Result of FASTA (ccds) for
pF1KB5632
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB5632, 269 aa
1>>>pF1KB5632 269 - 269 aa - 269 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.3674+/-0.000811; mu= 15.3985+/- 0.049
mean_var=82.7496+/-16.592, 0's: 0 Z-trim(108.9): 53 B-trim: 108 in 1/51
Lambda= 0.140991
statistics sampled from 10486 (10538) to 10486 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.706), E-opt: 0.2 (0.324), width: 16
Scan time: 2.250
The best scores are: opt bits E(32554)
CCDS1264.1 MPZL1 gene_id:9019|Hs108|chr1 ( 269) 1776 370.6 6.4e-103
CCDS44273.1 MPZL1 gene_id:9019|Hs108|chr1 ( 209) 1333 280.4 7.1e-76
CCDS53425.1 MPZL1 gene_id:9019|Hs108|chr1 ( 119) 547 120.3 6.2e-28
CCDS1229.2 MPZ gene_id:4359|Hs108|chr1 ( 248) 426 96.0 2.8e-20
CCDS8393.1 MPZL2 gene_id:10205|Hs108|chr11 ( 215) 349 80.3 1.3e-15
CCDS8392.1 MPZL3 gene_id:196264|Hs108|chr11 ( 235) 307 71.8 5.1e-13
CCDS66241.1 MPZL3 gene_id:196264|Hs108|chr11 ( 223) 300 70.3 1.3e-12
>>CCDS1264.1 MPZL1 gene_id:9019|Hs108|chr1 (269 aa)
initn: 1776 init1: 1776 opt: 1776 Z-score: 1961.2 bits: 370.6 E(32554): 6.4e-103
Smith-Waterman score: 1776; 100.0% identity (100.0% similar) in 269 aa overlap (1-269:1-269)
10 20 30 40 50 60
pF1KB5 MAASAGAGAVIAAPDSRRWLWSVLAAALGLLTAGVSALEVYTPKEIFVANGTQGKLTCKF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 MAASAGAGAVIAAPDSRRWLWSVLAAALGLLTAGVSALEVYTPKEIFVANGTQGKLTCKF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 KSTSTTGGLTSVSWSFQPEGADTTVSFFHYSQGQVYLGNYPPFKDRISWAGDLDKKDASI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 KSTSTTGGLTSVSWSFQPEGADTTVSFFHYSQGQVYLGNYPPFKDRISWAGDLDKKDASI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 NIENMQFIHNGTYICDVKNPPDIVVQPGHIRLYVVEKENLPVFPVWVVVGIVTAVVLGLT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 NIENMQFIHNGTYICDVKNPPDIVVQPGHIRLYVVEKENLPVFPVWVVVGIVTAVVLGLT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 LLISMILAVLYRRKNSKRDYTGCSTSESLSPVKQAPRKSPSDTEGLVKSLPSGSHQGPVI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 LLISMILAVLYRRKNSKRDYTGCSTSESLSPVKQAPRKSPSDTEGLVKSLPSGSHQGPVI
190 200 210 220 230 240
250 260
pF1KB5 YAQLDHSGGHHSDKINKSESVVYADIRKN
:::::::::::::::::::::::::::::
CCDS12 YAQLDHSGGHHSDKINKSESVVYADIRKN
250 260
>>CCDS44273.1 MPZL1 gene_id:9019|Hs108|chr1 (209 aa)
initn: 1349 init1: 1333 opt: 1333 Z-score: 1475.7 bits: 280.4 E(32554): 7.1e-76
Smith-Waterman score: 1333; 98.5% identity (99.5% similar) in 205 aa overlap (1-205:1-205)
10 20 30 40 50 60
pF1KB5 MAASAGAGAVIAAPDSRRWLWSVLAAALGLLTAGVSALEVYTPKEIFVANGTQGKLTCKF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 MAASAGAGAVIAAPDSRRWLWSVLAAALGLLTAGVSALEVYTPKEIFVANGTQGKLTCKF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 KSTSTTGGLTSVSWSFQPEGADTTVSFFHYSQGQVYLGNYPPFKDRISWAGDLDKKDASI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 KSTSTTGGLTSVSWSFQPEGADTTVSFFHYSQGQVYLGNYPPFKDRISWAGDLDKKDASI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 NIENMQFIHNGTYICDVKNPPDIVVQPGHIRLYVVEKENLPVFPVWVVVGIVTAVVLGLT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 NIENMQFIHNGTYICDVKNPPDIVVQPGHIRLYVVEKENLPVFPVWVVVGIVTAVVLGLT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 LLISMILAVLYRRKNSKRDYTGCSTSESLSPVKQAPRKSPSDTEGLVKSLPSGSHQGPVI
:::::::::::::::::::::: ..
