Result of FASTA (ccds) for
pF1KB5766
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB5766, 747 aa
1>>>pF1KB5766 747 - 747 aa - 747 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 8.6583+/-0.0011; mu= 5.8277+/- 0.065
mean_var=232.9765+/-47.533, 0's: 0 Z-trim(109.5): 47 B-trim: 85 in 2/51
Lambda= 0.084027
statistics sampled from 10888 (10903) to 10888 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.679), E-opt: 0.2 (0.335), width: 16
Scan time: 4.480
The best scores are: opt bits E(32554)
CCDS46357.1 IMMT gene_id:10989|Hs108|chr2 ( 747) 4728 587.0 3.6e-167
CCDS46355.1 IMMT gene_id:10989|Hs108|chr2 ( 758) 3819 476.8 5.4e-134
CCDS46356.1 IMMT gene_id:10989|Hs108|chr2 ( 757) 3801 474.6 2.4e-133
>>CCDS46357.1 IMMT gene_id:10989|Hs108|chr2 (747 aa)
initn: 4728 init1: 4728 opt: 4728 Z-score: 3114.8 bits: 587.0 E(32554): 3.6e-167
Smith-Waterman score: 4728; 100.0% identity (100.0% similar) in 747 aa overlap (1-747:1-747)
10 20 30 40 50 60
pF1KB5 MLRACQLSGVTAAAQSCLCGKFVLRPLRPCRRYSTSGSSGLTTGKIAGAGLLFVGGGIGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 MLRACQLSGVTAAAQSCLCGKFVLRPLRPCRRYSTSGSSGLTTGKIAGAGLLFVGGGIGG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 TILYAKWDSHFRESVEKTIPYSDKLFEMVLGPAAYNVPLPKKSIQSGPLKISSVSEVMKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 TILYAKWDSHFRESVEKTIPYSDKLFEMVLGPAAYNVPLPKKSIQSGPLKISSVSEVMKE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 SKQPASQLQKQKGDTPASATAGDTLSVPAPAVQPEESLKTDHPEIGEGKPTPALSEEASS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 SKQPASQLQKQKGDTPASATAGDTLSVPAPAVQPEESLKTDHPEIGEGKPTPALSEEASS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 SSIRERPPEEVAARLAQQEKQEQVKIESLAKSLEDALRQTASVTLQAIAAQNAAVQAVNA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 SSIRERPPEEVAARLAQQEKQEQVKIESLAKSLEDALRQTASVTLQAIAAQNAAVQAVNA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 HSNILKAAMDNSEIAGEKKSAQWRTVEGALKERRKAVDEAADALLKAKEELEKMKSVIEN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 HSNILKAAMDNSEIAGEKKSAQWRTVEGALKERRKAVDEAADALLKAKEELEKMKSVIEN
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 AKKKEVAGAKPHITAAEGKLHNMIVDLDNVVKKVQAAQSEAKVVSQYHELVVQARDDFKR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 AKKKEVAGAKPHITAAEGKLHNMIVDLDNVVKKVQAAQSEAKVVSQYHELVVQARDDFKR
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB5 ELDSITPEVLPGWKGMSVSDLADKLSTDDLNSLIAHAHRRIDQLNRELAEQKATEKQHIT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 ELDSITPEVLPGWKGMSVSDLADKLSTDDLNSLIAHAHRRIDQLNRELAEQKATEKQHIT
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB5 LALEKQKLEEKRAFDSAVAKALEHHRSEIQAEQDRKIEEVRDAMENEMRTQLRRQAAAHT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 LALEKQKLEEKRAFDSAVAKALEHHRSEIQAEQDRKIEEVRDAMENEMRTQLRRQAAAHT
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB5 DHLRDVLRVQEQELKSEFEQNLSEKLSEQELQFRRLSQEQVDNFTLDINTAYARLRGIEQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 DHLRDVLRVQEQELKSEFEQNLSEKLSEQELQFRRLSQEQVDNFTLDINTAYARLRGIEQ
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB5 AVQSHAVAEEEARKAHQLWLSVEALKYSMKTSSAETPTIPLGSAVEAIKANCSDNEFTQA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 AVQSHAVAEEEARKAHQLWLSVEALKYSMKTSSAETPTIPLGSAVEAIKANCSDNEFTQA
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB5 LTAAIPPESLTRGVYSEETLRARFYAVQKLARRVAMIDETRNSLYQYFLSYLQSLLLFPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 LTAAIPPESLTRGVYSEETLRARFYAVQKLARRVAMIDETRNSLYQYFLSYLQSLLLFPP
