Result of FASTA (omim) for
pF1KB6417
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB6417, 309 aa
1>>>pF1KB6417 309 - 309 aa - 309 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.0036+/-0.000291; mu= 13.5517+/- 0.018
mean_var=94.3853+/-18.864, 0's: 0 Z-trim(120.0): 87 B-trim: 464 in 2/51
Lambda= 0.132015
statistics sampled from 34566 (34664) to 34566 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.758), E-opt: 0.2 (0.406), width: 16
Scan time: 8.320
The best scores are: opt bits E(85289)
NP_002459 (OMIM: 153600,602170,612260) myeloid dif ( 309) 2073 404.4 1.5e-112
NP_001166038 (OMIM: 153600,602170,612260) myeloid ( 317) 2047 399.4 4.9e-111
XP_005265229 (OMIM: 153600,602170,612260) PREDICTE ( 258) 1479 291.2 1.5e-78
NP_001166040 (OMIM: 153600,602170,612260) myeloid ( 204) 1091 217.2 2.2e-56
NP_001166039 (OMIM: 153600,602170,612260) myeloid ( 264) 995 199.0 8.7e-51
NP_001166037 (OMIM: 153600,602170,612260) myeloid ( 159) 796 160.9 1.5e-39
XP_006713233 (OMIM: 153600,602170,612260) PREDICTE ( 213) 796 161.0 1.9e-39
XP_016872651 (OMIM: 606252,607948,610799,611162,61 ( 221) 191 45.8 9.4e-05
NP_001305706 (OMIM: 606252,607948,610799,611162,61 ( 221) 191 45.8 9.4e-05
NP_001034750 (OMIM: 606252,607948,610799,611162,61 ( 221) 191 45.8 9.4e-05
XP_011540878 (OMIM: 606252,607948,610799,611162,61 ( 221) 191 45.8 9.4e-05
NP_001305705 (OMIM: 606252,607948,610799,611162,61 ( 235) 191 45.8 9.9e-05
NP_683708 (OMIM: 606252,607948,610799,611162,61438 ( 235) 191 45.8 9.9e-05
XP_005271456 (OMIM: 606252,607948,610799,611162,61 ( 235) 191 45.8 9.9e-05
XP_016872650 (OMIM: 606252,607948,610799,611162,61 ( 277) 191 45.9 0.00011
NP_001161403 (OMIM: 602626) interleukin-1 receptor ( 687) 190 46.0 0.00026
NP_612567 (OMIM: 603030,611488) toll-like receptor ( 639) 185 45.0 0.00048
NP_003257 (OMIM: 603030,611488) toll-like receptor ( 799) 185 45.1 0.00058
NP_612564 (OMIM: 603030,611488) toll-like receptor ( 839) 185 45.1 0.0006
XP_016864062 (OMIM: 246300,603028,607948) PREDICTE ( 784) 183 44.7 0.00074
NP_001305719 (OMIM: 246300,603028,607948) toll-lik ( 784) 183 44.7 0.00074
NP_001305722 (OMIM: 246300,603028,607948) toll-lik ( 784) 183 44.7 0.00074
NP_003255 (OMIM: 246300,603028,607948) toll-like r ( 784) 183 44.7 0.00074
XP_016864064 (OMIM: 246300,603028,607948) PREDICTE ( 784) 183 44.7 0.00074
NP_001305718 (OMIM: 246300,603028,607948) toll-lik ( 784) 183 44.7 0.00074
NP_001305725 (OMIM: 246300,603028,607948) toll-lik ( 784) 183 44.7 0.00074
NP_001305716 (OMIM: 246300,603028,607948) toll-lik ( 784) 183 44.7 0.00074
XP_011530518 (OMIM: 246300,603028,607948) PREDICTE ( 784) 183 44.7 0.00074
XP_016864063 (OMIM: 246300,603028,607948) PREDICTE ( 784) 183 44.7 0.00074
