Result of FASTA (omim) for
pF1KB6334
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB6334, 289 aa
1>>>pF1KB6334 289 - 289 aa - 289 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 8.4750+/-0.000513; mu= 0.0844+/- 0.032
mean_var=149.3481+/-29.941, 0's: 0 Z-trim(112.3): 102 B-trim: 285 in 1/53
Lambda= 0.104948
statistics sampled from 21046 (21136) to 21046 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.599), E-opt: 0.2 (0.248), width: 16
Scan time: 7.090
The best scores are: opt bits E(85289)
XP_005274252 (OMIM: 600876) PREDICTED: syntaxin-3 ( 289) 1782 281.7 1.1e-75
NP_004168 (OMIM: 600876) syntaxin-3 isoform 1 [Hom ( 289) 1782 281.7 1.1e-75
XP_016873677 (OMIM: 600876) PREDICTED: syntaxin-3 ( 281) 1720 272.3 7.3e-73
XP_016873680 (OMIM: 600876) PREDICTED: syntaxin-3 ( 281) 1720 272.3 7.3e-73
XP_016873679 (OMIM: 600876) PREDICTED: syntaxin-3 ( 281) 1720 272.3 7.3e-73
XP_016873678 (OMIM: 600876) PREDICTED: syntaxin-3 ( 281) 1720 272.3 7.3e-73
XP_005274255 (OMIM: 600876) PREDICTED: syntaxin-3 ( 287) 1684 266.9 3.2e-71
NP_001171511 (OMIM: 600876) syntaxin-3 isoform 2 [ ( 277) 1654 262.3 7.3e-70
XP_016873681 (OMIM: 600876) PREDICTED: syntaxin-3 ( 279) 1622 257.5 2.1e-68
XP_016873682 (OMIM: 600876) PREDICTED: syntaxin-3 ( 279) 1622 257.5 2.1e-68
XP_016873683 (OMIM: 600876) PREDICTED: syntaxin-3 ( 269) 1592 252.9 4.8e-67
XP_005274257 (OMIM: 600876) PREDICTED: syntaxin-3 ( 252) 1400 223.9 2.5e-58
XP_016873684 (OMIM: 600876) PREDICTED: syntaxin-3 ( 244) 1338 214.5 1.7e-55
XP_011543523 (OMIM: 600876) PREDICTED: syntaxin-3 ( 192) 1181 190.7 1.9e-48
NP_919337 (OMIM: 132350) syntaxin-2 isoform 2 [Hom ( 288) 1164 188.1 1.6e-47
XP_016874467 (OMIM: 132350) PREDICTED: syntaxin-2 ( 320) 1146 185.4 1.2e-46
XP_016874468 (OMIM: 132350) PREDICTED: syntaxin-2 ( 320) 1146 185.4 1.2e-46
NP_001971 (OMIM: 132350) syntaxin-2 isoform 1 [Hom ( 287) 1142 184.8 1.6e-46
NP_004594 (OMIM: 186590) syntaxin-1A isoform 1 [Ho ( 288) 1141 184.7 1.8e-46
XP_016874469 (OMIM: 132350) PREDICTED: syntaxin-2 ( 319) 1124 182.1 1.2e-45
XP_016874472 (OMIM: 132350) PREDICTED: syntaxin-2 ( 260) 1108 179.7 5.3e-45
XP_005253614 (OMIM: 132350) PREDICTED: syntaxin-2 ( 277) 1078 175.1 1.3e-43
NP_443106 (OMIM: 601485,616172) syntaxin-1B [Homo ( 288) 1078 175.1 1.4e-43
XP_016874471 (OMIM: 132350) PREDICTED: syntaxin-2 ( 309) 1060 172.4 9.5e-43
XP_016874470 (OMIM: 132350) PREDICTED: syntaxin-2 ( 317) 1058 172.1 1.2e-42
XP_016878382 (OMIM: 601485,616172) PREDICTED: synt ( 282) 1054 171.5 1.7e-42
