Result of FASTA (omim) for
pF1KB4982
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB4982, 801 aa
1>>>pF1KB4982 801 - 801 aa - 801 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.3225+/-0.000473; mu= 14.3523+/- 0.030
mean_var=326.2447+/-70.453, 0's: 0 Z-trim(119.1): 1789 B-trim: 1269 in 1/54
Lambda= 0.071007
statistics sampled from 30476 (32699) to 30476 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.708), E-opt: 0.2 (0.383), width: 16
Scan time: 12.640
The best scores are: opt bits E(85289)
NP_036538 (OMIM: 605780) PR domain zinc finger pro ( 801) 5478 576.2 1.9e-163
XP_005268650 (OMIM: 605780) PREDICTED: PR domain z ( 808) 5454 573.7 1.1e-162
NP_078780 (OMIM: 611781) PR domain zinc finger pro ( 571) 576 73.8 2.4e-12
XP_016873758 (OMIM: 605015) PREDICTED: zinc finger ( 592) 565 72.7 5.3e-12
XP_005253186 (OMIM: 605015) PREDICTED: zinc finger ( 592) 565 72.7 5.3e-12
XP_006718372 (OMIM: 605015) PREDICTED: zinc finger ( 592) 565 72.7 5.3e-12
XP_011518659 (OMIM: 605015) PREDICTED: zinc finger ( 592) 565 72.7 5.3e-12
XP_005253185 (OMIM: 605015) PREDICTED: zinc finger ( 606) 565 72.7 5.4e-12
XP_006718371 (OMIM: 605015) PREDICTED: zinc finger ( 606) 565 72.7 5.4e-12
NP_037381 (OMIM: 605015) zinc finger protein 214 [ ( 606) 565 72.7 5.4e-12
XP_011518657 (OMIM: 605015) PREDICTED: zinc finger ( 617) 565 72.7 5.4e-12
XP_011515874 (OMIM: 611781) PREDICTED: PR domain z ( 316) 548 70.5 1.3e-11
XP_016882933 (OMIM: 616841) PREDICTED: zinc finger ( 469) 550 71.0 1.4e-11
NP_001008801 (OMIM: 616841) zinc finger protein 46 ( 522) 550 71.1 1.4e-11
XP_016882932 (OMIM: 616841) PREDICTED: zinc finger ( 541) 550 71.1 1.5e-11
XP_016882723 (OMIM: 603899) PREDICTED: zinc finger ( 518) 548 70.9 1.7e-11
NP_001243102 (OMIM: 603899) zinc finger protein 85 ( 531) 548 70.9 1.7e-11
XP_011526566 (OMIM: 603899) PREDICTED: zinc finger ( 536) 548 70.9 1.7e-11
NP_003420 (OMIM: 603899) zinc finger protein 85 is ( 595) 548 71.0 1.8e-11
NP_001243100 (OMIM: 603899) zinc finger protein 85 ( 625) 548 71.0 1.8e-11
XP_011526565 (OMIM: 603899) PREDICTED: zinc finger ( 640) 548 71.0 1.8e-11
NP_001309067 (OMIM: 600398) zinc finger protein 16 ( 782) 548 71.1 2e-11
NP_001309066 (OMIM: 600398) zinc finger protein 16 ( 782) 548 71.1 2e-11
NP_001309068 (OMIM: 600398) zinc finger protein 16 ( 782) 548 71.1 2e-11
NP_001309062 (OMIM: 600398) zinc finger protein 16 ( 818) 548 71.2 2.1e-11
NP_001309063 (OMIM: 600398) zinc finger protein 16 ( 818) 548 71.2 2.1e-11
NP_001309065 (OMIM: 600398) zinc finger protein 16 ( 818) 548 71.2 2.1e-11
NP_001309058 (OMIM: 600398) zinc finger protein 16 ( 818) 548 71.2 2.1e-11
NP_001309064 (OMIM: 600398) zinc finger protein 16 ( 818) 548 71.2 2.1e-11
NP_001309060 (OMIM: 600398) zinc finger protein 16 ( 818) 548 71.2 2.1e-11
NP_942596 (OMIM: 600398) zinc finger protein 160 i ( 818) 548 71.2 2.1e-11
NP_001309057 (OMIM: 600398) zinc finger protein 16 ( 818) 548 71.2 2.1e-11
XP_016882935 (OMIM: 600398) PREDICTED: zinc finger ( 818) 548 71.2 2.1e-11
NP_001309059 (OMIM: 600398) zinc finger protein 16 ( 818) 548 71.2 2.1e-11
NP_150630 (OMIM: 600398) zinc finger protein 160 i ( 818) 548 71.2 2.1e-11
NP_001096073 (OMIM: 600398) zinc finger protein 16 ( 818) 548 71.2 2.1e-11
NP_001309061 (OMIM: 600398) zinc finger protein 16 ( 818) 548 71.2 2.1e-11
XP_016882934 (OMIM: 600398) PREDICTED: zinc finger ( 837) 548 71.2 2.1e-11
NP_775802 (OMIM: 603982) zinc finger protein 100 [ ( 542) 543 70.4 2.4e-11
XP_016881641 (OMIM: 604750) PREDICTED: zinc finger ( 502) 539 69.9 3.1e-11
XP_016881642 (OMIM: 604750) PREDICTED: zinc finger ( 502) 539 69.9 3.1e-11
XP_011542202 (OMIM: 300498,314998) PREDICTED: zinc ( 661) 540 70.2 3.3e-11
XP_005272657 (OMIM: 300498,314998) PREDICTED: zinc ( 661) 540 70.2 3.3e-11
XP_016884976 (OMIM: 300498,314998) PREDICTED: zinc ( 661) 540 70.2 3.3e-11
