Result of FASTA (omim) for
pF1KB5801
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB5801, 371 aa
1>>>pF1KB5801 371 - 371 aa - 371 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.9931+/-0.000335; mu= 9.9293+/- 0.021
mean_var=134.9618+/-26.148, 0's: 0 Z-trim(119.3): 8 B-trim: 0 in 0/56
Lambda= 0.110400
statistics sampled from 33207 (33214) to 33207 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.748), E-opt: 0.2 (0.389), width: 16
Scan time: 6.930
The best scores are: opt bits E(85289)
NP_665809 (OMIM: 609937,616910) cell division cycl ( 371) 2548 416.9 3.7e-116
XP_011510259 (OMIM: 609937,616910) PREDICTED: cell ( 423) 2246 368.9 1.2e-101
NP_114148 (OMIM: 609937,616910) cell division cycl ( 450) 2246 368.9 1.3e-101
NP_001120843 (OMIM: 609685) cell division cycle-as ( 408) 739 128.8 2.1e-29
NP_001120842 (OMIM: 609685) cell division cycle-as ( 420) 739 128.8 2.2e-29
NP_061189 (OMIM: 609685) cell division cycle-assoc ( 454) 739 128.9 2.3e-29
>>NP_665809 (OMIM: 609937,616910) cell division cycle-as (371 aa)
initn: 2548 init1: 2548 opt: 2548 Z-score: 2206.5 bits: 416.9 E(85289): 3.7e-116
Smith-Waterman score: 2548; 100.0% identity (100.0% similar) in 371 aa overlap (1-371:1-371)
10 20 30 40 50 60
pF1KB5 MDARRVPQKDLRVKKNLKKFRYVKLISMETSSSSDDSCDSFASDNFANTRLQSVREGCRT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_665 MDARRVPQKDLRVKKNLKKFRYVKLISMETSSSSDDSCDSFASDNFANTRLQSVREGCRT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 RSQCRHSGPLRVAMKFPARSTRGATNKKAESRQPSENSVTDSNSDSEDESGMNFLEKRAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_665 RSQCRHSGPLRVAMKFPARSTRGATNKKAESRQPSENSVTDSNSDSEDESGMNFLEKRAL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 NIKQNKAMLAKLMSELESFPGSFRGRHPLPGSDSQSRRPRRRTFPGVASRRNPERRARPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_665 NIKQNKAMLAKLMSELESFPGSFRGRHPLPGSDSQSRRPRRRTFPGVASRRNPERRARPL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 TRSRSRILGSLDALPMEEEEEEDKYMLVRKRKTVDGYMNEDDLPRSRRSRSSVTLPHIIR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_665 TRSRSRILGSLDALPMEEEEEEDKYMLVRKRKTVDGYMNEDDLPRSRRSRSSVTLPHIIR
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 PVEEITEEELENVCSNSREKIYNRSLGSTCHQCRQKTIDTKTNCRNPDCWGVRGQFCGPC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_665 PVEEITEEELENVCSNSREKIYNRSLGSTCHQCRQKTIDTKTNCRNPDCWGVRGQFCGPC
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 LRNRYGEEVRDALLDPNWHCPPCRGICNCSFCRQRDGRCATGVLVYLAKYHGFGNVHAYL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_665 LRNRYGEEVRDALLDPNWHCPPCRGICNCSFCRQRDGRCATGVLVYLAKYHGFGNVHAYL