NP_001305724 (OMIM: 246300,603028,607948) toll-lik ( 784) 183 44.7 0.00074
XP_016864065 (OMIM: 246300,603028,607948) PREDICTE ( 784) 183 44.7 0.00074
NP_001305720 (OMIM: 246300,603028,607948) toll-lik ( 784) 183 44.7 0.00074
XP_011530517 (OMIM: 246300,603028,607948) PREDICTE ( 784) 183 44.7 0.00074
XP_016861837 (OMIM: 602626) PREDICTED: interleukin ( 376) 165 41.0 0.0044
NP_001161400 (OMIM: 602626) interleukin-1 receptor ( 570) 165 41.1 0.0062
NP_002173 (OMIM: 602626) interleukin-1 receptor ac ( 570) 165 41.1 0.0062
NP_001161401 (OMIM: 602626) interleukin-1 receptor ( 570) 165 41.1 0.0062
>>NP_002459 (OMIM: 153600,602170,612260) myeloid differe (309 aa)
initn: 2073 init1: 2073 opt: 2073 Z-score: 2141.4 bits: 404.4 E(85289): 1.5e-112
Smith-Waterman score: 2073; 100.0% identity (100.0% similar) in 309 aa overlap (1-309:1-309)
10 20 30 40 50 60
pF1KB6 MRPDRAEAPGPPAMAAGGPGAGSAAPVSSTSSLPLAALNMRVRRRLSLFLNVRTQVAADW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 MRPDRAEAPGPPAMAAGGPGAGSAAPVSSTSSLPLAALNMRVRRRLSLFLNVRTQVAADW
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 TALAEEMDFEYLEIRQLETQADPTGRLLDAWQGRPGASVGRLLELLTKLGRDDVLLELGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 TALAEEMDFEYLEIRQLETQADPTGRLLDAWQGRPGASVGRLLELLTKLGRDDVLLELGP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 SIEEDCQKYILKQQQEEAEKPLQVAAVDSSVPRTAELAGITTLDDPLGHMPERFDAFICY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 SIEEDCQKYILKQQQEEAEKPLQVAAVDSSVPRTAELAGITTLDDPLGHMPERFDAFICY
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 CPSDIQFVQEMIRQLEQTNYRLKLCVSDRDVLPGTCVWSIASELIEKRCRRMVVVVSDDY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 CPSDIQFVQEMIRQLEQTNYRLKLCVSDRDVLPGTCVWSIASELIEKRCRRMVVVVSDDY
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 LQSKECDFQTKFALSLSPGAHQKRLIPIKYKAMKKEFPSILRFITVCDYTNPCTKSWFWT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 LQSKECDFQTKFALSLSPGAHQKRLIPIKYKAMKKEFPSILRFITVCDYTNPCTKSWFWT
250 260 270 280 290 300
pF1KB6 RLAKALSLP
:::::::::
NP_002 RLAKALSLP
>>NP_001166038 (OMIM: 153600,602170,612260) myeloid diff (317 aa)
initn: 2062 init1: 1517 opt: 2047 Z-score: 2114.5 bits: 399.4 E(85289): 4.9e-111
Smith-Waterman score: 2047; 97.5% identity (97.5% similar) in 317 aa overlap (1-309:1-317)
10 20 30 40 50 60
pF1KB6 MRPDRAEAPGPPAMAAGGPGAGSAAPVSSTSSLPLAALNMRVRRRLSLFLNVRTQVAADW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MRPDRAEAPGPPAMAAGGPGAGSAAPVSSTSSLPLAALNMRVRRRLSLFLNVRTQVAADW