XP_016884975 (OMIM: 300498,314998) PREDICTED: zinc ( 661) 540 70.2 3.3e-11
XP_011542201 (OMIM: 300498,314998) PREDICTED: zinc ( 661) 540 70.2 3.3e-11
NP_009068 (OMIM: 300498,314998) zinc finger protei ( 661) 540 70.2 3.3e-11
NP_998763 (OMIM: 616847) zinc finger protein 543 [ ( 600) 539 70.0 3.4e-11
XP_016881882 (OMIM: 606427) PREDICTED: zinc finger ( 509) 537 69.7 3.6e-11
XP_016881888 (OMIM: 606427) PREDICTED: zinc finger ( 509) 537 69.7 3.6e-11
>>NP_036538 (OMIM: 605780) PR domain zinc finger protein (801 aa)
initn: 5478 init1: 5478 opt: 5478 Z-score: 3055.3 bits: 576.2 E(85289): 1.9e-163
Smith-Waterman score: 5478; 100.0% identity (100.0% similar) in 801 aa overlap (1-801:1-801)
10 20 30 40 50 60
pF1KB4 MHHRMNEMNLSPVGMEQLTSSSVSNALPVSGSHLGLAASPTHSAIPAPGLPVAIPNLGPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 MHHRMNEMNLSPVGMEQLTSSSVSNALPVSGSHLGLAASPTHSAIPAPGLPVAIPNLGPS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 LSSLPSALSLMLPMGIGDRGVMCGLPERNYTLPPPPYPHLESSYFRTILPGILSYLADRP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 LSSLPSALSLMLPMGIGDRGVMCGLPERNYTLPPPPYPHLESSYFRTILPGILSYLADRP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 PPQYIHPNSINVDGNTALSITNNPSALDPYQSNGNVGLEPGIVSIDSRSVNTHGAQSLHP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 PPQYIHPNSINVDGNTALSITNNPSALDPYQSNGNVGLEPGIVSIDSRSVNTHGAQSLHP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB4 SDGHEVALDTAITMENVSRVTSPISTDGMAEELTMDGVAGEHSQIPNGSRSHEPLSVDSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 SDGHEVALDTAITMENVSRVTSPISTDGMAEELTMDGVAGEHSQIPNGSRSHEPLSVDSV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB4 SNNLAADAVGHGGVIPMHGNGLELPVVMETDHIASRVNGMSDSALSDSIHTVAMSTNSVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 SNNLAADAVGHGGVIPMHGNGLELPVVMETDHIASRVNGMSDSALSDSIHTVAMSTNSVS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB4 VALSTSHNLASLESVSLHEVGLSLEPVAVSSITQEVAMGTGHVDVSSDSLSFVSPSLQME
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 VALSTSHNLASLESVSLHEVGLSLEPVAVSSITQEVAMGTGHVDVSSDSLSFVSPSLQME
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB4 DSNSNKENMATLFTIWCTLCDRAYPSDCPEHGPVTFVPDTPIESRARLSLPKQLVLRQSI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 DSNSNKENMATLFTIWCTLCDRAYPSDCPEHGPVTFVPDTPIESRARLSLPKQLVLRQSI
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB4 VGAEVGVWTGETIPVRTCFGPLIGQQSHSMEVAEWTDKAVNHIWKIYHNGVLEFCIITTD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 VGAEVGVWTGETIPVRTCFGPLIGQQSHSMEVAEWTDKAVNHIWKIYHNGVLEFCIITTD
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB4 ENECNWMMFVRKARNREEQNLVAYPHDGKIFFCTSQDIPPENELLFYYSRDYAQQIGVPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 ENECNWMMFVRKARNREEQNLVAYPHDGKIFFCTSQDIPPENELLFYYSRDYAQQIGVPE
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB4 HPDVHLCNCGKECNSYTEFKAHLTSHIHNHLPTQGHSGSHGPSHSKERKWKCSMCPQAFI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 HPDVHLCNCGKECNSYTEFKAHLTSHIHNHLPTQGHSGSHGPSHSKERKWKCSMCPQAFI
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB4 SPSKLHVHFMGHMGMKPHKCDFCSKAFSDPSNLRTHLKIHTGQKNYRCTLCDKSFTQKAH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 SPSKLHVHFMGHMGMKPHKCDFCSKAFSDPSNLRTHLKIHTGQKNYRCTLCDKSFTQKAH
610 620 630 640 650 660
670 680 690 700 710 720
pF1KB4 LESHMVIHTGEKNLKCDYCDKLFMRRQDLKQHVLIHTQERQIKCPKCDKLFLRTNHLKKH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 LESHMVIHTGEKNLKCDYCDKLFMRRQDLKQHVLIHTQERQIKCPKCDKLFLRTNHLKKH
670 680 690 700 710 720
730 740 750 760 770 780
pF1KB4 LNSHEGKRDYVCEKCTKAYLTKYHLTRHLKTCKGPTSSSSAPEEEEEDDSEEEDLADSVG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 LNSHEGKRDYVCEKCTKAYLTKYHLTRHLKTCKGPTSSSSAPEEEEEDDSEEEDLADSVG
730 740 750 760 770 780
790 800
pF1KB4 TEDCRINSAVYSADESLSAHK
:::::::::::::::::::::
NP_036 TEDCRINSAVYSADESLSAHK
790 800
>>XP_005268650 (OMIM: 605780) PREDICTED: PR domain zinc (808 aa)