310 320 330 340 350 360
370
pF1KB5 KSLKQEFEMQA
:::::::::::
NP_665 KSLKQEFEMQA
370
>>XP_011510259 (OMIM: 609937,616910) PREDICTED: cell div (423 aa)
initn: 2233 init1: 2233 opt: 2246 Z-score: 1945.7 bits: 368.9 E(85289): 1.2e-101
Smith-Waterman score: 2246; 93.7% identity (97.4% similar) in 349 aa overlap (24-371:75-423)
10 20 30 40 50
pF1KB5 MDARRVPQKDLRVKKNLKKFRYVKLISMETSSSSDDSCDSFASDNFAN-TRLQ
.: .. ..:.:.: .:. ... . :::
XP_011 ESFCGFSESEVQDVLDHCGFLQKPRPDVTNELAGIFHADSDDESFCGFSESEIQDGMRLQ
50 60 70 80 90 100
60 70 80 90 100 110
pF1KB5 SVREGCRTRSQCRHSGPLRVAMKFPARSTRGATNKKAESRQPSENSVTDSNSDSEDESGM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SVREGCRTRSQCRHSGPLRVAMKFPARSTRGATNKKAESRQPSENSVTDSNSDSEDESGM
110 120 130 140 150 160
120 130 140 150 160 170
pF1KB5 NFLEKRALNIKQNKAMLAKLMSELESFPGSFRGRHPLPGSDSQSRRPRRRTFPGVASRRN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NFLEKRALNIKQNKAMLAKLMSELESFPGSFRGRHPLPGSDSQSRRPRRRTFPGVASRRN
170 180 190 200 210 220
180 190 200 210 220 230
pF1KB5 PERRARPLTRSRSRILGSLDALPMEEEEEEDKYMLVRKRKTVDGYMNEDDLPRSRRSRSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PERRARPLTRSRSRILGSLDALPMEEEEEEDKYMLVRKRKTVDGYMNEDDLPRSRRSRSS
230 240 250 260 270 280
240 250 260 270 280 290
pF1KB5 VTLPHIIRPVEEITEEELENVCSNSREKIYNRSLGSTCHQCRQKTIDTKTNCRNPDCWGV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VTLPHIIRPVEEITEEELENVCSNSREKIYNRSLGSTCHQCRQKTIDTKTNCRNPDCWGV
290 300 310 320 330 340
300 310 320 330 340 350
pF1KB5 RGQFCGPCLRNRYGEEVRDALLDPNWHCPPCRGICNCSFCRQRDGRCATGVLVYLAKYHG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RGQFCGPCLRNRYGEEVRDALLDPNWHCPPCRGICNCSFCRQRDGRCATGVLVYLAKYHG
350 360 370 380 390 400
360 370
pF1KB5 FGNVHAYLKSLKQEFEMQA
:::::::::::::::::::
XP_011 FGNVHAYLKSLKQEFEMQA
410 420
>>NP_114148 (OMIM: 609937,616910) cell division cycle-as (450 aa)
initn: 2233 init1: 2233 opt: 2246 Z-score: 1945.4 bits: 368.9 E(85289): 1.3e-101
Smith-Waterman score: 2246; 93.7% identity (97.4% similar) in 349 aa overlap (24-371:102-450)
10 20 30 40 50
pF1KB5 MDARRVPQKDLRVKKNLKKFRYVKLISMETSSSSDDSCDSFASDNFAN-TRLQ
.: .. ..:.:.: .:. ... . :::
NP_114 ESFCGFSESEVQDVLDHCGFLQKPRPDVTNELAGIFHADSDDESFCGFSESEIQDGMRLQ
80 90 100 110 120 130
60 70 80 90 100 110
pF1KB5 SVREGCRTRSQCRHSGPLRVAMKFPARSTRGATNKKAESRQPSENSVTDSNSDSEDESGM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_114 SVREGCRTRSQCRHSGPLRVAMKFPARSTRGATNKKAESRQPSENSVTDSNSDSEDESGM
140 150 160 170 180 190
120 130 140 150 160 170