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 TALAEEMDFEYLEIRQLETQADPTGRLLDAWQGRPGASVGRLLELLTKLGRDDVLLELGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TALAEEMDFEYLEIRQLETQADPTGRLLDAWQGRPGASVGRLLELLTKLGRDDVLLELGP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 SIEEDCQKYILKQQQEEAEKPLQVAAVDSSVPRTAELAGITTLDDPLGHMPERFDAFICY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SIEEDCQKYILKQQQEEAEKPLQVAAVDSSVPRTAELAGITTLDDPLGHMPERFDAFICY
130 140 150 160 170 180
190 200 210 220 230
pF1KB6 CPSDIQFVQEMIRQLEQTNYRLKLCVSDRDVLPGTCVWSIASELIEKR--------CRRM
:::::::::::::::::::::::::::::::::::::::::::::::: ::::
NP_001 CPSDIQFVQEMIRQLEQTNYRLKLCVSDRDVLPGTCVWSIASELIEKRLARRPRGGCRRM
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB6 VVVVSDDYLQSKECDFQTKFALSLSPGAHQKRLIPIKYKAMKKEFPSILRFITVCDYTNP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VVVVSDDYLQSKECDFQTKFALSLSPGAHQKRLIPIKYKAMKKEFPSILRFITVCDYTNP
250 260 270 280 290 300
300
pF1KB6 CTKSWFWTRLAKALSLP
:::::::::::::::::
NP_001 CTKSWFWTRLAKALSLP
310
>>XP_005265229 (OMIM: 153600,602170,612260) PREDICTED: m (258 aa)
initn: 1479 init1: 1479 opt: 1479 Z-score: 1531.1 bits: 291.2 E(85289): 1.5e-78
Smith-Waterman score: 1479; 100.0% identity (100.0% similar) in 222 aa overlap (1-222:1-222)
10 20 30 40 50 60
pF1KB6 MRPDRAEAPGPPAMAAGGPGAGSAAPVSSTSSLPLAALNMRVRRRLSLFLNVRTQVAADW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MRPDRAEAPGPPAMAAGGPGAGSAAPVSSTSSLPLAALNMRVRRRLSLFLNVRTQVAADW
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 TALAEEMDFEYLEIRQLETQADPTGRLLDAWQGRPGASVGRLLELLTKLGRDDVLLELGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TALAEEMDFEYLEIRQLETQADPTGRLLDAWQGRPGASVGRLLELLTKLGRDDVLLELGP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 SIEEDCQKYILKQQQEEAEKPLQVAAVDSSVPRTAELAGITTLDDPLGHMPERFDAFICY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SIEEDCQKYILKQQQEEAEKPLQVAAVDSSVPRTAELAGITTLDDPLGHMPERFDAFICY
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 CPSDIQFVQEMIRQLEQTNYRLKLCVSDRDVLPGTCVWSIASELIEKRCRRMVVVVSDDY
::::::::::::::::::::::::::::::::::::::::::
XP_005 CPSDIQFVQEMIRQLEQTNYRLKLCVSDRDVLPGTCVWSIASAAGWWWLSLMITCRARNV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 LQSKECDFQTKFALSLSPGAHQKRLIPIKYKAMKKEFPSILRFITVCDYTNPCTKSWFWT
XP_005 TSRPNLHSASLQVPIRSD
250
>>NP_001166040 (OMIM: 153600,602170,612260) myeloid diff (204 aa)
initn: 1091 init1: 1091 opt: 1091 Z-score: 1133.2 bits: 217.2 E(85289): 2.2e-56
Smith-Waterman score: 1091; 100.0% identity (100.0% similar) in 168 aa overlap (1-168:1-168)
10 20 30 40 50 60
pF1KB6 MRPDRAEAPGPPAMAAGGPGAGSAAPVSSTSSLPLAALNMRVRRRLSLFLNVRTQVAADW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MRPDRAEAPGPPAMAAGGPGAGSAAPVSSTSSLPLAALNMRVRRRLSLFLNVRTQVAADW