initn: 5464 init1: 2788 opt: 5454 Z-score: 3041.9 bits: 573.7 E(85289): 1.1e-162
Smith-Waterman score: 5454; 99.1% identity (99.1% similar) in 808 aa overlap (1-801:1-808)
10 20 30 40 50 60
pF1KB4 MHHRMNEMNLSPVGMEQLTSSSVSNALPVSGSHLGLAASPTHSAIPAPGLPVAIPNLGPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MHHRMNEMNLSPVGMEQLTSSSVSNALPVSGSHLGLAASPTHSAIPAPGLPVAIPNLGPS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 LSSLPSALSLMLPMGIGDRGVMCGLPERNYTLPPPPYPHLESSYFRTILPGILSYLADRP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LSSLPSALSLMLPMGIGDRGVMCGLPERNYTLPPPPYPHLESSYFRTILPGILSYLADRP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 PPQYIHPNSINVDGNTALSITNNPSALDPYQSNGNVGLEPGIVSIDSRSVNTHGAQSLHP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PPQYIHPNSINVDGNTALSITNNPSALDPYQSNGNVGLEPGIVSIDSRSVNTHGAQSLHP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB4 SDGHEVALDTAITMENVSRVTSPISTDGMAEELTMDGVAGEHSQIPNGSRSHEPLSVDSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SDGHEVALDTAITMENVSRVTSPISTDGMAEELTMDGVAGEHSQIPNGSRSHEPLSVDSV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB4 SNNLAADAVGHGGVIPMHGNGLELPVVMETDHIASRVNGMSDSALSDSIHTVAMSTNSVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SNNLAADAVGHGGVIPMHGNGLELPVVMETDHIASRVNGMSDSALSDSIHTVAMSTNSVS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB4 VALSTSHNLASLESVSLHEVGLSLEPVAVSSITQEVAMGTGHVDVSSDSLSFVSPSLQME
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VALSTSHNLASLESVSLHEVGLSLEPVAVSSITQEVAMGTGHVDVSSDSLSFVSPSLQME
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB4 DSNSNKENMATLFTIWCTLCDRAYPSDCPEHGPVTFVPDTPIESRARLSLPKQLVLRQSI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DSNSNKENMATLFTIWCTLCDRAYPSDCPEHGPVTFVPDTPIESRARLSLPKQLVLRQSI
370 380 390 400 410 420
430 440 450 460 470
pF1KB4 VGAEV-------GVWTGETIPVRTCFGPLIGQQSHSMEVAEWTDKAVNHIWKIYHNGVLE
::::: ::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VGAEVVGVLPLTGVWTGETIPVRTCFGPLIGQQSHSMEVAEWTDKAVNHIWKIYHNGVLE
430 440 450 460 470 480
480 490 500 510 520 530
pF1KB4 FCIITTDENECNWMMFVRKARNREEQNLVAYPHDGKIFFCTSQDIPPENELLFYYSRDYA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 FCIITTDENECNWMMFVRKARNREEQNLVAYPHDGKIFFCTSQDIPPENELLFYYSRDYA
490 500 510 520 530 540
540 550 560 570 580 590
pF1KB4 QQIGVPEHPDVHLCNCGKECNSYTEFKAHLTSHIHNHLPTQGHSGSHGPSHSKERKWKCS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QQIGVPEHPDVHLCNCGKECNSYTEFKAHLTSHIHNHLPTQGHSGSHGPSHSKERKWKCS
550 560 570 580 590 600
600 610 620 630 640 650
pF1KB4 MCPQAFISPSKLHVHFMGHMGMKPHKCDFCSKAFSDPSNLRTHLKIHTGQKNYRCTLCDK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MCPQAFISPSKLHVHFMGHMGMKPHKCDFCSKAFSDPSNLRTHLKIHTGQKNYRCTLCDK
610 620 630 640 650 660
660 670 680 690 700 710
pF1KB4 SFTQKAHLESHMVIHTGEKNLKCDYCDKLFMRRQDLKQHVLIHTQERQIKCPKCDKLFLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SFTQKAHLESHMVIHTGEKNLKCDYCDKLFMRRQDLKQHVLIHTQERQIKCPKCDKLFLR
670 680 690 700 710 720
720 730 740 750 760 770
pF1KB4 TNHLKKHLNSHEGKRDYVCEKCTKAYLTKYHLTRHLKTCKGPTSSSSAPEEEEEDDSEEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TNHLKKHLNSHEGKRDYVCEKCTKAYLTKYHLTRHLKTCKGPTSSSSAPEEEEEDDSEEE
730 740 750 760 770 780
780 790 800
pF1KB4 DLADSVGTEDCRINSAVYSADESLSAHK
::::::::::::::::::::::::::::
XP_005 DLADSVGTEDCRINSAVYSADESLSAHK
790 800
>>NP_078780 (OMIM: 611781) PR domain zinc finger protein (571 aa)
initn: 444 init1: 266 opt: 576 Z-score: 342.7 bits: 73.8 E(85289): 2.4e-12
Smith-Waterman score: 576; 29.7% identity (60.8% similar) in 347 aa overlap (389-725:230-569)
360 370 380 390 400 410
pF1KB4 MEDSNSNKENMATLFTIWCTLCDRAYPSDCPEHGPVTFVPDTPIESRARLSLPKQLVLRQ
:. . .:.: .. :.::. : : :
NP_078 EDLHFVLYGVTPSLEHPASLHHAISGLLVPPDSSGSDSLPQT--LDKDSLQLPEGLCLMQ
200 210 220 230 240 250
420 430 440 450 460 470
pF1KB4 SIVGA--EVGVWTGETIPVRTCFGPLIGQQSHSMEVAEWTDKAVNHIWKIYHNGVLEFCI
.. : . ::. . : . :::. :. .. :: . :..: .:.:...: : .
