Result of FASTA (omim) for
pF1KB5607
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB5607, 465 aa
1>>>pF1KB5607 465 - 465 aa - 465 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.7861+/-0.000378; mu= 15.6080+/- 0.023
mean_var=92.0468+/-17.742, 0's: 0 Z-trim(115.5): 136 B-trim: 0 in 0/52
Lambda= 0.133681
statistics sampled from 25888 (26050) to 25888 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.677), E-opt: 0.2 (0.305), width: 16
Scan time: 8.950
The best scores are: opt bits E(85289)
NP_055282 (OMIM: 300642,300643) sushi repeat-conta ( 465) 3280 643.0 5.1e-184
NP_006298 (OMIM: 300187) sushi repeat-containing p ( 464) 1542 307.8 4.1e-83
NP_001164221 (OMIM: 300187) sushi repeat-containin ( 444) 1523 304.1 5e-82
XP_016885382 (OMIM: 300187) PREDICTED: sushi repea ( 419) 1401 280.6 5.8e-75
NP_001164223 (OMIM: 300187) sushi repeat-containin ( 379) 1269 255.1 2.5e-67
NP_001164222 (OMIM: 300187) sushi repeat-containin ( 405) 1209 243.5 7.9e-64
NP_000441 (OMIM: 131210,145500) E-selectin precurs ( 610) 247 58.1 7.7e-08
NP_000646 (OMIM: 153240) L-selectin precursor [Hom ( 385) 227 54.1 7.8e-07
XP_011533056 (OMIM: 608397) PREDICTED: CUB and sus (2238) 229 55.1 2.3e-06
XP_011533055 (OMIM: 608397) PREDICTED: CUB and sus (2595) 229 55.1 2.6e-06
XP_016869220 (OMIM: 608397) PREDICTED: CUB and sus (3327) 229 55.2 3.2e-06
XP_011533054 (OMIM: 608397) PREDICTED: CUB and sus (3549) 229 55.2 3.3e-06
NP_150094 (OMIM: 608397) CUB and sushi domain-cont (3564) 229 55.2 3.3e-06
NP_443132 (OMIM: 608399) CUB and sushi domain-cont (3538) 224 54.3 6.5e-06
XP_011515117 (OMIM: 608399) PREDICTED: CUB and sus (2173) 220 53.3 7.6e-06
XP_016868501 (OMIM: 608399) PREDICTED: CUB and sus (3463) 220 53.5 1.1e-05
XP_016868500 (OMIM: 608399) PREDICTED: CUB and sus (3507) 220 53.5 1.1e-05
XP_016868499 (OMIM: 608399) PREDICTED: CUB and sus (3577) 220 53.5 1.1e-05
XP_011515118 (OMIM: 608399) PREDICTED: CUB and sus (3603) 220 53.5 1.1e-05
NP_001701 (OMIM: 138470,612924,615489,615561) comp ( 764) 211 51.3 1.1e-05
XP_016868498 (OMIM: 608399) PREDICTED: CUB and sus (3637) 220 53.5 1.1e-05
NP_937757 (OMIM: 608399) CUB and sushi domain-cont (3667) 220 53.5 1.1e-05
XP_016868497 (OMIM: 608399) PREDICTED: CUB and sus (3681) 220 53.5 1.1e-05
NP_937756 (OMIM: 608399) CUB and sushi domain-cont (3707) 220 53.5 1.1e-05
NP_001269388 (OMIM: 217000,613927,615489) compleme ( 328) 203 49.4 1.7e-05
XP_016855679 (OMIM: 608398) PREDICTED: CUB and sus (3362) 212 51.9 3.1e-05
XP_016855678 (OMIM: 608398) PREDICTED: CUB and sus (3506) 212 51.9 3.2e-05
NP_000054 (OMIM: 217000,613927,615489) complement ( 752) 203 49.7 3.2e-05
XP_016855683 (OMIM: 608398) PREDICTED: CUB and sus (3566) 212 52.0 3.2e-05
XP_016855677 (OMIM: 608398) PREDICTED: CUB and sus (3567) 212 52.0 3.2e-05
XP_016855676 (OMIM: 608398) PREDICTED: CUB and sus (3606) 212 52.0 3.3e-05
XP_016855674 (OMIM: 608398) PREDICTED: CUB and sus (3607) 212 52.0 3.3e-05
XP_016855675 (OMIM: 608398) PREDICTED: CUB and sus (3607) 212 52.0 3.3e-05
NP_001269387 (OMIM: 217000,613927,615489) compleme ( 723) 201 49.3 4.1e-05
XP_011507508 (OMIM: 120650,240500,610927,614699) P ( 969) 202 49.6 4.5e-05
NP_001006659 (OMIM: 120650,240500,610927,614699) c (1092) 202 49.6 4.9e-05
NP_443128 (OMIM: 608398) CUB and sushi domain-cont (3487) 208 51.2 5.4e-05
NP_000565 (OMIM: 125240,613793) complement decay-a ( 381) 194 47.8 6.4e-05
NP_001287833 (OMIM: 125240,613793) complement deca ( 384) 194 47.8 6.4e-05
