. .:: ::..::: .:::.:.:
NP_001 WVKTEREQFVEFRDKNRDGKMDKEETKDWILPSDYDHAEAEARHLVYESDQNKDGKLTKE
230 240 250 260 270 280
310 320
pF1KB6 EILGNWNMFVGSQATNYGEDLTRHHDEL
::. ....:::::::..:: :.:: ::.
NP_001 EIVDKYDLFVGSQATDFGEALVRH-DEF
290 300 310
>>NP_001186600 (OMIM: 603420) calumenin isoform c precur (323 aa)
initn: 995 init1: 698 opt: 1098 Z-score: 1178.5 bits: 226.3 E(85289): 6.7e-59
Smith-Waterman score: 1101; 50.8% identity (76.0% similar) in 321 aa overlap (8-328:15-323)
10 20 30 40 50
pF1KB6 MMWRPSVLLLLLLLRHGAQGKPSPDAGPHGQGRVHQAAPLSDAPHDDAHGNFQ
:. : : : .::. . :::. ::: :.::. .:.
NP_001 MKETDLIIMDLRQFLMCLSLCTAFALSKPTEK-----KDRVHHEPQLSDKVHNDAQ-SFD
10 20 30 40 50
60 70 80 90 100 110
pF1KB6 YDHEAFLGREVAKEFDQLTPEESQARLGRIVDRMDRAGDGDGWVSLAELRAWIAHTQQRH
:::.:::: : :: :::::::::. :::.::...: :: ::.:.. ::. :: .:.:
NP_001 YDHDAFLGAEEAKTFDQLTPEESKERLGKIVSKID--GDKDGFVTVDELKDWIKFAQKRW
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB6 IRDSVSAAWDTYDTDRDGRVGWEELRNATYGHYAPGEEFHDVEDAETYKKMLARDERRFR
: ..: : .: ..:: :.::: .:::::. : .:. .::.:..::::::.
NP_001 IYEDVERQWKGHDLNEDGLVSWEEYKNATYGYVLDDP---DPDDGFNYKQMMVRDERRFK
120 130 140 150 160
180 190 200 210 220 230
pF1KB6 VADQDGDSMATREELTAFLHPEEFPHMRDIVIAETLEDLDRNKDGYVQVEEYIADLYSAE
.::.::: .::.::.::::::::. .:.:::. ::.::.:.: ::....::::.:.:: .
NP_001 MADKDGDLIATKEEFTAFLHPEEYDYMKDIVVQETMEDIDKNADGFIDLEEYIGDMYSHD
170 180 190 200 210 220
240 250 260 270 280 290
pF1KB6 PGEEEPAWVQTERQQFRDFRDLNKDGHLDGSEVGHWVLPPAQDQPLVEANHLLHESDTDK
. .:: ::.:::.:: .::: :.::..: :. :.:: :. .:: ::..::: .:
NP_001 GNTDEPEWVKTEREQFVEFRDKNRDGKMDKEETKDWILPSDYDHAEAEARHLVYESDQNK
230 240 250 260 270 280
300 310 320
pF1KB6 DGRLSKAEILGNWNMFVGSQATNYGEDLTRHHDEL
::.:.: ::. ....:::::::..:: :.:: ::.
