FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB5707, 782 aa
  1>>>pF1KB5707 782 - 782 aa - 782 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 8.0172+/-0.000933; mu= 8.7592+/- 0.056
 mean_var=150.3281+/-30.216, 0's: 0 Z-trim(110.8): 18  B-trim: 0 in 0/51
 Lambda= 0.104605
 statistics sampled from 11838 (11851) to 11838 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.71), E-opt: 0.2 (0.364), width:  16
 Scan time:  4.580

The best scores are:                                      opt bits E(32554)
CCDS13133.1 KAT14 gene_id:57325|Hs108|chr20        ( 782) 5271 807.6       0


>>CCDS13133.1 KAT14 gene_id:57325|Hs108|chr20             (782 aa)
 initn: 5271 init1: 5271 opt: 5271  Z-score: 4306.2  bits: 807.6 E(32554):    0
Smith-Waterman score: 5271; 99.9% identity (99.9% similar) in 782 aa overlap (1-782:1-782)

               10        20        30        40        50        60
pF1KB5 MDSSIHLSSLISRHDDEATRTSTSEGLEEGEVEGETLLIVESEDQASVDLSHDQSGDSLN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 MDSSIHLSSLISRHDDEATRTSTSEGLEEGEVEGETLLIVESEDQASVDLSHDQSGDSLN
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 SDEGDVSWMEEQLSYFCDKCQKWIPASQLREQLSYLKGDNFFRFTCSDCSADGKEQYERL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 SDEGDVSWMEEQLSYFCDKCQKWIPASQLREQLSYLKGDNFFRFTCSDCSADGKEQYERL
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB5 KLTWQQVVMLAMYNLSLEGSGRQGYFRWKEDICAFIEKHWTFLLGNRKKTSTWWSTVAGC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 KLTWQQVVMLAMYNLSLEGSGRQGYFRWKEDICAFIEKHWTFLLGNRKKTSTWWSTVAGC
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB5 LSVGSPMYFRSGAQEFGEPGWWKLVHNKPPTMKPEGEKLSASTLKIKAASKPTLDPIITV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 LSVGSPMYFRSGAQEFGEPGWWKLVHNKPPTMKPEGEKLSASTLKIKAASKPTLDPIITV
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB5 EGLRKRASRNPVESAMELKEKRSRTQEAKDIRRAQKEAAGFLDRSTSSTPVKFISRGRRP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 EGLRKRASRNPVESAMELKEKRSRTQEAKDIRRAQKEAAGFLDRSTSSTPVKFISRGRRP
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB5 DVILEKGEVIDFSSLSSSDRTPLTSPSPSPSLDFSAPGTPASHSATPSLLSEADLIPDVM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 DVILEKGEVIDFSSLSSSDRTPLTSPSPSPSLDFSAPGTPASHSATPSLLSEADLIPDVM
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB5 PPQALFHDDDEMEGDGVIDPGMEYVPPPAGSVASGPVVGGRKKVRGPEQIKQEVESEEEK
       ::::::::::::::::::::::::::::::::::::::: ::::::::::::::::::::
CCDS13 PPQALFHDDDEMEGDGVIDPGMEYVPPPAGSVASGPVVGVRKKVRGPEQIKQEVESEEEK
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB5 PDRMDIDSEDTDSNTSLQTRAREKRKPQLEKDTKPKEPRYTPVSIYEEKLLLKRLEACPG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 PDRMDIDSEDTDSNTSLQTRAREKRKPQLEKDTKPKEPRYTPVSIYEEKLLLKRLEACPG
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KB5 AVAMTPEARRLKRKLIVRQAKRDRGLPLFDLDQVVNAALLLVDGIYGAKEGGISRLPAGQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 AVAMTPEARRLKRKLIVRQAKRDRGLPLFDLDQVVNAALLLVDGIYGAKEGGISRLPAGQ
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KB5 ATYRTTCQDFRILDRYQTSLPSRKGFRHQTTKFLYRLVGSEDMAVDQSIVSPYTSRILKP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 ATYRTTCQDFRILDRYQTSLPSRKGFRHQTTKFLYRLVGSEDMAVDQSIVSPYTSRILKP
              550       560       570       580       590       600

              610       620       630       640       650       660
pF1KB5 YIRRDYETKPPKLQLLSQIRSHLHRSDPHWTPEPDAPLDYCYVRPNHIPTINSMCQEFFW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 YIRRDYETKPPKLQLLSQIRSHLHRSDPHWTPEPDAPLDYCYVRPNHIPTINSMCQEFFW
              610       620       630       640       650       660

              670       680       690       700       710       720
pF1KB5 PGIDLSECLQYPDFSVVVLYKKVIIAFGFMVPDVKYNEAYISFLFVHPEWRRAGIATFMI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 PGIDLSECLQYPDFSVVVLYKKVIIAFGFMVPDVKYNEAYISFLFVHPEWRRAGIATFMI
              670       680       690       700       710       720

              730       740       750       760       770       780
pF1KB5 YHLIQTCMGKDVTLHVSASNPAMLLYQKFGFKTEEYVLDFYDKYYPLESTECKHAFFLRL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 YHLIQTCMGKDVTLHVSASNPAMLLYQKFGFKTEEYVLDFYDKYYPLESTECKHAFFLRL
              730       740       750       760       770       780

         
pF1KB5 RR
       ::
CCDS13 RR
         




782 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sat Nov  5 16:07:40 2016 done: Sat Nov  5 16:07:41 2016
 Total Scan time:  4.580 Total Display time: -0.010

Function used was FASTA [36.3.4 Apr, 2011]