XP_016855956 (OMIM: 125240,613793) PREDICTED: comp ( 412) 194 47.8 6.8e-05
NP_001287832 (OMIM: 125240,613793) complement deca ( 439) 194 47.8 7.1e-05
NP_001108224 (OMIM: 125240,613793) complement deca ( 440) 194 47.8 7.1e-05
NP_001287831 (OMIM: 125240,613793) complement deca ( 444) 194 47.8 7.2e-05
XP_016855680 (OMIM: 608398) PREDICTED: CUB and sus (2973) 202 50.0 0.00011
NP_699197 (OMIM: 611691) sushi, von Willebrand fac (3571) 202 50.0 0.00012
XP_005245497 (OMIM: 147050,173610) PREDICTED: P-se ( 768) 181 45.5 0.00062
XP_005245495 (OMIM: 147050,173610) PREDICTED: P-se ( 790) 181 45.5 0.00064
XP_005245496 (OMIM: 147050,173610) PREDICTED: P-se ( 790) 181 45.5 0.00064
XP_005245493 (OMIM: 147050,173610) PREDICTED: P-se ( 830) 181 45.5 0.00066
NP_002996 (OMIM: 147050,173610) P-selectin precurs ( 830) 181 45.5 0.00066
>>NP_055282 (OMIM: 300642,300643) sushi repeat-containin (465 aa)
initn: 3280 init1: 3280 opt: 3280 Z-score: 3424.7 bits: 643.0 E(85289): 5.1e-184
Smith-Waterman score: 3280; 100.0% identity (100.0% similar) in 465 aa overlap (1-465:1-465)
10 20 30 40 50 60
pF1KB5 MASQLTQRGALFLLFFLTPAVTPTWYAGSGYYPDESYNEVYAEEVPQAPALDYRVPRWCY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 MASQLTQRGALFLLFFLTPAVTPTWYAGSGYYPDESYNEVYAEEVPQAPALDYRVPRWCY
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 TLNIQDGEATCYSPKGGNYHSSLGTRCELSCDRGFRLIGRRSVQCLPSRRWSGTAYCRQM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 TLNIQDGEATCYSPKGGNYHSSLGTRCELSCDRGFRLIGRRSVQCLPSRRWSGTAYCRQM
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 RCHALPFITSGTYTCTNGVLLDSRCDYSCSSGYHLEGDRSRICMEDGRWSGGEPVCVDID
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 RCHALPFITSGTYTCTNGVLLDSRCDYSCSSGYHLEGDRSRICMEDGRWSGGEPVCVDID
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 PPKIRCPHSREKMAEPEKLTARVYWDPPLVKDSADGTITRVTLRGPEPGSHFPEGEHVIR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 PPKIRCPHSREKMAEPEKLTARVYWDPPLVKDSADGTITRVTLRGPEPGSHFPEGEHVIR
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 YTAYDRAYNRASCKFIVKVQVRRCPTLKPPQHGYLTCTSAGDNYGATCEYHCDGGYDRQG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 YTAYDRAYNRASCKFIVKVQVRRCPTLKPPQHGYLTCTSAGDNYGATCEYHCDGGYDRQG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 TPSRVCQSSRQWSGSPPICAPMKINVNVNSAAGLLDQFYEKQRLLIISAPDPSNRYYKMQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 TPSRVCQSSRQWSGSPPICAPMKINVNVNSAAGLLDQFYEKQRLLIISAPDPSNRYYKMQ
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB5 ISMLQQSTCGLDLRHVTIIELVGQPPQEVGRIREQQLSANIIEELRQFQRLTRSYFNMVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 ISMLQQSTCGLDLRHVTIIELVGQPPQEVGRIREQQLSANIIEELRQFQRLTRSYFNMVL
370 380 390 400 410 420
430 440 450 460
pF1KB5 IDKQGIDRDRYMEPVTPEEIFTFIDDYLLSNQELTQRREQRDICE
:::::::::::::::::::::::::::::::::::::::::::::
NP_055 IDKQGIDRDRYMEPVTPEEIFTFIDDYLLSNQELTQRREQRDICE
430 440 450 460
>>NP_006298 (OMIM: 300187) sushi repeat-containing prote (464 aa)
initn: 1780 init1: 1521 opt: 1542 Z-score: 1613.2 bits: 307.8 E(85289): 4.1e-83
Smith-Waterman score: 1542; 45.9% identity (73.1% similar) in 453 aa overlap (13-464:17-462)
10 20 30 40 50
pF1KB5 MASQLTQRGALFLLFFLTPAVTPTW-YAGSGYYPDESYNEVYAEEVPQAPALDYRV
::..: : :. . ::: : :. . :.. :. :.
NP_006 MGSPAHRPALLLLLPPLLLLLLLRVPPSRSFPGSGDSPLEDDEVGYSH--PR-----YKD
10 20 30 40 50
60 70 80 90 100 110
pF1KB5 PRWCYTLNIQDGEATCYSPKGGNYHSSLGTRCELSCDRGFRLIGRRSVQCLPSRRWSGTA
:: .... :.. : .:.:: :...:::::.. :..:..: : . : ..::: .