CCDS44 LLISMILAVLYRRKNSKRDYTGAQSYMHS
190 200
>>CCDS53425.1 MPZL1 gene_id:9019|Hs108|chr1 (119 aa)
initn: 754 init1: 547 opt: 547 Z-score: 615.0 bits: 120.3 E(32554): 6.2e-28
Smith-Waterman score: 547; 100.0% identity (100.0% similar) in 86 aa overlap (1-86:1-86)
10 20 30 40 50 60
pF1KB5 MAASAGAGAVIAAPDSRRWLWSVLAAALGLLTAGVSALEVYTPKEIFVANGTQGKLTCKF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 MAASAGAGAVIAAPDSRRWLWSVLAAALGLLTAGVSALEVYTPKEIFVANGTQGKLTCKF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 KSTSTTGGLTSVSWSFQPEGADTTVSFFHYSQGQVYLGNYPPFKDRISWAGDLDKKDASI
::::::::::::::::::::::::::
CCDS53 KSTSTTGGLTSVSWSFQPEGADTTVSGPVIYAQLDHSGGHHSDKINKSESVVYADIRKN
70 80 90 100 110
>>CCDS1229.2 MPZ gene_id:4359|Hs108|chr1 (248 aa)
initn: 494 init1: 382 opt: 426 Z-score: 477.6 bits: 96.0 E(32554): 2.8e-20
Smith-Waterman score: 455; 37.4% identity (67.4% similar) in 227 aa overlap (23-247:13-226)
10 20 30 40 50
pF1KB5 MAASAGAGAVIAAPDSRRWLWSVLAAAL--GLLTAGVSALEVYTPKEIFVANGTQGKLTC
.::. : .:. . ..:. ::: .:. : :.. : :
CCDS12 MAPGAPSSSPSPILAVLLFSSLVLSPAQAIVVYTDREVHGAVGSRVTLHC
10 20 30 40 50
60 70 80 90 100 110
pF1KB5 KFKSTSTTGGLTSVSWSFQPEGADTTVSFFHYSQGQVYLGNYPPFKDRISWAGDLDKKDA
.: :. .. : .: .::::. ..:.:::..:: :. . ::.::.:.:: ::.
CCDS12 SFWSSEWVSDDISFTWRYQPEGGRDAISIFHYAKGQPYIDEVGTFKERIQWVGDPRWKDG
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB5 SINIENMQFIHNGTYICDVKNPPDIVVQPGHIRLYVVEKENLPVFPVWVVVGIVTAVVLG
:: :.:... :::. :::::::::: . ... ::: :: .:. ::.: : . :::
CCDS12 SIVIHNLDYSDNGTFTCDVKNPPDIVGKTSQVTLYVFEK--VPTR-YGVVLGAVIGGVLG
120 130 140 150 160
180 190 200 210 220 230
pF1KB5 LTLLISMILAVLYRRKNSKRDYTGCSTSESLSPVKQAPRKSPSDTEGLVKSLPSGSHQGP
..::. ... :. : .:. . .. :: .... ..:. :. . ..: :
CCDS12 VVLLLLLLFYVV-RYCWLRRQ---AALQRRLSAMEKGKLHKPG------KDASKRGRQTP
170 180 190 200 210
240 250 260
pF1KB5 VIYAQLDHSGGHHSDKINKSESVVYADIRKN
:.::.::::
CCDS12 VLYAMLDHSRSTKAVSEKKAKGLGESRKDKK
220 230 240
>>CCDS8393.1 MPZL2 gene_id:10205|Hs108|chr11 (215 aa)
initn: 295 init1: 200 opt: 349 Z-score: 393.8 bits: 80.3 E(32554): 1.3e-15
Smith-Waterman score: 349; 37.2% identity (66.3% similar) in 172 aa overlap (28-194:14-181)
10 20 30 40 50
pF1KB5 MAASAGAGAVIAAPDSRRWLWSVLAAALGL-LTA--GVSALEVYTPKEIFVANGTQGKLT
::. ::: ..:.:.:: . . ..:::...:
CCDS83 MYGKSSTRAVLLLLGIQLTALWPIAAVEIYTSRVLEAVNGTDARLK
10 20 30 40
60 70 80 90 100 110
pF1KB5 CKFKSTSTTGGLTSVSWSFQPE--GADTTVSFFHYSQGQVYLGNYPPFKDRISWAGDLDK
: :.: . .: .:.:.:.: : . : ..: . : . : ::::.:: :. ..
