FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB5819, 412 aa
  1>>>pF1KB5819 412 - 412 aa - 412 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 12.5742+/-0.00125; mu= -15.8507+/- 0.073
 mean_var=599.1432+/-157.134, 0's: 0 Z-trim(112.3): 6  B-trim: 708 in 1/51
 Lambda= 0.052397
 statistics sampled from 13112 (13118) to 13112 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.739), E-opt: 0.2 (0.403), width:  16
 Scan time:  3.340

The best scores are:                                      opt bits E(32554)
CCDS56006.1 ZNF821 gene_id:55565|Hs108|chr16       ( 412) 2733 221.6 1.1e-57
CCDS32481.1 ZNF821 gene_id:55565|Hs108|chr16       ( 370) 2355 193.0 4.1e-49
CCDS73911.1 ZNF821 gene_id:55565|Hs108|chr16       ( 139)  937 85.3 3.9e-17


>>CCDS56006.1 ZNF821 gene_id:55565|Hs108|chr16            (412 aa)
 initn: 2733 init1: 2733 opt: 2733  Z-score: 1149.2  bits: 221.6 E(32554): 1.1e-57
Smith-Waterman score: 2733; 100.0% identity (100.0% similar) in 412 aa overlap (1-412:1-412)

               10        20        30        40        50        60
pF1KB5 MSRRKQTNPNKVHWDQVFAGLEEQARQAMMKTDFPGDLGSQRQAIQQLRDQDSSSSDSEG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 MSRRKQTNPNKVHWDQVFAGLEEQARQAMMKTDFPGDLGSQRQAIQQLRDQDSSSSDSEG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 DEEETTQDEVSSHTSEEDGGVVKVEKELENTEQPVGGNEVVEHEVTGNLNSDPLLELCQC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 DEEETTQDEVSSHTSEEDGGVVKVEKELENTEQPVGGNEVVEHEVTGNLNSDPLLELCQC
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB5 PLCQLDCGSREQLIAHVYQHTAAVVSAKSYMCPVCGRALSSPGSLGRHLLIHSEDQRSNC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 PLCQLDCGSREQLIAHVYQHTAAVVSAKSYMCPVCGRALSSPGSLGRHLLIHSEDQRSNC
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB5 AVCGARFTSHATFNSEKLPEVLNMESLPTVHNEGPSSAEGKDIAFSPPVYPAGILLVCNN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 AVCGARFTSHATFNSEKLPEVLNMESLPTVHNEGPSSAEGKDIAFSPPVYPAGILLVCNN
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB5 CAAYRKLLEAQTPSVRKWALRRQNEPLEVRLQRLERERTAKKSRRDNETPEEREVRRMRD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 CAAYRKLLEAQTPSVRKWALRRQNEPLEVRLQRLERERTAKKSRRDNETPEEREVRRMRD
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB5 REAKRLQRMQETDEQRARRLQRDREAMRLKRANETPEKRQARLIREREAKRLKRRLEKMD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 REAKRLQRMQETDEQRARRLQRDREAMRLKRANETPEKRQARLIREREAKRLKRRLEKMD
              310       320       330       340       350       360

              370       380       390       400       410  
pF1KB5 MMLRAQFGQDPSAMAALAAEMNFFQLPVSGVELDSQLLGKMAFEEQNSSSLH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 MMLRAQFGQDPSAMAALAAEMNFFQLPVSGVELDSQLLGKMAFEEQNSSSLH
              370       380       390       400       410  

>>CCDS32481.1 ZNF821 gene_id:55565|Hs108|chr16            (370 aa)
 initn: 2355 init1: 2355 opt: 2355  Z-score: 995.3  bits: 193.0 E(32554): 4.1e-49
Smith-Waterman score: 2355; 100.0% identity (100.0% similar) in 356 aa overlap (57-412:15-370)