NP_001 DGKLTKEEIVDKYDLFVGSQATDFGEALVRH-DEF
290 300 310 320
>>NP_001186602 (OMIM: 603420) calumenin isoform e precur (224 aa)
initn: 737 init1: 337 opt: 723 Z-score: 780.4 bits: 152.1 E(85289): 1e-36
Smith-Waterman score: 726; 50.7% identity (74.4% similar) in 219 aa overlap (8-226:7-214)
10 20 30 40 50 60
pF1KB6 MMWRPSVLLLLLLLRHGAQGKPSPDAGPHGQGRVHQAAPLSDAPHDDAHGNFQYDHEAFL
:. : : : .::. . :::. ::: :.::. .:.:::.:::
NP_001 MDLRQFLMCLSLCTAFALSKPTEK-----KDRVHHEPQLSDKVHNDAQ-SFDYDHDAFL
10 20 30 40 50
70 80 90 100 110 120
pF1KB6 GREVAKEFDQLTPEESQARLGRIVDRMDRAGDGDGWVSLAELRAWIAHTQQRHIRDSVSA
: : :: :::::::::. :::.::...: :: ::.:.. ::. :: .:.: : ..:
NP_001 GAEEAKTFDQLTPEESKERLGKIVSKID--GDKDGFVTVDELKDWIKFAQKRWIYEDVER
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB6 AWDTYDTDRDGRVGWEELRNATYGHYAPGEEFHDVEDAETYKKMLARDERRFRVADQDGD
: .: ..:: :.::: .:::::. : .:. .::.:..::::::..::.:::
NP_001 QWKGHDLNEDGLVSWEEYKNATYGYVLDDP---DPDDGFNYKQMMVRDERRFKMADKDGD
120 130 140 150 160
190 200 210 220 230 240
pF1KB6 SMATREELTAFLHPEEFPHMRDIVIAETLEDLDRNKDGYVQVEEYIADLYSAEPGEEEPA
.::.::.::::::::. .:.:::. ::.::.:.: ::....::::
NP_001 LIATKEEFTAFLHPEEYDYMKDIVVQETMEDIDKNADGFIDLEEYIGWQAYQGGDR
170 180 190 200 210 220
250 260 270 280 290 300
pF1KB6 WVQTERQQFRDFRDLNKDGHLDGSEVGHWVLPPAQDQPLVEANHLLHESDTDKDGRLSKA
>>XP_016868148 (OMIM: 603420) PREDICTED: calumenin isofo (164 aa)
initn: 795 init1: 672 opt: 684 Z-score: 740.4 bits: 144.3 E(85289): 1.7e-34
Smith-Waterman score: 684; 55.8% identity (84.8% similar) in 165 aa overlap (164-328:1-164)
140 150 160 170 180 190
pF1KB6 GWEELRNATYGHYAPGEEFHDVEDAETYKKMLARDERRFRVADQDGDSMATREELTAFLH
:..::::::..::.::: .::.::.:::::
XP_016 MMVRDERRFKMADKDGDLIATKEEFTAFLH
10 20 30
200 210 220 230 240 250
pF1KB6 PEEFPHMRDIVIAETLEDLDRNKDGYVQVEEYIADLYSAEPGEEEPAWVQTERQQFRDFR
:::. .:.:::. ::.::.:.: ::....::::.:.:: . . .:: ::.:::.:: .::
XP_016 PEEYDYMKDIVVQETMEDIDKNADGFIDLEEYIGDMYSHDGNTDEPEWVKTEREQFVEFR
40 50 60 70 80 90
260 270 280 290 300 310
pF1KB6 DLNKDGHLDGSEVGHWVLPPAQDQPLVEANHLLHESDTDKDGRLSKAEILGNWNMFVGSQ
: :.::..: :. :.:: :. .:: ::..::: .:::.:.: ::. ....:::::
XP_016 DKNRDGKMDKEETKDWILPSDYDHAEAEARHLVYESDQNKDGKLTKEEIVDKYDLFVGSQ
100 110 120 130 140 150
320
pF1KB6 ATNYGEDLTRHHDEL
::..:: :.:: ::.
XP_016 ATDFGEALVRH-DEF
160
>>NP_002893 (OMIM: 602584) reticulocalbin-2 isoform a pr (317 aa)
initn: 580 init1: 397 opt: 605 Z-score: 652.7 bits: 129.0 E(85289): 1.3e-29
Smith-Waterman score: 605; 35.4% identity (64.0% similar) in 311 aa overlap (26-328:17-317)
10 20 30 40 50
pF1KB6 MMWRPSVLLLLLLLRHGAQGKPSPDAGPHGQGRVHQAA-PLSDAPHDDAHGNFQYDHEAF
:. : :.... ::.. : ::.::.
