Result of FASTA (ccds) for
pF1KB5988
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB5988, 558 aa
1>>>pF1KB5988 558 - 558 aa - 558 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.6253+/-0.00127; mu= 11.0129+/- 0.076
mean_var=67.9358+/-13.638, 0's: 0 Z-trim(100.2): 61 B-trim: 184 in 1/48
Lambda= 0.155606
statistics sampled from 5971 (6026) to 5971 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.529), E-opt: 0.2 (0.185), width: 16
Scan time: 3.330
The best scores are: opt bits E(32554)
CCDS43254.1 RAP1GDS1 gene_id:5910|Hs108|chr4 ( 558) 3494 794.0 0
CCDS47107.1 RAP1GDS1 gene_id:5910|Hs108|chr4 ( 559) 3487 792.4 0
CCDS43253.1 RAP1GDS1 gene_id:5910|Hs108|chr4 ( 607) 2737 624.1 1.5e-178
CCDS47105.1 RAP1GDS1 gene_id:5910|Hs108|chr4 ( 608) 2737 624.1 1.5e-178
CCDS47106.1 RAP1GDS1 gene_id:5910|Hs108|chr4 ( 607) 2720 620.2 2.1e-177
CCDS47108.1 RAP1GDS1 gene_id:5910|Hs108|chr4 ( 516) 2485 567.5 1.4e-161
>>CCDS43254.1 RAP1GDS1 gene_id:5910|Hs108|chr4 (558 aa)
initn: 3494 init1: 3494 opt: 3494 Z-score: 4238.1 bits: 794.0 E(32554): 0
Smith-Waterman score: 3494; 100.0% identity (100.0% similar) in 558 aa overlap (1-558:1-558)
10 20 30 40 50 60
pF1KB5 MDNLSDTLKKLKITAVDKTEDSLEGCLDCLLQALAQNNTETSEKIQASGILQLFASLLTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 MDNLSDTLKKLKITAVDKTEDSLEGCLDCLLQALAQNNTETSEKIQASGILQLFASLLTP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 QSSCKAKVANIIAEVAKNEFMRIPCVDAGLISPLVQLLNSKDQEVLLQTGRALGNICYDS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 QSSCKAKVANIIAEVAKNEFMRIPCVDAGLISPLVQLLNSKDQEVLLQTGRALGNICYDS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 HSLQAQLINMGVIPTLVKLLGIHCQNAALTEMCLVAFGNLAELESSKEQFASTNIAEELV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 HSLQAQLINMGVIPTLVKLLGIHCQNAALTEMCLVAFGNLAELESSKEQFASTNIAEELV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 KLFKKQIEHDKREMIFEVLAPLAENDAIKLQLVEAGLVECLLEIVQQKVDSDKEDDITEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 KLFKKQIEHDKREMIFEVLAPLAENDAIKLQLVEAGLVECLLEIVQQKVDSDKEDDITEL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 KTGSDLMVLLLLGDESMQKLFEGGKGSVFQRVLSWIPSNNHQLQLAGALAIANFARNDAN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 KTGSDLMVLLLLGDESMQKLFEGGKGSVFQRVLSWIPSNNHQLQLAGALAIANFARNDAN
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 CIHMVDNGIVEKLMDLLDRHVEDGNVTVQHAALSALRNLAIPVINKAKMLSAGVTEAVLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 CIHMVDNGIVEKLMDLLDRHVEDGNVTVQHAALSALRNLAIPVINKAKMLSAGVTEAVLK
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB5 FLKSEMPPVQFKLLGTLRMLIDAQAEAAEQLGKNVKLVERLVEWCEAKDHAGVMGESNRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 FLKSEMPPVQFKLLGTLRMLIDAQAEAAEQLGKNVKLVERLVEWCEAKDHAGVMGESNRL