610 620 630 640 650 660
670 680 690 700 710 720
pF1KB5 QQLKPPPELCPEDINTFKLLSYASYCIEHGDLELAAKFVNQLKGESRRVAQDWLKEARMT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 QQLKPPPELCPEDINTFKLLSYASYCIEHGDLELAAKFVNQLKGESRRVAQDWLKEARMT
670 680 690 700 710 720
730 740
pF1KB5 LETKQIVEILTAYASAVGIGTTQVQPE
:::::::::::::::::::::::::::
CCDS46 LETKQIVEILTAYASAVGIGTTQVQPE
730 740
>>CCDS46355.1 IMMT gene_id:10989|Hs108|chr2 (758 aa)
initn: 3808 init1: 3808 opt: 3819 Z-score: 2519.1 bits: 476.8 E(32554): 5.4e-134
Smith-Waterman score: 4696; 98.5% identity (98.5% similar) in 758 aa overlap (1-747:1-758)
10 20 30 40 50 60
pF1KB5 MLRACQLSGVTAAAQSCLCGKFVLRPLRPCRRYSTSGSSGLTTGKIAGAGLLFVGGGIGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 MLRACQLSGVTAAAQSCLCGKFVLRPLRPCRRYSTSGSSGLTTGKIAGAGLLFVGGGIGG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 TILYAKWDSHFRESVEKTIPYSDKLFEMVLGPAAYNVPLPKKSIQSGPLKISSVSEVMKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 TILYAKWDSHFRESVEKTIPYSDKLFEMVLGPAAYNVPLPKKSIQSGPLKISSVSEVMKE
70 80 90 100 110 120
130 140 150 160
pF1KB5 SKQPASQLQKQKGDTPASATA-----------GDTLSVPAPAVQPEESLKTDHPEIGEGK
::::::::::::::::::::: ::::::::::::::::::::::::::::
CCDS46 SKQPASQLQKQKGDTPASATAPTEAAQIISAAGDTLSVPAPAVQPEESLKTDHPEIGEGK
130 140 150 160 170 180
170 180 190 200 210 220
pF1KB5 PTPALSEEASSSSIRERPPEEVAARLAQQEKQEQVKIESLAKSLEDALRQTASVTLQAIA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 PTPALSEEASSSSIRERPPEEVAARLAQQEKQEQVKIESLAKSLEDALRQTASVTLQAIA
190 200 210 220 230 240
230 240 250 260 270 280
pF1KB5 AQNAAVQAVNAHSNILKAAMDNSEIAGEKKSAQWRTVEGALKERRKAVDEAADALLKAKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 AQNAAVQAVNAHSNILKAAMDNSEIAGEKKSAQWRTVEGALKERRKAVDEAADALLKAKE
250 260 270 280 290 300
290 300 310 320 330 340
pF1KB5 ELEKMKSVIENAKKKEVAGAKPHITAAEGKLHNMIVDLDNVVKKVQAAQSEAKVVSQYHE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 ELEKMKSVIENAKKKEVAGAKPHITAAEGKLHNMIVDLDNVVKKVQAAQSEAKVVSQYHE
310 320 330 340 350 360
350 360 370 380 390 400
pF1KB5 LVVQARDDFKRELDSITPEVLPGWKGMSVSDLADKLSTDDLNSLIAHAHRRIDQLNRELA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 LVVQARDDFKRELDSITPEVLPGWKGMSVSDLADKLSTDDLNSLIAHAHRRIDQLNRELA
370 380 390 400 410 420
410 420 430 440 450 460
pF1KB5 EQKATEKQHITLALEKQKLEEKRAFDSAVAKALEHHRSEIQAEQDRKIEEVRDAMENEMR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 EQKATEKQHITLALEKQKLEEKRAFDSAVAKALEHHRSEIQAEQDRKIEEVRDAMENEMR
430 440 450 460 470 480
470 480 490 500 510 520
pF1KB5 TQLRRQAAAHTDHLRDVLRVQEQELKSEFEQNLSEKLSEQELQFRRLSQEQVDNFTLDIN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 TQLRRQAAAHTDHLRDVLRVQEQELKSEFEQNLSEKLSEQELQFRRLSQEQVDNFTLDIN
490 500 510 520 530 540
530 540 550 560 570 580
pF1KB5 TAYARLRGIEQAVQSHAVAEEEARKAHQLWLSVEALKYSMKTSSAETPTIPLGSAVEAIK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 TAYARLRGIEQAVQSHAVAEEEARKAHQLWLSVEALKYSMKTSSAETPTIPLGSAVEAIK
550 560 570 580 590 600
590 600 610 620 630 640
pF1KB5 ANCSDNEFTQALTAAIPPESLTRGVYSEETLRARFYAVQKLARRVAMIDETRNSLYQYFL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 ANCSDNEFTQALTAAIPPESLTRGVYSEETLRARFYAVQKLARRVAMIDETRNSLYQYFL
610 620 630 640 650 660
650 660 670 680 690 700
pF1KB5 SYLQSLLLFPPQQLKPPPELCPEDINTFKLLSYASYCIEHGDLELAAKFVNQLKGESRRV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 SYLQSLLLFPPQQLKPPPELCPEDINTFKLLSYASYCIEHGDLELAAKFVNQLKGESRRV
670 680 690 700 710 720
710 720 730 740
pF1KB5 AQDWLKEARMTLETKQIVEILTAYASAVGIGTTQVQPE