NP_006 TPWCSPIKVKYGDVYCRAPQGGYYKTALGTRCDIRCQKGYELHGSSLLICQSNKRWSDKV
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB5 YCRQMRCHALPFITSGTYTCTNGVLLDSRCDYSCSSGYHLEGDRSRICMEDGRWSGGEPV
:.: :: .: . ..: . :..:. ..:::.: :: :: :.:.:. ::.. :::
NP_006 ICKQKRCPTLAMPANGGFKCVDGAYFNSRCEYYCSPGYTLKGERTVTCMDNKAWSGRPAS
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB5 CVDIDPPKIRCPHSREKMAEPEKLTARVYWDPPLVKDSADGTITRVTLRGPEPGSHFPEG
:::..::.:.:: .:..:::.:::.:: :. : .:.::: .: : :.: :::.::::
NP_006 CVDMEPPRIKCPSVKERIAEPNKLTVRVSWETPEGRDTADGILTDVILKGLPPGSNFPEG
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB5 EHVIRYTAYDRAYNRASCKFIVKVQVRRCPTLKPPQHGYLTCTSAGDNYGATCEYHCDGG
.: :.::.:::: :...::: :::.:.:: :. :..::. :.: :::::::::. : ::
NP_006 DHKIQYTVYDRAENKGTCKFRVKVRVKRCGKLNAPENGYMKCSSDGDNYGATCEFSCIGG
240 250 260 270 280 290
300 310 320 330 340 350
pF1KB5 YDRQGTPSRVCQSSRQWSGSPPICAPMKINVNVNSAAGLLDQFYEKQRLLIISAPDPSNR
:. ::.:.:::::. :::. : :: :..::.: .::.::::::::.::::.:.: :
NP_006 YELQGSPARVCQSNLAWSGTEPTCAAMNVNVGVRTAAALLDQFYEKRRLLIVSTPTARNL
300 310 320 330 340 350
360 370 380 390 400 410
pF1KB5 YYKMQISMLQQSTCGLDLRHVTIIELVGQPPQEVGRIREQQLSANIIEELRQFQRLTRSY
:..:..::::. :::::::.:..:::: : .::: . . . .:: . :.
NP_006 LYRLQLGMLQQAQCGLDLRHITVVELVGVFPTLIGRIGAKIMPPALALQLRLLLRIPLYS
360 370 380 390 400 410
420 430 440 450 460
pF1KB5 FNMVLIDKQGIDRDRYMEPVTPEEIFTFIDDYLLSNQELTQRREQRDICE
:.:::.::.:.:..::. : : .:..:: . : ..:.. . :. . :
NP_006 FSMVLVDKHGMDKERYVSLVMPVALFNLIDTFPLRKEEMVLQAEMSQTCNT
420 430 440 450 460
>>NP_001164221 (OMIM: 300187) sushi repeat-containing pr (444 aa)
initn: 1795 init1: 1521 opt: 1523 Z-score: 1593.7 bits: 304.1 E(85289): 5e-82
Smith-Waterman score: 1523; 47.1% identity (74.8% similar) in 420 aa overlap (45-464:25-442)
20 30 40 50 60 70
pF1KB5 FFLTPAVTPTWYAGSGYYPDESYNEVYAEEVPQAPALDYRVPRWCYTLNIQDGEATCYSP
:: :. .. :: .... :.. : .:
NP_001 MGSPAHRPALLLLLPPLLLLLLLRVP--PSRSFPDTPWCSPIKVKYGDVYCRAP
10 20 30 40 50
80 90 100 110 120 130
pF1KB5 KGGNYHSSLGTRCELSCDRGFRLIGRRSVQCLPSRRWSGTAYCRQMRCHALPFITSGTYT
.:: :...:::::.. :..:..: : . : ..::: . :.: :: .: . ..: .
NP_001 QGGYYKTALGTRCDIRCQKGYELHGSSLLICQSNKRWSDKVICKQKRCPTLAMPANGGFK
60 70 80 90 100 110
140 150 160 170 180 190
pF1KB5 CTNGVLLDSRCDYSCSSGYHLEGDRSRICMEDGRWSGGEPVCVDIDPPKIRCPHSREKMA
:..:. ..:::.: :: :: :.:.:. ::.. ::: :::..::.:.:: .:..:
NP_001 CVDGAYFNSRCEYYCSPGYTLKGERTVTCMDNKAWSGRPASCVDMEPPRIKCPSVKERIA
120 130 140 150 160 170
200 210 220 230 240 250
pF1KB5 EPEKLTARVYWDPPLVKDSADGTITRVTLRGPEPGSHFPEGEHVIRYTAYDRAYNRASCK
::.:::.:: :. : .:.::: .: : :.: :::.::::.: :.::.:::: :...::
NP_001 EPNKLTVRVSWETPEGRDTADGILTDVILKGLPPGSNFPEGDHKIQYTVYDRAENKGTCK
180 190 200 210 220 230
260 270 280 290 300 310
pF1KB5 FIVKVQVRRCPTLKPPQHGYLTCTSAGDNYGATCEYHCDGGYDRQGTPSRVCQSSRQWSG
: :::.:.:: :. :..::. :.: :::::::::. : :::. ::.:.:::::. :::
NP_001 FRVKVRVKRCGKLNAPENGYMKCSSDGDNYGATCEFSCIGGYELQGSPARVCQSNLAWSG
240 250 260 270 280 290
320 330 340 350 360 370
pF1KB5 SPPICAPMKINVNVNSAAGLLDQFYEKQRLLIISAPDPSNRYYKMQISMLQQSTCGLDLR
. : :: :..::.: .::.::::::::.::::.:.: : :..:..::::. ::::::
NP_001 TEPTCAAMNVNVGVRTAAALLDQFYEKRRLLIVSTPTARNLLYRLQLGMLQQAQCGLDLR
300 310 320 330 340 350
380 390 400 410 420 430
pF1KB5 HVTIIELVGQPPQEVGRIREQQLSANIIEELRQFQRLTRSYFNMVLIDKQGIDRDRYMEP
:.:..:::: : .::: . . . .:: . :. :.:::.::.:.:..::.