NP_078 TVFGEVPHFGVFCSSFIAKGVRFGPFQGKVVNASEVKTYGDNSV--MWEIFEDGHLSH-F
260 270 280 290 300 310
480 490 500 510 520 530
pF1KB4 ITTDENECNWMMFVRKARNREEQNLVAYPHDGKIFFCTSQDIPPENELLFYYSRDYAQQI
: . ::: .: :: .:::::: .:.::. . ..: ..::: .:. : . .
NP_078 IDGKGGTGNWMSYVNCARFPKEQNLVAVQCQGHIFYESCKEIHQNQELLVWYGDCYEKFL
320 330 340 350 360 370
540 550 560 570 580 590
pF1KB4 GVPEHPDVHLCNCGKECNSYTE-----FKAHLTSHIHNHLPTQGHSGSHGPSHSK-ERKW
.: .... . ::. .. .: .. . ... .. . . .. : .: .::.
NP_078 DIPV--SLQVTEPGKQPSGPSEESAEGYRCERCGKVFTYKYYRDKHLKYTPCVDKGDRKF
380 390 400 410 420 430
600 610 620 630 640
pF1KB4 KCSMCPQAFISPSKLHVHFMG-HMGMKPHKCDFCSKAFSDPSNLRTHLKIHTGQKNYRCT
::.: ..: . ..:..:.. : .::::. :.: ::. :.: :...:.:.. :.:.
NP_078 PCSLCKRSFEKRDRLRIHILHVHEKHRPHKCSTCGKCFSQSSSLNKHMRVHSGDRPYQCV
440 450 460 470 480 490
650 660 670 680 690 700
pF1KB4 LCDKSFTQKAHLESHMVIHTGEKNLKCDYCDKLFMRRQDLKQHVL-IHTQERQIKCPKCD
: : :: .. :..:. :.::: .:: :: : : . .:: : .. .: :
NP_078 YCTKRFTASSILRTHIRQHSGEKPFKCKYCGKSFASHAAHDSHVRRSHKEDDGCSCSICG
500 510 520 530 540 550
710 720 730 740 750 760
pF1KB4 KLFLRTNHLKKHLNSHEGKRDYVCEKCTKAYLTKYHLTRHLKTCKGPTSSSSAPEEEEED
:.: . . .:.. ::
NP_078 KIFSDQETFYSHMKFHEDY
560 570
>>XP_016873758 (OMIM: 605015) PREDICTED: zinc finger pro (592 aa)
initn: 548 init1: 548 opt: 565 Z-score: 336.5 bits: 72.7 E(85289): 5.3e-12
Smith-Waterman score: 595; 31.6% identity (54.0% similar) in 376 aa overlap (404-754:158-508)
380 390 400 410 420 430
pF1KB4 TIWCTLCDRAYPSDCPEHGPVTFVPDTPIESRARLSLPKQ--LVLRQSIVGAEVGVWTGE
:: ::. :. :....: . .: :
XP_016 LETKTTQDYGREIYMSGSHGFQGGRYRLGISRKNLSMEKEQKLIVQHSYIPVE------E
130 140 150 160 170 180
440 450 460 470 480
pF1KB4 TIPVRTCFGPLIGQQSHSMEVAEWTDKAVNHIWKIYHNGVLEFCII----TTDENECNWM
..: . .: :.. . : . :. ::. . :.. :: :.
XP_016 ALPQ---YVGVICQEDLLRDSMEEKYCGCNKCKGIYYWN--SRCVFHKRNQPGENLCQ--
190 200 210 220 230
490 500 510 520 530 540
pF1KB4 MFVRKARNREEQNLVAYP--HDGKIFF-CTSQDIPPENELLFYYSRDYAQQIGVPEHPDV
. :: ....: .: : :: .. : : .. :. :: : :
XP_016 CSICKACFSQRSDLYRHPRNHIGKKLYGCDEVD------------GNFHQSSGVHFHQRV
240 250 260 270 280
550 560 570 580
pF1KB4 HL------CN-CGKECNSYTEFKAHLTSHIHNH---------LPTQGHSGSHGPSHSKER
:. :: ::: .. . .. : : ... : .. : : :.
XP_016 HIGEVPYSCNACGKSFSQISSLHNHQRVHTEEKFYKIECDKDLSRNSLLHIHQRLHIGEK
290 300 310 320 330 340
590 600 610 620 630 640
pF1KB4 KWKCSMCPQAFISPSKLHVHFMGHMGMKPHKCDFCSKAFSDPSNLRTHLKIHTGQKNYRC
.::..: ..: : :::: : : ::.::: :.:.::. :::: : .:::.:.:.:
XP_016 PFKCNQCGKSFNRSSVLHVHQRVHTGEKPYKCDECGKGFSQSSNLRIHQLVHTGEKSYKC
350 360 370 380 390 400
650 660 670 680 690 700
pF1KB4 TLCDKSFTQKAHLESHMVIHTGEKNLKCDYCDKLFMRRQDLKQHVLIHTQERQIKCPKCD
: :.:::...:. :. .::::: ::: : : : . .::. : .:: :. ::.:
XP_016 EDCGKGFTQRSNLQIHQRVHTGEKPYKCDDCGKDFSHSSDLRIHQRVHTGEKPYTCPECG
410 420 430 440 450 460
710 720 730 740 750 760
pF1KB4 KLFLRTNHLKKHLNSHEGKRDYVCEKCTKAYLTKYHLTRHLKTCKGPTSSSSAPEEEEED
: : ....:. : : :.. : ::.: :.. . :: : .. :
XP_016 KGFSKSSKLHTHQRVHTGEKPYKCEECGKGFSQRSHLLIHQRVHTGEKPYKCHDCGKGFS
470 480 490 500 510 520
770 780 790 800
pF1KB4 DSEEEDLADSVGTEDCRINSAVYSADESLSAHK
XP_016 HSSNLHIHQRVHTGEKPYQCAKCGKGFSHSSALRIHQRVHAGEKPYKCREYYKGFDHNSH
530 540 550 560 570 580
>>XP_005253186 (OMIM: 605015) PREDICTED: zinc finger pro (592 aa)
initn: 548 init1: 548 opt: 565 Z-score: 336.5 bits: 72.7 E(85289): 5.3e-12
Smith-Waterman score: 595; 31.6% identity (54.0% similar) in 376 aa overlap (404-754:158-508)
380 390 400 410 420 430
pF1KB4 TIWCTLCDRAYPSDCPEHGPVTFVPDTPIESRARLSLPKQ--LVLRQSIVGAEVGVWTGE
:: ::. :. :....: . .: :
XP_005 LETKTTQDYGREIYMSGSHGFQGGRYRLGISRKNLSMEKEQKLIVQHSYIPVE------E
130 140 150 160 170 180
440 450 460 470 480
pF1KB4 TIPVRTCFGPLIGQQSHSMEVAEWTDKAVNHIWKIYHNGVLEFCII----TTDENECNWM
..: . .: :.. . : . :. ::. . :.. :: :.