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB5 LSALIRHSKSKDVIKTIVQSGGIKHLVTMATSEHVIMQNEALVALALIAALELGTAEKDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 LSALIRHSKSKDVIKTIVQSGGIKHLVTMATSEHVIMQNEALVALALIAALELGTAEKDL
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB5 ESAKLVQILHRLLADERSAPEIKYNSMVLICALMGSECLHKEVQDLAFLDVVSKLRSHEN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 ESAKLVQILHRLLADERSAPEIKYNSMVLICALMGSECLHKEVQDLAFLDVVSKLRSHEN
490 500 510 520 530 540
550
pF1KB5 KSVAQQASLTEQRLTVES
::::::::::::::::::
CCDS43 KSVAQQASLTEQRLTVES
550
>>CCDS47107.1 RAP1GDS1 gene_id:5910|Hs108|chr4 (559 aa)
initn: 3487 init1: 3487 opt: 3487 Z-score: 4229.5 bits: 792.4 E(32554): 0
Smith-Waterman score: 3487; 100.0% identity (100.0% similar) in 557 aa overlap (2-558:3-559)
10 20 30 40 50
pF1KB5 MDNLSDTLKKLKITAVDKTEDSLEGCLDCLLQALAQNNTETSEKIQASGILQLFASLLT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 MADNLSDTLKKLKITAVDKTEDSLEGCLDCLLQALAQNNTETSEKIQASGILQLFASLLT
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB5 PQSSCKAKVANIIAEVAKNEFMRIPCVDAGLISPLVQLLNSKDQEVLLQTGRALGNICYD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 PQSSCKAKVANIIAEVAKNEFMRIPCVDAGLISPLVQLLNSKDQEVLLQTGRALGNICYD
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB5 SHSLQAQLINMGVIPTLVKLLGIHCQNAALTEMCLVAFGNLAELESSKEQFASTNIAEEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 SHSLQAQLINMGVIPTLVKLLGIHCQNAALTEMCLVAFGNLAELESSKEQFASTNIAEEL
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB5 VKLFKKQIEHDKREMIFEVLAPLAENDAIKLQLVEAGLVECLLEIVQQKVDSDKEDDITE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 VKLFKKQIEHDKREMIFEVLAPLAENDAIKLQLVEAGLVECLLEIVQQKVDSDKEDDITE
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB5 LKTGSDLMVLLLLGDESMQKLFEGGKGSVFQRVLSWIPSNNHQLQLAGALAIANFARNDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 LKTGSDLMVLLLLGDESMQKLFEGGKGSVFQRVLSWIPSNNHQLQLAGALAIANFARNDA
250 260 270 280 290 300
300 310 320 330 340 350
pF1KB5 NCIHMVDNGIVEKLMDLLDRHVEDGNVTVQHAALSALRNLAIPVINKAKMLSAGVTEAVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 NCIHMVDNGIVEKLMDLLDRHVEDGNVTVQHAALSALRNLAIPVINKAKMLSAGVTEAVL
310 320 330 340 350 360
360 370 380 390 400 410
pF1KB5 KFLKSEMPPVQFKLLGTLRMLIDAQAEAAEQLGKNVKLVERLVEWCEAKDHAGVMGESNR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 KFLKSEMPPVQFKLLGTLRMLIDAQAEAAEQLGKNVKLVERLVEWCEAKDHAGVMGESNR
370 380 390 400 410 420
420 430 440 450 460 470
pF1KB5 LLSALIRHSKSKDVIKTIVQSGGIKHLVTMATSEHVIMQNEALVALALIAALELGTAEKD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 LLSALIRHSKSKDVIKTIVQSGGIKHLVTMATSEHVIMQNEALVALALIAALELGTAEKD