NP_001159375 (OMIM: 186590) syntaxin-1A isoform 2 ( 251) 932 153.0 5.4e-37
XP_016868056 (OMIM: 186590) PREDICTED: syntaxin-1A ( 329) 932 153.0 6.9e-37
XP_016874473 (OMIM: 132350) PREDICTED: syntaxin-2 ( 214) 856 141.5 1.4e-33
XP_016874474 (OMIM: 132350) PREDICTED: syntaxin-2 ( 213) 834 138.1 1.4e-32
XP_016873685 (OMIM: 600876) PREDICTED: syntaxin-3 ( 155) 799 132.8 4.1e-31
NP_004595 (OMIM: 186591) syntaxin-4 isoform 3 [Hom ( 297) 697 117.4 3.2e-26
XP_005255578 (OMIM: 186591) PREDICTED: syntaxin-4 ( 293) 673 113.8 4e-25
NP_001259025 (OMIM: 186591) syntaxin-4 isoform 2 [ ( 295) 673 113.8 4e-25
NP_001259024 (OMIM: 186591) syntaxin-4 isoform 1 [ ( 219) 606 103.6 3.5e-22
XP_016874477 (OMIM: 132350) PREDICTED: syntaxin-2 ( 167) 575 98.9 7e-21
XP_016874475 (OMIM: 132350) PREDICTED: syntaxin-2 ( 200) 568 97.9 1.7e-20
XP_016874476 (OMIM: 132350) PREDICTED: syntaxin-2 ( 199) 557 96.2 5.4e-20
XP_011534520 (OMIM: 603552,605014) PREDICTED: synt ( 287) 462 81.9 1.6e-15
NP_003755 (OMIM: 603552,605014) syntaxin-11 [Homo ( 287) 462 81.9 1.6e-15
XP_011534516 (OMIM: 603552,605014) PREDICTED: synt ( 287) 462 81.9 1.6e-15
XP_016866889 (OMIM: 603552,605014) PREDICTED: synt ( 287) 462 81.9 1.6e-15
XP_011534519 (OMIM: 603552,605014) PREDICTED: synt ( 287) 462 81.9 1.6e-15
XP_011534515 (OMIM: 603552,605014) PREDICTED: synt ( 313) 462 81.9 1.7e-15
XP_011544227 (OMIM: 186591) PREDICTED: syntaxin-4 ( 154) 441 78.6 8.4e-15
NP_803173 (OMIM: 606892) syntaxin-12 [Homo sapiens ( 276) 321 60.5 4.2e-09
NP_003560 (OMIM: 603217) syntaxin-7 isoform a [Hom ( 261) 313 59.3 9.2e-09
NP_001313508 (OMIM: 603217) syntaxin-7 isoform a [ ( 261) 313 59.3 9.2e-09
NP_001313507 (OMIM: 603217) syntaxin-7 isoform a [ ( 261) 313 59.3 9.2e-09
XP_016874478 (OMIM: 132350) PREDICTED: syntaxin-2 ( 159) 293 56.2 4.8e-08
>>XP_005274252 (OMIM: 600876) PREDICTED: syntaxin-3 isof (289 aa)
initn: 1782 init1: 1782 opt: 1782 Z-score: 1479.7 bits: 281.7 E(85289): 1.1e-75
Smith-Waterman score: 1782; 100.0% identity (100.0% similar) in 289 aa overlap (1-289:1-289)
10 20 30 40 50 60
pF1KB6 MKDRLEQLKAKQLTQDDDTDAVEIAIDNTAFMDEFFSEIEETRLNIDKISEHVEEAKKLY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MKDRLEQLKAKQLTQDDDTDAVEIAIDNTAFMDEFFSEIEETRLNIDKISEHVEEAKKLY
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 SIILSAPIPEPKTKDDLEQLTTEIKKRANNVRNKLKSMEKHIEEDEVRSSADLRIRKSQH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SIILSAPIPEPKTKDDLEQLTTEIKKRANNVRNKLKSMEKHIEEDEVRSSADLRIRKSQH