XP_005 ALPQ---YVGVICQEDLLRDSMEEKYCGCNKCKGIYYWN--SRCVFHKRNQPGENLCQ--
190 200 210 220 230
490 500 510 520 530 540
pF1KB4 MFVRKARNREEQNLVAYP--HDGKIFF-CTSQDIPPENELLFYYSRDYAQQIGVPEHPDV
. :: ....: .: : :: .. : : .. :. :: : :
XP_005 CSICKACFSQRSDLYRHPRNHIGKKLYGCDEVD------------GNFHQSSGVHFHQRV
240 250 260 270 280
550 560 570 580
pF1KB4 HL------CN-CGKECNSYTEFKAHLTSHIHNH---------LPTQGHSGSHGPSHSKER
:. :: ::: .. . .. : : ... : .. : : :.
XP_005 HIGEVPYSCNACGKSFSQISSLHNHQRVHTEEKFYKIECDKDLSRNSLLHIHQRLHIGEK
290 300 310 320 330 340
590 600 610 620 630 640
pF1KB4 KWKCSMCPQAFISPSKLHVHFMGHMGMKPHKCDFCSKAFSDPSNLRTHLKIHTGQKNYRC
.::..: ..: : :::: : : ::.::: :.:.::. :::: : .:::.:.:.:
XP_005 PFKCNQCGKSFNRSSVLHVHQRVHTGEKPYKCDECGKGFSQSSNLRIHQLVHTGEKSYKC
350 360 370 380 390 400
650 660 670 680 690 700
pF1KB4 TLCDKSFTQKAHLESHMVIHTGEKNLKCDYCDKLFMRRQDLKQHVLIHTQERQIKCPKCD
: :.:::...:. :. .::::: ::: : : : . .::. : .:: :. ::.:
XP_005 EDCGKGFTQRSNLQIHQRVHTGEKPYKCDDCGKDFSHSSDLRIHQRVHTGEKPYTCPECG
410 420 430 440 450 460
710 720 730 740 750 760
pF1KB4 KLFLRTNHLKKHLNSHEGKRDYVCEKCTKAYLTKYHLTRHLKTCKGPTSSSSAPEEEEED
: : ....:. : : :.. : ::.: :.. . :: : .. :
XP_005 KGFSKSSKLHTHQRVHTGEKPYKCEECGKGFSQRSHLLIHQRVHTGEKPYKCHDCGKGFS
470 480 490 500 510 520
770 780 790 800
pF1KB4 DSEEEDLADSVGTEDCRINSAVYSADESLSAHK
XP_005 HSSNLHIHQRVHTGEKPYQCAKCGKGFSHSSALRIHQRVHAGEKPYKCREYYKGFDHNSH
530 540 550 560 570 580
>>XP_006718372 (OMIM: 605015) PREDICTED: zinc finger pro (592 aa)
initn: 548 init1: 548 opt: 565 Z-score: 336.5 bits: 72.7 E(85289): 5.3e-12
Smith-Waterman score: 595; 31.6% identity (54.0% similar) in 376 aa overlap (404-754:158-508)
380 390 400 410 420 430
pF1KB4 TIWCTLCDRAYPSDCPEHGPVTFVPDTPIESRARLSLPKQ--LVLRQSIVGAEVGVWTGE
:: ::. :. :....: . .: :
XP_006 LETKTTQDYGREIYMSGSHGFQGGRYRLGISRKNLSMEKEQKLIVQHSYIPVE------E
130 140 150 160 170 180
440 450 460 470 480
pF1KB4 TIPVRTCFGPLIGQQSHSMEVAEWTDKAVNHIWKIYHNGVLEFCII----TTDENECNWM
..: . .: :.. . : . :. ::. . :.. :: :.
XP_006 ALPQ---YVGVICQEDLLRDSMEEKYCGCNKCKGIYYWN--SRCVFHKRNQPGENLCQ--
190 200 210 220 230
490 500 510 520 530 540
pF1KB4 MFVRKARNREEQNLVAYP--HDGKIFF-CTSQDIPPENELLFYYSRDYAQQIGVPEHPDV
. :: ....: .: : :: .. : : .. :. :: : :
XP_006 CSICKACFSQRSDLYRHPRNHIGKKLYGCDEVD------------GNFHQSSGVHFHQRV
240 250 260 270 280
550 560 570 580
pF1KB4 HL------CN-CGKECNSYTEFKAHLTSHIHNH---------LPTQGHSGSHGPSHSKER
:. :: ::: .. . .. : : ... : .. : : :.
