Result of FASTA (ccds) for
pF1KB5983
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB5983, 521 aa
1>>>pF1KB5983 521 - 521 aa - 521 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 8.5544+/-0.000857; mu= 4.6026+/- 0.052
mean_var=171.3218+/-33.961, 0's: 0 Z-trim(113.6): 14 B-trim: 91 in 1/51
Lambda= 0.097987
statistics sampled from 14222 (14235) to 14222 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.762), E-opt: 0.2 (0.437), width: 16
Scan time: 3.910
The best scores are: opt bits E(32554)
CCDS14147.1 MSL3 gene_id:10943|Hs108|chrX ( 521) 3481 504.0 1.7e-142
CCDS55369.1 MSL3 gene_id:10943|Hs108|chrX ( 509) 3252 471.6 9.5e-133
CCDS14148.1 MSL3 gene_id:10943|Hs108|chrX ( 416) 2586 377.4 1.8e-104
CCDS65213.1 MSL3 gene_id:10943|Hs108|chrX ( 372) 2447 357.7 1.3e-98
CCDS14149.1 MSL3 gene_id:10943|Hs108|chrX ( 355) 2375 347.5 1.5e-95
>>CCDS14147.1 MSL3 gene_id:10943|Hs108|chrX (521 aa)
initn: 3481 init1: 3481 opt: 3481 Z-score: 2671.5 bits: 504.0 E(32554): 1.7e-142
Smith-Waterman score: 3481; 100.0% identity (100.0% similar) in 521 aa overlap (1-521:1-521)
10 20 30 40 50 60
pF1KB5 MSASEGMKFKFHSGEKVLCFEPDPTKARVLYDAKIVDVIVGKDEKGRKIPEYLIHFNGWN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 MSASEGMKFKFHSGEKVLCFEPDPTKARVLYDAKIVDVIVGKDEKGRKIPEYLIHFNGWN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 RSWDRWAAEDHVLRDTDENRRLQRKLARKAVARLRSTGRKKKRCRLPGVDSVLKGLPTEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 RSWDRWAAEDHVLRDTDENRRLQRKLARKAVARLRSTGRKKKRCRLPGVDSVLKGLPTEE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 KDENDENSLSSSSDCSENKDEEISEESDIEEKTEVKEEPELQTRREMEERTITIEIPEVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 KDENDENSLSSSSDCSENKDEEISEESDIEEKTEVKEEPELQTRREMEERTITIEIPEVL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 KKQLEDDCYYINRRKRLVKLPCQTNIITILESYVKHFAINAAFSANERPRHHHVMPHANM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 KKQLEDDCYYINRRKRLVKLPCQTNIITILESYVKHFAINAAFSANERPRHHHVMPHANM
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 NVHYIPAEKNVDLCKEMVDGLRITFDYTLPLVLLYPYEQAQYKKVTSSKFFLPIKESATS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 NVHYIPAEKNVDLCKEMVDGLRITFDYTLPLVLLYPYEQAQYKKVTSSKFFLPIKESATS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 TNRSQEELSPSPPLLNPSTPQSTESQPTTGEPATPKRRKAEPEALQSLRRSTRHSANCDR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 TNRSQEELSPSPPLLNPSTPQSTESQPTTGEPATPKRRKAEPEALQSLRRSTRHSANCDR
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB5 LSESSASPQPKRRQQDTSASMPKLFLHLEKKTPVHSRSSSPIPLTPSKEGSAVFAGFEGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 LSESSASPQPKRRQQDTSASMPKLFLHLEKKTPVHSRSSSPIPLTPSKEGSAVFAGFEGR