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 SVLSRKFVEVMTKYNEAQVDFRERSKGRIQRQLEITGKKTTDEELEEMLESGNPAIFTSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SVLSRKFVEVMTKYNEAQVDFRERSKGRIQRQLEITGKKTTDEELEEMLESGNPAIFTSG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 IIDSQISKQALSEIEGRHKDIVRLESSIKELHDMFMDIAMLVENQGEMLDNIELNVMHTV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 IIDSQISKQALSEIEGRHKDIVRLESSIKELHDMFMDIAMLVENQGEMLDNIELNVMHTV
190 200 210 220 230 240
250 260 270 280
pF1KB6 DHVEKARDETKKAVKYQSQARKKLIIIIVLVVVLLGILALIIGLSVGLN
:::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DHVEKARDETKKAVKYQSQARKKLIIIIVLVVVLLGILALIIGLSVGLN
250 260 270 280
>>NP_004168 (OMIM: 600876) syntaxin-3 isoform 1 [Homo sa (289 aa)
initn: 1782 init1: 1782 opt: 1782 Z-score: 1479.7 bits: 281.7 E(85289): 1.1e-75
Smith-Waterman score: 1782; 100.0% identity (100.0% similar) in 289 aa overlap (1-289:1-289)
10 20 30 40 50 60
pF1KB6 MKDRLEQLKAKQLTQDDDTDAVEIAIDNTAFMDEFFSEIEETRLNIDKISEHVEEAKKLY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 MKDRLEQLKAKQLTQDDDTDAVEIAIDNTAFMDEFFSEIEETRLNIDKISEHVEEAKKLY
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 SIILSAPIPEPKTKDDLEQLTTEIKKRANNVRNKLKSMEKHIEEDEVRSSADLRIRKSQH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 SIILSAPIPEPKTKDDLEQLTTEIKKRANNVRNKLKSMEKHIEEDEVRSSADLRIRKSQH
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 SVLSRKFVEVMTKYNEAQVDFRERSKGRIQRQLEITGKKTTDEELEEMLESGNPAIFTSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 SVLSRKFVEVMTKYNEAQVDFRERSKGRIQRQLEITGKKTTDEELEEMLESGNPAIFTSG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 IIDSQISKQALSEIEGRHKDIVRLESSIKELHDMFMDIAMLVENQGEMLDNIELNVMHTV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 IIDSQISKQALSEIEGRHKDIVRLESSIKELHDMFMDIAMLVENQGEMLDNIELNVMHTV
190 200 210 220 230 240
250 260 270 280
pF1KB6 DHVEKARDETKKAVKYQSQARKKLIIIIVLVVVLLGILALIIGLSVGLN
:::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 DHVEKARDETKKAVKYQSQARKKLIIIIVLVVVLLGILALIIGLSVGLN
250 260 270 280
>>XP_016873677 (OMIM: 600876) PREDICTED: syntaxin-3 isof (281 aa)
initn: 1720 init1: 1720 opt: 1720 Z-score: 1429.1 bits: 272.3 E(85289): 7.3e-73
Smith-Waterman score: 1720; 100.0% identity (100.0% similar) in 279 aa overlap (11-289:3-281)
10 20 30 40 50 60
pF1KB6 MKDRLEQLKAKQLTQDDDTDAVEIAIDNTAFMDEFFSEIEETRLNIDKISEHVEEAKKLY
::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MMKQLTQDDDTDAVEIAIDNTAFMDEFFSEIEETRLNIDKISEHVEEAKKLY
10 20 30 40 50
70 80 90 100 110 120
