Result of FASTA (omim) for
pF1KB5559
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB5559, 245 aa
1>>>pF1KB5559 245 - 245 aa - 245 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.5515+/-0.00046; mu= 18.8899+/- 0.028
mean_var=66.9300+/-13.776, 0's: 0 Z-trim(109.5): 100 B-trim: 0 in 0/49
Lambda= 0.156770
statistics sampled from 17610 (17720) to 17610 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.561), E-opt: 0.2 (0.208), width: 16
Scan time: 6.000
The best scores are: opt bits E(85289)
NP_003261 (OMIM: 300191) tetraspanin-6 isoform a [ ( 245) 1631 377.9 8.8e-105
NP_001265669 (OMIM: 300191) tetraspanin-6 isoform ( 157) 1055 247.5 1.1e-65
XP_011529320 (OMIM: 300191) PREDICTED: tetraspanin ( 157) 1055 247.5 1.1e-65
NP_001265670 (OMIM: 300191) tetraspanin-6 isoform ( 157) 1055 247.5 1.1e-65
NP_004606 (OMIM: 300096,300210) tetraspanin-7 [Hom ( 249) 1019 239.5 4.1e-63
NP_001265671 (OMIM: 300191) tetraspanin-6 isoform ( 137) 917 216.2 2.4e-56
NP_001265672 (OMIM: 300191) tetraspanin-6 isoform ( 129) 732 174.3 9e-44
NP_001254627 (OMIM: 155740) CD63 antigen isoform A ( 238) 445 109.7 4.8e-24
NP_001244318 (OMIM: 155740) CD63 antigen isoform A ( 238) 445 109.7 4.8e-24
NP_001244319 (OMIM: 155740) CD63 antigen isoform A ( 238) 445 109.7 4.8e-24
NP_001771 (OMIM: 155740) CD63 antigen isoform A [H ( 238) 445 109.7 4.8e-24
NP_001244320 (OMIM: 155740) CD63 antigen isoform A ( 238) 445 109.7 4.8e-24
NP_005715 (OMIM: 613134) tetraspanin-3 isoform 1 [ ( 253) 441 108.8 9.4e-24
NP_001244321 (OMIM: 155740) CD63 antigen isoform C ( 215) 405 100.6 2.4e-21
NP_004348 (OMIM: 179620,602243,609057) CD151 antig ( 253) 396 98.6 1.1e-20
NP_620598 (OMIM: 179620,602243,609057) CD151 antig ( 253) 396 98.6 1.1e-20
NP_620599 (OMIM: 179620,602243,609057) CD151 antig ( 253) 396 98.6 1.1e-20
NP_001034579 (OMIM: 179620,602243,609057) CD151 an ( 253) 396 98.6 1.1e-20
NP_005718 (OMIM: 613170) tetraspanin-1 [Homo sapie ( 241) 363 91.1 1.9e-18
NP_001161792 (OMIM: 613137) tetraspanin-9 [Homo sa ( 239) 361 90.7 2.5e-18
NP_006666 (OMIM: 613137) tetraspanin-9 [Homo sapie ( 239) 361 90.7 2.5e-18
NP_004607 (OMIM: 600769) tetraspanin-8 [Homo sapie ( 237) 355 89.3 6.4e-18
XP_016875402 (OMIM: 600769) PREDICTED: tetraspanin ( 237) 355 89.3 6.4e-18
XP_006719646 (OMIM: 600769) PREDICTED: tetraspanin ( 237) 355 89.3 6.4e-18
XP_011538762 (OMIM: 613170) PREDICTED: tetraspanin ( 258) 354 89.1 8e-18
XP_016877346 (OMIM: 613134) PREDICTED: tetraspanin ( 214) 350 88.1 1.3e-17
NP_001244329 (OMIM: 155740) CD63 antigen isoform D ( 156) 336 84.8 9.4e-17
NP_001244330 (OMIM: 155740) CD63 antigen isoform D ( 156) 336 84.8 9.4e-17
NP_036471 (OMIM: 613140) tetraspanin-15 [Homo sapi ( 294) 338 85.6 1.1e-16
NP_005714 (OMIM: 613136) tetraspanin-5 [Homo sapie ( 268) 320 81.4 1.7e-15
NP_001020407 (OMIM: 602644) tetraspanin-4 isoform ( 238) 310 79.1 7.5e-15
