Result of FASTA (omim) for
pF1KB6394
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB6394, 303 aa
1>>>pF1KB6394 303 - 303 aa - 303 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.8442+/-0.000383; mu= 18.0428+/- 0.024
mean_var=62.2846+/-12.630, 0's: 0 Z-trim(112.4): 149 B-trim: 301 in 1/50
Lambda= 0.162511
statistics sampled from 21192 (21358) to 21192 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.624), E-opt: 0.2 (0.25), width: 16
Scan time: 7.160
The best scores are: opt bits E(85289)
NP_060911 (OMIM: 605843) peroxisomal trans-2-enoyl ( 303) 1994 476.1 3.7e-134
XP_011509780 (OMIM: 605843) PREDICTED: peroxisomal ( 157) 1049 254.3 1.1e-67
XP_016868636 (OMIM: 222745) PREDICTED: 2,4-dienoyl ( 326) 536 134.3 3.2e-31
NP_001317504 (OMIM: 222745) 2,4-dienoyl-CoA reduct ( 326) 536 134.3 3.2e-31
XP_016868637 (OMIM: 222745) PREDICTED: 2,4-dienoyl ( 326) 536 134.3 3.2e-31
XP_011515182 (OMIM: 222745) PREDICTED: 2,4-dienoyl ( 326) 536 134.3 3.2e-31
NP_001350 (OMIM: 222745) 2,4-dienoyl-CoA reductase ( 335) 536 134.3 3.2e-31
NP_065715 (OMIM: 615839) peroxisomal 2,4-dienoyl-C ( 292) 523 131.2 2.4e-30
XP_005250865 (OMIM: 222745) PREDICTED: 2,4-dienoyl ( 243) 394 100.9 2.6e-21
NP_066284 (OMIM: 611596) dehydrogenase/reductase S ( 278) 394 100.9 2.9e-21
NP_057330 (OMIM: 612832) 17-beta-hydroxysteroid de ( 270) 389 99.8 6.5e-21
XP_005267306 (OMIM: 615194) PREDICTED: dehydrogena ( 280) 378 97.2 4e-20
NP_005785 (OMIM: 615194) dehydrogenase/reductase S ( 280) 378 97.2 4e-20
XP_006720064 (OMIM: 615194) PREDICTED: dehydrogena ( 280) 378 97.2 4e-20
NP_878912 (OMIM: 615194) dehydrogenase/reductase S ( 300) 317 82.9 8.5e-16
XP_005259026 (OMIM: 612832) PREDICTED: 17-beta-hyd ( 212) 306 80.2 3.9e-15
NP_055049 (OMIM: 601417) estradiol 17-beta-dehydro ( 261) 303 79.6 7.4e-15
NP_000851 (OMIM: 119900,259100,601688) 15-hydroxyp ( 266) 288 76.1 8.6e-14
NP_077284 (OMIM: 616159) dehydrogenase/reductase S ( 260) 276 73.3 5.9e-13
XP_011534641 (OMIM: 615194) PREDICTED: dehydrogena ( 204) 268 71.3 1.8e-12
XP_011534640 (OMIM: 615194) PREDICTED: dehydrogena ( 204) 268 71.3 1.8e-12
NP_001207422 (OMIM: 616161) dehydrogenase/reductas ( 312) 265 70.7 4.1e-12
NP_001099041 (OMIM: 616161) dehydrogenase/reductas ( 311) 261 69.8 7.8e-12
NP_932349 (OMIM: 615196) dehydrogenase/reductase S ( 232) 248 66.7 5.1e-11
NP_000405 (OMIM: 233400,261515,601860) peroxisomal ( 736) 247 66.8 1.5e-10
NP_001139288 (OMIM: 119900,259100,601688) 15-hydro ( 178) 237 64.0 2.5e-10
NP_057113 (OMIM: 612833) dehydrogenase/reductase S ( 339) 240 64.9 2.5e-10
XP_016876857 (OMIM: 612833) PREDICTED: dehydrogena ( 404) 240 65.0 2.9e-10
XP_011522088 (OMIM: 616160) PREDICTED: dehydrogena ( 334) 231 62.8 1.1e-09
NP_001309209 (OMIM: 612833) dehydrogenase/reductas ( 289) 230 62.5 1.1e-09
NP_612461 (OMIM: 610410) dehydrogenase/reductase S ( 313) 229 62.3 1.4e-09
NP_001129522 (OMIM: 610410) dehydrogenase/reductas ( 313) 229 62.3 1.4e-09
XP_005257715 (OMIM: 616159) PREDICTED: dehydrogena ( 229) 227 61.7 1.5e-09
XP_006720309 (OMIM: 615195) PREDICTED: putative de ( 244) 227 61.8 1.6e-09
XP_005266734 (OMIM: 136440) PREDICTED: 3-ketodihyd ( 298) 226 61.6 2.2e-09
NP_002026 (OMIM: 136440) 3-ketodihydrosphingosine ( 332) 226 61.6 2.4e-09
NP_001317088 (OMIM: 616160) dehydrogenase/reductas ( 310) 225 61.4 2.7e-09
NP_056325 (OMIM: 616160) dehydrogenase/reductase S ( 325) 225 61.4 2.8e-09