pF1KB6 SIILSAPIPEPKTKDDLEQLTTEIKKRANNVRNKLKSMEKHIEEDEVRSSADLRIRKSQH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SIILSAPIPEPKTKDDLEQLTTEIKKRANNVRNKLKSMEKHIEEDEVRSSADLRIRKSQH
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB6 SVLSRKFVEVMTKYNEAQVDFRERSKGRIQRQLEITGKKTTDEELEEMLESGNPAIFTSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SVLSRKFVEVMTKYNEAQVDFRERSKGRIQRQLEITGKKTTDEELEEMLESGNPAIFTSG
120 130 140 150 160 170
190 200 210 220 230 240
pF1KB6 IIDSQISKQALSEIEGRHKDIVRLESSIKELHDMFMDIAMLVENQGEMLDNIELNVMHTV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IIDSQISKQALSEIEGRHKDIVRLESSIKELHDMFMDIAMLVENQGEMLDNIELNVMHTV
180 190 200 210 220 230
250 260 270 280
pF1KB6 DHVEKARDETKKAVKYQSQARKKLIIIIVLVVVLLGILALIIGLSVGLN
:::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DHVEKARDETKKAVKYQSQARKKLIIIIVLVVVLLGILALIIGLSVGLN
240 250 260 270 280
>>XP_016873680 (OMIM: 600876) PREDICTED: syntaxin-3 isof (281 aa)
initn: 1720 init1: 1720 opt: 1720 Z-score: 1429.1 bits: 272.3 E(85289): 7.3e-73
Smith-Waterman score: 1720; 100.0% identity (100.0% similar) in 279 aa overlap (11-289:3-281)
10 20 30 40 50 60
pF1KB6 MKDRLEQLKAKQLTQDDDTDAVEIAIDNTAFMDEFFSEIEETRLNIDKISEHVEEAKKLY
::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MMKQLTQDDDTDAVEIAIDNTAFMDEFFSEIEETRLNIDKISEHVEEAKKLY
10 20 30 40 50
70 80 90 100 110 120
pF1KB6 SIILSAPIPEPKTKDDLEQLTTEIKKRANNVRNKLKSMEKHIEEDEVRSSADLRIRKSQH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SIILSAPIPEPKTKDDLEQLTTEIKKRANNVRNKLKSMEKHIEEDEVRSSADLRIRKSQH
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB6 SVLSRKFVEVMTKYNEAQVDFRERSKGRIQRQLEITGKKTTDEELEEMLESGNPAIFTSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SVLSRKFVEVMTKYNEAQVDFRERSKGRIQRQLEITGKKTTDEELEEMLESGNPAIFTSG
120 130 140 150 160 170
190 200 210 220 230 240
pF1KB6 IIDSQISKQALSEIEGRHKDIVRLESSIKELHDMFMDIAMLVENQGEMLDNIELNVMHTV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IIDSQISKQALSEIEGRHKDIVRLESSIKELHDMFMDIAMLVENQGEMLDNIELNVMHTV
180 190 200 210 220 230
250 260 270 280
pF1KB6 DHVEKARDETKKAVKYQSQARKKLIIIIVLVVVLLGILALIIGLSVGLN
:::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DHVEKARDETKKAVKYQSQARKKLIIIIVLVVVLLGILALIIGLSVGLN
240 250 260 270 280
>>XP_016873679 (OMIM: 600876) PREDICTED: syntaxin-3 isof (281 aa)
initn: 1720 init1: 1720 opt: 1720 Z-score: 1429.1 bits: 272.3 E(85289): 7.3e-73
Smith-Waterman score: 1720; 100.0% identity (100.0% similar) in 279 aa overlap (11-289:3-281)
10 20 30 40 50 60