XP_006 HIGEVPYSCNACGKSFSQISSLHNHQRVHTEEKFYKIECDKDLSRNSLLHIHQRLHIGEK
290 300 310 320 330 340
590 600 610 620 630 640
pF1KB4 KWKCSMCPQAFISPSKLHVHFMGHMGMKPHKCDFCSKAFSDPSNLRTHLKIHTGQKNYRC
.::..: ..: : :::: : : ::.::: :.:.::. :::: : .:::.:.:.:
XP_006 PFKCNQCGKSFNRSSVLHVHQRVHTGEKPYKCDECGKGFSQSSNLRIHQLVHTGEKSYKC
350 360 370 380 390 400
650 660 670 680 690 700
pF1KB4 TLCDKSFTQKAHLESHMVIHTGEKNLKCDYCDKLFMRRQDLKQHVLIHTQERQIKCPKCD
: :.:::...:. :. .::::: ::: : : : . .::. : .:: :. ::.:
XP_006 EDCGKGFTQRSNLQIHQRVHTGEKPYKCDDCGKDFSHSSDLRIHQRVHTGEKPYTCPECG
410 420 430 440 450 460
710 720 730 740 750 760
pF1KB4 KLFLRTNHLKKHLNSHEGKRDYVCEKCTKAYLTKYHLTRHLKTCKGPTSSSSAPEEEEED
: : ....:. : : :.. : ::.: :.. . :: : .. :
XP_006 KGFSKSSKLHTHQRVHTGEKPYKCEECGKGFSQRSHLLIHQRVHTGEKPYKCHDCGKGFS
470 480 490 500 510 520
770 780 790 800
pF1KB4 DSEEEDLADSVGTEDCRINSAVYSADESLSAHK
XP_006 HSSNLHIHQRVHTGEKPYQCAKCGKGFSHSSALRIHQRVHAGEKPYKCREYYKGFDHNSH
530 540 550 560 570 580
>>XP_011518659 (OMIM: 605015) PREDICTED: zinc finger pro (592 aa)
initn: 548 init1: 548 opt: 565 Z-score: 336.5 bits: 72.7 E(85289): 5.3e-12
Smith-Waterman score: 595; 31.6% identity (54.0% similar) in 376 aa overlap (404-754:158-508)
380 390 400 410 420 430
pF1KB4 TIWCTLCDRAYPSDCPEHGPVTFVPDTPIESRARLSLPKQ--LVLRQSIVGAEVGVWTGE
:: ::. :. :....: . .: :
XP_011 LETKTTQDYGREIYMSGSHGFQGGRYRLGISRKNLSMEKEQKLIVQHSYIPVE------E
130 140 150 160 170 180
440 450 460 470 480
pF1KB4 TIPVRTCFGPLIGQQSHSMEVAEWTDKAVNHIWKIYHNGVLEFCII----TTDENECNWM
..: . .: :.. . : . :. ::. . :.. :: :.
XP_011 ALPQ---YVGVICQEDLLRDSMEEKYCGCNKCKGIYYWN--SRCVFHKRNQPGENLCQ--
190 200 210 220 230
490 500 510 520 530 540
pF1KB4 MFVRKARNREEQNLVAYP--HDGKIFF-CTSQDIPPENELLFYYSRDYAQQIGVPEHPDV
. :: ....: .: : :: .. : : .. :. :: : :
XP_011 CSICKACFSQRSDLYRHPRNHIGKKLYGCDEVD------------GNFHQSSGVHFHQRV
240 250 260 270 280
550 560 570 580
pF1KB4 HL------CN-CGKECNSYTEFKAHLTSHIHNH---------LPTQGHSGSHGPSHSKER
:. :: ::: .. . .. : : ... : .. : : :.
XP_011 HIGEVPYSCNACGKSFSQISSLHNHQRVHTEEKFYKIECDKDLSRNSLLHIHQRLHIGEK
290 300 310 320 330 340
590 600 610 620 630 640
pF1KB4 KWKCSMCPQAFISPSKLHVHFMGHMGMKPHKCDFCSKAFSDPSNLRTHLKIHTGQKNYRC
.::..: ..: : :::: : : ::.::: :.:.::. :::: : .:::.:.:.:
XP_011 PFKCNQCGKSFNRSSVLHVHQRVHTGEKPYKCDECGKGFSQSSNLRIHQLVHTGEKSYKC
350 360 370 380 390 400
650 660 670 680 690 700
pF1KB4 TLCDKSFTQKAHLESHMVIHTGEKNLKCDYCDKLFMRRQDLKQHVLIHTQERQIKCPKCD
: :.:::...:. :. .::::: ::: : : : . .::. : .:: :. ::.:
XP_011 EDCGKGFTQRSNLQIHQRVHTGEKPYKCDDCGKDFSHSSDLRIHQRVHTGEKPYTCPECG
410 420 430 440 450 460
710 720 730 740 750 760
pF1KB4 KLFLRTNHLKKHLNSHEGKRDYVCEKCTKAYLTKYHLTRHLKTCKGPTSSSSAPEEEEED
: : ....:. : : :.. : ::.: :.. . :: : .. :
XP_011 KGFSKSSKLHTHQRVHTGEKPYKCEECGKGFSQRSHLLIHQRVHTGEKPYKCHDCGKGFS
470 480 490 500 510 520
770 780 790 800
pF1KB4 DSEEEDLADSVGTEDCRINSAVYSADESLSAHK
XP_011 HSSNLHIHQRVHTGEKPYQCAKCGKGFSHSSALRIHQRVHAGEKPYKCREYYKGFDHNSH
530 540 550 560 570 580
>>XP_005253185 (OMIM: 605015) PREDICTED: zinc finger pro (606 aa)
initn: 548 init1: 548 opt: 565 Z-score: 336.4 bits: 72.7 E(85289): 5.4e-12
Smith-Waterman score: 595; 31.6% identity (54.0% similar) in 376 aa overlap (404-754:172-522)
380 390 400 410 420 430
pF1KB4 TIWCTLCDRAYPSDCPEHGPVTFVPDTPIESRARLSLPKQ--LVLRQSIVGAEVGVWTGE
:: ::. :. :....: . .: :
XP_005 LETKTTQDYGREIYMSGSHGFQGGRYRLGISRKNLSMEKEQKLIVQHSYIPVE------E
150 160 170 180 190
440 450 460 470 480
pF1KB4 TIPVRTCFGPLIGQQSHSMEVAEWTDKAVNHIWKIYHNGVLEFCII----TTDENECNWM
..: . .: :.. . : . :. ::. . :.. :: :.
