Result of FASTA (omim) for
pF1KB4662
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB4662, 394 aa
1>>>pF1KB4662 394 - 394 aa - 394 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.8176+/-0.000418; mu= 19.2197+/- 0.026
mean_var=57.0272+/-11.761, 0's: 0 Z-trim(110.2): 48 B-trim: 0 in 0/50
Lambda= 0.169837
statistics sampled from 18516 (18564) to 18516 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.604), E-opt: 0.2 (0.218), width: 16
Scan time: 8.160
The best scores are: opt bits E(85289)
NP_005713 (OMIM: 604221) actin-related protein 2 i ( 394) 2603 646.3 3.7e-185
NP_001005386 (OMIM: 604221) actin-related protein ( 399) 2583 641.4 1.1e-183
NP_005150 (OMIM: 102540,612098,612794,613424) acti ( 377) 1115 281.7 2e-75
NP_001092 (OMIM: 102630,243310,607371,608578) acti ( 375) 1113 281.2 2.8e-75
NP_001186883 (OMIM: 102560,604717,614583) actin, c ( 375) 1110 280.5 4.7e-75
NP_001605 (OMIM: 102560,604717,614583) actin, cyto ( 375) 1110 280.5 4.7e-75
NP_001091 (OMIM: 102610,161800,255310,616852) acti ( 377) 1110 280.5 4.7e-75
NP_001606 (OMIM: 102545) actin, gamma-enteric smoo ( 376) 1101 278.3 2.2e-74
NP_001307784 (OMIM: 102620,611788,613834,614042) a ( 377) 1101 278.3 2.2e-74
NP_001604 (OMIM: 102620,611788,613834,614042) acti ( 377) 1101 278.3 2.2e-74
NP_001135417 (OMIM: 102620,611788,613834,614042) a ( 377) 1101 278.3 2.2e-74
XP_016859649 (OMIM: 608914) PREDICTED: POTE ankyri ( 657) 1088 275.2 3.1e-73
NP_001017992 (OMIM: 614835) beta-actin-like protei ( 376) 1084 274.1 3.9e-73
XP_011509518 (OMIM: 608914) PREDICTED: POTE ankyri ( 957) 1088 275.3 4.2e-73
XP_016859648 (OMIM: 608914) PREDICTED: POTE ankyri ( 967) 1088 275.3 4.2e-73
XP_016859650 (OMIM: 608914) PREDICTED: POTE ankyri (1075) 1088 275.4 4.6e-73
NP_001077007 (OMIM: 608914) POTE ankyrin domain fa (1075) 1088 275.4 4.6e-73
NP_005726 (OMIM: 605144) beta-centractin [Homo sap ( 376) 1012 256.5 7.9e-68
NP_005727 (OMIM: 605143) alpha-centractin [Homo sa ( 376) 1001 253.8 5.1e-67
XP_016858605 (OMIM: 605144) PREDICTED: beta-centra ( 332) 901 229.2 1.1e-59
NP_001186822 (OMIM: 102545) actin, gamma-enteric s ( 333) 837 213.6 5.8e-55
NP_115876 (OMIM: 608534) actin-related protein T3 ( 372) 837 213.6 6.3e-55
XP_005263911 (OMIM: 605144) PREDICTED: beta-centra ( 302) 833 212.5 1.1e-54
NP_612146 (OMIM: 300487) actin-related protein T1 ( 376) 810 207.0 6.3e-53
NP_536356 (OMIM: 608535) actin-related protein T2 ( 377) 806 206.0 1.2e-52
NP_006678 (OMIM: 604303) actin-like protein 7A [Ho ( 435) 742 190.3 7.3e-48
NP_006677 (OMIM: 604304) actin-like protein 7B [Ho ( 415) 707 181.8 2.7e-45
NP_005712 (OMIM: 604222) actin-related protein 3 i ( 418) 592 153.6 8.2e-37
NP_001264069 (OMIM: 604222) actin-related protein ( 367) 588 152.6 1.5e-36
NP_004292 (OMIM: 604958) actin-like protein 6A iso ( 429) 300 82.0 2.9e-15
NP_057272 (OMIM: 612458) actin-like protein 6B [Ho ( 426) 295 80.8 6.7e-15
NP_829888 (OMIM: 604958) actin-like protein 6A iso ( 387) 259 72.0 2.8e-12
NP_817126 (OMIM: 604958) actin-like protein 6A iso ( 387) 259 72.0 2.8e-12
>>NP_005713 (OMIM: 604221) actin-related protein 2 isofo (394 aa)
initn: 2603 init1: 2603 opt: 2603 Z-score: 3445.2 bits: 646.3 E(85289): 3.7e-185
Smith-Waterman score: 2603; 100.0% identity (100.0% similar) in 394 aa overlap (1-394:1-394)