XP_016879915 (OMIM: 616160) PREDICTED: dehydrogena ( 325) 225 61.4 2.8e-09
XP_005256652 (OMIM: 616160) PREDICTED: dehydrogena ( 372) 225 61.4 3.1e-09
XP_016879914 (OMIM: 616160) PREDICTED: dehydrogena ( 372) 225 61.4 3.1e-09
XP_006720068 (OMIM: 611596) PREDICTED: dehydrogena ( 233) 219 59.9 5.7e-09
NP_001243234 (OMIM: 119900,259100,601688) 15-hydro ( 143) 215 58.8 7.5e-09
XP_011530209 (OMIM: 119900,259100,601688) PREDICTE ( 176) 215 58.8 8.8e-09
NP_004484 (OMIM: 300220,300256,300438) 3-hydroxyac ( 261) 215 59.0 1.2e-08
XP_016870160 (OMIM: 264300,605573) PREDICTED: test ( 310) 208 57.4 4.3e-08
NP_000188 (OMIM: 264300,605573) testosterone 17-be ( 310) 208 57.4 4.3e-08
XP_011516920 (OMIM: 264300,605573) PREDICTED: test ( 310) 208 57.4 4.3e-08
XP_016870161 (OMIM: 264300,605573) PREDICTED: test ( 310) 208 57.4 4.3e-08
XP_011516921 (OMIM: 264300,605573) PREDICTED: test ( 310) 208 57.4 4.3e-08
>>NP_060911 (OMIM: 605843) peroxisomal trans-2-enoyl-CoA (303 aa)
initn: 1994 init1: 1994 opt: 1994 Z-score: 2529.5 bits: 476.1 E(85289): 3.7e-134
Smith-Waterman score: 1994; 100.0% identity (100.0% similar) in 303 aa overlap (1-303:1-303)
10 20 30 40 50 60
pF1KB6 MASWAKGRSYLAPGLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAAD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 MASWAKGRSYLAPGLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAAD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 ELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 ELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHIS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 SKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAGFPLAVHSGAARAGVYN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 SKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAGFPLAVHSGAARAGVYN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 LTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEEVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 LTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEEVS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 SVVCFLLSPAASFITGQSVDVDGGRSLYTHSYEVPDHDNWPKGAGDLSVVKKMKETFKEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 SVVCFLLSPAASFITGQSVDVDGGRSLYTHSYEVPDHDNWPKGAGDLSVVKKMKETFKEK
250 260 270 280 290 300
pF1KB6 AKL
:::
NP_060 AKL
>>XP_011509780 (OMIM: 605843) PREDICTED: peroxisomal tra (157 aa)
initn: 1049 init1: 1049 opt: 1049 Z-score: 1336.1 bits: 254.3 E(85289): 1.1e-67
Smith-Waterman score: 1049; 100.0% identity (100.0% similar) in 157 aa overlap (147-303:1-157)
120 130 140 150 160 170
pF1KB6 EHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAGFPLAVHSGAARA
::::::::::::::::::::::::::::::
XP_011 MKEHGGSIVNIIVPTKAGFPLAVHSGAARA
10 20 30
180 190 200 210 220 230
pF1KB6 GVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVP
40 50 60 70 80 90
240 250 260 270 280 290
pF1KB6 EEVSSVVCFLLSPAASFITGQSVDVDGGRSLYTHSYEVPDHDNWPKGAGDLSVVKKMKET
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EEVSSVVCFLLSPAASFITGQSVDVDGGRSLYTHSYEVPDHDNWPKGAGDLSVVKKMKET
100 110 120 130 140 150
300
pF1KB6 FKEKAKL
:::::::
XP_011 FKEKAKL
>>XP_016868636 (OMIM: 222745) PREDICTED: 2,4-dienoyl-CoA (326 aa)
initn: 499 init1: 168 opt: 536 Z-score: 681.6 bits: 134.3 E(85289): 3.2e-31
Smith-Waterman score: 536; 35.2% identity (69.3% similar) in 261 aa overlap (8-264:40-293)
10 20 30
pF1KB6 MASWAKGRSYLAPGLLQGQVAIVTGGATGIGKAIVKE
...: :. .::.::..:::.::.::...