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 TALAEEMDFEYLEIRQLETQADPTGRLLDAWQGRPGASVGRLLELLTKLGRDDVLLELGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TALAEEMDFEYLEIRQLETQADPTGRLLDAWQGRPGASVGRLLELLTKLGRDDVLLELGP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 SIEEDCQKYILKQQQEEAEKPLQVAAVDSSVPRTAELAGITTLDDPLGHMPERFDAFICY
::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SIEEDCQKYILKQQQEEAEKPLQVAAVDSSVPRTAELAGITTLDDPLGAAGWWWLSLMIT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 CPSDIQFVQEMIRQLEQTNYRLKLCVSDRDVLPGTCVWSIASELIEKRCRRMVVVVSDDY
NP_001 CRARNVTSRPNLHSASLQVPIRSD
190 200
>>NP_001166039 (OMIM: 153600,602170,612260) myeloid diff (264 aa)
initn: 994 init1: 994 opt: 995 Z-score: 1032.8 bits: 199.0 E(85289): 8.7e-51
Smith-Waterman score: 1686; 85.4% identity (85.4% similar) in 309 aa overlap (1-309:1-264)
10 20 30 40 50 60
pF1KB6 MRPDRAEAPGPPAMAAGGPGAGSAAPVSSTSSLPLAALNMRVRRRLSLFLNVRTQVAADW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MRPDRAEAPGPPAMAAGGPGAGSAAPVSSTSSLPLAALNMRVRRRLSLFLNVRTQVAADW
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 TALAEEMDFEYLEIRQLETQADPTGRLLDAWQGRPGASVGRLLELLTKLGRDDVLLELGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TALAEEMDFEYLEIRQLETQADPTGRLLDAWQGRPGASVGRLLELLTKLGRDDVLLELGP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 SIEEDCQKYILKQQQEEAEKPLQVAAVDSSVPRTAELAGITTLDDPLGHMPERFDAFICY
:: :::::::::::::
NP_001 SI---------------------------------------------GHMPERFDAFICY
130
190 200 210 220 230 240
pF1KB6 CPSDIQFVQEMIRQLEQTNYRLKLCVSDRDVLPGTCVWSIASELIEKRCRRMVVVVSDDY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CPSDIQFVQEMIRQLEQTNYRLKLCVSDRDVLPGTCVWSIASELIEKRCRRMVVVVSDDY
140 150 160 170 180 190
250 260 270 280 290 300
pF1KB6 LQSKECDFQTKFALSLSPGAHQKRLIPIKYKAMKKEFPSILRFITVCDYTNPCTKSWFWT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LQSKECDFQTKFALSLSPGAHQKRLIPIKYKAMKKEFPSILRFITVCDYTNPCTKSWFWT
200 210 220 230 240 250
pF1KB6 RLAKALSLP
:::::::::
NP_001 RLAKALSLP
260
>>NP_001166037 (OMIM: 153600,602170,612260) myeloid diff (159 aa)
initn: 796 init1: 796 opt: 796 Z-score: 831.1 bits: 160.9 E(85289): 1.5e-39
Smith-Waterman score: 796; 100.0% identity (100.0% similar) in 122 aa overlap (1-122:1-122)
10 20 30 40 50 60
pF1KB6 MRPDRAEAPGPPAMAAGGPGAGSAAPVSSTSSLPLAALNMRVRRRLSLFLNVRTQVAADW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MRPDRAEAPGPPAMAAGGPGAGSAAPVSSTSSLPLAALNMRVRRRLSLFLNVRTQVAADW
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 TALAEEMDFEYLEIRQLETQADPTGRLLDAWQGRPGASVGRLLELLTKLGRDDVLLELGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TALAEEMDFEYLEIRQLETQADPTGRLLDAWQGRPGASVGRLLELLTKLGRDDVLLELGP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 SIEEDCQKYILKQQQEEAEKPLQVAAVDSSVPRTAELAGITTLDDPLGHMPERFDAFICY
::
NP_001 SIGAAGWWWLSLMITCRARNVTSRPNLHSASLQVPIRSD
