Result of FASTA (ccds) for
pF1KB5163
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB5163, 208 aa
1>>>pF1KB5163 208 - 208 aa - 208 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.4328+/-0.00108; mu= 12.9526+/- 0.065
mean_var=82.4582+/-16.380, 0's: 0 Z-trim(104.5): 211 B-trim: 0 in 0/51
Lambda= 0.141240
statistics sampled from 7721 (7955) to 7721 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.627), E-opt: 0.2 (0.244), width: 16
Scan time: 1.940
The best scores are: opt bits E(32554)
CCDS8224.1 RAB6A gene_id:5870|Hs108|chr11 ( 208) 1346 284.0 4.6e-77
CCDS8223.1 RAB6A gene_id:5870|Hs108|chr11 ( 208) 1335 281.7 2.2e-76
CCDS3082.1 RAB6B gene_id:51560|Hs108|chr3 ( 208) 1257 265.9 1.3e-71
CCDS46408.1 RAB6C gene_id:84084|Hs108|chr2 ( 254) 1204 255.1 2.7e-68
CCDS82514.1 WTH3DI gene_id:150786|Hs108|chr2 ( 254) 1198 253.9 6.4e-68
CCDS58155.1 RAB6A gene_id:5870|Hs108|chr11 ( 175) 1121 238.1 2.5e-63
CCDS35322.2 RAB41 gene_id:347517|Hs108|chrX ( 221) 820 176.8 8.8e-45
CCDS2633.1 RAB5A gene_id:5868|Hs108|chr3 ( 215) 544 120.6 7.3e-28
CCDS11419.1 RAB5C gene_id:5878|Hs108|chr17 ( 216) 539 119.6 1.5e-27
CCDS58551.1 RAB5C gene_id:5878|Hs108|chr17 ( 249) 539 119.6 1.7e-27
CCDS8900.1 RAB5B gene_id:5869|Hs108|chr12 ( 215) 510 113.7 8.9e-26
CCDS33850.1 RAB43 gene_id:339122|Hs108|chr3 ( 212) 509 113.4 1e-25
CCDS10183.1 RAB8B gene_id:51762|Hs108|chr15 ( 207) 493 110.2 9.6e-25
CCDS12339.1 RAB8A gene_id:4218|Hs108|chr19 ( 207) 488 109.2 1.9e-24
CCDS12257.1 RAB3D gene_id:9545|Hs108|chr19 ( 219) 487 109.0 2.3e-24
CCDS45826.1 RAB31 gene_id:11031|Hs108|chr18 ( 195) 479 107.3 6.6e-24
CCDS12372.1 RAB3A gene_id:5864|Hs108|chr19 ( 220) 478 107.1 8.3e-24
CCDS1720.1 RAB10 gene_id:10890|Hs108|chr2 ( 200) 474 106.3 1.4e-23
CCDS31613.1 RAB1B gene_id:81876|Hs108|chr11 ( 201) 472 105.9 1.8e-23
CCDS3976.1 RAB3C gene_id:115827|Hs108|chr5 ( 227) 472 105.9 2e-23
CCDS1058.1 RAB13 gene_id:5872|Hs108|chr1 ( 203) 466 104.7 4.3e-23
CCDS46306.1 RAB1A gene_id:5861|Hs108|chr2 ( 205) 466 104.7 4.3e-23
CCDS33497.1 RAB22A gene_id:57403|Hs108|chr20 ( 194) 464 104.2 5.5e-23
CCDS75442.1 RAB44 gene_id:401258|Hs108|chr6 (1021) 471 106.2 7.3e-23
CCDS560.1 RAB3B gene_id:5865|Hs108|chr1 ( 219) 462 103.9 8e-23
CCDS6175.1 RAB2A gene_id:5862|Hs108|chr8 ( 212) 461 103.7 9e-23
CCDS11703.1 RAB37 gene_id:326624|Hs108|chr17 ( 216) 461 103.7 9.1e-23
CCDS10460.1 RAB26 gene_id:25837|Hs108|chr16 ( 256) 456 102.7 2.1e-22
CCDS9570.1 RAB2B gene_id:84932|Hs108|chr14 ( 216) 454 102.2 2.4e-22
CCDS54161.1 RAB37 gene_id:326624|Hs108|chr17 ( 228) 454 102.3 2.5e-22
CCDS82198.1 RAB37 gene_id:326624|Hs108|chr17 ( 196) 453 102.0 2.6e-22
CCDS32722.1 RAB37 gene_id:326624|Hs108|chr17 ( 223) 453 102.0 2.9e-22
CCDS7155.1 RAB18 gene_id:22931|Hs108|chr10 ( 206) 450 101.4 4.1e-22
CCDS44803.1 CRACR2A gene_id:84766|Hs108|chr12 ( 731) 451 102.0 9.5e-22