10 20 30 40 50 60
pF1KB4 MDSQGRKVVVCDNGTGFVKCGYAGSNFPEHIFPALVGRPIIRSTTKVGNIEIKDLMVGDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 MDSQGRKVVVCDNGTGFVKCGYAGSNFPEHIFPALVGRPIIRSTTKVGNIEIKDLMVGDE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 ASELRSMLEVNYPMENGIVRNWDDMKHLWDYTFGPEKLNIDTRNCKILLTEPPMNPTKNR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 ASELRSMLEVNYPMENGIVRNWDDMKHLWDYTFGPEKLNIDTRNCKILLTEPPMNPTKNR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 EKIVEVMFETYQFSGVYVAIQAVLTLYAQGLLTGVVVDSGDGVTHICPVYEGFSLPHLTR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 EKIVEVMFETYQFSGVYVAIQAVLTLYAQGLLTGVVVDSGDGVTHICPVYEGFSLPHLTR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB4 RLDIAGRDITRYLIKLLLLRGYAFNHSADFETVRMIKEKLCYVGYNIEQEQKLALETTVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 RLDIAGRDITRYLIKLLLLRGYAFNHSADFETVRMIKEKLCYVGYNIEQEQKLALETTVL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB4 VESYTLPDGRIIKVGGERFEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRSEFYKH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 VESYTLPDGRIIKVGGERFEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRSEFYKH
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB4 IVLSGGSTMYPGLPSRLERELKQLYLERVLKGDVEKLSKFKIRIEDPPRRKHMVFLGGAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 IVLSGGSTMYPGLPSRLERELKQLYLERVLKGDVEKLSKFKIRIEDPPRRKHMVFLGGAV
310 320 330 340 350 360
370 380 390
pF1KB4 LADIMKDKDNFWMTRQEYQEKGVRVLEKLGVTVR
::::::::::::::::::::::::::::::::::
NP_005 LADIMKDKDNFWMTRQEYQEKGVRVLEKLGVTVR
370 380 390
>>NP_001005386 (OMIM: 604221) actin-related protein 2 is (399 aa)
initn: 2247 init1: 2247 opt: 2583 Z-score: 3418.7 bits: 641.4 E(85289): 1.1e-183
Smith-Waterman score: 2583; 98.7% identity (98.7% similar) in 399 aa overlap (1-394:1-399)
10 20 30 40 50
pF1KB4 MDSQGRKVVVCDNGTGFVKCGYAGSNFPEHIFPALVGRPIIRSTTKVGNIEIK-----DL
::::::::::::::::::::::::::::::::::::::::::::::::::::: ::
NP_001 MDSQGRKVVVCDNGTGFVKCGYAGSNFPEHIFPALVGRPIIRSTTKVGNIEIKNNKKMDL
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB4 MVGDEASELRSMLEVNYPMENGIVRNWDDMKHLWDYTFGPEKLNIDTRNCKILLTEPPMN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MVGDEASELRSMLEVNYPMENGIVRNWDDMKHLWDYTFGPEKLNIDTRNCKILLTEPPMN
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB4 PTKNREKIVEVMFETYQFSGVYVAIQAVLTLYAQGLLTGVVVDSGDGVTHICPVYEGFSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PTKNREKIVEVMFETYQFSGVYVAIQAVLTLYAQGLLTGVVVDSGDGVTHICPVYEGFSL
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB4 PHLTRRLDIAGRDITRYLIKLLLLRGYAFNHSADFETVRMIKEKLCYVGYNIEQEQKLAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PHLTRRLDIAGRDITRYLIKLLLLRGYAFNHSADFETVRMIKEKLCYVGYNIEQEQKLAL
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB4 ETTVLVESYTLPDGRIIKVGGERFEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ETTVLVESYTLPDGRIIKVGGERFEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRS
250 260 270 280 290 300
300 310 320 330 340 350
pF1KB4 EFYKHIVLSGGSTMYPGLPSRLERELKQLYLERVLKGDVEKLSKFKIRIEDPPRRKHMVF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EFYKHIVLSGGSTMYPGLPSRLERELKQLYLERVLKGDVEKLSKFKIRIEDPPRRKHMVF
310 320 330 340 350 360
360 370 380 390
pF1KB4 LGGAVLADIMKDKDNFWMTRQEYQEKGVRVLEKLGVTVR