XP_016 LLMGEFFSYGTKILYQNTEALQSKFFSPLQKAMLPPNSFQGKVAFITGGGTGLGKGMTTL
10 20 30 40 50 60
40 50 60 70 80 90
pF1KB6 LLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLDT
: ::.. ::::::.. ::..:...... .: :::..:. . :.: :. . .
XP_016 LSSLGAQCVIASRKMDVLKATAEQISSQTG----NKVHAIQCDVRDPDMVQNTVSELIKV
70 80 90 100 110 120
100 110 120 130 140 150
pF1KB6 FGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGG----S
:. :...::..:.:.::.:..: ..:... . :.:: .. . .. .: . : :
XP_016 AGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLS
130 140 150 160 170 180
160 170 180 190 200 210
pF1KB6 IVNIIVPTKAGFPLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENY
:..: . : .:: .: :..:.::: ..:::: ::. :.:.: . :: : .. :
XP_016 ITTIYAETGSGF--VVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRL
190 200 210 220 230 240
220 230 240 250 260 270
pF1KB6 GSWGQSFFEGSFQKIPAKRIGVPEEVSSVVCFLLSPAASFITGQSVDVDGGRSLYTHSYE
: .: . . .:: :.:. ::..... :: : ::.:.: . :::
XP_016 DPTG-TFEKEMIGRIPCGRLGTVEELANLAAFLCSDYASWINGAVIKFDGGEEVLISGEF
250 260 270 280 290 300
280 290 300
pF1KB6 VPDHDNWPKGAGDLSVVKKMKETFKEKAKL
XP_016 NDLRKVTKEQWDTIEELIRKTKGS
310 320
>>NP_001317504 (OMIM: 222745) 2,4-dienoyl-CoA reductase, (326 aa)
initn: 499 init1: 168 opt: 536 Z-score: 681.6 bits: 134.3 E(85289): 3.2e-31
Smith-Waterman score: 536; 35.2% identity (69.3% similar) in 261 aa overlap (8-264:40-293)
10 20 30
pF1KB6 MASWAKGRSYLAPGLLQGQVAIVTGGATGIGKAIVKE
...: :. .::.::..:::.::.::...
NP_001 LLMGEFFSYGTKILYQNTEALQSKFFSPLQKAMLPPNSFQGKVAFITGGGTGLGKGMTTL
10 20 30 40 50 60
40 50 60 70 80 90
pF1KB6 LLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLDT
: ::.. ::::::.. ::..:...... .: :::..:. . :.: :. . .
NP_001 LSSLGAQCVIASRKMDVLKATAEQISSQTG----NKVHAIQCDVRDPDMVQNTVSELIKV
70 80 90 100 110 120
100 110 120 130 140 150
pF1KB6 FGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGG----S
:. :...::..:.:.::.:..: ..:... . :.:: .. . .. .: . : :
NP_001 AGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLS
130 140 150 160 170 180
160 170 180 190 200 210
pF1KB6 IVNIIVPTKAGFPLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENY
:..: . : .:: .: :..:.::: ..:::: ::. :.:.: . :: : .. :
NP_001 ITTIYAETGSGF--VVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRL
190 200 210 220 230 240
220 230 240 250 260 270
pF1KB6 GSWGQSFFEGSFQKIPAKRIGVPEEVSSVVCFLLSPAASFITGQSVDVDGGRSLYTHSYE
: .: . . .:: :.:. ::..... :: : ::.:.: . :::
NP_001 DPTG-TFEKEMIGRIPCGRLGTVEELANLAAFLCSDYASWINGAVIKFDGGEEVLISGEF
250 260 270 280 290 300
280 290 300
pF1KB6 VPDHDNWPKGAGDLSVVKKMKETFKEKAKL
NP_001 NDLRKVTKEQWDTIEELIRKTKGS
310 320
>>XP_016868637 (OMIM: 222745) PREDICTED: 2,4-dienoyl-CoA (326 aa)
initn: 499 init1: 168 opt: 536 Z-score: 681.6 bits: 134.3 E(85289): 3.2e-31
Smith-Waterman score: 536; 35.2% identity (69.3% similar) in 261 aa overlap (8-264:40-293)
10 20 30
pF1KB6 MASWAKGRSYLAPGLLQGQVAIVTGGATGIGKAIVKE
...: :. .::.::..:::.::.::...
