Result of FASTA (ccds) for
pF1KB5192
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB5192, 461 aa
1>>>pF1KB5192 461 - 461 aa - 461 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.1736+/-0.000903; mu= 17.6927+/- 0.054
mean_var=57.4696+/-11.875, 0's: 0 Z-trim(104.3): 33 B-trim: 0 in 0/49
Lambda= 0.169182
statistics sampled from 7802 (7817) to 7802 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.592), E-opt: 0.2 (0.24), width: 16
Scan time: 2.720
The best scores are: opt bits E(32554)
CCDS14299.1 PORCN gene_id:64840|Hs108|chrX ( 461) 3130 772.5 0
CCDS14297.1 PORCN gene_id:64840|Hs108|chrX ( 456) 3078 759.8 0
CCDS14298.1 PORCN gene_id:64840|Hs108|chrX ( 455) 3067 757.1 8.3e-219
CCDS14296.1 PORCN gene_id:64840|Hs108|chrX ( 450) 1567 391.0 1.3e-108
>>CCDS14299.1 PORCN gene_id:64840|Hs108|chrX (461 aa)
initn: 3130 init1: 3130 opt: 3130 Z-score: 4124.7 bits: 772.5 E(32554): 0
Smith-Waterman score: 3130; 100.0% identity (100.0% similar) in 461 aa overlap (1-461:1-461)
10 20 30 40 50 60
pF1KB5 MATFSRQEFFQQLLQGCLLPTAQQGLDQIWLLLAICLACRLLWRLGLPSYLKHASTVAGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 MATFSRQEFFQQLLQGCLLPTAQQGLDQIWLLLAICLACRLLWRLGLPSYLKHASTVAGG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 FFSLYHFFQLHMVWVVLLSLLCYLVLFLCRHSSHRGVFLSVTILIYLLMGEMHMVDTVTW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 FFSLYHFFQLHMVWVVLLSLLCYLVLFLCRHSSHRGVFLSVTILIYLLMGEMHMVDTVTW
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 HKMRGAQMIVAMKAVSLGFDLDRGEVGTVPSPVEFMGYLYFVGTIVFGPWISFHSYLQAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 HKMRGAQMIVAMKAVSLGFDLDRGEVGTVPSPVEFMGYLYFVGTIVFGPWISFHSYLQAV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 QGRPLSCRWLQKVARSLALALLCLVLSTCVGPYLFPYFIPLNGDRLLRNKKRKARGTMVR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 QGRPLSCRWLQKVARSLALALLCLVLSTCVGPYLFPYFIPLNGDRLLRNKKRKARGTMVR
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 WLRAYESAVSFHFSNYFVGFLSEATATLAGAGFTEEKDHLEWDLTVSKPLNVELPRSMVE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 WLRAYESAVSFHFSNYFVGFLSEATATLAGAGFTEEKDHLEWDLTVSKPLNVELPRSMVE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 VVTSWNLPMSYWLNNYVFKNALRLGTFSAVLVTYAASALLHGFSFHLAAVLLSLAFITYV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 VVTSWNLPMSYWLNNYVFKNALRLGTFSAVLVTYAASALLHGFSFHLAAVLLSLAFITYV
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB5 EHVLRKRLARILSACVLSKRCPPDCSHQHRLGLGVRALNLLFGALAIFHLAYLGSLFDVD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 EHVLRKRLARILSACVLSKRCPPDCSHQHRLGLGVRALNLLFGALAIFHLAYLGSLFDVD
370 380 390 400 410 420
430 440 450 460
pF1KB5 VDDTTEEQGYGMAYTVHKWSELSWASHWVTFGCWIFYRLIG
:::::::::::::::::::::::::::::::::::::::::
CCDS14 VDDTTEEQGYGMAYTVHKWSELSWASHWVTFGCWIFYRLIG
430 440 450 460
>>CCDS14297.1 PORCN gene_id:64840|Hs108|chrX (456 aa)
initn: 1610 init1: 1610 opt: 3078 Z-score: 4056.2 bits: 759.8 E(32554): 0
Smith-Waterman score: 3078; 98.9% identity (98.9% similar) in 461 aa overlap (1-461:1-456)
