FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB6410, 335 aa
  1>>>pF1KB6410 335 - 335 aa - 335 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 4.8096+/-0.000822; mu= 18.3185+/- 0.049
 mean_var=55.9017+/-11.225, 0's: 0 Z-trim(105.3): 12  B-trim: 2 in 1/48
 Lambda= 0.171539
 statistics sampled from 8352 (8356) to 8352 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.637), E-opt: 0.2 (0.257), width:  16
 Scan time:  2.520

The best scores are:                                      opt bits E(32554)
CCDS9549.1 OSGEP gene_id:55644|Hs108|chr14         ( 335) 2238 562.0 2.5e-160
CCDS46472.1 OSGEPL1 gene_id:64172|Hs108|chr2       ( 414)  279 77.2 2.6e-14


>>CCDS9549.1 OSGEP gene_id:55644|Hs108|chr14              (335 aa)
 initn: 2238 init1: 2238 opt: 2238  Z-score: 2992.0  bits: 562.0 E(32554): 2.5e-160
Smith-Waterman score: 2238; 100.0% identity (100.0% similar) in 335 aa overlap (1-335:1-335)

               10        20        30        40        50        60
pF1KB6 MPAVLGFEGSANKIGVGVVRDGKVLANPRRTYVTPPGTGFLPGDTARHHRAVILDLLQEA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS95 MPAVLGFEGSANKIGVGVVRDGKVLANPRRTYVTPPGTGFLPGDTARHHRAVILDLLQEA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 LTESGLTSQDIDCIAYTKGPGMGAPLVSVAVVARTVAQLWNKPLVGVNHCIGHIEMGRLI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS95 LTESGLTSQDIDCIAYTKGPGMGAPLVSVAVVARTVAQLWNKPLVGVNHCIGHIEMGRLI
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 TGATSPTVLYVSGGNTQVIAYSEHRYRIFGETIDIAVGNCLDRFARVLKISNDPSPGYNI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS95 TGATSPTVLYVSGGNTQVIAYSEHRYRIFGETIDIAVGNCLDRFARVLKISNDPSPGYNI
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB6 EQMAKRGKKLVELPYTVKGMDVSFSGILSFIEDVAHRMLATGECTPEDLCFSLQETVFAM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS95 EQMAKRGKKLVELPYTVKGMDVSFSGILSFIEDVAHRMLATGECTPEDLCFSLQETVFAM
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB6 LVEITERAMAHCGSQEALIVGGVGCNVRLQEMMATMCQERGARLFATDERFCIDNGAMIA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS95 LVEITERAMAHCGSQEALIVGGVGCNVRLQEMMATMCQERGARLFATDERFCIDNGAMIA
              250       260       270       280       290       300

              310       320       330     
pF1KB6 QAGWEMFRAGHRTPLSDSGVTQRYRTDEVEVTWRD
       :::::::::::::::::::::::::::::::::::
CCDS95 QAGWEMFRAGHRTPLSDSGVTQRYRTDEVEVTWRD
              310       320       330     

>>CCDS46472.1 OSGEPL1 gene_id:64172|Hs108|chr2            (414 aa)
 initn: 304 init1: 114 opt: 279  Z-score: 370.5  bits: 77.2 E(32554): 2.6e-14
Smith-Waterman score: 416; 30.0% identity (57.9% similar) in 337 aa overlap (4-310:39-374)

                                          10        20           30
pF1KB6                            MPAVLGFEGSANKIGVGVVRD-GKVL--ANPRR
                                     :::.: : .  ...:: . :.::  :   .
CCDS46 GVFFKPSKRKVYEFLRSFNFHPGTLFLHKIVLGIETSCDDTAAAVVDETGNVLGEAIHSQ
       10        20        30        40        50        60        

               40        50        60        70        80          
pF1KB6 TYVTPPGTGFLPGDTARHHRAVILDLLQEALTESGLTSQDIDCIAYTKGPGMGAPL-VSV
       : :     :..:  . . ::  :  ..::::. ::.. .:.. :: :  ::..  : :..
CCDS46 TEVHLKTGGIVPPAAQQLHRENIQRIVQEALSASGVSPSDLSAIATTIKPGLALSLGVGL
       70        80        90       100       110       120        

      90       100       110       120        130        140       
pF1KB6 AVVARTVAQLWNKPLVGVNHCIGHIEMGRLITGATSP-TVLYVSGGNTQV-IAYSEHRYR
       .   . :.:: .::.. ..:  .:    :: . .  :  :: .:::.  . .. .   . 
CCDS46 SFSLQLVGQL-KKPFIPIHHMEAHALTIRLTNKVEFPFLVLLISGGHCLLALVQGVSDFL
      130        140       150       160       170       180       

       150       160       170            180       190            
pF1KB6 IFGETIDIAVGNCLDRFARVLKISNDP-----SPGYNIEQMAKRGKKL---VELP-YTVK
       ..:...::: :. ::. :: :.. . :     : :  ::..::.:...   .. : . .:
CCDS46 LLGKSLDIAPGDMLDKVARRLSLIKHPECSTMSGGKAIEHLAKQGNRFHFDIKPPLHHAK
       190       200       210       220       230       240       

      200       210            220         230       240       250 
pF1KB6 GMDVSFSGILSFIEDVAHRM-----LATGE--CTPEDLCFSLQETVFAMLVEITERAMAH
       . : ::.:.    . .  .      .  :.   .  :.  ..:.:.   ::. :.::.  
CCDS46 NCDFSFTGLQHVTDKIIMKKEKEEGIEKGQILSSAADIAATVQHTMACHLVKRTHRAILF
       250       260       270       280       290       300       

                   260         270       280       290       300   
pF1KB6 CGSQE------ALIV--GGVGCNVRLQEMMATMCQERGARLFATDERFCIDNGAMIAQAG
       : ...      :..:  :::. :  ... .  . .     :.    :.: ::: :::  :
CCDS46 CKQRDLLPQNNAVLVASGGVASNFYIRRALEILTNATQCTLLCPPPRLCTDNGIMIAWNG
       310       320       330       340       350       360       

           310       320       330                    
pF1KB6 WEMFRAGHRTPLSDSGVTQRYRTDEVEVTWRD               
        : .:::                                        
CCDS46 IERLRAGLGILHDIEGIRYEPKCPLGVDISKEVGEASIKVPQLKMEI
       370       380       390       400       410    




335 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 22:53:55 2016 done: Fri Nov  4 22:53:56 2016
 Total Scan time:  2.520 Total Display time: -0.010

Function used was FASTA [36.3.4 Apr, 2011]