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB5 RTNEINEVLSWKLVPDNYPPGDQPPPPSYIYGAQHLLRLFVKLPEILGKMSFSEKNLKAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 RTNEINEVLSWKLVPDNYPPGDQPPPPSYIYGAQHLLRLFVKLPEILGKMSFSEKNLKAL
430 440 450 460 470 480
490 500 510 520
pF1KB5 LKHFDLFLRFLAEYHDDFFPESAYVAACEAHYSTKNPRAIY
:::::::::::::::::::::::::::::::::::::::::
CCDS14 LKHFDLFLRFLAEYHDDFFPESAYVAACEAHYSTKNPRAIY
490 500 510 520
>>CCDS55369.1 MSL3 gene_id:10943|Hs108|chrX (509 aa)
initn: 3252 init1: 3252 opt: 3252 Z-score: 2496.7 bits: 471.6 E(32554): 9.5e-133
Smith-Waterman score: 3252; 99.8% identity (100.0% similar) in 488 aa overlap (34-521:22-509)
10 20 30 40 50 60
pF1KB5 SEGMKFKFHSGEKVLCFEPDPTKARVLYDAKIVDVIVGKDEKGRKIPEYLIHFNGWNRSW
.:::::::::::::::::::::::::::::
CCDS55 MSPSVRPGAGWAPVGRPGRPIQIVDVIVGKDEKGRKIPEYLIHFNGWNRSW
10 20 30 40 50
70 80 90 100 110 120
pF1KB5 DRWAAEDHVLRDTDENRRLQRKLARKAVARLRSTGRKKKRCRLPGVDSVLKGLPTEEKDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 DRWAAEDHVLRDTDENRRLQRKLARKAVARLRSTGRKKKRCRLPGVDSVLKGLPTEEKDE
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB5 NDENSLSSSSDCSENKDEEISEESDIEEKTEVKEEPELQTRREMEERTITIEIPEVLKKQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 NDENSLSSSSDCSENKDEEISEESDIEEKTEVKEEPELQTRREMEERTITIEIPEVLKKQ
120 130 140 150 160 170
190 200 210 220 230 240
pF1KB5 LEDDCYYINRRKRLVKLPCQTNIITILESYVKHFAINAAFSANERPRHHHVMPHANMNVH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 LEDDCYYINRRKRLVKLPCQTNIITILESYVKHFAINAAFSANERPRHHHVMPHANMNVH
180 190 200 210 220 230
250 260 270 280 290 300
pF1KB5 YIPAEKNVDLCKEMVDGLRITFDYTLPLVLLYPYEQAQYKKVTSSKFFLPIKESATSTNR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 YIPAEKNVDLCKEMVDGLRITFDYTLPLVLLYPYEQAQYKKVTSSKFFLPIKESATSTNR
240 250 260 270 280 290
310 320 330 340 350 360
pF1KB5 SQEELSPSPPLLNPSTPQSTESQPTTGEPATPKRRKAEPEALQSLRRSTRHSANCDRLSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 SQEELSPSPPLLNPSTPQSTESQPTTGEPATPKRRKAEPEALQSLRRSTRHSANCDRLSE
300 310 320 330 340 350
370 380 390 400 410 420
pF1KB5 SSASPQPKRRQQDTSASMPKLFLHLEKKTPVHSRSSSPIPLTPSKEGSAVFAGFEGRRTN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 SSASPQPKRRQQDTSASMPKLFLHLEKKTPVHSRSSSPIPLTPSKEGSAVFAGFEGRRTN
360 370 380 390 400 410
430 440 450 460 470 480
pF1KB5 EINEVLSWKLVPDNYPPGDQPPPPSYIYGAQHLLRLFVKLPEILGKMSFSEKNLKALLKH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 EINEVLSWKLVPDNYPPGDQPPPPSYIYGAQHLLRLFVKLPEILGKMSFSEKNLKALLKH
420 430 440 450 460 470
490 500 510 520
pF1KB5 FDLFLRFLAEYHDDFFPESAYVAACEAHYSTKNPRAIY
::::::::::::::::::::::::::::::::::::::
CCDS55 FDLFLRFLAEYHDDFFPESAYVAACEAHYSTKNPRAIY
480 490 500
>>CCDS14148.1 MSL3 gene_id:10943|Hs108|chrX (416 aa)