130 140 150
>>XP_006713233 (OMIM: 153600,602170,612260) PREDICTED: m (213 aa)
initn: 796 init1: 796 opt: 796 Z-score: 829.3 bits: 161.0 E(85289): 1.9e-39
Smith-Waterman score: 1092; 79.7% identity (79.7% similar) in 222 aa overlap (1-222:1-177)
10 20 30 40 50 60
pF1KB6 MRPDRAEAPGPPAMAAGGPGAGSAAPVSSTSSLPLAALNMRVRRRLSLFLNVRTQVAADW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MRPDRAEAPGPPAMAAGGPGAGSAAPVSSTSSLPLAALNMRVRRRLSLFLNVRTQVAADW
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 TALAEEMDFEYLEIRQLETQADPTGRLLDAWQGRPGASVGRLLELLTKLGRDDVLLELGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 TALAEEMDFEYLEIRQLETQADPTGRLLDAWQGRPGASVGRLLELLTKLGRDDVLLELGP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 SIEEDCQKYILKQQQEEAEKPLQVAAVDSSVPRTAELAGITTLDDPLGHMPERFDAFICY
:: :::::::::::::
XP_006 SI---------------------------------------------GHMPERFDAFICY
130
190 200 210 220 230 240
pF1KB6 CPSDIQFVQEMIRQLEQTNYRLKLCVSDRDVLPGTCVWSIASELIEKRCRRMVVVVSDDY
::::::::::::::::::::::::::::::::::::::::::
XP_006 CPSDIQFVQEMIRQLEQTNYRLKLCVSDRDVLPGTCVWSIASAAGWWWLSLMITCRARNV
140 150 160 170 180 190
250 260 270 280 290 300
pF1KB6 LQSKECDFQTKFALSLSPGAHQKRLIPIKYKAMKKEFPSILRFITVCDYTNPCTKSWFWT
XP_006 TSRPNLHSASLQVPIRSD
200 210
>>XP_016872651 (OMIM: 606252,607948,610799,611162,614382 (221 aa)
initn: 135 init1: 71 opt: 191 Z-score: 206.3 bits: 45.8 E(85289): 9.4e-05
Smith-Waterman score: 196; 23.8% identity (55.2% similar) in 181 aa overlap (127-292:26-202)
100 110 120 130 140 150
pF1KB6 ASVGRLLELLTKLGRDDVLLELGPSIEEDCQKYILKQQQEEAEKPLQVAAVDSSVPRTAE
.. .::. ... ..: .... :.: : . .
XP_016 MASSTSLPAPGSRPKKPLGKMADWFRQTLLKKPKKRPNSPESTSS-DASQPTSQD
10 20 30 40 50
160 170 180 190 200
pF1KB6 ------LAGITTLDDPLGHMPER--------FDAFICYCPSDIQFVQEMIRQLEQTNYRL
:...:. . : : . .:. .:. :. .:... :: .. :
XP_016 SPLPPSLSSVTSPSLPPTHASDSGSSRWSKDYDVCVCHSEEDLVAAQDLVSYLEGSTASL
60 70 80 90 100 110
210 220 230 240 250 260
pF1KB6 KLCVSDRDVLPGTCVWS-IASELIEKRCRRMVVVVSDDYLQSKECDFQTKFALSLSPGAH
. .. ::. :: . : . . : ..:: :.... .::. : .: ::. .:::
XP_016 RCFLQLRDATPGGAIVSELCQALSSSHCR--VLLITPGFLQDPWCKYQMLQALTEAPGA-
120 130 140 150 160 170
270 280 290 300
pF1KB6 QKRLIPIKYKAMKKEFPSILRFITVCDYTNPCTKSWFWTRLAKALSLP
. ::. . .: :::. : .:
XP_016 EGCTIPLLSGLSRAAYPPELRFMYYVDGRGPDGGFRQVKEAVMRYLQTLS
180 190 200 210 220
>>NP_001305706 (OMIM: 606252,607948,610799,611162,614382 (221 aa)
initn: 135 init1: 71 opt: 191 Z-score: 206.3 bits: 45.8 E(85289): 9.4e-05
Smith-Waterman score: 196; 23.8% identity (55.2% similar) in 181 aa overlap (127-292:26-202)
100 110 120 130 140 150
pF1KB6 ASVGRLLELLTKLGRDDVLLELGPSIEEDCQKYILKQQQEEAEKPLQVAAVDSSVPRTAE
.. .::. ... ..: .... :.: : . .