CCDS8264.1 RAB30 gene_id:27314|Hs108|chr11 ( 203) 442 99.8 1.3e-21
CCDS34762.2 RAB19 gene_id:401409|Hs108|chr7 ( 217) 440 99.4 1.8e-21
CCDS9003.1 RAB21 gene_id:23011|Hs108|chr12 ( 225) 440 99.4 1.8e-21
CCDS76806.1 RAB26 gene_id:25837|Hs108|chr16 ( 190) 438 98.9 2.1e-21
CCDS76691.1 RAB15 gene_id:376267|Hs108|chr14 ( 212) 437 98.8 2.7e-21
CCDS12201.1 RAB11B gene_id:9230|Hs108|chr19 ( 218) 432 97.8 5.5e-21
CCDS33030.1 RAB4B gene_id:53916|Hs108|chr19 ( 213) 429 97.1 8.2e-21
CCDS41846.1 RAB35 gene_id:11021|Hs108|chr12 ( 201) 428 96.9 9.1e-21
CCDS2520.1 RAB17 gene_id:64284|Hs108|chr2 ( 212) 428 96.9 9.5e-21
CCDS3052.1 RAB7A gene_id:7879|Hs108|chr3 ( 207) 427 96.7 1.1e-20
CCDS10212.1 RAB11A gene_id:8766|Hs108|chr15 ( 216) 427 96.7 1.1e-20
CCDS42410.1 RAB12 gene_id:201475|Hs108|chr18 ( 244) 423 96.0 2.1e-20
CCDS14766.1 RAB39B gene_id:116442|Hs108|chrX ( 213) 422 95.7 2.2e-20
CCDS6827.1 RAB14 gene_id:51552|Hs108|chr9 ( 215) 421 95.5 2.6e-20
CCDS31050.1 RAB4A gene_id:5867|Hs108|chr1 ( 218) 421 95.5 2.6e-20
CCDS8338.1 RAB39A gene_id:54734|Hs108|chr11 ( 217) 414 94.1 7e-20
>>CCDS8224.1 RAB6A gene_id:5870|Hs108|chr11 (208 aa)
initn: 1346 init1: 1346 opt: 1346 Z-score: 1497.1 bits: 284.0 E(32554): 4.6e-77
Smith-Waterman score: 1346; 100.0% identity (100.0% similar) in 208 aa overlap (1-208:1-208)
10 20 30 40 50 60
pF1KB5 MSTGGDFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 MSTGGDFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 TVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 TVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 IMLVGNKTDLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMEST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 IMLVGNKTDLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMEST
130 140 150 160 170 180
190 200
pF1KB5 QDRSREDMIDIKLEKPQEQPVSEGGCSC
::::::::::::::::::::::::::::
CCDS82 QDRSREDMIDIKLEKPQEQPVSEGGCSC
190 200
>>CCDS8223.1 RAB6A gene_id:5870|Hs108|chr11 (208 aa)
initn: 1335 init1: 1335 opt: 1335 Z-score: 1484.9 bits: 281.7 E(32554): 2.2e-76
Smith-Waterman score: 1335; 98.6% identity (100.0% similar) in 208 aa overlap (1-208:1-208)
10 20 30 40 50 60
pF1KB5 MSTGGDFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 MSTGGDFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 TVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVI
:.::::::::::::::::::::::::..::::::::::::::::::::::::::::::::
CCDS82 TIRLQLWDTAGQERFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 IMLVGNKTDLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMEST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 IMLVGNKTDLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMEST
130 140 150 160 170 180
190 200
pF1KB5 QDRSREDMIDIKLEKPQEQPVSEGGCSC
::::::::::::::::::::::::::::