pF1KB6 MKDRLEQLKAKQLTQDDDTDAVEIAIDNTAFMDEFFSEIEETRLNIDKISEHVEEAKKLY
::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MMKQLTQDDDTDAVEIAIDNTAFMDEFFSEIEETRLNIDKISEHVEEAKKLY
10 20 30 40 50
70 80 90 100 110 120
pF1KB6 SIILSAPIPEPKTKDDLEQLTTEIKKRANNVRNKLKSMEKHIEEDEVRSSADLRIRKSQH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SIILSAPIPEPKTKDDLEQLTTEIKKRANNVRNKLKSMEKHIEEDEVRSSADLRIRKSQH
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB6 SVLSRKFVEVMTKYNEAQVDFRERSKGRIQRQLEITGKKTTDEELEEMLESGNPAIFTSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SVLSRKFVEVMTKYNEAQVDFRERSKGRIQRQLEITGKKTTDEELEEMLESGNPAIFTSG
120 130 140 150 160 170
190 200 210 220 230 240
pF1KB6 IIDSQISKQALSEIEGRHKDIVRLESSIKELHDMFMDIAMLVENQGEMLDNIELNVMHTV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IIDSQISKQALSEIEGRHKDIVRLESSIKELHDMFMDIAMLVENQGEMLDNIELNVMHTV
180 190 200 210 220 230
250 260 270 280
pF1KB6 DHVEKARDETKKAVKYQSQARKKLIIIIVLVVVLLGILALIIGLSVGLN
:::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DHVEKARDETKKAVKYQSQARKKLIIIIVLVVVLLGILALIIGLSVGLN
240 250 260 270 280
>>XP_016873678 (OMIM: 600876) PREDICTED: syntaxin-3 isof (281 aa)
initn: 1720 init1: 1720 opt: 1720 Z-score: 1429.1 bits: 272.3 E(85289): 7.3e-73
Smith-Waterman score: 1720; 100.0% identity (100.0% similar) in 279 aa overlap (11-289:3-281)
10 20 30 40 50 60
pF1KB6 MKDRLEQLKAKQLTQDDDTDAVEIAIDNTAFMDEFFSEIEETRLNIDKISEHVEEAKKLY
::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MMKQLTQDDDTDAVEIAIDNTAFMDEFFSEIEETRLNIDKISEHVEEAKKLY
10 20 30 40 50
70 80 90 100 110 120
pF1KB6 SIILSAPIPEPKTKDDLEQLTTEIKKRANNVRNKLKSMEKHIEEDEVRSSADLRIRKSQH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SIILSAPIPEPKTKDDLEQLTTEIKKRANNVRNKLKSMEKHIEEDEVRSSADLRIRKSQH
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB6 SVLSRKFVEVMTKYNEAQVDFRERSKGRIQRQLEITGKKTTDEELEEMLESGNPAIFTSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SVLSRKFVEVMTKYNEAQVDFRERSKGRIQRQLEITGKKTTDEELEEMLESGNPAIFTSG
120 130 140 150 160 170
190 200 210 220 230 240
pF1KB6 IIDSQISKQALSEIEGRHKDIVRLESSIKELHDMFMDIAMLVENQGEMLDNIELNVMHTV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IIDSQISKQALSEIEGRHKDIVRLESSIKELHDMFMDIAMLVENQGEMLDNIELNVMHTV
180 190 200 210 220 230
250 260 270 280
pF1KB6 DHVEKARDETKKAVKYQSQARKKLIIIIVLVVVLLGILALIIGLSVGLN
:::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DHVEKARDETKKAVKYQSQARKKLIIIIVLVVVLLGILALIIGLSVGLN
240 250 260 270 280
>>XP_005274255 (OMIM: 600876) PREDICTED: syntaxin-3 isof (287 aa)