:::::::::::::::::::::::::::::::::::::::
NP_001 LGGAVLADIMKDKDNFWMTRQEYQEKGVRVLEKLGVTVR
370 380 390
>>NP_005150 (OMIM: 102540,612098,612794,613424) actin, a (377 aa)
initn: 1187 init1: 819 opt: 1115 Z-score: 1475.1 bits: 281.7 E(85289): 2e-75
Smith-Waterman score: 1213; 46.8% identity (75.5% similar) in 387 aa overlap (2-388:3-374)
10 20 30 40 50
pF1KB4 MDSQGRKVVVCDNGTGFVKCGYAGSNFPEHIFPALVGRPIIRSTTKVGNIEIKDLMVGD
:.. ..:::::.:.:: :.::.. :. .::..:::: : . .. :: .:::
NP_005 MCDDEETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGD
10 20 30 40 50
60 70 80 90 100 110
pF1KB4 EASELRSMLEVNYPMENGIVRNWDDMKHLWDYTFGPEKLNIDTRNCKILLTEPPMNPTKN
::. :..: ..::.:.::. :::::...: .:: : : . .. :::: :.:: :
NP_005 EAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNE-LRVAPEEHPTLLTEAPLNPKAN
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB4 REKIVEVMFETYQFSGVYVAIQAVLTLYAQGLLTGVVVDSGDGVTHICPVYEGFSLPHLT
:::....::::.. ..::::::::.:::.: ::.:.:::::::: :.:::..:::
NP_005 REKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAI
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB4 RRLDIAGRDITRYLIKLLLLRGYAFNHSADFETVRMIKEKLCYVGYNIEQEQKLALETTV
:::.::::.: ::.:.: :::.: .:. : :: ::::::::. ..:.:. : ..
NP_005 MRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSS
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB4 LVESYTLPDGRIIKVGGERFEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRSEFYK
: .:: ::::..: .:.:::. ::.:::: .:..:..:. : .:.:. ::: :...:
NP_005 LEKSYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYA
240 250 260 270 280 290
300 310 320 330 340 350
pF1KB4 HIVLSGGSTMYPGLPSRLERELKQLYLERVLKGDVEKLSKFKIRIEDPPRRKHMVFLGGA
. :::::.:::::. .:...:. : : .::.: ::.::. :..::.
NP_005 NNVLSGGTTMYPGIADRMQKEITAL-----------APSTMKIKIIAPPERKYSVWIGGS
300 310 320 330 340
360 370 380 390
pF1KB4 VLADIMKDKDNFWMTRQEYQEKGVRVLEKLGVTVR
.::. .. ...:...:::.: : ....
NP_005 ILAS-LSTFQQMWISKQEYDEAGPSIVHRKCF
350 360 370
>>NP_001092 (OMIM: 102630,243310,607371,608578) actin, c (375 aa)
initn: 1183 init1: 835 opt: 1113 Z-score: 1472.5 bits: 281.2 E(85289): 2.8e-75
Smith-Waterman score: 1212; 47.2% identity (75.5% similar) in 388 aa overlap (1-388:1-372)
10 20 30 40 50 60
pF1KB4 MDSQGRKVVVCDNGTGFVKCGYAGSNFPEHIFPALVGRPIIRSTTKVGNIEIKDLMVGDE
::.. .:: :::.:. : :.::.. :. .::..:::: : . .. :: .::::
NP_001 MDDDIAALVV-DNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDE
10 20 30 40 50
70 80 90 100 110 120
pF1KB4 ASELRSMLEVNYPMENGIVRNWDDMKHLWDYTFGPEKLNIDTRNCKILLTEPPMNPTKNR
:. :..: ..::.:.::: :::::...: .:: : : . .. .:::: :.:: ::
NP_001 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANR
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB4 EKIVEVMFETYQFSGVYVAIQAVLTLYAQGLLTGVVVDSGDGVTHICPVYEGFSLPHLTR
::....::::.. ..::::::::.:::.: ::.:.:::::::: :.:::..:::
NP_001 EKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIL
120 130 140 150 160 170
190 200 210 220 230 240
pF1KB4 RLDIAGRDITRYLIKLLLLRGYAFNHSADFETVRMIKEKLCYVGYNIEQEQKLALETTVL
:::.::::.: ::.:.: :::.:. .:. : :: ::::::::. ..:::. : .. :
NP_001 RLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSL
180 190 200 210 220 230
250 260 270 280 290 300
pF1KB4 VESYTLPDGRIIKVGGERFEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRSEFYKH
.:: ::::..: .:.:::. ::::::: ....:. :. : ::.:. :.: :...: .