::::::::::::::::::::::::::::::::::::::
CCDS46 AQDWLKEARMTLETKQIVEILTAYASAVGIGTTQVQPE
730 740 750
>>CCDS46356.1 IMMT gene_id:10989|Hs108|chr2 (757 aa)
initn: 4510 init1: 3568 opt: 3801 Z-score: 2507.3 bits: 474.6 E(32554): 2.4e-133
Smith-Waterman score: 4678; 98.4% identity (98.4% similar) in 758 aa overlap (1-747:1-757)
10 20 30 40 50 60
pF1KB5 MLRACQLSGVTAAAQSCLCGKFVLRPLRPCRRYSTSGSSGLTTGKIAGAGLLFVGGGIGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 MLRACQLSGVTAAAQSCLCGKFVLRPLRPCRRYSTSGSSGLTTGKIAGAGLLFVGGGIGG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 TILYAKWDSHFRESVEKTIPYSDKLFEMVLGPAAYNVPLPKKSIQSGPLKISSVSEVMKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 TILYAKWDSHFRESVEKTIPYSDKLFEMVLGPAAYNVPLPKKSIQSGPLKISSVSEVMKE
70 80 90 100 110 120
130 140 150 160
pF1KB5 SKQPASQLQKQKGDTPASATA-----------GDTLSVPAPAVQPEESLKTDHPEIGEGK
::::::::::::::::::::: ::::::::::::::::::::::::::::
CCDS46 SKQPASQLQKQKGDTPASATAPTEAAQIISAAGDTLSVPAPAVQPEESLKTDHPEIGEGK
130 140 150 160 170 180
170 180 190 200 210 220
pF1KB5 PTPALSEEASSSSIRERPPEEVAARLAQQEKQEQVKIESLAKSLEDALRQTASVTLQAIA
::::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 PTPALSE-ASSSSIRERPPEEVAARLAQQEKQEQVKIESLAKSLEDALRQTASVTLQAIA
190 200 210 220 230
230 240 250 260 270 280
pF1KB5 AQNAAVQAVNAHSNILKAAMDNSEIAGEKKSAQWRTVEGALKERRKAVDEAADALLKAKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 AQNAAVQAVNAHSNILKAAMDNSEIAGEKKSAQWRTVEGALKERRKAVDEAADALLKAKE
240 250 260 270 280 290
290 300 310 320 330 340
pF1KB5 ELEKMKSVIENAKKKEVAGAKPHITAAEGKLHNMIVDLDNVVKKVQAAQSEAKVVSQYHE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 ELEKMKSVIENAKKKEVAGAKPHITAAEGKLHNMIVDLDNVVKKVQAAQSEAKVVSQYHE
300 310 320 330 340 350
350 360 370 380 390 400
pF1KB5 LVVQARDDFKRELDSITPEVLPGWKGMSVSDLADKLSTDDLNSLIAHAHRRIDQLNRELA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 LVVQARDDFKRELDSITPEVLPGWKGMSVSDLADKLSTDDLNSLIAHAHRRIDQLNRELA
360 370 380 390 400 410
410 420 430 440 450 460
pF1KB5 EQKATEKQHITLALEKQKLEEKRAFDSAVAKALEHHRSEIQAEQDRKIEEVRDAMENEMR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 EQKATEKQHITLALEKQKLEEKRAFDSAVAKALEHHRSEIQAEQDRKIEEVRDAMENEMR
420 430 440 450 460 470
470 480 490 500 510 520
pF1KB5 TQLRRQAAAHTDHLRDVLRVQEQELKSEFEQNLSEKLSEQELQFRRLSQEQVDNFTLDIN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 TQLRRQAAAHTDHLRDVLRVQEQELKSEFEQNLSEKLSEQELQFRRLSQEQVDNFTLDIN
480 490 500 510 520 530
530 540 550 560 570 580
pF1KB5 TAYARLRGIEQAVQSHAVAEEEARKAHQLWLSVEALKYSMKTSSAETPTIPLGSAVEAIK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 TAYARLRGIEQAVQSHAVAEEEARKAHQLWLSVEALKYSMKTSSAETPTIPLGSAVEAIK
540 550 560 570 580 590
590 600 610 620 630 640
pF1KB5 ANCSDNEFTQALTAAIPPESLTRGVYSEETLRARFYAVQKLARRVAMIDETRNSLYQYFL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 ANCSDNEFTQALTAAIPPESLTRGVYSEETLRARFYAVQKLARRVAMIDETRNSLYQYFL
600 610 620 630 640 650
650 660 670 680 690 700
pF1KB5 SYLQSLLLFPPQQLKPPPELCPEDINTFKLLSYASYCIEHGDLELAAKFVNQLKGESRRV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 SYLQSLLLFPPQQLKPPPELCPEDINTFKLLSYASYCIEHGDLELAAKFVNQLKGESRRV
660 670 680 690 700 710
710 720 730 740
pF1KB5 AQDWLKEARMTLETKQIVEILTAYASAVGIGTTQVQPE
::::::::::::::::::::::::::::::::::::::
CCDS46 AQDWLKEARMTLETKQIVEILTAYASAVGIGTTQVQPE
720 730 740 750
747 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 15:26:26 2016 done: Sat Nov 5 15:26:27 2016
Total Scan time: 4.480 Total Display time: 0.070
Function used was FASTA [36.3.4 Apr, 2011]