XP_016 LLMGEFFSYGTKILYQNTEALQSKFFSPLQKAMLPPNSFQGKVAFITGGGTGLGKGMTTL
10 20 30 40 50 60
40 50 60 70 80 90
pF1KB6 LLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLDT
: ::.. ::::::.. ::..:...... .: :::..:. . :.: :. . .
XP_016 LSSLGAQCVIASRKMDVLKATAEQISSQTG----NKVHAIQCDVRDPDMVQNTVSELIKV
70 80 90 100 110 120
100 110 120 130 140 150
pF1KB6 FGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGG----S
:. :...::..:.:.::.:..: ..:... . :.:: .. . .. .: . : :
XP_016 AGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLS
130 140 150 160 170 180
160 170 180 190 200 210
pF1KB6 IVNIIVPTKAGFPLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENY
:..: . : .:: .: :..:.::: ..:::: ::. :.:.: . :: : .. :
XP_016 ITTIYAETGSGF--VVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRL
190 200 210 220 230 240
220 230 240 250 260 270
pF1KB6 GSWGQSFFEGSFQKIPAKRIGVPEEVSSVVCFLLSPAASFITGQSVDVDGGRSLYTHSYE
: .: . . .:: :.:. ::..... :: : ::.:.: . :::
XP_016 DPTG-TFEKEMIGRIPCGRLGTVEELANLAAFLCSDYASWINGAVIKFDGGEEVLISGEF
250 260 270 280 290 300
280 290 300
pF1KB6 VPDHDNWPKGAGDLSVVKKMKETFKEKAKL
XP_016 NDLRKVTKEQWDTIEELIRKTKGS
310 320
>>XP_011515182 (OMIM: 222745) PREDICTED: 2,4-dienoyl-CoA (326 aa)
initn: 499 init1: 168 opt: 536 Z-score: 681.6 bits: 134.3 E(85289): 3.2e-31
Smith-Waterman score: 536; 35.2% identity (69.3% similar) in 261 aa overlap (8-264:40-293)
10 20 30
pF1KB6 MASWAKGRSYLAPGLLQGQVAIVTGGATGIGKAIVKE
...: :. .::.::..:::.::.::...
XP_011 LWKEMFFSYGTKILYQNTEALQSKFFSPLQKAMLPPNSFQGKVAFITGGGTGLGKGMTTL
10 20 30 40 50 60
40 50 60 70 80 90
pF1KB6 LLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLDT
: ::.. ::::::.. ::..:...... .: :::..:. . :.: :. . .
XP_011 LSSLGAQCVIASRKMDVLKATAEQISSQTG----NKVHAIQCDVRDPDMVQNTVSELIKV
70 80 90 100 110 120
100 110 120 130 140 150
pF1KB6 FGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGG----S
:. :...::..:.:.::.:..: ..:... . :.:: .. . .. .: . : :
XP_011 AGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLS
130 140 150 160 170 180
160 170 180 190 200 210
pF1KB6 IVNIIVPTKAGFPLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENY
:..: . : .:: .: :..:.::: ..:::: ::. :.:.: . :: : .. :
XP_011 ITTIYAETGSGF--VVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRL
190 200 210 220 230 240
220 230 240 250 260 270
pF1KB6 GSWGQSFFEGSFQKIPAKRIGVPEEVSSVVCFLLSPAASFITGQSVDVDGGRSLYTHSYE
: .: . . .:: :.:. ::..... :: : ::.:.: . :::
XP_011 DPTG-TFEKEMIGRIPCGRLGTVEELANLAAFLCSDYASWINGAVIKFDGGEEVLISGEF
250 260 270 280 290 300
280 290 300
pF1KB6 VPDHDNWPKGAGDLSVVKKMKETFKEKAKL
XP_011 NDLRKVTKEQWDTIEELIRKTKGS
310 320
>>NP_001350 (OMIM: 222745) 2,4-dienoyl-CoA reductase, mi (335 aa)
initn: 499 init1: 168 opt: 536 Z-score: 681.4 bits: 134.3 E(85289): 3.2e-31
Smith-Waterman score: 536; 35.2% identity (69.3% similar) in 261 aa overlap (8-264:49-302)
10 20 30
pF1KB6 MASWAKGRSYLAPGLLQGQVAIVTGGATGIGKAIVKE
...: :. .::.::..:::.::.::...