NP_001 EKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYAN
240 250 260 270 280 290
310 320 330 340 350 360
pF1KB4 IVLSGGSTMYPGLPSRLERELKQLYLERVLKGDVEKLSKFKIRIEDPPRRKHMVFLGGAV
:::::.:::::. .:...:. : : .::.: ::.::. :..::..
NP_001 TVLSGGTTMYPGIADRMQKEITAL-----------APSTMKIKIIAPPERKYSVWIGGSI
300 310 320 330 340
370 380 390
pF1KB4 LADIMKDKDNFWMTRQEYQEKGVRVLEKLGVTVR
::. .. ...:...:::.:.: ....
NP_001 LAS-LSTFQQMWISKQEYDESGPSIVHRKCF
350 360 370
>>NP_001186883 (OMIM: 102560,604717,614583) actin, cytop (375 aa)
initn: 1182 init1: 835 opt: 1110 Z-score: 1468.5 bits: 280.5 E(85289): 4.7e-75
Smith-Waterman score: 1209; 47.4% identity (75.8% similar) in 380 aa overlap (9-388:8-372)
10 20 30 40 50 60
pF1KB4 MDSQGRKVVVCDNGTGFVKCGYAGSNFPEHIFPALVGRPIIRSTTKVGNIEIKDLMVGDE
.: :::.:. : :.::.. :. .::..:::: : . .. :: .::::
NP_001 MEEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDE
10 20 30 40 50
70 80 90 100 110 120
pF1KB4 ASELRSMLEVNYPMENGIVRNWDDMKHLWDYTFGPEKLNIDTRNCKILLTEPPMNPTKNR
:. :..: ..::.:.::: :::::...: .:: : : . .. .:::: :.:: ::
NP_001 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANR
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB4 EKIVEVMFETYQFSGVYVAIQAVLTLYAQGLLTGVVVDSGDGVTHICPVYEGFSLPHLTR
::....::::.. ..::::::::.:::.: ::.:.:::::::: :.:::..:::
NP_001 EKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIL
120 130 140 150 160 170
190 200 210 220 230 240
pF1KB4 RLDIAGRDITRYLIKLLLLRGYAFNHSADFETVRMIKEKLCYVGYNIEQEQKLALETTVL
:::.::::.: ::.:.: :::.:. .:. : :: ::::::::. ..:::. : .. :
NP_001 RLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSL
180 190 200 210 220 230
250 260 270 280 290 300
pF1KB4 VESYTLPDGRIIKVGGERFEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRSEFYKH
.:: ::::..: .:.:::. ::::::: ....:. :. : ::.:. :.: :...: .
NP_001 EKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYAN
240 250 260 270 280 290
310 320 330 340 350 360
pF1KB4 IVLSGGSTMYPGLPSRLERELKQLYLERVLKGDVEKLSKFKIRIEDPPRRKHMVFLGGAV
:::::.:::::. .:...:. : : .::.: ::.::. :..::..
NP_001 TVLSGGTTMYPGIADRMQKEITAL-----------APSTMKIKIIAPPERKYSVWIGGSI
300 310 320 330 340
370 380 390
pF1KB4 LADIMKDKDNFWMTRQEYQEKGVRVLEKLGVTVR
::. .. ...:...:::.:.: ....