XP_005 ALPQ---YVGVICQEDLLRDSMEEKYCGCNKCKGIYYWN--SRCVFHKRNQPGENLCQ--
200 210 220 230 240
490 500 510 520 530 540
pF1KB4 MFVRKARNREEQNLVAYP--HDGKIFF-CTSQDIPPENELLFYYSRDYAQQIGVPEHPDV
. :: ....: .: : :: .. : : .. :. :: : :
XP_005 CSICKACFSQRSDLYRHPRNHIGKKLYGCDEVD------------GNFHQSSGVHFHQRV
250 260 270 280 290
550 560 570 580
pF1KB4 HL------CN-CGKECNSYTEFKAHLTSHIHNH---------LPTQGHSGSHGPSHSKER
:. :: ::: .. . .. : : ... : .. : : :.
XP_005 HIGEVPYSCNACGKSFSQISSLHNHQRVHTEEKFYKIECDKDLSRNSLLHIHQRLHIGEK
300 310 320 330 340 350
590 600 610 620 630 640
pF1KB4 KWKCSMCPQAFISPSKLHVHFMGHMGMKPHKCDFCSKAFSDPSNLRTHLKIHTGQKNYRC
.::..: ..: : :::: : : ::.::: :.:.::. :::: : .:::.:.:.:
XP_005 PFKCNQCGKSFNRSSVLHVHQRVHTGEKPYKCDECGKGFSQSSNLRIHQLVHTGEKSYKC
360 370 380 390 400 410
650 660 670 680 690 700
pF1KB4 TLCDKSFTQKAHLESHMVIHTGEKNLKCDYCDKLFMRRQDLKQHVLIHTQERQIKCPKCD
: :.:::...:. :. .::::: ::: : : : . .::. : .:: :. ::.:
XP_005 EDCGKGFTQRSNLQIHQRVHTGEKPYKCDDCGKDFSHSSDLRIHQRVHTGEKPYTCPECG
420 430 440 450 460 470
710 720 730 740 750 760
pF1KB4 KLFLRTNHLKKHLNSHEGKRDYVCEKCTKAYLTKYHLTRHLKTCKGPTSSSSAPEEEEED
: : ....:. : : :.. : ::.: :.. . :: : .. :
XP_005 KGFSKSSKLHTHQRVHTGEKPYKCEECGKGFSQRSHLLIHQRVHTGEKPYKCHDCGKGFS
480 490 500 510 520 530
770 780 790 800
pF1KB4 DSEEEDLADSVGTEDCRINSAVYSADESLSAHK
XP_005 HSSNLHIHQRVHTGEKPYQCAKCGKGFSHSSALRIHQRVHAGEKPYKCREYYKGFDHNSH
540 550 560 570 580 590
>>XP_006718371 (OMIM: 605015) PREDICTED: zinc finger pro (606 aa)
initn: 548 init1: 548 opt: 565 Z-score: 336.4 bits: 72.7 E(85289): 5.4e-12
Smith-Waterman score: 595; 31.6% identity (54.0% similar) in 376 aa overlap (404-754:172-522)
380 390 400 410 420 430
pF1KB4 TIWCTLCDRAYPSDCPEHGPVTFVPDTPIESRARLSLPKQ--LVLRQSIVGAEVGVWTGE
:: ::. :. :....: . .: :
XP_006 LETKTTQDYGREIYMSGSHGFQGGRYRLGISRKNLSMEKEQKLIVQHSYIPVE------E
150 160 170 180 190
440 450 460 470 480
pF1KB4 TIPVRTCFGPLIGQQSHSMEVAEWTDKAVNHIWKIYHNGVLEFCII----TTDENECNWM
..: . .: :.. . : . :. ::. . :.. :: :.
XP_006 ALPQ---YVGVICQEDLLRDSMEEKYCGCNKCKGIYYWN--SRCVFHKRNQPGENLCQ--
200 210 220 230 240
490 500 510 520 530 540
pF1KB4 MFVRKARNREEQNLVAYP--HDGKIFF-CTSQDIPPENELLFYYSRDYAQQIGVPEHPDV
. :: ....: .: : :: .. : : .. :. :: : :
XP_006 CSICKACFSQRSDLYRHPRNHIGKKLYGCDEVD------------GNFHQSSGVHFHQRV
250 260 270 280 290
550 560 570 580
pF1KB4 HL------CN-CGKECNSYTEFKAHLTSHIHNH---------LPTQGHSGSHGPSHSKER
:. :: ::: .. . .. : : ... : .. : : :.