NP_001020406 (OMIM: 602644) tetraspanin-4 isoform ( 238) 310 79.1 7.5e-15
NP_001020405 (OMIM: 602644) tetraspanin-4 isoform ( 238) 310 79.1 7.5e-15
NP_001020409 (OMIM: 602644) tetraspanin-4 isoform ( 238) 310 79.1 7.5e-15
XP_005253159 (OMIM: 602644) PREDICTED: tetraspanin ( 238) 310 79.1 7.5e-15
NP_001020408 (OMIM: 602644) tetraspanin-4 isoform ( 238) 310 79.1 7.5e-15
NP_003262 (OMIM: 602644) tetraspanin-4 isoform a [ ( 238) 310 79.1 7.5e-15
NP_001161884 (OMIM: 613134) tetraspanin-3 isoform ( 189) 302 77.2 2.2e-14
NP_848657 (OMIM: 610120) tetraspanin-33 [Homo sapi ( 283) 302 77.4 3e-14
XP_006716023 (OMIM: 610120) PREDICTED: tetraspanin ( 282) 301 77.2 3.5e-14
NP_004347 (OMIM: 186845,613496) CD81 antigen isofo ( 236) 275 71.2 1.8e-12
XP_011518638 (OMIM: 602644) PREDICTED: tetraspanin ( 269) 271 70.4 3.7e-12
NP_000551 (OMIM: 151525) leukocyte surface antigen ( 219) 270 70.1 3.7e-12
NP_001035122 (OMIM: 151525) leukocyte surface anti ( 219) 270 70.1 3.7e-12
NP_001760 (OMIM: 143030) CD9 antigen isoform 1 [Ho ( 228) 266 69.2 7.2e-12
NP_001020015 (OMIM: 176807,600623) CD82 antigen is ( 242) 248 65.1 1.3e-10
XP_011519215 (OMIM: 613137) PREDICTED: tetraspanin ( 175) 233 61.6 1e-09
XP_011519214 (OMIM: 613137) PREDICTED: tetraspanin ( 175) 233 61.6 1e-09
XP_005253871 (OMIM: 143030) PREDICTED: CD9 antigen ( 249) 230 61.1 2.2e-09
NP_944492 (OMIM: 613134) tetraspanin-3 isoform 2 [ ( 228) 229 60.8 2.4e-09
>>NP_003261 (OMIM: 300191) tetraspanin-6 isoform a [Homo (245 aa)
initn: 1631 init1: 1631 opt: 1631 Z-score: 2002.2 bits: 377.9 E(85289): 8.8e-105
Smith-Waterman score: 1631; 99.6% identity (100.0% similar) in 245 aa overlap (1-245:1-245)
10 20 30 40 50 60
pF1KB5 MASPSRRLQTKPVITCFKSVLLIYTFIFWITGVILLAVGIWGKVSLENYFSLLNEKATNV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 MASPSRRLQTKPVITCFKSVLLIYTFIFWITGVILLAVGIWGKVSLENYFSLLNEKATNV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 PFVLIATGTVIILLGTFGCFATCRASAWMLKLYAMFLTLVFLVELVATIVGFVFRHEIKN
:::::::::::::::::::::::::::::::::::::::::::::::.::::::::::::
NP_003 PFVLIATGTVIILLGTFGCFATCRASAWMLKLYAMFLTLVFLVELVAAIVGFVFRHEIKN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 SFKNNYEKALKQYNSTGDYRSHAVDKIQNTLHCCGVTDYRDWTDTNYYSEKGFPKSCCKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 SFKNNYEKALKQYNSTGDYRSHAVDKIQNTLHCCGVTDYRDWTDTNYYSEKGFPKSCCKL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 EDCTPQRDADKVNNEGCFIKVMTIIESEMGVVAGISFGVACFQLIGIFLAYCLSRAITNN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 EDCTPQRDADKVNNEGCFIKVMTIIESEMGVVAGISFGVACFQLIGIFLAYCLSRAITNN
190 200 210 220 230 240
pF1KB5 QYEIV
:::::
NP_003 QYEIV
>>NP_001265669 (OMIM: 300191) tetraspanin-6 isoform b pr (157 aa)
initn: 1055 init1: 1055 opt: 1055 Z-score: 1300.6 bits: 247.5 E(85289): 1.1e-65
Smith-Waterman score: 1055; 99.4% identity (100.0% similar) in 157 aa overlap (89-245:1-157)