NP_001 LAS-LSTFQQMWISKQEYDESGPSIVHRKCF
350 360 370
>>NP_001605 (OMIM: 102560,604717,614583) actin, cytoplas (375 aa)
initn: 1182 init1: 835 opt: 1110 Z-score: 1468.5 bits: 280.5 E(85289): 4.7e-75
Smith-Waterman score: 1209; 47.4% identity (75.8% similar) in 380 aa overlap (9-388:8-372)
10 20 30 40 50 60
pF1KB4 MDSQGRKVVVCDNGTGFVKCGYAGSNFPEHIFPALVGRPIIRSTTKVGNIEIKDLMVGDE
.: :::.:. : :.::.. :. .::..:::: : . .. :: .::::
NP_001 MEEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDE
10 20 30 40 50
70 80 90 100 110 120
pF1KB4 ASELRSMLEVNYPMENGIVRNWDDMKHLWDYTFGPEKLNIDTRNCKILLTEPPMNPTKNR
:. :..: ..::.:.::: :::::...: .:: : : . .. .:::: :.:: ::
NP_001 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANR
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB4 EKIVEVMFETYQFSGVYVAIQAVLTLYAQGLLTGVVVDSGDGVTHICPVYEGFSLPHLTR
::....::::.. ..::::::::.:::.: ::.:.:::::::: :.:::..:::
NP_001 EKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIL
120 130 140 150 160 170
190 200 210 220 230 240
pF1KB4 RLDIAGRDITRYLIKLLLLRGYAFNHSADFETVRMIKEKLCYVGYNIEQEQKLALETTVL
:::.::::.: ::.:.: :::.:. .:. : :: ::::::::. ..:::. : .. :
NP_001 RLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSL
180 190 200 210 220 230
250 260 270 280 290 300
pF1KB4 VESYTLPDGRIIKVGGERFEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRSEFYKH
.:: ::::..: .:.:::. ::::::: ....:. :. : ::.:. :.: :...: .
NP_001 EKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYAN
240 250 260 270 280 290
310 320 330 340 350 360
pF1KB4 IVLSGGSTMYPGLPSRLERELKQLYLERVLKGDVEKLSKFKIRIEDPPRRKHMVFLGGAV
:::::.:::::. .:...:. : : .::.: ::.::. :..::..
NP_001 TVLSGGTTMYPGIADRMQKEITAL-----------APSTMKIKIIAPPERKYSVWIGGSI
300 310 320 330 340
370 380 390
pF1KB4 LADIMKDKDNFWMTRQEYQEKGVRVLEKLGVTVR
::. .. ...:...:::.:.: ....
NP_001 LAS-LSTFQQMWISKQEYDESGPSIVHRKCF
350 360 370
>>NP_001091 (OMIM: 102610,161800,255310,616852) actin, a (377 aa)
initn: 1185 init1: 817 opt: 1110 Z-score: 1468.5 bits: 280.5 E(85289): 4.7e-75
Smith-Waterman score: 1211; 46.8% identity (75.2% similar) in 387 aa overlap (2-388:3-374)
10 20 30 40 50
pF1KB4 MDSQGRKVVVCDNGTGFVKCGYAGSNFPEHIFPALVGRPIIRSTTKVGNIEIKDLMVGD
: . ..:::::.:.:: :.::.. :. .::..:::: : . .. :: .:::
NP_001 MCDEDETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGD
10 20 30 40 50
60 70 80 90 100 110
pF1KB4 EASELRSMLEVNYPMENGIVRNWDDMKHLWDYTFGPEKLNIDTRNCKILLTEPPMNPTKN
::. :..: ..::.:.::. :::::...: .:: : : . .. :::: :.:: :
NP_001 EAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNE-LRVAPEEHPTLLTEAPLNPKAN
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB4 REKIVEVMFETYQFSGVYVAIQAVLTLYAQGLLTGVVVDSGDGVTHICPVYEGFSLPHLT
:::....::::.. ..::::::::.:::.: ::.:.:::::::: :.:::..:::
NP_001 REKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAI
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB4 RRLDIAGRDITRYLIKLLLLRGYAFNHSADFETVRMIKEKLCYVGYNIEQEQKLALETTV
:::.::::.: ::.:.: :::.: .:. : :: ::::::::. ..:.:. : ..
NP_001 MRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSS
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB4 LVESYTLPDGRIIKVGGERFEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRSEFYK
: .:: ::::..: .:.:::. ::.:::: .:..:..:. : .:.:. ::: :...:
NP_001 LEKSYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYA
240 250 260 270 280 290
300 310 320 330 340 350
pF1KB4 HIVLSGGSTMYPGLPSRLERELKQLYLERVLKGDVEKLSKFKIRIEDPPRRKHMVFLGGA
. :.:::.:::::. .:...:. : : .::.: ::.::. :..::.