XP_006 HIGEVPYSCNACGKSFSQISSLHNHQRVHTEEKFYKIECDKDLSRNSLLHIHQRLHIGEK
300 310 320 330 340 350
590 600 610 620 630 640
pF1KB4 KWKCSMCPQAFISPSKLHVHFMGHMGMKPHKCDFCSKAFSDPSNLRTHLKIHTGQKNYRC
.::..: ..: : :::: : : ::.::: :.:.::. :::: : .:::.:.:.:
XP_006 PFKCNQCGKSFNRSSVLHVHQRVHTGEKPYKCDECGKGFSQSSNLRIHQLVHTGEKSYKC
360 370 380 390 400 410
650 660 670 680 690 700
pF1KB4 TLCDKSFTQKAHLESHMVIHTGEKNLKCDYCDKLFMRRQDLKQHVLIHTQERQIKCPKCD
: :.:::...:. :. .::::: ::: : : : . .::. : .:: :. ::.:
XP_006 EDCGKGFTQRSNLQIHQRVHTGEKPYKCDDCGKDFSHSSDLRIHQRVHTGEKPYTCPECG
420 430 440 450 460 470
710 720 730 740 750 760
pF1KB4 KLFLRTNHLKKHLNSHEGKRDYVCEKCTKAYLTKYHLTRHLKTCKGPTSSSSAPEEEEED
: : ....:. : : :.. : ::.: :.. . :: : .. :
XP_006 KGFSKSSKLHTHQRVHTGEKPYKCEECGKGFSQRSHLLIHQRVHTGEKPYKCHDCGKGFS
480 490 500 510 520 530
770 780 790 800
pF1KB4 DSEEEDLADSVGTEDCRINSAVYSADESLSAHK
XP_006 HSSNLHIHQRVHTGEKPYQCAKCGKGFSHSSALRIHQRVHAGEKPYKCREYYKGFDHNSH
540 550 560 570 580 590
>>NP_037381 (OMIM: 605015) zinc finger protein 214 [Homo (606 aa)
initn: 548 init1: 548 opt: 565 Z-score: 336.4 bits: 72.7 E(85289): 5.4e-12
Smith-Waterman score: 595; 31.6% identity (54.0% similar) in 376 aa overlap (404-754:172-522)
380 390 400 410 420 430
pF1KB4 TIWCTLCDRAYPSDCPEHGPVTFVPDTPIESRARLSLPKQ--LVLRQSIVGAEVGVWTGE
:: ::. :. :....: . .: :
NP_037 LETKTTQDYGREIYMSGSHGFQGGRYRLGISRKNLSMEKEQKLIVQHSYIPVE------E
150 160 170 180 190
440 450 460 470 480
pF1KB4 TIPVRTCFGPLIGQQSHSMEVAEWTDKAVNHIWKIYHNGVLEFCII----TTDENECNWM
..: . .: :.. . : . :. ::. . :.. :: :.
NP_037 ALPQ---YVGVICQEDLLRDSMEEKYCGCNKCKGIYYWN--SRCVFHKRNQPGENLCQ--
200 210 220 230 240
490 500 510 520 530 540
pF1KB4 MFVRKARNREEQNLVAYP--HDGKIFF-CTSQDIPPENELLFYYSRDYAQQIGVPEHPDV
. :: ....: .: : :: .. : : .. :. :: : :
NP_037 CSICKACFSQRSDLYRHPRNHIGKKLYGCDEVD------------GNFHQSSGVHFHQRV
250 260 270 280 290
550 560 570 580
pF1KB4 HL------CN-CGKECNSYTEFKAHLTSHIHNH---------LPTQGHSGSHGPSHSKER
:. :: ::: .. . .. : : ... : .. : : :.
NP_037 HIGEVPYSCNACGKSFSQISSLHNHQRVHTEEKFYKIECDKDLSRNSLLHIHQRLHIGEK
300 310 320 330 340 350
590 600 610 620 630 640
pF1KB4 KWKCSMCPQAFISPSKLHVHFMGHMGMKPHKCDFCSKAFSDPSNLRTHLKIHTGQKNYRC
.::..: ..: : :::: : : ::.::: :.:.::. :::: : .:::.:.:.:
NP_037 PFKCNQCGKSFNRSSVLHVHQRVHTGEKPYKCDECGKGFSQSSNLRIHQLVHTGEKSYKC
360 370 380 390 400 410
650 660 670 680 690 700
pF1KB4 TLCDKSFTQKAHLESHMVIHTGEKNLKCDYCDKLFMRRQDLKQHVLIHTQERQIKCPKCD
: :.:::...:. :. .::::: ::: : : : . .::. : .:: :. ::.:
NP_037 EDCGKGFTQRSNLQIHQRVHTGEKPYKCDDCGKDFSHSSDLRIHQRVHTGEKPYTCPECG
420 430 440 450 460 470
710 720 730 740 750 760
pF1KB4 KLFLRTNHLKKHLNSHEGKRDYVCEKCTKAYLTKYHLTRHLKTCKGPTSSSSAPEEEEED
: : ....:. : : :.. : ::.: :.. . :: : .. :
NP_037 KGFSKSSKLHTHQRVHTGEKPYKCEECGKGFSQRSHLLIHQRVHTGEKPYKCHDCGKGFS
480 490 500 510 520 530
770 780 790 800
pF1KB4 DSEEEDLADSVGTEDCRINSAVYSADESLSAHK
NP_037 HSSNLHIHQRVHTGEKPYQCAKCGKGFSHSSALRIHQRVHAGEKPYKCREYYKGFDHNSH
540 550 560 570 580 590
801 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 15:40:18 2016 done: Thu Nov 3 15:40:20 2016
Total Scan time: 12.640 Total Display time: 0.170
Function used was FASTA [36.3.4 Apr, 2011]