NP_001 HITVVELVGVFPTLIGRIGAKIMPPALALQLRLLLRIPLYSFSMVLVDKHGMDKERYVSL
360 370 380 390 400 410
440 450 460
pF1KB5 VTPEEIFTFIDDYLLSNQELTQRREQRDICE
: : .:..:: . : ..:.. . :. . :
NP_001 VMPVALFNLIDTFPLRKEEMVLQAEMSQTCNT
420 430 440
>>XP_016885382 (OMIM: 300187) PREDICTED: sushi repeat-co (419 aa)
initn: 1375 init1: 1375 opt: 1401 Z-score: 1466.8 bits: 280.6 E(85289): 5.8e-75
Smith-Waterman score: 1401; 47.3% identity (73.4% similar) in 402 aa overlap (13-413:17-410)
10 20 30 40 50
pF1KB5 MASQLTQRGALFLLFFLTPAVTPTW-YAGSGYYPDESYNEVYAEEVPQAPALDYRV
::..: : :. . ::: : :. . :.. :. :.
XP_016 MGSPAHRPALLLLLPPLLLLLLLRVPPSRSFPGSGDSPLEDDEVGYSH--PR-----YKD
10 20 30 40 50
60 70 80 90 100 110
pF1KB5 PRWCYTLNIQDGEATCYSPKGGNYHSSLGTRCELSCDRGFRLIGRRSVQCLPSRRWSGTA
:: .... :.. : .:.:: :...:::::.. :..:..: : . : ..::: .
XP_016 TPWCSPIKVKYGDVYCRAPQGGYYKTALGTRCDIRCQKGYELHGSSLLICQSNKRWSDKV
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB5 YCRQMRCHALPFITSGTYTCTNGVLLDSRCDYSCSSGYHLEGDRSRICMEDGRWSGGEPV
:.: :: .: . ..: . :..:. ..:::.: :: :: :.:.:. ::.. :::
XP_016 ICKQKRCPTLAMPANGGFKCVDGAYFNSRCEYYCSPGYTLKGERTVTCMDNKAWSGRPAS
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB5 CVDIDPPKIRCPHSREKMAEPEKLTARVYWDPPLVKDSADGTITRVTLRGPEPGSHFPEG
:::..::.:.:: .:..:::.:::.:: :. : .:.::: .: : :.: :::.::::
XP_016 CVDMEPPRIKCPSVKERIAEPNKLTVRVSWETPEGRDTADGILTDVILKGLPPGSNFPEG
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB5 EHVIRYTAYDRAYNRASCKFIVKVQVRRCPTLKPPQHGYLTCTSAGDNYGATCEYHCDGG
.: :.::.:::: :...::: :::.:.:: :. :..::. :.: :::::::::. : ::
XP_016 DHKIQYTVYDRAENKGTCKFRVKVRVKRCGKLNAPENGYMKCSSDGDNYGATCEFSCIGG
240 250 260 270 280 290
300 310 320 330 340 350
pF1KB5 YDRQGTPSRVCQSSRQWSGSPPICAPMKINVNVNSAAGLLDQFYEKQRLLIISAPDPSNR
:. ::.:.:::::. :::. : :: :..::.: .::.::::::::.::::.:.: :
XP_016 YELQGSPARVCQSNLAWSGTEPTCAAMNVNVGVRTAAALLDQFYEKRRLLIVSTPTARNL
300 310 320 330 340 350
360 370 380 390 400 410
pF1KB5 YYKMQISMLQQSTCGLDLRHVTIIELVGQPPQEVGRIREQQLSANIIEELRQFQRLTRSY
:..:..::::. :::::::.:..:::: : .::: . . . .: .: ::.