pF1KB5 NFLEKRALNIKQNKAMLAKLMSELESFPGSFRGRHPLPGSDSQSRRPRRRTFPGVASRRN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_114 NFLEKRALNIKQNKAMLAKLMSELESFPGSFRGRHPLPGSDSQSRRPRRRTFPGVASRRN
200 210 220 230 240 250
180 190 200 210 220 230
pF1KB5 PERRARPLTRSRSRILGSLDALPMEEEEEEDKYMLVRKRKTVDGYMNEDDLPRSRRSRSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_114 PERRARPLTRSRSRILGSLDALPMEEEEEEDKYMLVRKRKTVDGYMNEDDLPRSRRSRSS
260 270 280 290 300 310
240 250 260 270 280 290
pF1KB5 VTLPHIIRPVEEITEEELENVCSNSREKIYNRSLGSTCHQCRQKTIDTKTNCRNPDCWGV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_114 VTLPHIIRPVEEITEEELENVCSNSREKIYNRSLGSTCHQCRQKTIDTKTNCRNPDCWGV
320 330 340 350 360 370
300 310 320 330 340 350
pF1KB5 RGQFCGPCLRNRYGEEVRDALLDPNWHCPPCRGICNCSFCRQRDGRCATGVLVYLAKYHG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_114 RGQFCGPCLRNRYGEEVRDALLDPNWHCPPCRGICNCSFCRQRDGRCATGVLVYLAKYHG
380 390 400 410 420 430
360 370
pF1KB5 FGNVHAYLKSLKQEFEMQA
:::::::::::::::::::
NP_114 FGNVHAYLKSLKQEFEMQA
440 450
>--
initn: 356 init1: 318 opt: 318 Z-score: 285.8 bits: 61.8 E(85289): 3.5e-09
Smith-Waterman score: 318; 98.0% identity (100.0% similar) in 50 aa overlap (1-50:1-50)
10 20 30 40 50 60
pF1KB5 MDARRVPQKDLRVKKNLKKFRYVKLISMETSSSSDDSCDSFASDNFANTRLQSVREGCRT
:::::::::::::::::::::::::::::::::::::::::::::::::.
NP_114 MDARRVPQKDLRVKKNLKKFRYVKLISMETSSSSDDSCDSFASDNFANTKPKFRSDISEE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 RSQCRHSGPLRVAMKFPARSTRGATNKKAESRQPSENSVTDSNSDSEDESGMNFLEKRAL
NP_114 LANVFYEDSDNESFCGFSESEVQDVLDHCGFLQKPRPDVTNELAGIFHADSDDESFCGFS
70 80 90 100 110 120
>>NP_001120843 (OMIM: 609685) cell division cycle-associ (408 aa)
initn: 937 init1: 728 opt: 739 Z-score: 648.7 bits: 128.8 E(85289): 2.1e-29
Smith-Waterman score: 960; 43.5% identity (66.8% similar) in 391 aa overlap (6-367:33-404)
10 20 30
pF1KB5 MDARRVPQKDLRVKKNLKKFRYVKLISMETSSS-S
::.. : ... .: .. .. . :. :
NP_001 LATRYQIPKEVADIFNAPSDDEEFVGFRDDVPMETLSSEESCDSFDSLESGKQVVESDLS
10 20 30 40 50 60
40 50 60 70 80 90
pF1KB5 DDSCDSFASDNFANTRLQSVREGCRTRSQCRHSGPLRVAMKFPARSTRGATNKKAESRQ-
::. :..:.. . . ... :.::. : : ::::..::... . .:.. :.:
NP_001 DDGKASLVSEEEEDEEEDKATPR-RSRSR-RSSIGLRVAFQFPTKKLANKPDKNSSSEQL
70 80 90 100 110 120
100 110 120
pF1KB5 ------------------------PSENSVTDSNSDSEDES--GMNFLEKRALNIKQNKA
:.:...:..::.::: . . : ::..:::.:::
NP_001 FSSARLQNEKKTILERKKDCRQVIQREDSTSESEDDSRDESQESSDALLKRTMNIKENKA
130 140 150 160 170 180
130 140 150 160 170 180
pF1KB5 MLAKLMSELESFPGSFRGRHPLPGSDSQSRRPRRRTFPGVASRR-NPERRARPLTRSRSR
:::.:..::.:.: : : : : :... :: : .:: :: : ::: .
