Result of FASTA (omim) for
pF1KB4501
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB4501, 198 aa
1>>>pF1KB4501 198 - 198 aa - 198 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.1038+/-0.000351; mu= 14.4306+/- 0.022
mean_var=63.2633+/-12.478, 0's: 0 Z-trim(113.1): 172 B-trim: 143 in 1/53
Lambda= 0.161250
statistics sampled from 22137 (22314) to 22137 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.641), E-opt: 0.2 (0.262), width: 16
Scan time: 5.560
The best scores are: opt bits E(85289)
XP_011508391 (OMIM: 607189) PREDICTED: regulator o ( 198) 1318 315.0 5e-86
XP_016858122 (OMIM: 607189) PREDICTED: regulator o ( 198) 1318 315.0 5e-86
XP_016858120 (OMIM: 607189) PREDICTED: regulator o ( 198) 1318 315.0 5e-86
XP_016858121 (OMIM: 607189) PREDICTED: regulator o ( 198) 1318 315.0 5e-86
XP_016858123 (OMIM: 607189) PREDICTED: regulator o ( 198) 1318 315.0 5e-86
NP_203131 (OMIM: 607189) regulator of G-protein si ( 198) 1318 315.0 5e-86
XP_011508393 (OMIM: 607189) PREDICTED: regulator o ( 178) 1175 281.7 4.7e-76
XP_016858126 (OMIM: 607189) PREDICTED: regulator o ( 180) 1135 272.4 3e-73
XP_016858124 (OMIM: 607189) PREDICTED: regulator o ( 180) 1135 272.4 3e-73
XP_011508392 (OMIM: 607189) PREDICTED: regulator o ( 180) 1135 272.4 3e-73
XP_005245612 (OMIM: 607189) PREDICTED: regulator o ( 180) 1135 272.4 3e-73
XP_016858125 (OMIM: 607189) PREDICTED: regulator o ( 180) 1135 272.4 3e-73
NP_001095920 (OMIM: 607189) regulator of G-protein ( 180) 1135 272.4 3e-73
NP_002919 (OMIM: 602514) regulator of G-protein si ( 202) 605 149.1 4.3e-36
NP_005604 (OMIM: 602516) regulator of G-protein si ( 205) 603 148.7 6.1e-36
XP_011517198 (OMIM: 602189) PREDICTED: regulator o ( 519) 607 149.8 6.8e-36
XP_016870494 (OMIM: 602189) PREDICTED: regulator o ( 519) 607 149.8 6.8e-36
XP_011517200 (OMIM: 602189) PREDICTED: regulator o ( 519) 607 149.8 6.8e-36
XP_011517202 (OMIM: 602189) PREDICTED: regulator o ( 519) 607 149.8 6.8e-36
XP_006717293 (OMIM: 602189) PREDICTED: regulator o ( 519) 607 149.8 6.8e-36
XP_006717289 (OMIM: 602189) PREDICTED: regulator o ( 519) 607 149.8 6.8e-36
NP_001263189 (OMIM: 602189) regulator of G-protein ( 519) 607 149.8 6.8e-36
XP_016870495 (OMIM: 602189) PREDICTED: regulator o ( 519) 607 149.8 6.8e-36
XP_011517203 (OMIM: 602189) PREDICTED: regulator o ( 519) 607 149.8 6.8e-36
XP_011517199 (OMIM: 602189) PREDICTED: regulator o ( 519) 607 149.8 6.8e-36
NP_001269851 (OMIM: 602189) regulator of G-protein ( 519) 607 149.8 6.8e-36
XP_006717288 (OMIM: 602189) PREDICTED: regulator o ( 521) 607 149.8 6.9e-36
NP_001309144 (OMIM: 602189) regulator of G-protein ( 537) 607 149.9 7e-36
XP_011517196 (OMIM: 602189) PREDICTED: regulator o ( 545) 607 149.9 7.1e-36
NP_001263190 (OMIM: 602189) regulator of G-protein ( 591) 607 149.9 7.6e-36
NP_001095915 (OMIM: 602516) regulator of G-protein ( 302) 603 148.8 8.3e-36