CCDS82 QDRSREDMIDIKLEKPQEQPVSEGGCSC
190 200
>>CCDS3082.1 RAB6B gene_id:51560|Hs108|chr3 (208 aa)
initn: 1257 init1: 1257 opt: 1257 Z-score: 1399.1 bits: 265.9 E(32554): 1.3e-71
Smith-Waterman score: 1257; 90.9% identity (99.0% similar) in 208 aa overlap (1-208:1-208)
10 20 30 40 50 60
pF1KB5 MSTGGDFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDR
::.:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 MSAGGDFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 TVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVI
:::::::::::::::::::::::::::::::::::::.::::::.:::::::::::::::
CCDS30 TVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 IMLVGNKTDLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMEST
:::::::::::::::..:::::..::::.:::::::::.::::::::::::.::::::..
CCDS30 IMLVGNKTDLADKRQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVASALPGMENV
130 140 150 160 170 180
190 200
pF1KB5 QDRSREDMIDIKLEKPQEQPVSEGGCSC
:..:.: ::::::.:::: :.:::::::
CCDS30 QEKSKEGMIDIKLDKPQEPPASEGGCSC
190 200
>>CCDS46408.1 RAB6C gene_id:84084|Hs108|chr2 (254 aa)
initn: 1204 init1: 1204 opt: 1204 Z-score: 1339.5 bits: 255.1 E(32554): 2.7e-68
Smith-Waterman score: 1204; 89.9% identity (94.2% similar) in 208 aa overlap (1-208:1-208)
10 20 30 40 50 60
pF1KB5 MSTGGDFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDR
::.:::::::::::::::::::::.:::::::: :::::::::: ::::::::::::::
CCDS46 MSAGGDFGNPLRKFKLVFLGEQSVAKTSLITRFRYDSFDNTYQAIIGIDFLSKTMYLEDG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 TVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVI
:. :.:::::::::.::::: :::::..::::::::::::::::::::::::::::::::
CCDS46 TIGLRLWDTAGQERLRSLIPRYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 IMLVGNKTDLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMEST
: ::::.::::::::::.:::::::: ::: :::: ::::::::::::::::::::::::
CCDS46 ITLVGNRTDLADKRQVSVEEGERKAKGLNVTFIETRAKAGYNVKQLFRRVAAALPGMEST
130 140 150 160 170 180
190 200
pF1KB5 QDRSREDMIDIKLEKPQEQPVSEGGCSC
:: ::::: :::::::::: ::::::::
CCDS46 QDGSREDMSDIKLEKPQEQTVSEGGCSCYSPMSSSTLPQKPPYSFIDCSVNIGLNLFPSL
190 200 210 220 230 240
>>CCDS82514.1 WTH3DI gene_id:150786|Hs108|chr2 (254 aa)
initn: 1198 init1: 1198 opt: 1198 Z-score: 1332.9 bits: 253.9 E(32554): 6.4e-68
Smith-Waterman score: 1198; 90.4% identity (93.8% similar) in 208 aa overlap (1-208:1-208)
10 20 30 40 50 60
pF1KB5 MSTGGDFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDR
::.:::::::::::::::::::::.:::::::: :::::::::: ::::::::::::::
CCDS82 MSAGGDFGNPLRKFKLVFLGEQSVAKTSLITRFRYDSFDNTYQAIIGIDFLSKTMYLEDG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 TVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVI
:. :.:::::::::.::::: :::::..:::::::::::::::::::::::::: :::::