NP_001 MLAQLLAELNSMPDFFPVR--TPTSASRKKTVRRAFSEGQITRRMNPTRSARPPEKF---
190 200 210 220 230
190 200 210 220 230 240
pF1KB5 ILGSLDALPMEEEEEEDKYMLVRKRKTVDGYMNEDDLPRSRRSRSSVTLPHIIRPVEEIT
.:. . . . .... :.:::. : : :: : : .::::.::
NP_001 ---ALENFTVSAAKFAEEFYSFRRRKTIGGKCRE----YRRRHRISS-----FRPVEDIT
240 250 260 270 280
250 260 270 280 290 300
pF1KB5 EEELENVCSNSREKIYNRSLGSTCHQCRQKTIDTKTNCRNPDCWGVRGQFCGPCLRNRYG
::.:::: . :.:::.. ::.:::::::::::::: ::: : ::::::::::::::::
NP_001 EEDLENVAITVRDKIYDKVLGNTCHQCRQKTIDTKTVCRNQGCCGVRGQFCGPCLRNRYG
290 300 310 320 330 340
310 320 330 340 350 360
pF1KB5 EEVRDALLDPNWHCPPCRGICNCSFCRQRDGRCATGVLVYLAKYHGFGNVHAYLKSLKQE
:.::.:::::.: :::::::::::.::.::::::::.:..:::..:. ::. ::.::..:
NP_001 EDVRSALLDPDWVCPPCRGICNCSYCRKRDGRCATGILIHLAKFYGYDNVKEYLESLQKE
350 360 370 380 390 400
370
pF1KB5 FEMQA
.
NP_001 LVEDN
>>NP_001120842 (OMIM: 609685) cell division cycle-associ (420 aa)
initn: 937 init1: 728 opt: 739 Z-score: 648.6 bits: 128.8 E(85289): 2.2e-29
Smith-Waterman score: 957; 45.5% identity (67.4% similar) in 365 aa overlap (31-367:71-416)
10 20 30 40 50 60
pF1KB5 MDARRVPQKDLRVKKNLKKFRYVKLISMETSSSSDDSCDSFASDNFANTRLQSVREGCRT
:. :::. :..:.. . . ... :.
NP_001 EDTDSETEDFAGFTQSDLNGKTNPEVMVVESDLSDDGKASLVSEEEEDEEEDKATPR-RS
50 60 70 80 90
70 80 90
pF1KB5 RSQCRHSGPLRVAMKFPARSTRGATNKKAESRQ-------------------------PS
::. : : ::::..::... . .:.. :.:
NP_001 RSR-RSSIGLRVAFQFPTKKLANKPDKNSSSEQLFSSARLQNEKKTILERKKDCRQVIQR
100 110 120 130 140 150
100 110 120 130 140 150
pF1KB5 ENSVTDSNSDSEDES--GMNFLEKRALNIKQNKAMLAKLMSELESFPGSFRGRHPLPGSD
:.:...:..::.::: . . : ::..:::.::::::.:..::.:.: : : : :
NP_001 EDSTSESEDDSRDESQESSDALLKRTMNIKENKAMLAQLLAELNSMPDFFPVR--TPTSA
160 170 180 190 200 210
160 170 180 190 200 210
pF1KB5 SQSRRPRRRTFPGVASRR-NPERRARPLTRSRSRILGSLDALPMEEEEEEDKYMLVRKRK
:... :: : .:: :: : ::: . .:. . . . .... :.::
NP_001 SRKKTVRRAFSEGQITRRMNPTRSARPPEKF------ALENFTVSAAKFAEEFYSFRRRK
220 230 240 250 260 270
220 230 240 250 260 270
pF1KB5 TVDGYMNEDDLPRSRRSRSSVTLPHIIRPVEEITEEELENVCSNSREKIYNRSLGSTCHQ
:. : : :: : : .::::.::::.:::: . :.:::.. ::.::::
NP_001 TIGGKCRE----YRRRHRISS-----FRPVEDITEEDLENVAITVRDKIYDKVLGNTCHQ
280 290 300 310 320
280 290 300 310 320 330
pF1KB5 CRQKTIDTKTNCRNPDCWGVRGQFCGPCLRNRYGEEVRDALLDPNWHCPPCRGICNCSFC
:::::::::: ::: : :::::::::::::::::.::.:::::.: :::::::::::.:
NP_001 CRQKTIDTKTVCRNQGCCGVRGQFCGPCLRNRYGEDVRSALLDPDWVCPPCRGICNCSYC
330 340 350 360 370 380
340 350 360 370
pF1KB5 RQRDGRCATGVLVYLAKYHGFGNVHAYLKSLKQEFEMQA
:.::::::::.:..:::..:. ::. ::.::..:.