60 70 80 90 100 110
pF1KB5 NVPFVLIATGTVIILLGTFGCFATCRASAWMLKLYAMFLTLVFLVELVATIVGFVFRHEI
:::::::::::::::::::.::::::::::
NP_001 MLKLYAMFLTLVFLVELVAAIVGFVFRHEI
10 20 30
120 130 140 150 160 170
pF1KB5 KNSFKNNYEKALKQYNSTGDYRSHAVDKIQNTLHCCGVTDYRDWTDTNYYSEKGFPKSCC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KNSFKNNYEKALKQYNSTGDYRSHAVDKIQNTLHCCGVTDYRDWTDTNYYSEKGFPKSCC
40 50 60 70 80 90
180 190 200 210 220 230
pF1KB5 KLEDCTPQRDADKVNNEGCFIKVMTIIESEMGVVAGISFGVACFQLIGIFLAYCLSRAIT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KLEDCTPQRDADKVNNEGCFIKVMTIIESEMGVVAGISFGVACFQLIGIFLAYCLSRAIT
100 110 120 130 140 150
240
pF1KB5 NNQYEIV
:::::::
NP_001 NNQYEIV
>>XP_011529320 (OMIM: 300191) PREDICTED: tetraspanin-6 i (157 aa)
initn: 1055 init1: 1055 opt: 1055 Z-score: 1300.6 bits: 247.5 E(85289): 1.1e-65
Smith-Waterman score: 1055; 99.4% identity (100.0% similar) in 157 aa overlap (89-245:1-157)
60 70 80 90 100 110
pF1KB5 NVPFVLIATGTVIILLGTFGCFATCRASAWMLKLYAMFLTLVFLVELVATIVGFVFRHEI
:::::::::::::::::::.::::::::::
XP_011 MLKLYAMFLTLVFLVELVAAIVGFVFRHEI
10 20 30
120 130 140 150 160 170
pF1KB5 KNSFKNNYEKALKQYNSTGDYRSHAVDKIQNTLHCCGVTDYRDWTDTNYYSEKGFPKSCC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KNSFKNNYEKALKQYNSTGDYRSHAVDKIQNTLHCCGVTDYRDWTDTNYYSEKGFPKSCC
40 50 60 70 80 90
180 190 200 210 220 230
pF1KB5 KLEDCTPQRDADKVNNEGCFIKVMTIIESEMGVVAGISFGVACFQLIGIFLAYCLSRAIT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KLEDCTPQRDADKVNNEGCFIKVMTIIESEMGVVAGISFGVACFQLIGIFLAYCLSRAIT
100 110 120 130 140 150
240
pF1KB5 NNQYEIV
:::::::
XP_011 NNQYEIV
>>NP_001265670 (OMIM: 300191) tetraspanin-6 isoform b pr (157 aa)
initn: 1055 init1: 1055 opt: 1055 Z-score: 1300.6 bits: 247.5 E(85289): 1.1e-65
Smith-Waterman score: 1055; 99.4% identity (100.0% similar) in 157 aa overlap (89-245:1-157)
60 70 80 90 100 110
pF1KB5 NVPFVLIATGTVIILLGTFGCFATCRASAWMLKLYAMFLTLVFLVELVATIVGFVFRHEI
:::::::::::::::::::.::::::::::
NP_001 MLKLYAMFLTLVFLVELVAAIVGFVFRHEI
10 20 30
120 130 140 150 160 170
pF1KB5 KNSFKNNYEKALKQYNSTGDYRSHAVDKIQNTLHCCGVTDYRDWTDTNYYSEKGFPKSCC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KNSFKNNYEKALKQYNSTGDYRSHAVDKIQNTLHCCGVTDYRDWTDTNYYSEKGFPKSCC
40 50 60 70 80 90
180 190 200 210 220 230
pF1KB5 KLEDCTPQRDADKVNNEGCFIKVMTIIESEMGVVAGISFGVACFQLIGIFLAYCLSRAIT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KLEDCTPQRDADKVNNEGCFIKVMTIIESEMGVVAGISFGVACFQLIGIFLAYCLSRAIT
100 110 120 130 140 150
240
pF1KB5 NNQYEIV
:::::::
NP_001 NNQYEIV
>>NP_004606 (OMIM: 300096,300210) tetraspanin-7 [Homo sa (249 aa)
initn: 849 init1: 643 opt: 1019 Z-score: 1254.0 bits: 239.5 E(85289): 4.1e-63
Smith-Waterman score: 1019; 58.9% identity (83.5% similar) in 248 aa overlap (5-245:3-249)
10 20 30 40 50 60
pF1KB5 MASPSRRLQTKPVITCFKSVLLIYTFIFWITGVILLAVGIWGKVSLENYFSLLNEKATNV
:::..:::::::.:..:.::.:.::::::::::::.:::..: .:.::. :..::.