XP_016 LYRLQLGMLQQAQCGLDLRHITVVELVGVFPTLIGRIGAKIMPPALALQL-SFITLTKLE
360 370 380 390 400 410
420 430 440 450 460
pF1KB5 FNMVLIDKQGIDRDRYMEPVTPEEIFTFIDDYLLSNQELTQRREQRDICE
XP_016 PWILVSE
>>NP_001164223 (OMIM: 300187) sushi repeat-containing pr (379 aa)
initn: 1248 init1: 1248 opt: 1269 Z-score: 1329.9 bits: 255.1 E(85289): 2.5e-67
Smith-Waterman score: 1269; 47.7% identity (74.3% similar) in 354 aa overlap (13-365:17-363)
10 20 30 40 50
pF1KB5 MASQLTQRGALFLLFFLTPAVTPTW-YAGSGYYPDESYNEVYAEEVPQAPALDYRV
::..: : :. . ::: : :. . :.. :. :.
NP_001 MGSPAHRPALLLLLPPLLLLLLLRVPPSRSFPGSGDSPLEDDEVGYSH--PR-----YKD
10 20 30 40 50
60 70 80 90 100 110
pF1KB5 PRWCYTLNIQDGEATCYSPKGGNYHSSLGTRCELSCDRGFRLIGRRSVQCLPSRRWSGTA
:: .... :.. : .:.:: :...:::::.. :..:..: : . : ..::: .
NP_001 TPWCSPIKVKYGDVYCRAPQGGYYKTALGTRCDIRCQKGYELHGSSLLICQSNKRWSDKV
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB5 YCRQMRCHALPFITSGTYTCTNGVLLDSRCDYSCSSGYHLEGDRSRICMEDGRWSGGEPV
:.: :: .: . ..: . :..:. ..:::.: :: :: :.:.:. ::.. :::
NP_001 ICKQKRCPTLAMPANGGFKCVDGAYFNSRCEYYCSPGYTLKGERTVTCMDNKAWSGRPAS
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB5 CVDIDPPKIRCPHSREKMAEPEKLTARVYWDPPLVKDSADGTITRVTLRGPEPGSHFPEG
:::..::.:.:: .:..:::.:::.:: :. : .:.::: .: : :.: :::.::::
NP_001 CVDMEPPRIKCPSVKERIAEPNKLTVRVSWETPEGRDTADGILTDVILKGLPPGSNFPEG
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB5 EHVIRYTAYDRAYNRASCKFIVKVQVRRCPTLKPPQHGYLTCTSAGDNYGATCEYHCDGG
.: :.::.:::: :...::: :::.:.:: :. :..::. :.: :::::::::. : ::
NP_001 DHKIQYTVYDRAENKGTCKFRVKVRVKRCGKLNAPENGYMKCSSDGDNYGATCEFSCIGG
240 250 260 270 280 290
300 310 320 330 340 350
pF1KB5 YDRQGTPSRVCQSSRQWSGSPPICAPMKINVNVNSAAGLLDQFYEKQRLLIISAPDPSNR
:. ::.:.:::::. :::. : :: :..::.: .::.::::::::.::::.:.: :
NP_001 YELQGSPARVCQSNLAWSGTEPTCAAMNVNVGVRTAAALLDQFYEKRRLLIVSTPTARNL
300 310 320 330 340 350
360 370 380 390 400 410
pF1KB5 YYKMQISMLQQSTCGLDLRHVTIIELVGQPPQEVGRIREQQLSANIIEELRQFQRLTRSY
:..:..:::
NP_001 LYRLQLGMLQAVAANPTLLLQYGASG
360 370
>>NP_001164222 (OMIM: 300187) sushi repeat-containing pr (405 aa)
initn: 1425 init1: 1093 opt: 1209 Z-score: 1266.9 bits: 243.5 E(85289): 7.9e-64
Smith-Waterman score: 1221; 47.8% identity (72.2% similar) in 360 aa overlap (105-464:57-403)
80 90 100 110 120 130
pF1KB5 KGGNYHSSLGTRCELSCDRGFRLIGRRSVQCLPSRRWSGTAYCRQMRCHALPFITSGTYT
: : . : .::: : .: :
NP_001 PSRSFPGSGDSPLEDDEVGYSHPRYKDTPWCSPIKVKYGDVYCRA------P---QGGYY
30 40 50 60 70
140 150 160 170 180 190
pF1KB5 CTNGVLLDSRCDYSCSSGYHLEGDRSRICMEDGRWSGGEPVCVDIDPPKIRCPHSREKMA
: : .::: :..::.:.:. ::. . ::: . .: ..::.:.:: .:..:
NP_001 KTA---LGTRCDIRCQKGYELHGSSLLICQSNKRWSD-KVICKHMEPPRIKCPSVKERIA
80 90 100 110 120 130
200 210 220 230 240 250
pF1KB5 EPEKLTARVYWDPPLVKDSADGTITRVTLRGPEPGSHFPEGEHVIRYTAYDRAYNRASCK
::.:::.:: :. : .:.::: .: : :.: :::.::::.: :.::.:::: :...::
NP_001 EPNKLTVRVSWETPEGRDTADGILTDVILKGLPPGSNFPEGDHKIQYTVYDRAENKGTCK
140 150 160 170 180 190
260 270 280 290 300 310
pF1KB5 FIVKVQVRRCPTLKPPQHGYLTCTSAGDNYGATCEYHCDGGYDRQGTPSRVCQSSRQWSG
: :::.:.:: :. :..::. :.: :::::::::. : :::. ::.:.:::::. :::
NP_001 FRVKVRVKRCGKLNAPENGYMKCSSDGDNYGATCEFSCIGGYELQGSPARVCQSNLAWSG
200 210 220 230 240 250
320 330 340 350 360 370
pF1KB5 SPPICAPMKINVNVNSAAGLLDQFYEKQRLLIISAPDPSNRYYKMQISMLQQSTCGLDLR
. : :: :..::.: .::.::::::::.::::.:.: : :..:..::::. ::::::
NP_001 TEPTCAAMNVNVGVRTAAALLDQFYEKRRLLIVSTPTARNLLYRLQLGMLQQAQCGLDLR
260 270 280 290 300 310
380 390 400 410 420 430
pF1KB5 HVTIIELVGQPPQEVGRIREQQLSANIIEELRQFQRLTRSYFNMVLIDKQGIDRDRYMEP
:.:..:::: : .::: . . . .:: . :. :.:::.::.:.:..::.