NP_001 RKRDGRCATGILIHLAKFYGYDNVKEYLESLQKELVEDN
390 400 410 420
>>NP_061189 (OMIM: 609685) cell division cycle-associate (454 aa)
initn: 937 init1: 728 opt: 739 Z-score: 648.1 bits: 128.9 E(85289): 2.3e-29
Smith-Waterman score: 957; 45.5% identity (67.4% similar) in 365 aa overlap (31-367:105-450)
10 20 30 40 50 60
pF1KB5 MDARRVPQKDLRVKKNLKKFRYVKLISMETSSSSDDSCDSFASDNFANTRLQSVREGCRT
:. :::. :..:.. . . ... :.
NP_061 EDTDSETEDFAGFTQSDLNGKTNPEVMVVESDLSDDGKASLVSEEEEDEEEDKATPR-RS
80 90 100 110 120 130
70 80 90
pF1KB5 RSQCRHSGPLRVAMKFPARSTRGATNKKAESRQ-------------------------PS
::. : : ::::..::... . .:.. :.:
NP_061 RSR-RSSIGLRVAFQFPTKKLANKPDKNSSSEQLFSSARLQNEKKTILERKKDCRQVIQR
140 150 160 170 180 190
100 110 120 130 140 150
pF1KB5 ENSVTDSNSDSEDES--GMNFLEKRALNIKQNKAMLAKLMSELESFPGSFRGRHPLPGSD
:.:...:..::.::: . . : ::..:::.::::::.:..::.:.: : : : :
NP_061 EDSTSESEDDSRDESQESSDALLKRTMNIKENKAMLAQLLAELNSMPDFFPVR--TPTSA
200 210 220 230 240 250
160 170 180 190 200 210
pF1KB5 SQSRRPRRRTFPGVASRR-NPERRARPLTRSRSRILGSLDALPMEEEEEEDKYMLVRKRK
:... :: : .:: :: : ::: . .:. . . . .... :.::
NP_061 SRKKTVRRAFSEGQITRRMNPTRSARPPEKF------ALENFTVSAAKFAEEFYSFRRRK
260 270 280 290 300
220 230 240 250 260 270
pF1KB5 TVDGYMNEDDLPRSRRSRSSVTLPHIIRPVEEITEEELENVCSNSREKIYNRSLGSTCHQ
:. : : :: : : .::::.::::.:::: . :.:::.. ::.::::
NP_061 TIGGKCRE----YRRRHRISS-----FRPVEDITEEDLENVAITVRDKIYDKVLGNTCHQ
310 320 330 340 350
280 290 300 310 320 330
pF1KB5 CRQKTIDTKTNCRNPDCWGVRGQFCGPCLRNRYGEEVRDALLDPNWHCPPCRGICNCSFC
:::::::::: ::: : :::::::::::::::::.::.:::::.: :::::::::::.:
NP_061 CRQKTIDTKTVCRNQGCCGVRGQFCGPCLRNRYGEDVRSALLDPDWVCPPCRGICNCSYC
360 370 380 390 400 410
340 350 360 370
pF1KB5 RQRDGRCATGVLVYLAKYHGFGNVHAYLKSLKQEFEMQA
:.::::::::.:..:::..:. ::. ::.::..:.
NP_061 RKRDGRCATGILIHLAKFYGYDNVKEYLESLQKELVEDN
420 430 440 450
371 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 14:55:38 2016 done: Sat Nov 5 14:55:39 2016
Total Scan time: 6.930 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]