NP_001 NNVMSGGTTMYPGIADRMQKEITAL-----------APSTMKIKIIAPPERKYSVWIGGS
300 310 320 330 340
360 370 380 390
pF1KB4 VLADIMKDKDNFWMTRQEYQEKGVRVLEKLGVTVR
.::. .. ...:.:.:::.: : ....
NP_001 ILAS-LSTFQQMWITKQEYDEAGPSIVHRKCF
350 360 370
>>NP_001606 (OMIM: 102545) actin, gamma-enteric smooth m (376 aa)
initn: 1178 init1: 819 opt: 1101 Z-score: 1456.6 bits: 278.3 E(85289): 2.2e-74
Smith-Waterman score: 1191; 46.6% identity (75.3% similar) in 380 aa overlap (9-388:9-373)
10 20 30 40 50 60
pF1KB4 MDSQGRKVVVCDNGTGFVKCGYAGSNFPEHIFPALVGRPIIRSTTKVGNIEIKDLMVGDE
.:::::.:. : :.::.. :. .::..:::: : . .. :: .::::
NP_001 MCEEETTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDE
10 20 30 40 50
70 80 90 100 110 120
pF1KB4 ASELRSMLEVNYPMENGIVRNWDDMKHLWDYTFGPEKLNIDTRNCKILLTEPPMNPTKNR
:. :..: ..::.:.::. :::::...: ..: : : . .. :::: :.:: ::
NP_001 AQSKRGILTLKYPIEHGIITNWDDMEKIWHHSFYNE-LRVAPEEHPTLLTEAPLNPKANR
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB4 EKIVEVMFETYQFSGVYVAIQAVLTLYAQGLLTGVVVDSGDGVTHICPVYEGFSLPHLTR
::....::::.. ..::::::::.:::.: ::.:.:::::::: :.:::..:::
NP_001 EKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIM
120 130 140 150 160 170
190 200 210 220 230 240
pF1KB4 RLDIAGRDITRYLIKLLLLRGYAFNHSADFETVRMIKEKLCYVGYNIEQEQKLALETTVL
:::.::::.: ::.:.: :::.: .:. : :: ::::::::. ..:.:. : .. :
NP_001 RLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSL
180 190 200 210 220 230
250 260 270 280 290 300
pF1KB4 VESYTLPDGRIIKVGGERFEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRSEFYKH
.:: ::::..: .:.:::. ::.:::: .:..:..:. : .:.:. ::: :...: .
NP_001 EKSYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYAN
240 250 260 270 280 290
310 320 330 340 350 360
pF1KB4 IVLSGGSTMYPGLPSRLERELKQLYLERVLKGDVEKLSKFKIRIEDPPRRKHMVFLGGAV
:::::.:::::. .:...:. : : .::.: ::.::. :..::..
NP_001 NVLSGGTTMYPGIADRMQKEITAL-----------APSTMKIKIIAPPERKYSVWIGGSI
300 310 320 330 340
370 380 390
pF1KB4 LADIMKDKDNFWMTRQEYQEKGVRVLEKLGVTVR
::. .. ...:... ::.: : ....
NP_001 LAS-LSTFQQMWISKPEYDEAGPSIVHRKCF
350 360 370
>>NP_001307784 (OMIM: 102620,611788,613834,614042) actin (377 aa)
initn: 1178 init1: 819 opt: 1101 Z-score: 1456.6 bits: 278.3 E(85289): 2.2e-74
Smith-Waterman score: 1199; 46.8% identity (75.5% similar) in 380 aa overlap (9-388:10-374)
10 20 30 40 50
pF1KB4 MDSQGRKVVVCDNGTGFVKCGYAGSNFPEHIFPALVGRPIIRSTTKVGNIEIKDLMVGD
.:::::.:. : :.::.. :. .::..:::: : . .. :: .:::
NP_001 MCEEEDSTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGD
10 20 30 40 50
60 70 80 90 100 110
pF1KB4 EASELRSMLEVNYPMENGIVRNWDDMKHLWDYTFGPEKLNIDTRNCKILLTEPPMNPTKN
::. :..: ..::.:.::. :::::...: ..: : : . .. :::: :.:: :
NP_001 EAQSKRGILTLKYPIEHGIITNWDDMEKIWHHSFYNE-LRVAPEEHPTLLTEAPLNPKAN
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB4 REKIVEVMFETYQFSGVYVAIQAVLTLYAQGLLTGVVVDSGDGVTHICPVYEGFSLPHLT
:::....::::.. ..::::::::.:::.: ::.:.:::::::: :.:::..:::
NP_001 REKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAI
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB4 RRLDIAGRDITRYLIKLLLLRGYAFNHSADFETVRMIKEKLCYVGYNIEQEQKLALETTV
:::.::::.: ::.:.: :::.: .:. : :: ::::::::. ..:.:. : ..