NP_004 MASRRMETKPVITCLKTLLIIYSFVFWITGVILLAVGVWGKLTLGTYISLIAENSTNA
10 20 30 40 50
70 80 90 100 110 120
pF1KB5 PFVLIATGTVIILLGTFGCFATCRASAWMLKLYAMFLTLVFLVELVATIVGFVFRHEIKN
:.:::.:::.:...: ::::::::.: ::::::::::.::::.:::: : :::::::::.
NP_004 PYVLIGTGTTIVVFGLFGCFATCRGSPWMLKLYAMFLSLVFLAELVAGISGFVFRHEIKD
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB5 SFKNNYEKALKQYNSTGDYRSHAVDKIQNTLHCCGVTDYRDWTDTNYYSEKGFPKSCCKL
.: .: :.. ::.. : ::.:::..: .: :::: .: .:. . :. :.:.: :::
NP_004 TFLRTYTDAMQTYNGN-DERSRAVDHVQRSLSCCGVQNYTNWSTSPYFLEHGIPPSCCMN
120 130 140 150 160 170
190 200 210 220 230
pF1KB5 E-DCTPQR------DADKVNNEGCFIKVMTIIESEMGVVAGISFGVACFQLIGIFLAYCL
: ::.:: : :::..::. : ...:..::..::..::.: ::::..:: ::
NP_004 ETDCNPQDLHNLTVAATKVNQKGCYDLVTSFMETNMGIIAGVAFGIAFSQLIGMLLACCL
180 190 200 210 220 230
240
pF1KB5 SRAITNNQYEIV
:: :: ::::.:
NP_004 SRFITANQYEMV
240
>>NP_001265671 (OMIM: 300191) tetraspanin-6 isoform c pr (137 aa)
initn: 945 init1: 917 opt: 917 Z-score: 1132.7 bits: 216.2 E(85289): 2.4e-56
Smith-Waterman score: 917; 98.5% identity (99.3% similar) in 137 aa overlap (89-225:1-137)
60 70 80 90 100 110
pF1KB5 NVPFVLIATGTVIILLGTFGCFATCRASAWMLKLYAMFLTLVFLVELVATIVGFVFRHEI
:::::::::::::::::::.::::::::::
NP_001 MLKLYAMFLTLVFLVELVAAIVGFVFRHEI
10 20 30
120 130 140 150 160 170
pF1KB5 KNSFKNNYEKALKQYNSTGDYRSHAVDKIQNTLHCCGVTDYRDWTDTNYYSEKGFPKSCC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KNSFKNNYEKALKQYNSTGDYRSHAVDKIQNTLHCCGVTDYRDWTDTNYYSEKGFPKSCC
40 50 60 70 80 90
180 190 200 210 220 230
pF1KB5 KLEDCTPQRDADKVNNEGCFIKVMTIIESEMGVVAGISFGVACFQLIGIFLAYCLSRAIT
::::::::::::::::::::::::::::::::::::::::::::: :
NP_001 KLEDCTPQRDADKVNNEGCFIKVMTIIESEMGVVAGISFGVACFQDI
100 110 120 130
240
pF1KB5 NNQYEIV
>>NP_001265672 (OMIM: 300191) tetraspanin-6 isoform d pr (129 aa)
initn: 730 init1: 730 opt: 732 Z-score: 906.9 bits: 174.3 E(85289): 9e-44
Smith-Waterman score: 803; 81.5% identity (82.2% similar) in 157 aa overlap (89-245:1-129)
60 70 80 90 100 110
pF1KB5 NVPFVLIATGTVIILLGTFGCFATCRASAWMLKLYAMFLTLVFLVELVATIVGFVFRHEI
:::::::::::::::::::.::::::::::