430 440 450 460 470 480
480 490 500 510 520 530
pF1KB5 LESAKLVQILHRLLADERSAPEIKYNSMVLICALMGSECLHKEVQDLAFLDVVSKLRSHE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 LESAKLVQILHRLLADERSAPEIKYNSMVLICALMGSECLHKEVQDLAFLDVVSKLRSHE
490 500 510 520 530 540
540 550
pF1KB5 NKSVAQQASLTEQRLTVES
:::::::::::::::::::
CCDS47 NKSVAQQASLTEQRLTVES
550
>>CCDS43253.1 RAP1GDS1 gene_id:5910|Hs108|chr4 (607 aa)
initn: 2734 init1: 2734 opt: 2737 Z-score: 3318.9 bits: 624.1 E(32554): 1.5e-178
Smith-Waterman score: 3285; 91.7% identity (91.7% similar) in 590 aa overlap (18-558:18-607)
10 20 30 40 50 60
pF1KB5 MDNLSDTLKKLKITAVDKTEDSLEGCLDCLLQALAQNNTETSEKIQASGILQLFASLLTP
:::::::::::::::::::::::::::::::::::::::::::
CCDS43 MDNLSDTLKKLKITAVDKTEDSLEGCLDCLLQALAQNNTETSEKIQASGILQLFASLLTP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 QSSCKAKVANIIAEVAKNEFMRIPCVDAGLISPLVQLLNSKDQEVLLQTGRALGNICYDS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 QSSCKAKVANIIAEVAKNEFMRIPCVDAGLISPLVQLLNSKDQEVLLQTGRALGNICYDS
70 80 90 100 110 120
130
pF1KB5 H-------------------------------------------------SLQAQLINMG
: ::::::::::
CCDS43 HEGRSAVDQAGGAQIVIDHLRSLCSITDPANEKLLTVFCGMLMNYSNENDSLQAQLINMG
130 140 150 160 170 180
140 150 160 170 180 190
pF1KB5 VIPTLVKLLGIHCQNAALTEMCLVAFGNLAELESSKEQFASTNIAEELVKLFKKQIEHDK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 VIPTLVKLLGIHCQNAALTEMCLVAFGNLAELESSKEQFASTNIAEELVKLFKKQIEHDK
190 200 210 220 230 240
200 210 220 230 240 250
pF1KB5 REMIFEVLAPLAENDAIKLQLVEAGLVECLLEIVQQKVDSDKEDDITELKTGSDLMVLLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 REMIFEVLAPLAENDAIKLQLVEAGLVECLLEIVQQKVDSDKEDDITELKTGSDLMVLLL
250 260 270 280 290 300
260 270 280 290 300 310
pF1KB5 LGDESMQKLFEGGKGSVFQRVLSWIPSNNHQLQLAGALAIANFARNDANCIHMVDNGIVE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 LGDESMQKLFEGGKGSVFQRVLSWIPSNNHQLQLAGALAIANFARNDANCIHMVDNGIVE
310 320 330 340 350 360
320 330 340 350 360 370
pF1KB5 KLMDLLDRHVEDGNVTVQHAALSALRNLAIPVINKAKMLSAGVTEAVLKFLKSEMPPVQF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 KLMDLLDRHVEDGNVTVQHAALSALRNLAIPVINKAKMLSAGVTEAVLKFLKSEMPPVQF
370 380 390 400 410 420
380 390 400 410 420 430
pF1KB5 KLLGTLRMLIDAQAEAAEQLGKNVKLVERLVEWCEAKDHAGVMGESNRLLSALIRHSKSK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 KLLGTLRMLIDAQAEAAEQLGKNVKLVERLVEWCEAKDHAGVMGESNRLLSALIRHSKSK
430 440 450 460 470 480
440 450 460 470 480 490
pF1KB5 DVIKTIVQSGGIKHLVTMATSEHVIMQNEALVALALIAALELGTAEKDLESAKLVQILHR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 DVIKTIVQSGGIKHLVTMATSEHVIMQNEALVALALIAALELGTAEKDLESAKLVQILHR