NP_001 LAPRRFFSYGTKILYQNTEALQSKFFSPLQKAMLPPNSFQGKVAFITGGGTGLGKGMTTL
20 30 40 50 60 70
40 50 60 70 80 90
pF1KB6 LLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLDT
: ::.. ::::::.. ::..:...... .: :::..:. . :.: :. . .
NP_001 LSSLGAQCVIASRKMDVLKATAEQISSQTG----NKVHAIQCDVRDPDMVQNTVSELIKV
80 90 100 110 120 130
100 110 120 130 140 150
pF1KB6 FGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGG----S
:. :...::..:.:.::.:..: ..:... . :.:: .. . .. .: . : :
NP_001 AGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLS
140 150 160 170 180 190
160 170 180 190 200 210
pF1KB6 IVNIIVPTKAGFPLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENY
:..: . : .:: .: :..:.::: ..:::: ::. :.:.: . :: : .. :
NP_001 ITTIYAETGSGF--VVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRL
200 210 220 230 240 250
220 230 240 250 260 270
pF1KB6 GSWGQSFFEGSFQKIPAKRIGVPEEVSSVVCFLLSPAASFITGQSVDVDGGRSLYTHSYE
: .: . . .:: :.:. ::..... :: : ::.:.: . :::
NP_001 DPTG-TFEKEMIGRIPCGRLGTVEELANLAAFLCSDYASWINGAVIKFDGGEEVLISGEF
260 270 280 290 300 310
280 290 300
pF1KB6 VPDHDNWPKGAGDLSVVKKMKETFKEKAKL
NP_001 NDLRKVTKEQWDTIEELIRKTKGS
320 330
>>NP_065715 (OMIM: 615839) peroxisomal 2,4-dienoyl-CoA r (292 aa)
initn: 306 init1: 179 opt: 523 Z-score: 665.8 bits: 131.2 E(85289): 2.4e-30
Smith-Waterman score: 523; 34.9% identity (67.4% similar) in 258 aa overlap (8-264:18-270)
10 20 30 40 50
pF1KB6 MASWAKGRSYLAPGLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASR
: . : ::. .::..:::..::: :.. ... : ..:::::
NP_065 MAQPPPDVEGDDCLPAYRHLFCPDLLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASR
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB6 KLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGG
.: :. .:: .: . . : .:.. ..: : : ..: ::.:..:.: ..:
NP_065 SLPRVLTAARKLAG----ATGRRCLPLSMDVRAPPAVMAAVDQALKEFGRIDILINCAAG
70 80 90 100 110
120 130 140 150 160
pF1KB6 QFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPT-KAGFPLAV
.:: :: .: .....:.. . .::: . ...: .....::: :::: . . : : :
NP_065 NFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRGQALQV
120 130 140 150 160 170
170 180 190 200 210 220
pF1KB6 HSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIP
:.:.:.:.: .:. ::.::. ..::.: .::: : . ... :. :. . . :
NP_065 HAGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLRRLGG-PQASLSTKVTASP
180 190 200 210 220 230
230 240 250 260 270 280
pF1KB6 AKRIGVPEEVSSVVCFLLSPAASFITGQSVDVDGGRSLYTHSYEVPDHDNWPKGAGDLSV
.:.: :.. : .: :: ::..:: . .:::
NP_065 LQRLGNKTEIAHSVLYLASPLASYVTGAVLVADGGAWLTFPNGVKGLPDFASFSAKL
240 250 260 270 280 290
290 300
pF1KB6 VKKMKETFKEKAKL
>>XP_005250865 (OMIM: 222745) PREDICTED: 2,4-dienoyl-CoA (243 aa)
initn: 367 init1: 163 opt: 394 Z-score: 503.5 bits: 100.9 E(85289): 2.6e-21
Smith-Waterman score: 394; 32.3% identity (66.4% similar) in 217 aa overlap (52-264:1-210)
30 40 50 60 70 80
pF1KB6 IVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNI
.. ::..:...... .: :::..