10 20 30 40 50 60
pF1KB5 MATFSRQEFFQQLLQGCLLPTAQQGLDQIWLLLAICLACRLLWRLGLPSYLKHASTVAGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 MATFSRQEFFQQLLQGCLLPTAQQGLDQIWLLLAICLACRLLWRLGLPSYLKHASTVAGG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 FFSLYHFFQLHMVWVVLLSLLCYLVLFLCRHSSHRGVFLSVTILIYLLMGEMHMVDTVTW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 FFSLYHFFQLHMVWVVLLSLLCYLVLFLCRHSSHRGVFLSVTILIYLLMGEMHMVDTVTW
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 HKMRGAQMIVAMKAVSLGFDLDRGEVGTVPSPVEFMGYLYFVGTIVFGPWISFHSYLQAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 HKMRGAQMIVAMKAVSLGFDLDRGEVGTVPSPVEFMGYLYFVGTIVFGPWISFHSYLQAV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 QGRPLSCRWLQKVARSLALALLCLVLSTCVGPYLFPYFIPLNGDRLLRNKKRKARGTMVR
:::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 QGRPLSCRWLQKVARSLALALLCLVLSTCVGPYLFPYFIPLNGDRLLRNKKRKAR-----
190 200 210 220 230
250 260 270 280 290 300
pF1KB5 WLRAYESAVSFHFSNYFVGFLSEATATLAGAGFTEEKDHLEWDLTVSKPLNVELPRSMVE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 WLRAYESAVSFHFSNYFVGFLSEATATLAGAGFTEEKDHLEWDLTVSKPLNVELPRSMVE
240 250 260 270 280 290
310 320 330 340 350 360
pF1KB5 VVTSWNLPMSYWLNNYVFKNALRLGTFSAVLVTYAASALLHGFSFHLAAVLLSLAFITYV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 VVTSWNLPMSYWLNNYVFKNALRLGTFSAVLVTYAASALLHGFSFHLAAVLLSLAFITYV
300 310 320 330 340 350
370 380 390 400 410 420
pF1KB5 EHVLRKRLARILSACVLSKRCPPDCSHQHRLGLGVRALNLLFGALAIFHLAYLGSLFDVD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 EHVLRKRLARILSACVLSKRCPPDCSHQHRLGLGVRALNLLFGALAIFHLAYLGSLFDVD
360 370 380 390 400 410
430 440 450 460
pF1KB5 VDDTTEEQGYGMAYTVHKWSELSWASHWVTFGCWIFYRLIG
:::::::::::::::::::::::::::::::::::::::::
CCDS14 VDDTTEEQGYGMAYTVHKWSELSWASHWVTFGCWIFYRLIG
420 430 440 450
>>CCDS14298.1 PORCN gene_id:64840|Hs108|chrX (455 aa)
initn: 3075 init1: 1566 opt: 3067 Z-score: 4041.7 bits: 757.1 E(32554): 8.3e-219
Smith-Waterman score: 3067; 98.5% identity (98.7% similar) in 461 aa overlap (1-461:1-455)
10 20 30 40 50 60
pF1KB5 MATFSRQEFFQQLLQGCLLPTAQQGLDQIWLLLAICLACRLLWRLGLPSYLKHASTVAGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 MATFSRQEFFQQLLQGCLLPTAQQGLDQIWLLLAICLACRLLWRLGLPSYLKHASTVAGG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 FFSLYHFFQLHMVWVVLLSLLCYLVLFLCRHSSHRGVFLSVTILIYLLMGEMHMVDTVTW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 FFSLYHFFQLHMVWVVLLSLLCYLVLFLCRHSSHRGVFLSVTILIYLLMGEMHMVDTVTW
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 HKMRGAQMIVAMKAVSLGFDLDRGEVGTVPSPVEFMGYLYFVGTIVFGPWISFHSYLQAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 HKMRGAQMIVAMKAVSLGFDLDRGEVGTVPSPVEFMGYLYFVGTIVFGPWISFHSYLQAV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 QGRPLSCRWLQKVARSLALALLCLVLSTCVGPYLFPYFIPLNGDRLLRNKKRKARGTMVR
:::::::::::::::::::::::::::::::::::::::::::::::: .:::::
CCDS14 QGRPLSCRWLQKVARSLALALLCLVLSTCVGPYLFPYFIPLNGDRLLR------KGTMVR
190 200 210 220 230
250 260 270 280 290 300