CCDS83 CTFSSFAPVGDALTVTWNFRPLDGGPEQFVFYYHIDPFQPMSGR---FKDRVSWDGNPER
50 60 70 80 90 100
120 130 140 150 160 170
pF1KB5 KDASINIENMQFIHNGTYICDVKNPPDIVVQPGHIRLYVVEKENLPVFPVWVVVGIVTAV
:::: . ..:: :::: :.::::::. :.::: ::. . . .....: .:
CCDS83 YDASILLWKLQFDDNGTYTCQVKNPPDVDGVIGEIRLSVVHTVRFSEIH-FLALAIGSAC
110 120 130 140 150 160
180 190 200 210 220 230
pF1KB5 VLGLTLLISMILAVLYRRKNSKRDYTGCSTSESLSPVKQAPRKSPSDTEGLVKSLPSGSH
.: . ..: ..: ::.:
CCDS83 ALMIIIVIVVVLFQHYRKKRWAERAHKVVEIKSKEEERLNQEKKVSVYLEDTD
170 180 190 200 210
>>CCDS8392.1 MPZL3 gene_id:196264|Hs108|chr11 (235 aa)
initn: 292 init1: 174 opt: 307 Z-score: 347.1 bits: 71.8 E(32554): 5.1e-13
Smith-Waterman score: 307; 35.1% identity (60.9% similar) in 174 aa overlap (35-204:29-200)
10 20 30 40 50 60
pF1KB5 AGAGAVIAAPDSRRWLWSVLAAALGLLTAGVSALEVYTPKEIFVANGTQGKLTCKFKSTS
: .::. . .. : . :: : :::::
CCDS83 MQQRGAAGSRGCALFPLLGVLFFQGVYIVFSLEIRADAHVRGYVGEKIKLKCTFKSTS
10 20 30 40 50
70 80 90 100 110 120
pF1KB5 TTGGLTSVSWSFQPEGADTTVSFFHYSQGQVYLGNYPPFKDRISWAGDLDKKDASINIEN
. ...:...: ... :::.:::.. : : . :.:::::.:.. : ::::.: :
CCDS83 DVTDKLTIDWTYRPPSSSHTVSIFHYQSFQ-YPTTAGTFRDRISWVGNVYKGDASISISN
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB5 MQFIHNGTYICDVKNPPDIVVQPGHIRLYVVEKENLPVFP----VWVVVGIVTAVVLGLT
. :::. : ::::::. . .: :.:. .. . ..: . .:::..:
CCDS83 PTIKDNGTFSCAVKNPPDVHHNIPMTELTVTERGFGTMLSSVALLSILVFVPSAVVVAL-
120 130 140 150 160 170
190 200 210 220 230 240
pF1KB5 LLISMILAVLYRRKNSKRDYTGCSTSESLSPVKQAPRKSPSDTEGLVKSLPSGSHQGPVI
::. : . .: :. : :
CCDS83 LLVRMGRKAAGLKKRSRSGYKKSSIEVSDDTDQEEEEACMARLCVRCAECLDSDYEETY
180 190 200 210 220 230
>>CCDS66241.1 MPZL3 gene_id:196264|Hs108|chr11 (223 aa)
initn: 283 init1: 174 opt: 300 Z-score: 339.8 bits: 70.3 E(32554): 1.3e-12
Smith-Waterman score: 300; 37.3% identity (61.4% similar) in 158 aa overlap (51-204:33-188)
30 40 50 60 70 80
pF1KB5 WSVLAAALGLLTAGVSALEVYTPKEIFVANGTQGKLTCKFKSTSTTGGLTSVSWSFQPEG
: . :: : ::::: . ...:...: .
CCDS66 QRGAAGSRGCALFPLLGVLFFQDAHVRGYVGEKIKLKCTFKSTSDVTDKLTIDWTYRPPS
10 20 30 40 50 60
90 100 110 120 130 140
pF1KB5 ADTTVSFFHYSQGQVYLGNYPPFKDRISWAGDLDKKDASINIENMQFIHNGTYICDVKNP
.. :::.:::.. : : . :.:::::.:.. : ::::.: : . :::. : ::::
CCDS66 SSHTVSIFHYQSFQ-YPTTAGTFRDRISWVGNVYKGDASISISNPTIKDNGTFSCAVKNP
70 80 90 100 110 120
150 160 170 180 190
pF1KB5 PDIVVQPGHIRLYVVEK---ENLPVFPVW-VVVGIVTAVVLGLTLLISMILAVLYRRKNS
::. . .: :.:. : . ..: . .:::..: ::. : . .: :
CCDS66 PDVHHNIPMTELTVTERGFGTMLSSVALLSILVFVPSAVVVAL-LLVRMGRKAAGLKKRS
130 140 150 160 170 180
200 210 220 230 240 250
pF1KB5 KRDYTGCSTSESLSPVKQAPRKSPSDTEGLVKSLPSGSHQGPVIYAQLDHSGGHHSDKIN
. : :
CCDS66 RSGYKKSSIEVSDDTDQEEEEACMARLCVRCAECLDSDYEETY
190 200 210 220
269 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 13:08:26 2016 done: Sat Nov 5 13:08:27 2016
Total Scan time: 2.250 Total Display time: -0.030
Function used was FASTA [36.3.4 Apr, 2011]