NP_001 MRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSS
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB4 LVESYTLPDGRIIKVGGERFEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRSEFYK
: .:: ::::..: .:.:::. ::.:::: .:..:..:. : .:.:. ::: :...:
NP_001 LEKSYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYA
240 250 260 270 280 290
300 310 320 330 340 350
pF1KB4 HIVLSGGSTMYPGLPSRLERELKQLYLERVLKGDVEKLSKFKIRIEDPPRRKHMVFLGGA
. :::::.:::::. .:...:. : : .::.: ::.::. :..::.
NP_001 NNVLSGGTTMYPGIADRMQKEITAL-----------APSTMKIKIIAPPERKYSVWIGGS
300 310 320 330 340
360 370 380 390
pF1KB4 VLADIMKDKDNFWMTRQEYQEKGVRVLEKLGVTVR
.::. .. ...:...:::.: : ....
NP_001 ILAS-LSTFQQMWISKQEYDEAGPSIVHRKCF
350 360 370
>>NP_001604 (OMIM: 102620,611788,613834,614042) actin, a (377 aa)
initn: 1178 init1: 819 opt: 1101 Z-score: 1456.6 bits: 278.3 E(85289): 2.2e-74
Smith-Waterman score: 1199; 46.8% identity (75.5% similar) in 380 aa overlap (9-388:10-374)
10 20 30 40 50
pF1KB4 MDSQGRKVVVCDNGTGFVKCGYAGSNFPEHIFPALVGRPIIRSTTKVGNIEIKDLMVGD
.:::::.:. : :.::.. :. .::..:::: : . .. :: .:::
NP_001 MCEEEDSTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGD
10 20 30 40 50
60 70 80 90 100 110
pF1KB4 EASELRSMLEVNYPMENGIVRNWDDMKHLWDYTFGPEKLNIDTRNCKILLTEPPMNPTKN
::. :..: ..::.:.::. :::::...: ..: : : . .. :::: :.:: :
NP_001 EAQSKRGILTLKYPIEHGIITNWDDMEKIWHHSFYNE-LRVAPEEHPTLLTEAPLNPKAN
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB4 REKIVEVMFETYQFSGVYVAIQAVLTLYAQGLLTGVVVDSGDGVTHICPVYEGFSLPHLT
:::....::::.. ..::::::::.:::.: ::.:.:::::::: :.:::..:::
NP_001 REKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAI
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB4 RRLDIAGRDITRYLIKLLLLRGYAFNHSADFETVRMIKEKLCYVGYNIEQEQKLALETTV
:::.::::.: ::.:.: :::.: .:. : :: ::::::::. ..:.:. : ..
NP_001 MRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSS
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB4 LVESYTLPDGRIIKVGGERFEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRSEFYK
: .:: ::::..: .:.:::. ::.:::: .:..:..:. : .:.:. ::: :...:
NP_001 LEKSYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYA
240 250 260 270 280 290
300 310 320 330 340 350
pF1KB4 HIVLSGGSTMYPGLPSRLERELKQLYLERVLKGDVEKLSKFKIRIEDPPRRKHMVFLGGA
. :::::.:::::. .:...:. : : .::.: ::.::. :..::.
NP_001 NNVLSGGTTMYPGIADRMQKEITAL-----------APSTMKIKIIAPPERKYSVWIGGS
300 310 320 330 340
360 370 380 390
pF1KB4 VLADIMKDKDNFWMTRQEYQEKGVRVLEKLGVTVR
.::. .. ...:...:::.: : ....
NP_001 ILAS-LSTFQQMWISKQEYDEAGPSIVHRKCF
350 360 370
394 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 03:07:48 2016 done: Fri Nov 4 03:07:50 2016
Total Scan time: 8.160 Total Display time: 0.050
Function used was FASTA [36.3.4 Apr, 2011]