initn: 2586 init1: 2586 opt: 2586 Z-score: 1989.2 bits: 377.4 E(32554): 1.8e-104
Smith-Waterman score: 2586; 100.0% identity (100.0% similar) in 390 aa overlap (1-390:1-390)
10 20 30 40 50 60
pF1KB5 MSASEGMKFKFHSGEKVLCFEPDPTKARVLYDAKIVDVIVGKDEKGRKIPEYLIHFNGWN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 MSASEGMKFKFHSGEKVLCFEPDPTKARVLYDAKIVDVIVGKDEKGRKIPEYLIHFNGWN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 RSWDRWAAEDHVLRDTDENRRLQRKLARKAVARLRSTGRKKKRCRLPGVDSVLKGLPTEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 RSWDRWAAEDHVLRDTDENRRLQRKLARKAVARLRSTGRKKKRCRLPGVDSVLKGLPTEE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 KDENDENSLSSSSDCSENKDEEISEESDIEEKTEVKEEPELQTRREMEERTITIEIPEVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 KDENDENSLSSSSDCSENKDEEISEESDIEEKTEVKEEPELQTRREMEERTITIEIPEVL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 KKQLEDDCYYINRRKRLVKLPCQTNIITILESYVKHFAINAAFSANERPRHHHVMPHANM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 KKQLEDDCYYINRRKRLVKLPCQTNIITILESYVKHFAINAAFSANERPRHHHVMPHANM
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 NVHYIPAEKNVDLCKEMVDGLRITFDYTLPLVLLYPYEQAQYKKVTSSKFFLPIKESATS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 NVHYIPAEKNVDLCKEMVDGLRITFDYTLPLVLLYPYEQAQYKKVTSSKFFLPIKESATS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 TNRSQEELSPSPPLLNPSTPQSTESQPTTGEPATPKRRKAEPEALQSLRRSTRHSANCDR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 TNRSQEELSPSPPLLNPSTPQSTESQPTTGEPATPKRRKAEPEALQSLRRSTRHSANCDR
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB5 LSESSASPQPKRRQQDTSASMPKLFLHLEKKTPVHSRSSSPIPLTPSKEGSAVFAGFEGR
::::::::::::::::::::::::::::::
CCDS14 LSESSASPQPKRRQQDTSASMPKLFLHLEKSRFILGCPRPGRASVYFVFSQCQAWC
370 380 390 400 410
>>CCDS65213.1 MSL3 gene_id:10943|Hs108|chrX (372 aa)
initn: 2447 init1: 2447 opt: 2447 Z-score: 1883.8 bits: 357.7 E(32554): 1.3e-98
Smith-Waterman score: 2447; 99.5% identity (100.0% similar) in 368 aa overlap (154-521:5-372)
130 140 150 160 170 180
pF1KB5 NDENSLSSSSDCSENKDEEISEESDIEEKTEVKEEPELQTRREMEERTITIEIPEVLKKQ
..::::::::::::::::::::::::::::
CCDS65 MKMMKTKEEPELQTRREMEERTITIEIPEVLKKQ
10 20 30
190 200 210 220 230 240
pF1KB5 LEDDCYYINRRKRLVKLPCQTNIITILESYVKHFAINAAFSANERPRHHHVMPHANMNVH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS65 LEDDCYYINRRKRLVKLPCQTNIITILESYVKHFAINAAFSANERPRHHHVMPHANMNVH
40 50 60 70 80 90
250 260 270 280 290 300
pF1KB5 YIPAEKNVDLCKEMVDGLRITFDYTLPLVLLYPYEQAQYKKVTSSKFFLPIKESATSTNR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS65 YIPAEKNVDLCKEMVDGLRITFDYTLPLVLLYPYEQAQYKKVTSSKFFLPIKESATSTNR
100 110 120 130 140 150
310 320 330 340 350 360