490 500 510 520 530 540
500 510 520 530 540 550
pF1KB5 LLADERSAPEIKYNSMVLICALMGSECLHKEVQDLAFLDVVSKLRSHENKSVAQQASLTE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 LLADERSAPEIKYNSMVLICALMGSECLHKEVQDLAFLDVVSKLRSHENKSVAQQASLTE
550 560 570 580 590 600
pF1KB5 QRLTVES
:::::::
CCDS43 QRLTVES
>>CCDS47105.1 RAP1GDS1 gene_id:5910|Hs108|chr4 (608 aa)
initn: 2734 init1: 2734 opt: 2737 Z-score: 3318.9 bits: 624.1 E(32554): 1.5e-178
Smith-Waterman score: 3285; 91.7% identity (91.7% similar) in 590 aa overlap (18-558:19-608)
10 20 30 40 50
pF1KB5 MDNLSDTLKKLKITAVDKTEDSLEGCLDCLLQALAQNNTETSEKIQASGILQLFASLLT
::::::::::::::::::::::::::::::::::::::::::
CCDS47 MADNLSDTLKKLKITAVDKTEDSLEGCLDCLLQALAQNNTETSEKIQASGILQLFASLLT
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB5 PQSSCKAKVANIIAEVAKNEFMRIPCVDAGLISPLVQLLNSKDQEVLLQTGRALGNICYD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 PQSSCKAKVANIIAEVAKNEFMRIPCVDAGLISPLVQLLNSKDQEVLLQTGRALGNICYD
70 80 90 100 110 120
120 130
pF1KB5 SH-------------------------------------------------SLQAQLINM
:: :::::::::
CCDS47 SHEGRSAVDQAGGAQIVIDHLRSLCSITDPANEKLLTVFCGMLMNYSNENDSLQAQLINM
130 140 150 160 170 180
140 150 160 170 180 190
pF1KB5 GVIPTLVKLLGIHCQNAALTEMCLVAFGNLAELESSKEQFASTNIAEELVKLFKKQIEHD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 GVIPTLVKLLGIHCQNAALTEMCLVAFGNLAELESSKEQFASTNIAEELVKLFKKQIEHD
190 200 210 220 230 240
200 210 220 230 240 250
pF1KB5 KREMIFEVLAPLAENDAIKLQLVEAGLVECLLEIVQQKVDSDKEDDITELKTGSDLMVLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 KREMIFEVLAPLAENDAIKLQLVEAGLVECLLEIVQQKVDSDKEDDITELKTGSDLMVLL
250 260 270 280 290 300
260 270 280 290 300 310
pF1KB5 LLGDESMQKLFEGGKGSVFQRVLSWIPSNNHQLQLAGALAIANFARNDANCIHMVDNGIV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 LLGDESMQKLFEGGKGSVFQRVLSWIPSNNHQLQLAGALAIANFARNDANCIHMVDNGIV
310 320 330 340 350 360
320 330 340 350 360 370
pF1KB5 EKLMDLLDRHVEDGNVTVQHAALSALRNLAIPVINKAKMLSAGVTEAVLKFLKSEMPPVQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 EKLMDLLDRHVEDGNVTVQHAALSALRNLAIPVINKAKMLSAGVTEAVLKFLKSEMPPVQ
370 380 390 400 410 420
380 390 400 410 420 430
pF1KB5 FKLLGTLRMLIDAQAEAAEQLGKNVKLVERLVEWCEAKDHAGVMGESNRLLSALIRHSKS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 FKLLGTLRMLIDAQAEAAEQLGKNVKLVERLVEWCEAKDHAGVMGESNRLLSALIRHSKS
430 440 450 460 470 480
440 450 460 470 480 490
pF1KB5 KDVIKTIVQSGGIKHLVTMATSEHVIMQNEALVALALIAALELGTAEKDLESAKLVQILH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 KDVIKTIVQSGGIKHLVTMATSEHVIMQNEALVALALIAALELGTAEKDLESAKLVQILH
490 500 510 520 530 540
500 510 520 530 540 550