NP_001 MLKLYAMFLTLVFLVELVAAIVGFVFRHEI
10 20 30
120 130 140 150 160 170
pF1KB5 KNSFKNNYEKALKQYNSTGDYRSHAVDKIQNTLHCCGVTDYRDWTDTNYYSEKGFPKSCC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KNSFKNNYEKALKQYNSTGDYRSHAVDKIQNTLHCCGVTDYRDWTDTNYYSEKGFPKSCC
40 50 60 70 80 90
180 190 200 210 220 230
pF1KB5 KLEDCTPQRDADKVNNEGCFIKVMTIIESEMGVVAGISFGVACFQLIGIFLAYCLSRAIT
::::::::::::::::: :::::::::::::::
NP_001 KLEDCTPQRDADKVNNE----------------------------LIGIFLAYCLSRAIT
100 110 120
240
pF1KB5 NNQYEIV
:::::::
NP_001 NNQYEIV
>>NP_001254627 (OMIM: 155740) CD63 antigen isoform A [Ho (238 aa)
initn: 304 init1: 220 opt: 445 Z-score: 552.7 bits: 109.7 E(85289): 4.8e-24
Smith-Waterman score: 445; 28.6% identity (66.7% similar) in 234 aa overlap (14-245:7-238)
10 20 30 40 50 60
pF1KB5 MASPSRRLQTKPVITCFKSVLLIYTFIFWITGVILLAVGIWGKVSLENYFSLLNEKATNV
. : : .: . . : .: :.:::. ... : . . .. .
NP_001 MAVEGGMKCVKFLLYVLLLAFCACAVGLIAVGVGAQLVLSQTIIQGATPGSLL
10 20 30 40 50
70 80 90 100 110 120
pF1KB5 PFVLIATGTVIILLGTFGCFATCRASAWMLKLYAMFLTLVFLVELVATIVGFVFRHEIKN
: :.::.:. ..:.. :: ..:. . .. .:.::.:..:::..:.:.:.::: .. .
NP_001 PVVIIAVGVFLFLVAFVGCCGACKENYCLMITFAIFLSLIMLVEVAAAIAGYVFRDKVMS
60 70 80 90 100 110
130 140 150 160 170
pF1KB5 SFKNNYEKALKQYNSTGDYRSHAVDKIQNTLHCCGVTDYRDWTDTNYYSEKGFPKSCCK-
:.::... ...: .. .. . .:..: ..:::...: :: .:.. : :::
NP_001 EFNNNFRQQMENYPKN-NHTASILDRMQADFKCCGAANYTDWEKIPSMSKNRVPDSCCIN
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB5 -LEDCTPQRDADKVNNEGCFIKVMTIIESEMGVVAGISFGVACFQLIGIFLAYCLSRAIT
: . . ...::: :. ..... :::. ..:.: ...:: .: :: ..:
NP_001 VTVGCGINFNEKAIHKEGCVEKIGGWLRKNVLVVAAAALGIAFVEVLGIVFACCLVKSIR
180 190 200 210 220 230
240
pF1KB5 NNQYEIV
.. ::..
NP_001 SG-YEVM
>>NP_001244318 (OMIM: 155740) CD63 antigen isoform A [Ho (238 aa)
initn: 304 init1: 220 opt: 445 Z-score: 552.7 bits: 109.7 E(85289): 4.8e-24
Smith-Waterman score: 445; 28.6% identity (66.7% similar) in 234 aa overlap (14-245:7-238)
10 20 30 40 50 60
pF1KB5 MASPSRRLQTKPVITCFKSVLLIYTFIFWITGVILLAVGIWGKVSLENYFSLLNEKATNV
. : : .: . . : .: :.:::. ... : . . .. .