NP_001 HITVVELVGVFPTLIGRIGAKIMPPALALQLRLLLRIPLYSFSMVLVDKHGMDKERYVSL
320 330 340 350 360 370
440 450 460
pF1KB5 VTPEEIFTFIDDYLLSNQELTQRREQRDICE
: : .:..:: . : ..:.. . :. . :
NP_001 VMPVALFNLIDTFPLRKEEMVLQAEMSQTCNT
380 390 400
>>NP_000441 (OMIM: 131210,145500) E-selectin precursor [ (610 aa)
initn: 167 init1: 115 opt: 247 Z-score: 261.8 bits: 58.1 E(85289): 7.7e-08
Smith-Waterman score: 345; 26.1% identity (53.2% similar) in 280 aa overlap (65-334:311-566)
40 50 60 70 80 90
pF1KB5 ESYNEVYAEEVPQAPALDYRVPRWCYTLNIQDGEATC-YSPKGGNYHSSLGTRCELSCDR
:.: . : .:: : . .. . :...:..
NP_000 AQSLQCTSSGNWDNEKPTCKAVTCRAVRQPQNGSVRCSHSPAG---EFTFKSSCNFTCEE
290 300 310 320 330
100 110 120 130 140
pF1KB5 GFRLIGRRSVQCLPSRRWSGTA-YCRQMRCHALPFITSGTYTC---TNGVL-LDSRCDYS
:: : : .:.: . .:. :. ..: :: : ..: ..: . : :..:
NP_000 GFMLQGPAQVECTTQGQWTQQIPVCEAFQCTALSNPERGYMNCLPSASGSFRYGSSCEFS
340 350 360 370 380 390
150 160 170 180 190 200
pF1KB5 CSSGYHLEGDRSRICMEDGRWSGGEPVCVDIDPPKIRCPHSREKMAEPEKLTARVYWDPP
: .:. :.:.. : :.:.. .:.: .:: . . .: : .: .:
NP_000 CEQGFVLKGSKRLQCGPTGEWDNEKPTC-----EAVRC----DAVHQPPKGLVRCAHSP-
400 410 420 430 440
210 220 230 240 250 260
pF1KB5 LVKDSADGTITRVTLRGPEPGSHFPEGEHVIRYTAYDRAYNRASCKFIVKVQVRRCPTLK
: . : .. : :: .. : . . . . . . :: .: .:
NP_000 ---------IGEFTYKSSCAFS-CEEGFELHGSTQLECTSQGQWTEEVPSCQVVKCSSLA
450 460 470 480 490
270 280 290 300 310 320
pF1KB5 PPQHGYLTCTSAGDNYGATCEYHCDGGYDRQGTPSRVCQSSRQWSGSPPIC-APMKINVN
: . ..: :. .:..:.. : :. .:. .:.: .. .::: : : :: . :.
NP_000 VPGKINMSC-SGEPVFGTVCKFACPEGWTLNGSAARTCGATGHWSGLLPTCEAPTESNIP
500 510 520 530 540 550
330 340 350 360 370 380
pF1KB5 VN---SAAGLLDQFYEKQRLLIISAPDPSNRYYKMQISMLQQSTCGLDLRHVTIIELVGQ
. :::::
NP_000 LVAGLSAAGLSLLTLAPFLLWLRKCLRKAKKFVPASSCQSLESDGSYQKPSYIL
560 570 580 590 600 610
>--
initn: 167 init1: 99 opt: 231 Z-score: 245.1 bits: 55.0 E(85289): 6.5e-07
Smith-Waterman score: 231; 27.2% identity (51.7% similar) in 180 aa overlap (13-187:135-310)
10 20 30 40
pF1KB5 MASQLTQRGALFLLFFLTPAVTPTWYAGSGYYPDESYNEVYA
: . : : : : .: : :. :.