pF1KB5 RLLADERSAPEIKYNSMVLICALMGSECLHKEVQDLAFLDVVSKLRSHENKSVAQQASLT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 RLLADERSAPEIKYNSMVLICALMGSECLHKEVQDLAFLDVVSKLRSHENKSVAQQASLT
550 560 570 580 590 600
pF1KB5 EQRLTVES
::::::::
CCDS47 EQRLTVES
>>CCDS47106.1 RAP1GDS1 gene_id:5910|Hs108|chr4 (607 aa)
initn: 2484 init1: 1661 opt: 2720 Z-score: 3298.3 bits: 620.2 E(32554): 2.1e-177
Smith-Waterman score: 3268; 91.5% identity (91.5% similar) in 590 aa overlap (18-558:19-607)
10 20 30 40 50
pF1KB5 MDNLSDTLKKLKITAVDKTEDSLEGCLDCLLQALAQNNTETSEKIQASGILQLFASLLT
::::::::::::::::::::::::::::::::::::::::::
CCDS47 MADNLSDTLKKLKITAVDKTEDSLEGCLDCLLQALAQNNTETSEKIQASGILQLFASLLT
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB5 PQSSCKAKVANIIAEVAKNEFMRIPCVDAGLISPLVQLLNSKDQEVLLQTGRALGNICYD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 PQSSCKAKVANIIAEVAKNEFMRIPCVDAGLISPLVQLLNSKDQEVLLQTGRALGNICYD
70 80 90 100 110 120
120 130
pF1KB5 SH-------------------------------------------------SLQAQLINM
:: :::::::::
CCDS47 SHEGRSAVDQAGGAQIVIDHLRSLCSITDPANEKLLTVFCGMLMNYSNENDSLQAQLINM
130 140 150 160 170 180
140 150 160 170 180 190
pF1KB5 GVIPTLVKLLGIHCQNAALTEMCLVAFGNLAELESSKEQFASTNIAEELVKLFKKQIEHD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 GVIPTLVKLLGIHCQNAALTEMCLVAFGNLAELESSKEQFASTNIAEELVKLFKKQIEHD
190 200 210 220 230 240
200 210 220 230 240 250
pF1KB5 KREMIFEVLAPLAENDAIKLQLVEAGLVECLLEIVQQKVDSDKEDDITELKTGSDLMVLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 KREMIFEVLAPLAENDAIKLQLVEAGLVECLLEIVQQKVDSDKEDDITELKTGSDLMVLL
250 260 270 280 290 300
260 270 280 290 300 310
pF1KB5 LLGDESMQKLFEGGKGSVFQRVLSWIPSNNHQLQLAGALAIANFARNDANCIHMVDNGIV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 LLGDESMQKLFEGGKGSVFQRVLSWIPSNNHQLQLAGALAIANFARNDANCIHMVDNGIV
310 320 330 340 350 360
320 330 340 350 360 370
pF1KB5 EKLMDLLDRHVEDGNVTVQHAALSALRNLAIPVINKAKMLSAGVTEAVLKFLKSEMPPVQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 EKLMDLLDRHVEDGNVTVQHAALSALRNLAIPVINKAKMLSAGVTEAVLKFLKSEMPPVQ
370 380 390 400 410 420
380 390 400 410 420 430
pF1KB5 FKLLGTLRMLIDAQAEAAEQLGKNVKLVERLVEWCEAKDHAGVMGESNRLLSALIRHSKS
:::::::::::::: :::::::::::::::::::::::::::::::::::::::::::::
CCDS47 FKLLGTLRMLIDAQ-EAAEQLGKNVKLVERLVEWCEAKDHAGVMGESNRLLSALIRHSKS
430 440 450 460 470
440 450 460 470 480 490
pF1KB5 KDVIKTIVQSGGIKHLVTMATSEHVIMQNEALVALALIAALELGTAEKDLESAKLVQILH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 KDVIKTIVQSGGIKHLVTMATSEHVIMQNEALVALALIAALELGTAEKDLESAKLVQILH
480 490 500 510 520 530
500 510 520 530 540 550
pF1KB5 RLLADERSAPEIKYNSMVLICALMGSECLHKEVQDLAFLDVVSKLRSHENKSVAQQASLT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 RLLADERSAPEIKYNSMVLICALMGSECLHKEVQDLAFLDVVSKLRSHENKSVAQQASLT