initn: 1684 init1: 1684 opt: 1684 Z-score: 1399.5 bits: 266.9 E(85289): 3.2e-71
Smith-Waterman score: 1684; 95.8% identity (97.5% similar) in 283 aa overlap (1-283:1-283)
10 20 30 40 50 60
pF1KB6 MKDRLEQLKAKQLTQDDDTDAVEIAIDNTAFMDEFFSEIEETRLNIDKISEHVEEAKKLY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MKDRLEQLKAKQLTQDDDTDAVEIAIDNTAFMDEFFSEIEETRLNIDKISEHVEEAKKLY
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 SIILSAPIPEPKTKDDLEQLTTEIKKRANNVRNKLKSMEKHIEEDEVRSSADLRIRKSQH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SIILSAPIPEPKTKDDLEQLTTEIKKRANNVRNKLKSMEKHIEEDEVRSSADLRIRKSQH
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 SVLSRKFVEVMTKYNEAQVDFRERSKGRIQRQLEITGKKTTDEELEEMLESGNPAIFTSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SVLSRKFVEVMTKYNEAQVDFRERSKGRIQRQLEITGKKTTDEELEEMLESGNPAIFTSG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 IIDSQISKQALSEIEGRHKDIVRLESSIKELHDMFMDIAMLVENQGEMLDNIELNVMHTV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 IIDSQISKQALSEIEGRHKDIVRLESSIKELHDMFMDIAMLVENQGEMLDNIELNVMHTV
190 200 210 220 230 240
250 260 270 280
pF1KB6 DHVEKARDETKKAVKYQSQARKKLIIIIVLVVVLLGILALIIGLSVGLN
::::::::::::::::::::::: :.:.. ..: ::: ::
XP_005 DHVEKARDETKKAVKYQSQARKKKIMIMICCIILAIILASTIGSIFA
250 260 270 280
>>NP_001171511 (OMIM: 600876) syntaxin-3 isoform 2 [Homo (277 aa)
initn: 1651 init1: 1651 opt: 1654 Z-score: 1375.2 bits: 262.3 E(85289): 7.3e-70
Smith-Waterman score: 1654; 97.1% identity (98.9% similar) in 275 aa overlap (1-275:1-275)
10 20 30 40 50 60
pF1KB6 MKDRLEQLKAKQLTQDDDTDAVEIAIDNTAFMDEFFSEIEETRLNIDKISEHVEEAKKLY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MKDRLEQLKAKQLTQDDDTDAVEIAIDNTAFMDEFFSEIEETRLNIDKISEHVEEAKKLY
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 SIILSAPIPEPKTKDDLEQLTTEIKKRANNVRNKLKSMEKHIEEDEVRSSADLRIRKSQH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SIILSAPIPEPKTKDDLEQLTTEIKKRANNVRNKLKSMEKHIEEDEVRSSADLRIRKSQH
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 SVLSRKFVEVMTKYNEAQVDFRERSKGRIQRQLEITGKKTTDEELEEMLESGNPAIFTSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SVLSRKFVEVMTKYNEAQVDFRERSKGRIQRQLEITGKKTTDEELEEMLESGNPAIFTSG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 IIDSQISKQALSEIEGRHKDIVRLESSIKELHDMFMDIAMLVENQGEMLDNIELNVMHTV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IIDSQISKQALSEIEGRHKDIVRLESSIKELHDMFMDIAMLVENQGEMLDNIELNVMHTV
190 200 210 220 230 240
250 260 270 280
pF1KB6 DHVEKARDETKKAVKYQSQARKKLIIIIVLVVVLLGILALIIGLSVGLN
::::::::::::::::::::::::: . . :..:.