CCDS82 TIGLRLWDTAGQERLRSLIPRYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTEGGSDVI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 IMLVGNKTDLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMEST
: :::::::::::::::::::::::: ::: :::: ::::::::::::::::::::::::
CCDS82 ITLVGNKTDLADKRQVSIEEGERKAKGLNVTFIETRAKAGYNVKQLFRRVAAALPGMEST
130 140 150 160 170 180
190 200
pF1KB5 QDRSREDMIDIKLEKPQEQPVSEGGCSC
:: ::::: :::::::::: ::::::::
CCDS82 QDGSREDMSDIKLEKPQEQTVSEGGCSCYSPMSSSTLPQKPPYSFIDCSVNIGLNLFPSL
190 200 210 220 230 240
>>CCDS58155.1 RAB6A gene_id:5870|Hs108|chr11 (175 aa)
initn: 1121 init1: 1121 opt: 1121 Z-score: 1250.3 bits: 238.1 E(32554): 2.5e-63
Smith-Waterman score: 1121; 98.3% identity (100.0% similar) in 175 aa overlap (34-208:1-175)
10 20 30 40 50 60
pF1KB5 GGDFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVR
::::::::::::::::::::::::::::.:
CCDS58 MYDSFDNTYQATIGIDFLSKTMYLEDRTIR
10 20 30
70 80 90 100 110 120
pF1KB5 LQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIML
:::::::::::::::::::::::..:::::::::::::::::::::::::::::::::::
CCDS58 LQLWDTAGQERFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIML
40 50 60 70 80 90
130 140 150 160 170 180
pF1KB5 VGNKTDLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 VGNKTDLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDR
100 110 120 130 140 150
190 200
pF1KB5 SREDMIDIKLEKPQEQPVSEGGCSC
:::::::::::::::::::::::::
CCDS58 SREDMIDIKLEKPQEQPVSEGGCSC
160 170
>>CCDS35322.2 RAB41 gene_id:347517|Hs108|chrX (221 aa)
initn: 800 init1: 759 opt: 820 Z-score: 917.4 bits: 176.8 E(32554): 8.8e-45
Smith-Waterman score: 820; 68.1% identity (88.8% similar) in 188 aa overlap (11-198:29-214)
10 20 30 40
pF1KB5 MSTGGDFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTY
: : ::.:::::: ::::.:.::::.:: .
CCDS35 MSAFGHDEAWMEAGGFGLEAAERTEYQSLCKSKLLFLGEQS-GKTSIISRFMYNSFGCAC
10 20 30 40 50
50 60 70 80 90 100
pF1KB5 QATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQ
:::.:::::::::::::. :.::::::::::::.:::::::::::.:::::::::.:::.
CCDS35 QATVGIDFLSKTMYLEDQIVQLQLWDTAGQERFHSLIPSYIRDSTIAVVVYDITNINSFK
60 70 80 90 100 110
110 120 130 140 150 160
pF1KB5 QTTKWIDDVRTERGSDVIIMLVGNKTDLADKRQVSIEEGERKAKELNVMFIETSAKAGYN
.: ::.. ::.:::.::.:::.::: :: .::::. :.::.:...:::::::::::.:::
CCDS35 ETDKWVEHVRAERGDDVVIMLLGNKIDLDNKRQVTAEQGEEKSRNLNVMFIETSAKTGYN
120 130 140 150 160 170
170 180 190 200
pF1KB5 VKQLFRRVAAALPGMESTQDRSREDMIDIKLEKPQEQPVSEGGCSC
::.::::::.:: . ... .: ..:.::. .:
CCDS35 VKKLFRRVASALLSTRTSPP-PKEGTVEIELESFEESGNRSYC
180 190 200 210 220
>>CCDS2633.1 RAB5A gene_id:5868|Hs108|chr3 (215 aa)
initn: 547 init1: 532 opt: 544 Z-score: 613.7 bits: 120.6 E(32554): 7.3e-28
Smith-Waterman score: 544; 41.5% identity (72.9% similar) in 207 aa overlap (4-207:11-214)
10 20 30 40 50
pF1KB5 MSTGGDFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSK
: . :: . .::::.:::..:::.::. ::. .: . ..::: ::..