540 550 560 570 580 590
pF1KB5 EQRLTVES
::::::::
CCDS47 EQRLTVES
600
>>CCDS47108.1 RAP1GDS1 gene_id:5910|Hs108|chr4 (516 aa)
initn: 2456 init1: 2456 opt: 2485 Z-score: 3014.5 bits: 567.5 E(32554): 1.4e-161
Smith-Waterman score: 3110; 92.1% identity (92.3% similar) in 557 aa overlap (2-558:3-516)
10 20 30 40 50
pF1KB5 MDNLSDTLKKLKITAVDKTEDSLEGCLDCLLQALAQNNTETSEKIQASGILQLFASLLT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 MADNLSDTLKKLKITAVDKTEDSLEGCLDCLLQALAQNNTETSEKIQASGILQLFASLLT
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB5 PQSSCKAKVANIIAEVAKNEFMRIPCVDAGLISPLVQLLNSKDQEVLLQTGRALGNICYD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 PQSSCKAKVANIIAEVAKNEFMRIPCVDAGLISPLVQLLNSKDQEVLLQTGRALGNICYD
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB5 SHSLQAQLINMGVIPTLVKLLGIHCQNAALTEMCLVAFGNLAELESSKEQFASTNIAEEL
: .:::::::::::::::
CCDS47 S-------------------------------------------QSSKEQFASTNIAEEL
130
180 190 200 210 220 230
pF1KB5 VKLFKKQIEHDKREMIFEVLAPLAENDAIKLQLVEAGLVECLLEIVQQKVDSDKEDDITE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 VKLFKKQIEHDKREMIFEVLAPLAENDAIKLQLVEAGLVECLLEIVQQKVDSDKEDDITE
140 150 160 170 180 190
240 250 260 270 280 290
pF1KB5 LKTGSDLMVLLLLGDESMQKLFEGGKGSVFQRVLSWIPSNNHQLQLAGALAIANFARNDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 LKTGSDLMVLLLLGDESMQKLFEGGKGSVFQRVLSWIPSNNHQLQLAGALAIANFARNDA
200 210 220 230 240 250
300 310 320 330 340 350
pF1KB5 NCIHMVDNGIVEKLMDLLDRHVEDGNVTVQHAALSALRNLAIPVINKAKMLSAGVTEAVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 NCIHMVDNGIVEKLMDLLDRHVEDGNVTVQHAALSALRNLAIPVINKAKMLSAGVTEAVL
260 270 280 290 300 310
360 370 380 390 400 410
pF1KB5 KFLKSEMPPVQFKLLGTLRMLIDAQAEAAEQLGKNVKLVERLVEWCEAKDHAGVMGESNR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 KFLKSEMPPVQFKLLGTLRMLIDAQAEAAEQLGKNVKLVERLVEWCEAKDHAGVMGESNR
320 330 340 350 360 370
420 430 440 450 460 470
pF1KB5 LLSALIRHSKSKDVIKTIVQSGGIKHLVTMATSEHVIMQNEALVALALIAALELGTAEKD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 LLSALIRHSKSKDVIKTIVQSGGIKHLVTMATSEHVIMQNEALVALALIAALELGTAEKD
380 390 400 410 420 430
480 490 500 510 520 530
pF1KB5 LESAKLVQILHRLLADERSAPEIKYNSMVLICALMGSECLHKEVQDLAFLDVVSKLRSHE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 LESAKLVQILHRLLADERSAPEIKYNSMVLICALMGSECLHKEVQDLAFLDVVSKLRSHE
440 450 460 470 480 490
540 550
pF1KB5 NKSVAQQASLTEQRLTVES
:::::::::::::::::::
CCDS47 NKSVAQQASLTEQRLTVES
500 510
558 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 21:44:40 2016 done: Fri Nov 4 21:44:40 2016
Total Scan time: 3.330 Total Display time: 0.080
Function used was FASTA [36.3.4 Apr, 2011]