         30        40        50        60        70        80      
pF1KB5 QAMMKTDFPGDLGSQRQAIQQLRDQDSSSSDSEGDEEETTQDEVSSHTSEEDGGVVKVEK
                                     ::::::::::::::::::::::::::::::
CCDS32                 MSRRKQTNPNKVHCDSEGDEEETTQDEVSSHTSEEDGGVVKVEK
                               10        20        30        40    

         90       100       110       120       130       140      
pF1KB5 ELENTEQPVGGNEVVEHEVTGNLNSDPLLELCQCPLCQLDCGSREQLIAHVYQHTAAVVS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 ELENTEQPVGGNEVVEHEVTGNLNSDPLLELCQCPLCQLDCGSREQLIAHVYQHTAAVVS
           50        60        70        80        90       100    

        150       160       170       180       190       200      
pF1KB5 AKSYMCPVCGRALSSPGSLGRHLLIHSEDQRSNCAVCGARFTSHATFNSEKLPEVLNMES
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 AKSYMCPVCGRALSSPGSLGRHLLIHSEDQRSNCAVCGARFTSHATFNSEKLPEVLNMES
          110       120       130       140       150       160    

        210       220       230       240       250       260      
pF1KB5 LPTVHNEGPSSAEGKDIAFSPPVYPAGILLVCNNCAAYRKLLEAQTPSVRKWALRRQNEP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 LPTVHNEGPSSAEGKDIAFSPPVYPAGILLVCNNCAAYRKLLEAQTPSVRKWALRRQNEP
          170       180       190       200       210       220    

        270       280       290       300       310       320      
pF1KB5 LEVRLQRLERERTAKKSRRDNETPEEREVRRMRDREAKRLQRMQETDEQRARRLQRDREA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 LEVRLQRLERERTAKKSRRDNETPEEREVRRMRDREAKRLQRMQETDEQRARRLQRDREA
          230       240       250       260       270       280    

        330       340       350       360       370       380      
pF1KB5 MRLKRANETPEKRQARLIREREAKRLKRRLEKMDMMLRAQFGQDPSAMAALAAEMNFFQL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 MRLKRANETPEKRQARLIREREAKRLKRRLEKMDMMLRAQFGQDPSAMAALAAEMNFFQL
          290       300       310       320       330       340    

        390       400       410  
pF1KB5 PVSGVELDSQLLGKMAFEEQNSSSLH
       ::::::::::::::::::::::::::
CCDS32 PVSGVELDSQLLGKMAFEEQNSSSLH
          350       360       370

>>CCDS73911.1 ZNF821 gene_id:55565|Hs108|chr16            (139 aa)
 initn: 937 init1: 937 opt: 937  Z-score: 421.0  bits: 85.3 E(32554): 3.9e-17
Smith-Waterman score: 937; 100.0% identity (100.0% similar) in 139 aa overlap (1-139:1-139)

               10        20        30        40        50        60
pF1KB5 MSRRKQTNPNKVHWDQVFAGLEEQARQAMMKTDFPGDLGSQRQAIQQLRDQDSSSSDSEG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 MSRRKQTNPNKVHWDQVFAGLEEQARQAMMKTDFPGDLGSQRQAIQQLRDQDSSSSDSEG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 DEEETTQDEVSSHTSEEDGGVVKVEKELENTEQPVGGNEVVEHEVTGNLNSDPLLELCQC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 DEEETTQDEVSSHTSEEDGGVVKVEKELENTEQPVGGNEVVEHEVTGNLNSDPLLELCQC
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB5 PLCQLDCGSREQLIAHVYQHTAAVVSAKSYMCPVCGRALSSPGSLGRHLLIHSEDQRSNC
       :::::::::::::::::::                                         
CCDS73 PLCQLDCGSREQLIAHVYQ                                         
              130                                                  




412 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sat Nov  5 15:00:37 2016 done: Sat Nov  5 15:00:37 2016
 Total Scan time:  3.340 Total Display time: -0.010

Function used was FASTA [36.3.4 Apr, 2011]