XP_005 MDVLKATAEQISSQT----GNKVHAIQCDV
10 20
90 100 110 120 130 140
pF1KB6 RNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKA
:. . :.: :. . . :. :...::..:.:.::.:..: ..:... . :.:: ..
XP_005 RDPDMVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLE
30 40 50 60 70 80
150 160 170 180 190
pF1KB6 VYSSWMKEHGG----SIVNIIVPTKAGFPLAVHSGAARAGVYNLTKSLALEWACSGIRIN
. .. .: . : ::..: . : .:: .: :..:.::: ..:::: ::. :.:.:
XP_005 IGKQLIKAQKGAAFLSITTIYAETGSGF--VVPSASAKAGVEAMSKSLAAEWGKYGMRFN
90 100 110 120 130 140
200 210 220 230 240 250
pF1KB6 CVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEEVSSVVCFLLSPAASFITGQ
. :: : .. : : .: . . .:: :.:. ::..... :: : ::.:.:
XP_005 VIQPGPIKTKGAFSRLDPTG-TFEKEMIGRIPCGRLGTVEELANLAAFLCSDYASWINGA
150 160 170 180 190 200
260 270 280 290 300
pF1KB6 SVDVDGGRSLYTHSYEVPDHDNWPKGAGDLSVVKKMKETFKEKAKL
. :::
XP_005 VIKFDGGEEVLISGEFNDLRKVTKEQWDTIEELIRKTKGS
210 220 230 240
>>NP_066284 (OMIM: 611596) dehydrogenase/reductase SDR f (278 aa)
initn: 330 init1: 114 opt: 394 Z-score: 502.6 bits: 100.9 E(85289): 2.9e-21
Smith-Waterman score: 394; 33.1% identity (63.2% similar) in 269 aa overlap (1-264:19-273)
10 20 30 40
pF1KB6 MASWAKGRSYLAPGLLQGQVAIVTGGATGIGKAIVKELLELG
::: .: . : : ..::.::... ::: ::...: . :
NP_066 MHKAGLLGLCARAWNSVRMAS--SGMTRRDP--LANKVALVTASTDGIGFAIARRLAQDG
10 20 30 40 50
50 60 70 80 90 100
pF1KB6 SNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLDTFGKIN
..::..::: . . .:. ::. . : :.. . :. . :: ... : :.
NP_066 AHVVVSSRKQQNVDQAVATLQG-----EGLSVTGTVCHVGKAEDRERLVATAVKLHGGID
60 70 80 90 100 110
110 120 130 140 150 160
pF1KB6 FLVNNGG-GQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPT
.::.:.. . :.. .. . : .:. :. . : ::: :. :::.: :: .
NP_066 ILVSNAAVNPFFGSIMDVTEEVWDKTLDINVKAPALMTKAVVPEMEKRGGGSVV--IVSS
120 130 140 150 160
170 180 190 200 210
pF1KB6 KAGF---PLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQ
:.: : ....... .:::.::.: : .::.::.:::.: .:. . : .
NP_066 IAAFSPSPGFSPYNVSKTALLGLTKTLAIELAPRNIRVNCLAPGLI--KTSFSRM-LWMD
170 180 190 200 210 220
220 230 240 250 260 270
pF1KB6 SFFEGSFQK-IPAKRIGVPEEVSSVVCFLLSPAASFITGQSVDVDGGRSLYTHSYEVPDH
. : :... . .:.: ::. ...: :: : ::.:::..: : ::
NP_066 KEKEESMKETLRIRRLGEPEDCAGIVSFLCSEDASYITGETVVVGGGTPSRL
230 240 250 260 270
280 290 300
pF1KB6 DNWPKGAGDLSVVKKMKETFKEKAKL
303 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 22:52:04 2016 done: Fri Nov 4 22:52:05 2016
Total Scan time: 7.160 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]