pF1KB5 SQEELSPSPPLLNPSTPQSTESQPTTGEPATPKRRKAEPEALQSLRRSTRHSANCDRLSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS65 SQEELSPSPPLLNPSTPQSTESQPTTGEPATPKRRKAEPEALQSLRRSTRHSANCDRLSE
160 170 180 190 200 210
370 380 390 400 410 420
pF1KB5 SSASPQPKRRQQDTSASMPKLFLHLEKKTPVHSRSSSPIPLTPSKEGSAVFAGFEGRRTN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS65 SSASPQPKRRQQDTSASMPKLFLHLEKKTPVHSRSSSPIPLTPSKEGSAVFAGFEGRRTN
220 230 240 250 260 270
430 440 450 460 470 480
pF1KB5 EINEVLSWKLVPDNYPPGDQPPPPSYIYGAQHLLRLFVKLPEILGKMSFSEKNLKALLKH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS65 EINEVLSWKLVPDNYPPGDQPPPPSYIYGAQHLLRLFVKLPEILGKMSFSEKNLKALLKH
280 290 300 310 320 330
490 500 510 520
pF1KB5 FDLFLRFLAEYHDDFFPESAYVAACEAHYSTKNPRAIY
::::::::::::::::::::::::::::::::::::::
CCDS65 FDLFLRFLAEYHDDFFPESAYVAACEAHYSTKNPRAIY
340 350 360 370
>>CCDS14149.1 MSL3 gene_id:10943|Hs108|chrX (355 aa)
initn: 2375 init1: 2375 opt: 2375 Z-score: 1829.1 bits: 347.5 E(32554): 1.5e-95
Smith-Waterman score: 2375; 100.0% identity (100.0% similar) in 355 aa overlap (167-521:1-355)
140 150 160 170 180 190
pF1KB5 ENKDEEISEESDIEEKTEVKEEPELQTRREMEERTITIEIPEVLKKQLEDDCYYINRRKR
::::::::::::::::::::::::::::::
CCDS14 MEERTITIEIPEVLKKQLEDDCYYINRRKR
10 20 30
200 210 220 230 240 250
pF1KB5 LVKLPCQTNIITILESYVKHFAINAAFSANERPRHHHVMPHANMNVHYIPAEKNVDLCKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 LVKLPCQTNIITILESYVKHFAINAAFSANERPRHHHVMPHANMNVHYIPAEKNVDLCKE
40 50 60 70 80 90
260 270 280 290 300 310
pF1KB5 MVDGLRITFDYTLPLVLLYPYEQAQYKKVTSSKFFLPIKESATSTNRSQEELSPSPPLLN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 MVDGLRITFDYTLPLVLLYPYEQAQYKKVTSSKFFLPIKESATSTNRSQEELSPSPPLLN
100 110 120 130 140 150
320 330 340 350 360 370
pF1KB5 PSTPQSTESQPTTGEPATPKRRKAEPEALQSLRRSTRHSANCDRLSESSASPQPKRRQQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 PSTPQSTESQPTTGEPATPKRRKAEPEALQSLRRSTRHSANCDRLSESSASPQPKRRQQD
160 170 180 190 200 210
380 390 400 410 420 430
pF1KB5 TSASMPKLFLHLEKKTPVHSRSSSPIPLTPSKEGSAVFAGFEGRRTNEINEVLSWKLVPD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 TSASMPKLFLHLEKKTPVHSRSSSPIPLTPSKEGSAVFAGFEGRRTNEINEVLSWKLVPD
220 230 240 250 260 270
440 450 460 470 480 490
pF1KB5 NYPPGDQPPPPSYIYGAQHLLRLFVKLPEILGKMSFSEKNLKALLKHFDLFLRFLAEYHD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 NYPPGDQPPPPSYIYGAQHLLRLFVKLPEILGKMSFSEKNLKALLKHFDLFLRFLAEYHD
280 290 300 310 320 330
500 510 520
pF1KB5 DFFPESAYVAACEAHYSTKNPRAIY
:::::::::::::::::::::::::
CCDS14 DFFPESAYVAACEAHYSTKNPRAIY
340 350
521 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 21:42:42 2016 done: Fri Nov 4 21:42:43 2016
Total Scan time: 3.910 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]