NP_001 DHVEKARDETKKAVKYQSQARKKLISLQTGVATLVFR
250 260 270
>>XP_016873681 (OMIM: 600876) PREDICTED: syntaxin-3 isof (279 aa)
initn: 1622 init1: 1622 opt: 1622 Z-score: 1349.0 bits: 257.5 E(85289): 2.1e-68
Smith-Waterman score: 1622; 95.6% identity (97.4% similar) in 273 aa overlap (11-283:3-275)
10 20 30 40 50 60
pF1KB6 MKDRLEQLKAKQLTQDDDTDAVEIAIDNTAFMDEFFSEIEETRLNIDKISEHVEEAKKLY
::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MMKQLTQDDDTDAVEIAIDNTAFMDEFFSEIEETRLNIDKISEHVEEAKKLY
10 20 30 40 50
70 80 90 100 110 120
pF1KB6 SIILSAPIPEPKTKDDLEQLTTEIKKRANNVRNKLKSMEKHIEEDEVRSSADLRIRKSQH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SIILSAPIPEPKTKDDLEQLTTEIKKRANNVRNKLKSMEKHIEEDEVRSSADLRIRKSQH
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB6 SVLSRKFVEVMTKYNEAQVDFRERSKGRIQRQLEITGKKTTDEELEEMLESGNPAIFTSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SVLSRKFVEVMTKYNEAQVDFRERSKGRIQRQLEITGKKTTDEELEEMLESGNPAIFTSG
120 130 140 150 160 170
190 200 210 220 230 240
pF1KB6 IIDSQISKQALSEIEGRHKDIVRLESSIKELHDMFMDIAMLVENQGEMLDNIELNVMHTV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IIDSQISKQALSEIEGRHKDIVRLESSIKELHDMFMDIAMLVENQGEMLDNIELNVMHTV
180 190 200 210 220 230
250 260 270 280
pF1KB6 DHVEKARDETKKAVKYQSQARKKLIIIIVLVVVLLGILALIIGLSVGLN
::::::::::::::::::::::: :.:.. ..: ::: ::
XP_016 DHVEKARDETKKAVKYQSQARKKKIMIMICCIILAIILASTIGSIFA
240 250 260 270
>>XP_016873682 (OMIM: 600876) PREDICTED: syntaxin-3 isof (279 aa)
initn: 1622 init1: 1622 opt: 1622 Z-score: 1349.0 bits: 257.5 E(85289): 2.1e-68
Smith-Waterman score: 1622; 95.6% identity (97.4% similar) in 273 aa overlap (11-283:3-275)
10 20 30 40 50 60
pF1KB6 MKDRLEQLKAKQLTQDDDTDAVEIAIDNTAFMDEFFSEIEETRLNIDKISEHVEEAKKLY
::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MMKQLTQDDDTDAVEIAIDNTAFMDEFFSEIEETRLNIDKISEHVEEAKKLY
10 20 30 40 50
70 80 90 100 110 120
pF1KB6 SIILSAPIPEPKTKDDLEQLTTEIKKRANNVRNKLKSMEKHIEEDEVRSSADLRIRKSQH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SIILSAPIPEPKTKDDLEQLTTEIKKRANNVRNKLKSMEKHIEEDEVRSSADLRIRKSQH
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB6 SVLSRKFVEVMTKYNEAQVDFRERSKGRIQRQLEITGKKTTDEELEEMLESGNPAIFTSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SVLSRKFVEVMTKYNEAQVDFRERSKGRIQRQLEITGKKTTDEELEEMLESGNPAIFTSG
120 130 140 150 160 170
190 200 210 220 230 240
pF1KB6 IIDSQISKQALSEIEGRHKDIVRLESSIKELHDMFMDIAMLVENQGEMLDNIELNVMHTV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IIDSQISKQALSEIEGRHKDIVRLESSIKELHDMFMDIAMLVENQGEMLDNIELNVMHTV
180 190 200 210 220 230
250 260 270 280
pF1KB6 DHVEKARDETKKAVKYQSQARKKLIIIIVLVVVLLGILALIIGLSVGLN
::::::::::::::::::::::: :.:.. ..: ::: ::
XP_016 DHVEKARDETKKAVKYQSQARKKKIMIMICCIILAIILASTIGSIFA
240 250 260 270
289 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 22:44:06 2016 done: Fri Nov 4 22:44:07 2016
Total Scan time: 7.090 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]