XP_006717285 (OMIM: 602189) PREDICTED: regulator o ( 824) 607 150.0 1e-35
NP_570613 (OMIM: 602189) regulator of G-protein si ( 917) 607 150.0 1.1e-35
XP_016870493 (OMIM: 602189) PREDICTED: regulator o ( 961) 607 150.0 1.1e-35
XP_006717283 (OMIM: 602189) PREDICTED: regulator o (1086) 607 150.0 1.3e-35
NP_001269852 (OMIM: 602189) regulator of G-protein (1088) 607 150.0 1.3e-35
XP_006717282 (OMIM: 602189) PREDICTED: regulator o (1094) 607 150.0 1.3e-35
XP_016870492 (OMIM: 602189) PREDICTED: regulator o (1157) 607 150.0 1.3e-35
NP_652759 (OMIM: 602189) regulator of G-protein si (1198) 607 150.1 1.4e-35
NP_001106851 (OMIM: 602516) regulator of G-protein ( 187) 592 146.1 3.3e-35
NP_652760 (OMIM: 602189) regulator of G-protein si ( 311) 591 146.0 5.9e-35
NP_003608 (OMIM: 145500,603276) regulator of G-pro ( 181) 585 144.5 1e-34
NP_001263191 (OMIM: 602189) regulator of G-protein ( 168) 579 143.0 2.5e-34
NP_602299 (OMIM: 602189) regulator of G-protein si ( 168) 579 143.0 2.5e-34
NP_001241678 (OMIM: 145500,603276) regulator of G- ( 185) 567 140.3 1.9e-33
NP_002914 (OMIM: 600861) regulator of G-protein si ( 211) 538 133.6 2.2e-31
NP_570138 (OMIM: 607192) regulator of G-protein si ( 235) 525 130.6 2e-30
NP_001034241 (OMIM: 612407) regulator of G-protein ( 152) 509 126.7 1.8e-29
NP_002913 (OMIM: 600323) regulator of G-protein si ( 209) 470 117.7 1.3e-26
NP_658912 (OMIM: 607190) regulator of G-protein si ( 159) 463 116.0 3.1e-26
>>XP_011508391 (OMIM: 607189) PREDICTED: regulator of G- (198 aa)
initn: 1318 init1: 1318 opt: 1318 Z-score: 1665.4 bits: 315.0 E(85289): 5e-86
Smith-Waterman score: 1318; 100.0% identity (100.0% similar) in 198 aa overlap (1-198:1-198)
10 20 30 40 50 60
pF1KB4 MWNTLTRSLSDHPVGKDPQAMRTGQRQNKGMRTRLGCLSHKSDSCSDFTAILPDKPNRAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MWNTLTRSLSDHPVGKDPQAMRTGQRQNKGMRTRLGCLSHKSDSCSDFTAILPDKPNRAL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 KRLSTEEATRWADSFDVLLSHKYGVAAFRAFLKTEFSEENLEFWLACEEFKKTRSTAKLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KRLSTEEATRWADSFDVLLSHKYGVAAFRAFLKTEFSEENLEFWLACEEFKKTRSTAKLV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 SKAHRIFEEFVDVQAPREVNIDFQTREATRKNLQEPSLTCFDQAQGKVHSLMEKDSYPRF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SKAHRIFEEFVDVQAPREVNIDFQTREATRKNLQEPSLTCFDQAQGKVHSLMEKDSYPRF
130 140 150 160 170 180
190
pF1KB4 LRSKMYLDLLSQSQRRLS
::::::::::::::::::
XP_011 LRSKMYLDLLSQSQRRLS
190
>>XP_016858122 (OMIM: 607189) PREDICTED: regulator of G- (198 aa)
initn: 1318 init1: 1318 opt: 1318 Z-score: 1665.4 bits: 315.0 E(85289): 5e-86
Smith-Waterman score: 1318; 100.0% identity (100.0% similar) in 198 aa overlap (1-198:1-198)
10 20 30 40 50 60