NP_002 MRLGPRTAALGLLLLCAAAAGAGKAEELHYPLGERRSD-------YDREAL
10 20 30 40
60 70 80 90 100 110
pF1KB6 LG-REVAKEFDQLTPEESQARLGRIVDRMDRAGDGDGWVSLAELRAWIAHTQQRHIRDSV
:: .: . :. .: ::.: :: :. ..: :.::... .:: .:: . ... . .
NP_002 LGVQEDVDEYVKLGHEEQQKRLQAIIKKIDL--DSDGFLTESELSSWIQMSFKHYAMQEA
50 60 70 80 90 100
120 130 140 150 160 170
pF1KB6 SAAWDTYDTDRDGRVGWEELRNATYGHYAPGEEFHDVEDAE--TYKKMLARDERRFRVAD
. . :: . : : :.: : . .: ..::: ...:. .:..::. :.
NP_002 KQQFVEYDKNSDDTVTWDEYNIQMYDRVIDFDENTALDDAEEESFRKLHLKDKKRFEKAN
110 120 130 140 150 160
180 190 200 210 220 230
pF1KB6 QDGDSMATREELTAFLHPEEFPHMRDIVIAETLEDLDRNKDGYVQVEEYIADLYSAEP-G
::. . ::. :: :::: .: ..:: :.::. :.: ::.:..::...: : .: .
NP_002 QDSGPGLSLEEFIAFEHPEEVDYMTEFVIQEALEEHDKNGDGFVSLEEFLGD-YRWDPTA
170 180 190 200 210 220
240 250 260 270 280 290
pF1KB6 EEEPAWVQTERQQFRDFRDLNKDGHLDGSEVGHWVLPPAQDQPLVEANHLLHESDTDKDG
.:.: :. .:...: . : ..::.:: .:. ::.: : :: ::. : : . :
NP_002 NEDPEWILVEKDRFVNDYDKDNDGRLDPQELLPWVVPNNQGIAQEEALHLIDEMDLNGDK
230 240 250 260 270 280
300 310 320
pF1KB6 RLSKAEILGNWNMFVGSQATNYGEDLTR---HHDEL
.::. ::: : ..:. :.::.::..: .::::
NP_002 KLSEEEILENPDLFLTSEATDYGRQLHDDYFYHDEL
290 300 310
>>NP_001258766 (OMIM: 602584) reticulocalbin-2 isoform b (335 aa)
initn: 580 init1: 397 opt: 425 Z-score: 460.4 bits: 93.5 E(85289): 6.6e-19
Smith-Waterman score: 565; 33.7% identity (60.8% similar) in 329 aa overlap (26-328:17-335)
10 20 30 40 50
pF1KB6 MMWRPSVLLLLLLLRHGAQGKPSPDAGPHGQGRVHQAA-PLSDAPHDDAHGNFQYDHEAF
:. : :.... ::.. : ::.::.
NP_001 MRLGPRTAALGLLLLCAAAAGAGKAEELHYPLGERRSD-------YDREAL
10 20 30 40
60 70 80 90 100 110
pF1KB6 LG-REVAKEFDQLTPEESQARLGRIVDRMDRAGDGDGWVSLAELRAWIAHTQQRHIRDSV
:: .: . :. .: ::.: :: :. ..: :.::... .:: .:: . ... . .