CCDS26 MASRGATRPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQ
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB5 TMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRT
:. :.: ::....::::::::..:: : : : . .:.::::::: .:: .. .:. ...
CCDS26 TVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQR
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB5 ERGSDVIIMLVGNKTDLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAA
. . ...: : :::.:::.:: :...:.. : . ...:.:::::...::...: .:
CCDS26 QASPNIVIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKK
130 140 150 160 170 180
180 190 200
pF1KB5 LPGMESTQ---DRSREDMIDIKLEKPQEQPVSEGGCSC
:: : . . .: .: : .: ::. . ::
CCDS26 LPKNEPQNPGANSARGRGVD--LTEPT-QPTRNQCCSN
190 200 210
>>CCDS11419.1 RAB5C gene_id:5878|Hs108|chr17 (216 aa)
initn: 526 init1: 526 opt: 539 Z-score: 608.1 bits: 119.6 E(32554): 1.5e-27
Smith-Waterman score: 539; 40.4% identity (74.5% similar) in 208 aa overlap (4-208:12-214)
10 20 30 40 50
pF1KB5 MSTGGDFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLS
: :: . .::::.:::..:::.::. ::. .: . ..::: ::.
CCDS11 MAGRGGAARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB5 KTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVR
.:. :.: ::....::::::::..:: : : : . .:.:::::::...: .. .:. ...
CCDS11 QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQ
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB5 TERGSDVIIMLVGNKTDLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAA
. . ...: :.:::.:::.:: : ..:.. : . ...:.:::::...::...: .:
CCDS11 RQASPNIVIALAGNKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAK
130 140 150 160 170 180
180 190 200
pF1KB5 ALPGME---STQDRSREDMIDIKLEKPQEQPVSEGGCSC
:: : .: .:. .:.. ...:.:.. : :
CCDS11 KLPKNEPQNATGAPGRNRGVDLQ----ENNPASRSQC-CSN
190 200 210
>>CCDS58551.1 RAB5C gene_id:5878|Hs108|chr17 (249 aa)
initn: 526 init1: 526 opt: 539 Z-score: 607.3 bits: 119.6 E(32554): 1.7e-27
Smith-Waterman score: 539; 40.4% identity (74.5% similar) in 208 aa overlap (4-208:45-247)
10 20 30
pF1KB5 MSTGGDFGNPLRKFKLVFLGEQSVGKTSLITRF
: :: . .::::.:::..:::.::. ::
CCDS58 LHSTSPHPHALWTTTAGRAMAGRGGAARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRF
20 30 40 50 60 70
40 50 60 70 80 90
pF1KB5 MYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVY
. .: . ..::: ::..:. :.: ::....::::::::..:: : : : . .:.:::
CCDS58 VKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVY
80 90 100 110 120 130
100 110 120 130 140 150
pF1KB5 DITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTDLADKRQVSIEEGERKAKELNVMFI
::::...: .. .:. ... . . ...: :.:::.:::.:: : ..:.. : . ...:.
CCDS58 DITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASKRAVEFQEAQAYADDNSLLFM
140 150 160 170 180 190
160 170 180 190 200
pF1KB5 ETSAKAGYNVKQLFRRVAAALPGME---STQDRSREDMIDIKLEKPQEQPVSEGGCSC
:::::...::...: .: :: : .: .:. .:.. ...:.:.. : :
CCDS58 ETSAKTAMNVNEIFMAIAKKLPKNEPQNATGAPGRNRGVDLQ----ENNPASRSQC-CSN
200 210 220 230 240
208 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 20:20:39 2016 done: Fri Nov 4 20:20:40 2016
Total Scan time: 1.940 Total Display time: -0.010
Function used was FASTA [36.3.4 Apr, 2011]