pF1KB4 MWNTLTRSLSDHPVGKDPQAMRTGQRQNKGMRTRLGCLSHKSDSCSDFTAILPDKPNRAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MWNTLTRSLSDHPVGKDPQAMRTGQRQNKGMRTRLGCLSHKSDSCSDFTAILPDKPNRAL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 KRLSTEEATRWADSFDVLLSHKYGVAAFRAFLKTEFSEENLEFWLACEEFKKTRSTAKLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KRLSTEEATRWADSFDVLLSHKYGVAAFRAFLKTEFSEENLEFWLACEEFKKTRSTAKLV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 SKAHRIFEEFVDVQAPREVNIDFQTREATRKNLQEPSLTCFDQAQGKVHSLMEKDSYPRF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SKAHRIFEEFVDVQAPREVNIDFQTREATRKNLQEPSLTCFDQAQGKVHSLMEKDSYPRF
130 140 150 160 170 180
190
pF1KB4 LRSKMYLDLLSQSQRRLS
::::::::::::::::::
XP_016 LRSKMYLDLLSQSQRRLS
190
>>XP_016858120 (OMIM: 607189) PREDICTED: regulator of G- (198 aa)
initn: 1318 init1: 1318 opt: 1318 Z-score: 1665.4 bits: 315.0 E(85289): 5e-86
Smith-Waterman score: 1318; 100.0% identity (100.0% similar) in 198 aa overlap (1-198:1-198)
10 20 30 40 50 60
pF1KB4 MWNTLTRSLSDHPVGKDPQAMRTGQRQNKGMRTRLGCLSHKSDSCSDFTAILPDKPNRAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MWNTLTRSLSDHPVGKDPQAMRTGQRQNKGMRTRLGCLSHKSDSCSDFTAILPDKPNRAL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 KRLSTEEATRWADSFDVLLSHKYGVAAFRAFLKTEFSEENLEFWLACEEFKKTRSTAKLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KRLSTEEATRWADSFDVLLSHKYGVAAFRAFLKTEFSEENLEFWLACEEFKKTRSTAKLV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 SKAHRIFEEFVDVQAPREVNIDFQTREATRKNLQEPSLTCFDQAQGKVHSLMEKDSYPRF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SKAHRIFEEFVDVQAPREVNIDFQTREATRKNLQEPSLTCFDQAQGKVHSLMEKDSYPRF
130 140 150 160 170 180
190
pF1KB4 LRSKMYLDLLSQSQRRLS
::::::::::::::::::
XP_016 LRSKMYLDLLSQSQRRLS
190
>>XP_016858121 (OMIM: 607189) PREDICTED: regulator of G- (198 aa)
initn: 1318 init1: 1318 opt: 1318 Z-score: 1665.4 bits: 315.0 E(85289): 5e-86
Smith-Waterman score: 1318; 100.0% identity (100.0% similar) in 198 aa overlap (1-198:1-198)
10 20 30 40 50 60
pF1KB4 MWNTLTRSLSDHPVGKDPQAMRTGQRQNKGMRTRLGCLSHKSDSCSDFTAILPDKPNRAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MWNTLTRSLSDHPVGKDPQAMRTGQRQNKGMRTRLGCLSHKSDSCSDFTAILPDKPNRAL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 KRLSTEEATRWADSFDVLLSHKYGVAAFRAFLKTEFSEENLEFWLACEEFKKTRSTAKLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KRLSTEEATRWADSFDVLLSHKYGVAAFRAFLKTEFSEENLEFWLACEEFKKTRSTAKLV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 SKAHRIFEEFVDVQAPREVNIDFQTREATRKNLQEPSLTCFDQAQGKVHSLMEKDSYPRF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SKAHRIFEEFVDVQAPREVNIDFQTREATRKNLQEPSLTCFDQAQGKVHSLMEKDSYPRF
130 140 150 160 170 180
190
pF1KB4 LRSKMYLDLLSQSQRRLS
::::::::::::::::::
XP_016 LRSKMYLDLLSQSQRRLS
190
>>XP_016858123 (OMIM: 607189) PREDICTED: regulator of G- (198 aa)
initn: 1318 init1: 1318 opt: 1318 Z-score: 1665.4 bits: 315.0 E(85289): 5e-86
Smith-Waterman score: 1318; 100.0% identity (100.0% similar) in 198 aa overlap (1-198:1-198)
10 20 30 40 50 60