NP_000 RQKDEDCVEIYIKREKDVGMWNDERCSKKKLALCYTAACTNTSCSGHGECV-ETINNYTC
110 120 130 140 150 160
50 60 70 80 90 100
pF1KB5 EEVPQAPALDYRVPRWCYTL-NIQDGEATCYSPKGGNYHSSLGTRCELSCDRGFRLIGRR
. : .: . : .: . . : .: : : :. : .. : .:::::. . .
NP_000 KCDPGFSGLKCEQIVNCTALESPEHGSLVCSHPLG-NF--SYNSSCSISCDRGYLPSSME
170 180 190 200 210 220
110 120 130 140 150
pF1KB5 SVQCLPSRRWSGTA-YCRQMRCHALPFITSGTYTCTN--GVL-LDSRCDYSCSSGYHLEG
..::. : .::. : ..: :. ..: : . : . .. : ..: :..: :
NP_000 TMQCMSSGEWSAPIPACNVVECDAVTNPANGFVECFQNPGSFPWNTTCTFDCEEGFELMG
230 240 250 260 270 280
160 170 180 190 200 210
pF1KB5 DRSRICMEDGRWSGGEPVCVDIDPPKIRCPHSREKMAEPEKLTARVYWDPPLVKDSADGT
.: : .: :.. .:.: . .: :
NP_000 AQSLQCTSSGNWDNEKPTCKAVTCRAVRQPQNGSVRCSHSPAGEFTFKSSCNFTCEEGFM
290 300 310 320 330 340
>>NP_000646 (OMIM: 153240) L-selectin precursor [Homo sa (385 aa)
initn: 180 init1: 102 opt: 227 Z-score: 243.7 bits: 54.1 E(85289): 7.8e-07
Smith-Waterman score: 227; 29.9% identity (54.3% similar) in 127 aa overlap (59-180:210-333)
30 40 50 60 70 80
pF1KB5 SGYYPDESYNEVYAEEVPQAPALDYRVPRWCYTLNIQD-GEATCYSPKGGNYHSSLGTRC
: :. . : : : : :. :....:
NP_000 GHGECVEIINNYTCNCDVGYYGPQCQFVIQCEPLEAPELGTMDCTHPLG-NF--SFSSQC
180 190 200 210 220 230
90 100 110 120 130 140
pF1KB5 ELSCDRGFRLIGRRSVQCLPSRRWSGTA-YCRQMRCHALPFITSGTYTCTNGVL---LDS
.::..: : : . . : : ::. :. ..:. : : ..:.. . . :
NP_000 AFSCSEGTNLTGIEETTCGPFGNWSSPEPTCQVIQCEPLSAPDLGIMNCSHPLASFSFTS
240 250 260 270 280 290
150 160 170 180 190 200
pF1KB5 RCDYSCSSGYHLEGDRSRICMEDGRWSGGEPVCVDIDPPKIRCPHSREKMAEPEKLTARV
: . :: : .: : .. :: .: ::. :.: .:
NP_000 ACTFICSEGTELIGKKKTICESSGIWSNPSPICQKLDKSFSMIKEGDYNPLFIPVAVMVT
300 310 320 330 340 350
210 220 230 240 250 260
pF1KB5 YWDPPLVKDSADGTITRVTLRGPEPGSHFPEGEHVIRYTAYDRAYNRASCKFIVKVQVRR
NP_000 AFSGLAFIIWLARRLKKGKKSKRSMNDPY
360 370 380
>>XP_011533056 (OMIM: 608397) PREDICTED: CUB and sushi d (2238 aa)
initn: 363 init1: 148 opt: 229 Z-score: 235.1 bits: 55.1 E(85289): 2.3e-06
Smith-Waterman score: 288; 25.4% identity (45.5% similar) in 354 aa overlap (25-319:1244-1586)
10 20 30 40 50
pF1KB5 MASQLTQRGALFLLFFLTPAVTPTWYAGSGYYPDESYNEVYAEEVPQAPALDYR
: :: : :: :. .: . . :
XP_011 DGLWSNKGKPPTCKPVACPSIEAQLSEHVIWRLVSG-----SLNE-YGAQVLLSCSPGYY
1220 1230 1240 1250 1260
60 70 80 90
pF1KB5 VPRW----CY---TLNIQDGEATCYS--------PKGGNYHSSL---GTRCELSCDRGFR
. : : : :: : . .: : .:: ..: :. ..:. :.
XP_011 LEGWRLLRCQANGTWNIGDERPSCRVISCGSLSFPPNGNKIGTLTVYGATAIFTCNTGYT
1270 1280 1290 1300 1310 1320
100 110 120 130 140 150
pF1KB5 LIGRRSVQCLPSRRWSGT-AYCRQMRCHALPFITSGTYTCTNGVLLDSRCDYSCSSGYHL
:.: . .:: . :::. . : .: . :..: . .: . :.:. :..:
XP_011 LVGSHVRECLANGLWSGSETRCLAGHCGSPDPIVNG-HISGDGFSYRDTVVYQCNPGFRL
1330 1340 1350 1360 1370 1380
160 170 180 190 200
pF1KB5 EGDRSRICMEDGRWSGGEPVCVDI------DPPKIRCPHSREKMAEPEKLTARV------
: :::..: .::: :::: : .: . :. .. . ..: .