NP_001 MAVEGGMKCVKFLLYVLLLAFCACAVGLIAVGVGAQLVLSQTIIQGATPGSLL
10 20 30 40 50
70 80 90 100 110 120
pF1KB5 PFVLIATGTVIILLGTFGCFATCRASAWMLKLYAMFLTLVFLVELVATIVGFVFRHEIKN
: :.::.:. ..:.. :: ..:. . .. .:.::.:..:::..:.:.:.::: .. .
NP_001 PVVIIAVGVFLFLVAFVGCCGACKENYCLMITFAIFLSLIMLVEVAAAIAGYVFRDKVMS
60 70 80 90 100 110
130 140 150 160 170
pF1KB5 SFKNNYEKALKQYNSTGDYRSHAVDKIQNTLHCCGVTDYRDWTDTNYYSEKGFPKSCCK-
:.::... ...: .. .. . .:..: ..:::...: :: .:.. : :::
NP_001 EFNNNFRQQMENYPKN-NHTASILDRMQADFKCCGAANYTDWEKIPSMSKNRVPDSCCIN
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB5 -LEDCTPQRDADKVNNEGCFIKVMTIIESEMGVVAGISFGVACFQLIGIFLAYCLSRAIT
: . . ...::: :. ..... :::. ..:.: ...:: .: :: ..:
NP_001 VTVGCGINFNEKAIHKEGCVEKIGGWLRKNVLVVAAAALGIAFVEVLGIVFACCLVKSIR
180 190 200 210 220 230
240
pF1KB5 NNQYEIV
.. ::..
NP_001 SG-YEVM
>>NP_001244319 (OMIM: 155740) CD63 antigen isoform A [Ho (238 aa)
initn: 304 init1: 220 opt: 445 Z-score: 552.7 bits: 109.7 E(85289): 4.8e-24
Smith-Waterman score: 445; 28.6% identity (66.7% similar) in 234 aa overlap (14-245:7-238)
10 20 30 40 50 60
pF1KB5 MASPSRRLQTKPVITCFKSVLLIYTFIFWITGVILLAVGIWGKVSLENYFSLLNEKATNV
. : : .: . . : .: :.:::. ... : . . .. .
NP_001 MAVEGGMKCVKFLLYVLLLAFCACAVGLIAVGVGAQLVLSQTIIQGATPGSLL
10 20 30 40 50
70 80 90 100 110 120
pF1KB5 PFVLIATGTVIILLGTFGCFATCRASAWMLKLYAMFLTLVFLVELVATIVGFVFRHEIKN
: :.::.:. ..:.. :: ..:. . .. .:.::.:..:::..:.:.:.::: .. .
NP_001 PVVIIAVGVFLFLVAFVGCCGACKENYCLMITFAIFLSLIMLVEVAAAIAGYVFRDKVMS
60 70 80 90 100 110
130 140 150 160 170
pF1KB5 SFKNNYEKALKQYNSTGDYRSHAVDKIQNTLHCCGVTDYRDWTDTNYYSEKGFPKSCCK-
:.::... ...: .. .. . .:..: ..:::...: :: .:.. : :::
NP_001 EFNNNFRQQMENYPKN-NHTASILDRMQADFKCCGAANYTDWEKIPSMSKNRVPDSCCIN
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB5 -LEDCTPQRDADKVNNEGCFIKVMTIIESEMGVVAGISFGVACFQLIGIFLAYCLSRAIT
: . . ...::: :. ..... :::. ..:.: ...:: .: :: ..:
NP_001 VTVGCGINFNEKAIHKEGCVEKIGGWLRKNVLVVAAAALGIAFVEVLGIVFACCLVKSIR
180 190 200 210 220 230
240
pF1KB5 NNQYEIV
.. ::..
NP_001 SG-YEVM
245 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 13:07:20 2016 done: Sat Nov 5 13:07:21 2016
Total Scan time: 6.000 Total Display time: -0.020
Function used was FASTA [36.3.4 Apr, 2011]