pF1KB4 MWNTLTRSLSDHPVGKDPQAMRTGQRQNKGMRTRLGCLSHKSDSCSDFTAILPDKPNRAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MWNTLTRSLSDHPVGKDPQAMRTGQRQNKGMRTRLGCLSHKSDSCSDFTAILPDKPNRAL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 KRLSTEEATRWADSFDVLLSHKYGVAAFRAFLKTEFSEENLEFWLACEEFKKTRSTAKLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KRLSTEEATRWADSFDVLLSHKYGVAAFRAFLKTEFSEENLEFWLACEEFKKTRSTAKLV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 SKAHRIFEEFVDVQAPREVNIDFQTREATRKNLQEPSLTCFDQAQGKVHSLMEKDSYPRF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SKAHRIFEEFVDVQAPREVNIDFQTREATRKNLQEPSLTCFDQAQGKVHSLMEKDSYPRF
130 140 150 160 170 180
190
pF1KB4 LRSKMYLDLLSQSQRRLS
::::::::::::::::::
XP_016 LRSKMYLDLLSQSQRRLS
190
>>NP_203131 (OMIM: 607189) regulator of G-protein signal (198 aa)
initn: 1318 init1: 1318 opt: 1318 Z-score: 1665.4 bits: 315.0 E(85289): 5e-86
Smith-Waterman score: 1318; 100.0% identity (100.0% similar) in 198 aa overlap (1-198:1-198)
10 20 30 40 50 60
pF1KB4 MWNTLTRSLSDHPVGKDPQAMRTGQRQNKGMRTRLGCLSHKSDSCSDFTAILPDKPNRAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_203 MWNTLTRSLSDHPVGKDPQAMRTGQRQNKGMRTRLGCLSHKSDSCSDFTAILPDKPNRAL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 KRLSTEEATRWADSFDVLLSHKYGVAAFRAFLKTEFSEENLEFWLACEEFKKTRSTAKLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_203 KRLSTEEATRWADSFDVLLSHKYGVAAFRAFLKTEFSEENLEFWLACEEFKKTRSTAKLV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 SKAHRIFEEFVDVQAPREVNIDFQTREATRKNLQEPSLTCFDQAQGKVHSLMEKDSYPRF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_203 SKAHRIFEEFVDVQAPREVNIDFQTREATRKNLQEPSLTCFDQAQGKVHSLMEKDSYPRF
130 140 150 160 170 180
190
pF1KB4 LRSKMYLDLLSQSQRRLS
::::::::::::::::::
NP_203 LRSKMYLDLLSQSQRRLS
190
>>XP_011508393 (OMIM: 607189) PREDICTED: regulator of G- (178 aa)
initn: 1175 init1: 1175 opt: 1175 Z-score: 1486.3 bits: 281.7 E(85289): 4.7e-76
Smith-Waterman score: 1175; 100.0% identity (100.0% similar) in 178 aa overlap (21-198:1-178)
10 20 30 40 50 60
pF1KB4 MWNTLTRSLSDHPVGKDPQAMRTGQRQNKGMRTRLGCLSHKSDSCSDFTAILPDKPNRAL
::::::::::::::::::::::::::::::::::::::::
XP_011 MRTGQRQNKGMRTRLGCLSHKSDSCSDFTAILPDKPNRAL
10 20 30 40
70 80 90 100 110 120
pF1KB4 KRLSTEEATRWADSFDVLLSHKYGVAAFRAFLKTEFSEENLEFWLACEEFKKTRSTAKLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KRLSTEEATRWADSFDVLLSHKYGVAAFRAFLKTEFSEENLEFWLACEEFKKTRSTAKLV
50 60 70 80 90 100
130 140 150 160 170 180
pF1KB4 SKAHRIFEEFVDVQAPREVNIDFQTREATRKNLQEPSLTCFDQAQGKVHSLMEKDSYPRF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SKAHRIFEEFVDVQAPREVNIDFQTREATRKNLQEPSLTCFDQAQGKVHSLMEKDSYPRF
110 120 130 140 150 160
190
pF1KB4 LRSKMYLDLLSQSQRRLS
::::::::::::::::::
XP_011 LRSKMYLDLLSQSQRRLS
170
>>XP_016858126 (OMIM: 607189) PREDICTED: regulator of G- (180 aa)
initn: 1135 init1: 1135 opt: 1135 Z-score: 1436.0 bits: 272.4 E(85289): 3e-73
Smith-Waterman score: 1135; 99.4% identity (100.0% similar) in 173 aa overlap (26-198:8-180)