NP_001 MASSTSLPAPGSRPKKPLGKMADWFRQTLLKKPKKRPNSPESTSS-DASQPTSQD
10 20 30 40 50
160 170 180 190 200
pF1KB6 ------LAGITTLDDPLGHMPER--------FDAFICYCPSDIQFVQEMIRQLEQTNYRL
:...:. . : : . .:. .:. :. .:... :: .. :
NP_001 SPLPPSLSSVTSPSLPPTHASDSGSSRWSKDYDVCVCHSEEDLVAAQDLVSYLEGSTASL
60 70 80 90 100 110
210 220 230 240 250 260
pF1KB6 KLCVSDRDVLPGTCVWS-IASELIEKRCRRMVVVVSDDYLQSKECDFQTKFALSLSPGAH
. .. ::. :: . : . . : ..:: :.... .::. : .: ::. .:::
NP_001 RCFLQLRDATPGGAIVSELCQALSSSHCR--VLLITPGFLQDPWCKYQMLQALTEAPGA-
120 130 140 150 160 170
270 280 290 300
pF1KB6 QKRLIPIKYKAMKKEFPSILRFITVCDYTNPCTKSWFWTRLAKALSLP
. ::. . .: :::. : .:
NP_001 EGCTIPLLSGLSRAAYPPELRFMYYVDGRGPDGGFRQVKEAVMRYLQTLS
180 190 200 210 220
>>NP_001034750 (OMIM: 606252,607948,610799,611162,614382 (221 aa)
initn: 135 init1: 71 opt: 191 Z-score: 206.3 bits: 45.8 E(85289): 9.4e-05
Smith-Waterman score: 196; 23.8% identity (55.2% similar) in 181 aa overlap (127-292:26-202)
100 110 120 130 140 150
pF1KB6 ASVGRLLELLTKLGRDDVLLELGPSIEEDCQKYILKQQQEEAEKPLQVAAVDSSVPRTAE
.. .::. ... ..: .... :.: : . .
NP_001 MASSTSLPAPGSRPKKPLGKMADWFRQTLLKKPKKRPNSPESTSS-DASQPTSQD
10 20 30 40 50
160 170 180 190 200
pF1KB6 ------LAGITTLDDPLGHMPER--------FDAFICYCPSDIQFVQEMIRQLEQTNYRL
:...:. . : : . .:. .:. :. .:... :: .. :
NP_001 SPLPPSLSSVTSPSLPPTHASDSGSSRWSKDYDVCVCHSEEDLVAAQDLVSYLEGSTASL
60 70 80 90 100 110
210 220 230 240 250 260
pF1KB6 KLCVSDRDVLPGTCVWS-IASELIEKRCRRMVVVVSDDYLQSKECDFQTKFALSLSPGAH
. .. ::. :: . : . . : ..:: :.... .::. : .: ::. .:::
NP_001 RCFLQLRDATPGGAIVSELCQALSSSHCR--VLLITPGFLQDPWCKYQMLQALTEAPGA-
120 130 140 150 160 170
270 280 290 300
pF1KB6 QKRLIPIKYKAMKKEFPSILRFITVCDYTNPCTKSWFWTRLAKALSLP
. ::. . .: :::. : .:
NP_001 EGCTIPLLSGLSRAAYPPELRFMYYVDGRGPDGGFRQVKEAVMRYLQTLS
180 190 200 210 220
309 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 01:13:30 2016 done: Sat Nov 5 01:13:31 2016
Total Scan time: 8.320 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]