pF1KB5 WLRAYESAVSFHFSNYFVGFLSEATATLAGAGFTEEKDHLEWDLTVSKPLNVELPRSMVE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 WLRAYESAVSFHFSNYFVGFLSEATATLAGAGFTEEKDHLEWDLTVSKPLNVELPRSMVE
240 250 260 270 280 290
310 320 330 340 350 360
pF1KB5 VVTSWNLPMSYWLNNYVFKNALRLGTFSAVLVTYAASALLHGFSFHLAAVLLSLAFITYV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 VVTSWNLPMSYWLNNYVFKNALRLGTFSAVLVTYAASALLHGFSFHLAAVLLSLAFITYV
300 310 320 330 340 350
370 380 390 400 410 420
pF1KB5 EHVLRKRLARILSACVLSKRCPPDCSHQHRLGLGVRALNLLFGALAIFHLAYLGSLFDVD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 EHVLRKRLARILSACVLSKRCPPDCSHQHRLGLGVRALNLLFGALAIFHLAYLGSLFDVD
360 370 380 390 400 410
430 440 450 460
pF1KB5 VDDTTEEQGYGMAYTVHKWSELSWASHWVTFGCWIFYRLIG
:::::::::::::::::::::::::::::::::::::::::
CCDS14 VDDTTEEQGYGMAYTVHKWSELSWASHWVTFGCWIFYRLIG
420 430 440 450
>>CCDS14296.1 PORCN gene_id:64840|Hs108|chrX (450 aa)
initn: 3043 init1: 1566 opt: 1567 Z-score: 2063.1 bits: 391.0 E(32554): 1.3e-108
Smith-Waterman score: 3025; 97.4% identity (97.6% similar) in 461 aa overlap (1-461:1-450)
10 20 30 40 50 60
pF1KB5 MATFSRQEFFQQLLQGCLLPTAQQGLDQIWLLLAICLACRLLWRLGLPSYLKHASTVAGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 MATFSRQEFFQQLLQGCLLPTAQQGLDQIWLLLAICLACRLLWRLGLPSYLKHASTVAGG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 FFSLYHFFQLHMVWVVLLSLLCYLVLFLCRHSSHRGVFLSVTILIYLLMGEMHMVDTVTW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 FFSLYHFFQLHMVWVVLLSLLCYLVLFLCRHSSHRGVFLSVTILIYLLMGEMHMVDTVTW
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 HKMRGAQMIVAMKAVSLGFDLDRGEVGTVPSPVEFMGYLYFVGTIVFGPWISFHSYLQAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 HKMRGAQMIVAMKAVSLGFDLDRGEVGTVPSPVEFMGYLYFVGTIVFGPWISFHSYLQAV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 QGRPLSCRWLQKVARSLALALLCLVLSTCVGPYLFPYFIPLNGDRLLRNKKRKARGTMVR
:::::::::::::::::::::::::::::::::::::::::::::::: .
CCDS14 QGRPLSCRWLQKVARSLALALLCLVLSTCVGPYLFPYFIPLNGDRLLR-----------K
190 200 210 220
250 260 270 280 290 300
pF1KB5 WLRAYESAVSFHFSNYFVGFLSEATATLAGAGFTEEKDHLEWDLTVSKPLNVELPRSMVE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 WLRAYESAVSFHFSNYFVGFLSEATATLAGAGFTEEKDHLEWDLTVSKPLNVELPRSMVE
230 240 250 260 270 280
310 320 330 340 350 360
pF1KB5 VVTSWNLPMSYWLNNYVFKNALRLGTFSAVLVTYAASALLHGFSFHLAAVLLSLAFITYV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 VVTSWNLPMSYWLNNYVFKNALRLGTFSAVLVTYAASALLHGFSFHLAAVLLSLAFITYV
290 300 310 320 330 340
370 380 390 400 410 420
pF1KB5 EHVLRKRLARILSACVLSKRCPPDCSHQHRLGLGVRALNLLFGALAIFHLAYLGSLFDVD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 EHVLRKRLARILSACVLSKRCPPDCSHQHRLGLGVRALNLLFGALAIFHLAYLGSLFDVD
350 360 370 380 390 400
430 440 450 460
pF1KB5 VDDTTEEQGYGMAYTVHKWSELSWASHWVTFGCWIFYRLIG
:::::::::::::::::::::::::::::::::::::::::
CCDS14 VDDTTEEQGYGMAYTVHKWSELSWASHWVTFGCWIFYRLIG
410 420 430 440 450
461 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 06:26:29 2016 done: Sat Nov 5 06:26:29 2016
Total Scan time: 2.720 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]