10 20 30 40 50 60
pF1KB4 MWNTLTRSLSDHPVGKDPQAMRTGQRQNKGMRTRLGCLSHKSDSCSDFTAILPDKPNRAL
:.:::::::::::::::::::::::::::::::::
XP_016 MAALLMPRRNKGMRTRLGCLSHKSDSCSDFTAILPDKPNRAL
10 20 30 40
70 80 90 100 110 120
pF1KB4 KRLSTEEATRWADSFDVLLSHKYGVAAFRAFLKTEFSEENLEFWLACEEFKKTRSTAKLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KRLSTEEATRWADSFDVLLSHKYGVAAFRAFLKTEFSEENLEFWLACEEFKKTRSTAKLV
50 60 70 80 90 100
130 140 150 160 170 180
pF1KB4 SKAHRIFEEFVDVQAPREVNIDFQTREATRKNLQEPSLTCFDQAQGKVHSLMEKDSYPRF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SKAHRIFEEFVDVQAPREVNIDFQTREATRKNLQEPSLTCFDQAQGKVHSLMEKDSYPRF
110 120 130 140 150 160
190
pF1KB4 LRSKMYLDLLSQSQRRLS
::::::::::::::::::
XP_016 LRSKMYLDLLSQSQRRLS
170 180
>>XP_016858124 (OMIM: 607189) PREDICTED: regulator of G- (180 aa)
initn: 1135 init1: 1135 opt: 1135 Z-score: 1436.0 bits: 272.4 E(85289): 3e-73
Smith-Waterman score: 1135; 99.4% identity (100.0% similar) in 173 aa overlap (26-198:8-180)
10 20 30 40 50 60
pF1KB4 MWNTLTRSLSDHPVGKDPQAMRTGQRQNKGMRTRLGCLSHKSDSCSDFTAILPDKPNRAL
:.:::::::::::::::::::::::::::::::::
XP_016 MAALLMPRRNKGMRTRLGCLSHKSDSCSDFTAILPDKPNRAL
10 20 30 40
70 80 90 100 110 120
pF1KB4 KRLSTEEATRWADSFDVLLSHKYGVAAFRAFLKTEFSEENLEFWLACEEFKKTRSTAKLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KRLSTEEATRWADSFDVLLSHKYGVAAFRAFLKTEFSEENLEFWLACEEFKKTRSTAKLV
50 60 70 80 90 100
130 140 150 160 170 180
pF1KB4 SKAHRIFEEFVDVQAPREVNIDFQTREATRKNLQEPSLTCFDQAQGKVHSLMEKDSYPRF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SKAHRIFEEFVDVQAPREVNIDFQTREATRKNLQEPSLTCFDQAQGKVHSLMEKDSYPRF
110 120 130 140 150 160
190
pF1KB4 LRSKMYLDLLSQSQRRLS
::::::::::::::::::
XP_016 LRSKMYLDLLSQSQRRLS
170 180
>>XP_011508392 (OMIM: 607189) PREDICTED: regulator of G- (180 aa)
initn: 1135 init1: 1135 opt: 1135 Z-score: 1436.0 bits: 272.4 E(85289): 3e-73
Smith-Waterman score: 1135; 99.4% identity (100.0% similar) in 173 aa overlap (26-198:8-180)
10 20 30 40 50 60
pF1KB4 MWNTLTRSLSDHPVGKDPQAMRTGQRQNKGMRTRLGCLSHKSDSCSDFTAILPDKPNRAL
:.:::::::::::::::::::::::::::::::::
XP_011 MAALLMPRRNKGMRTRLGCLSHKSDSCSDFTAILPDKPNRAL
10 20 30 40
70 80 90 100 110 120
pF1KB4 KRLSTEEATRWADSFDVLLSHKYGVAAFRAFLKTEFSEENLEFWLACEEFKKTRSTAKLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KRLSTEEATRWADSFDVLLSHKYGVAAFRAFLKTEFSEENLEFWLACEEFKKTRSTAKLV
50 60 70 80 90 100
130 140 150 160 170 180
pF1KB4 SKAHRIFEEFVDVQAPREVNIDFQTREATRKNLQEPSLTCFDQAQGKVHSLMEKDSYPRF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SKAHRIFEEFVDVQAPREVNIDFQTREATRKNLQEPSLTCFDQAQGKVHSLMEKDSYPRF
110 120 130 140 150 160
190
pF1KB4 LRSKMYLDLLSQSQRRLS
::::::::::::::::::
XP_011 LRSKMYLDLLSQSQRRLS
170 180
198 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 05:52:23 2016 done: Sat Nov 5 05:52:24 2016
Total Scan time: 5.560 Total Display time: -0.030
Function used was FASTA [36.3.4 Apr, 2011]