XP_011 VGTSVRICLQDHKWSGQTPVCVPITCGHPGNPAHGFTNGSEFNLNDVVNFTCNTGYLLQG
1390 1400 1410 1420 1430 1440
210 220 230
pF1KB5 ----------YWDPPL-----VKDSADGTITRVTLRGPE--PGS---------HFPEGEH
:. :: :. : : . . .: . : : : .: .
XP_011 VSRAQCRSNGQWSSPLPTCRVVNCSDPGFVENAIRHGQQNFPESFEYGMSILYHCKKGFY
1450 1460 1470 1480 1490 1500
240 250 260 270 280 290
pF1KB5 VIRYTAYDRAYNRASCKFIVKVQVRRCPTLKPPQHGYLTCTSAGD--NYGATCEYHCDGG
.. .: : . . : . : : .. :: :. .:::. .: : :.
XP_011 LLGSSALTCMANGLWDRSLPKCLAISCGHPGVPANAVLT----GELFTYGAVVHYSCRGS
1510 1520 1530 1540 1550 1560
300 310 320 330 340 350
pF1KB5 YDRQGTPSRVCQSSRQWSGSPPICAPMKINVNVNSAAGLLDQFYEKQRLLIISAPDPSNR
. :. .:::: . .:::. : :
XP_011 ESLIGNDTRVCQEDSHWSGALPHCTGNNPGFCGDPGTPAHGSRLGDDFKTKSLLRFSCEM
1570 1580 1590 1600 1610 1620
>>XP_011533055 (OMIM: 608397) PREDICTED: CUB and sushi d (2595 aa)
initn: 375 init1: 148 opt: 229 Z-score: 234.3 bits: 55.1 E(85289): 2.6e-06
Smith-Waterman score: 288; 25.4% identity (45.5% similar) in 354 aa overlap (25-319:1601-1943)
10 20 30 40 50
pF1KB5 MASQLTQRGALFLLFFLTPAVTPTWYAGSGYYPDESYNEVYAEEVPQAPALDYR
: :: : :: :. .: . . :
XP_011 DGLWSNKGKPPTCKPVACPSIEAQLSEHVIWRLVSG-----SLNE-YGAQVLLSCSPGYY
1580 1590 1600 1610 1620
60 70 80 90
pF1KB5 VPRW----CY---TLNIQDGEATCYS--------PKGGNYHSSL---GTRCELSCDRGFR
. : : : :: : . .: : .:: ..: :. ..:. :.
XP_011 LEGWRLLRCQANGTWNIGDERPSCRVISCGSLSFPPNGNKIGTLTVYGATAIFTCNTGYT
1630 1640 1650 1660 1670 1680
100 110 120 130 140 150
pF1KB5 LIGRRSVQCLPSRRWSGT-AYCRQMRCHALPFITSGTYTCTNGVLLDSRCDYSCSSGYHL
:.: . .:: . :::. . : .: . :..: . .: . :.:. :..:
XP_011 LVGSHVRECLANGLWSGSETRCLAGHCGSPDPIVNG-HISGDGFSYRDTVVYQCNPGFRL
1690 1700 1710 1720 1730 1740
160 170 180 190 200
pF1KB5 EGDRSRICMEDGRWSGGEPVCVDI------DPPKIRCPHSREKMAEPEKLTARV------
: :::..: .::: :::: : .: . :. .. . ..: .
XP_011 VGTSVRICLQDHKWSGQTPVCVPITCGHPGNPAHGFTNGSEFNLNDVVNFTCNTGYLLQG
1750 1760 1770 1780 1790 1800
210 220 230
pF1KB5 ----------YWDPPL-----VKDSADGTITRVTLRGPE--PGS---------HFPEGEH
:. :: :. : : . . .: . : : : .: .
XP_011 VSRAQCRSNGQWSSPLPTCRVVNCSDPGFVENAIRHGQQNFPESFEYGMSILYHCKKGFY
1810 1820 1830 1840 1850 1860
240 250 260 270 280 290
pF1KB5 VIRYTAYDRAYNRASCKFIVKVQVRRCPTLKPPQHGYLTCTSAGD--NYGATCEYHCDGG
.. .: : . . : . : : .. :: :. .:::. .: : :.
XP_011 LLGSSALTCMANGLWDRSLPKCLAISCGHPGVPANAVLT----GELFTYGAVVHYSCRGS
1870 1880 1890 1900 1910
300 310 320 330 340 350
pF1KB5 YDRQGTPSRVCQSSRQWSGSPPICAPMKINVNVNSAAGLLDQFYEKQRLLIISAPDPSNR
. :. .:::: . .:::. : :
XP_011 ESLIGNDTRVCQEDSHWSGALPHCTGNNPGFCGDPGTPAHGSRLGDDFKTKSLLRFSCEM
1920 1930 1940 1950 1960 1970
465 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 13:07:50 2016 done: Sat Nov 5 13:07:52 2016
Total Scan time: 8.950 Total Display time: 0.050
Function used was FASTA [36.3.4 Apr, 2011]