NP_001 LGVQEDVDEYVKLGHEEQQKRLQAIIKKIDL--DSDGFLTESELSSWIQMSFKHYAMQEA
50 60 70 80 90 100
120 130 140 150 160
pF1KB6 SAAWDTYDTDRDGRVGWEELRNATYGHYAPGEEFHDVEDAE--TYKKMLA----------
. . :: . : : :.: : . .: ..::: ...: .:
NP_001 KQQFVEYDKNSDDTVTWDEYNIQMYDRVIDFDENTALDDAEEESFRKEFAICKKQSFCFW
110 120 130 140 150 160
170 180 190 200 210
pF1KB6 --------RDERRFRVADQDGDSMATREELTAFLHPEEFPHMRDIVIAETLEDLDRNKDG
.:..::. :.::. . ::. :: :::: .: ..:: :.::. :.: ::
NP_001 LLRFNLHLKDKKRFEKANQDSGPGLSLEEFIAFEHPEEVDYMTEFVIQEALEEHDKNGDG
170 180 190 200 210 220
220 230 240 250 260 270
pF1KB6 YVQVEEYIADLYSAEP-GEEEPAWVQTERQQFRDFRDLNKDGHLDGSEVGHWVLPPAQDQ
.:..::...: : .: ..:.: :. .:...: . : ..::.:: .:. ::.: :
NP_001 FVSLEEFLGD-YRWDPTANEDPEWILVEKDRFVNDYDKDNDGRLDPQELLPWVVPNNQGI
230 240 250 260 270 280
280 290 300 310 320
pF1KB6 PLVEANHLLHESDTDKDGRLSKAEILGNWNMFVGSQATNYGEDLTR---HHDEL
:: ::. : : . : .::. ::: : ..:. :.::.::..: .::::
NP_001 AQEEALHLIDEMDLNGDKKLSEEEILENPDLFLTSEATDYGRQLHDDYFYHDEL
290 300 310 320 330
>>NP_057260 (OMIM: 614282) 45 kDa calcium-binding protei (362 aa)
initn: 136 init1: 122 opt: 248 Z-score: 271.2 bits: 58.6 E(85289): 2.3e-08
Smith-Waterman score: 359; 25.6% identity (59.5% similar) in 301 aa overlap (47-328:70-362)
20 30 40 50 60 70
pF1KB6 GAQGKPSPDAGPHGQGRVHQAAPLSDAPHDDAHGNFQYDHEAFLGREVAKEFDQ-LTPEE
:.: : . .:.:::.... ::. :..
NP_057 NHSSTRERVANREENEILPPDHLNGVKLEMDGHLNRGFHQEVFLGKDLGG-FDEDAEPRR
40 50 60 70 80 90
80 90 100 110 120 130
pF1KB6 SQARLGRIVDRMDRAGDGDGWVSLAELRAWIAHTQQRHIRDSVSAAWDTY---DTDRDGR
:. .: : ...: . : .: :.. :: . .:..... . . : : ::.
NP_057 SRRKLMVIFSKVDV--NTDRKISAKEMQRWIMEKTAEHFQEAMEESKTHFRAVDPDGDGH
100 110 120 130 140 150
140 150 160 170 180
pF1KB6 VGWEELRN---ATYGHYAPGEEFHDV--------EDAETYKKMLARDERRFRVADQDGDS
:.:.: . :. :: .: :. : :: . . .: ... . .:
NP_057 VSWDEYKVKFLASKGHSE--KEVADAIRLNEELKVDEETQEVLENLKDRWYQADSPPADL
160 170 180 190 200 210
190 200 210 220 230
pF1KB6 MATREELTAFLHPEEFPHMRDIVIAETLEDLDRNKDGYVQVEEYIA---DLYSAEPGEE-
. :.::. .:::::. : ... : ..:::.. : ..: :.:. . :..
NP_057 LLTEEEFLSFLHPEHSRGMLRFMVKEIVRDLDQDGDKQLSVPEFISLPVGTVENQQGQDI
220 230 240 250 260 270
240 250 260 270 280 290
pF1KB6 EPAWVQTERQQFRDFRDLNKDGHLDGSEVGHWVLPPAQDQPLVEANHLLHESDTDKDGRL
. ::. ....:... : :.:: . . :. .. : . . : ::.... .: ... .:
NP_057 DDNWVKDRKKEFEELIDSNHDGIVTAEELESYMDPMNEYNALNEAKQMIAVADENQNHHL
280 290 300 310 320 330
300 310 320
pF1KB6 SKAEILGNWNMFVGSQATNYGEDLTRHHDEL
:.: ..:.::. ..:.... :.:.
NP_057 EPEEVLKYSEFFTGSKLVDYARSV---HEEF
340 350 360
328 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 17:13:44 2016 done: Fri Nov 4 17:13:45 2016
Total Scan time: 8.150 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]