Result of FASTA (omim) for
pF1KB4380
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB4380, 391 aa
1>>>pF1KB4380 391 - 391 aa - 391 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.4687+/-0.000352; mu= 13.8046+/- 0.023
mean_var=153.9263+/-32.703, 0's: 0 Z-trim(118.9): 747 B-trim: 1384 in 1/57
Lambda= 0.103376
statistics sampled from 31443 (32292) to 31443 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.708), E-opt: 0.2 (0.379), width: 16
Scan time: 9.000
The best scores are: opt bits E(85289)
NP_001040 (OMIM: 182451) somatostatin receptor typ ( 391) 2580 396.4 6e-110
NP_001043 (OMIM: 182454) somatostatin receptor typ ( 388) 1463 229.8 8.5e-60
NP_001041 (OMIM: 182452) somatostatin receptor typ ( 369) 1143 182.1 1.9e-45
NP_001166031 (OMIM: 182455) somatostatin receptor ( 364) 1087 173.7 6.2e-43
NP_001044 (OMIM: 182455) somatostatin receptor typ ( 364) 1087 173.7 6.2e-43
XP_016884412 (OMIM: 182453) PREDICTED: somatostati ( 418) 1049 168.1 3.4e-41
NP_001042 (OMIM: 182453) somatostatin receptor typ ( 418) 1049 168.1 3.4e-41
XP_016884413 (OMIM: 182453) PREDICTED: somatostati ( 418) 1049 168.1 3.4e-41
XP_005261778 (OMIM: 182453) PREDICTED: somatostati ( 418) 1049 168.1 3.4e-41
XP_006724374 (OMIM: 182453) PREDICTED: somatostati ( 418) 1049 168.1 3.4e-41
NP_001265616 (OMIM: 182453) somatostatin receptor ( 418) 1049 168.1 3.4e-41
XP_011528651 (OMIM: 182453) PREDICTED: somatostati ( 418) 1049 168.1 3.4e-41
NP_000905 (OMIM: 600018) mu-type opioid receptor i ( 400) 923 149.3 1.5e-35
NP_001272453 (OMIM: 600018) mu-type opioid recepto ( 493) 923 149.4 1.7e-35
NP_001138751 (OMIM: 600018) mu-type opioid recepto ( 493) 923 149.4 1.7e-35
NP_001138757 (OMIM: 600018) mu-type opioid recepto ( 389) 917 148.4 2.8e-35
NP_001008504 (OMIM: 600018) mu-type opioid recepto ( 392) 917 148.4 2.8e-35
NP_001138755 (OMIM: 600018) mu-type opioid recepto ( 397) 917 148.4 2.8e-35
NP_001138756 (OMIM: 600018) mu-type opioid recepto ( 403) 917 148.4 2.8e-35
NP_001138754 (OMIM: 600018) mu-type opioid recepto ( 406) 917 148.4 2.8e-35
NP_001272452 (OMIM: 600018) mu-type opioid recepto ( 414) 917 148.4 2.9e-35
NP_001008503 (OMIM: 600018) mu-type opioid recepto ( 418) 917 148.4 2.9e-35
NP_001138758 (OMIM: 600018) mu-type opioid recepto ( 420) 917 148.4 2.9e-35
NP_001008505 (OMIM: 600018) mu-type opioid recepto ( 446) 917 148.5 3e-35
NP_000902 (OMIM: 165195) delta-type opioid recepto ( 372) 890 144.3 4.4e-34
NP_000903 (OMIM: 165196) kappa-type opioid recepto ( 380) 878 142.6 1.5e-33
NP_001305426 (OMIM: 165196) kappa-type opioid rece ( 409) 878 142.6 1.6e-33
NP_872588 (OMIM: 602548) nociceptin receptor isofo ( 370) 841 137.0 6.9e-32
XP_016883343 (OMIM: 602548) PREDICTED: nociceptin ( 370) 841 137.0 6.9e-32
NP_000904 (OMIM: 602548) nociceptin receptor isofo ( 370) 841 137.0 6.9e-32
NP_001186948 (OMIM: 602548) nociceptin receptor is ( 370) 841 137.0 6.9e-32
XP_016883342 (OMIM: 602548) PREDICTED: nociceptin ( 388) 841 137.1 7.1e-32
XP_011527130 (OMIM: 602548) PREDICTED: nociceptin ( 388) 841 137.1 7.1e-32
XP_016883341 (OMIM: 602548) PREDICTED: nociceptin ( 388) 841 137.1 7.1e-32
NP_001305782 (OMIM: 602548) nociceptin receptor is ( 399) 841 137.1 7.3e-32
NP_005277 (OMIM: 600731) neuropeptides B/W recepto ( 333) 804 131.5 2.9e-30
XP_016883344 (OMIM: 602548) PREDICTED: nociceptin ( 365) 791 129.6 1.2e-29
NP_001305783 (OMIM: 602548) nociceptin receptor is ( 365) 791 129.6 1.2e-29
NP_001138753 (OMIM: 600018) mu-type opioid recepto ( 319) 781 128.0 3.1e-29
NP_005276 (OMIM: 600730) neuropeptides B/W recepto ( 328) 780 127.9 3.5e-29
XP_016866395 (OMIM: 600018) PREDICTED: mu-type opi ( 300) 760 124.9 2.6e-28
NP_001138752 (OMIM: 600018) mu-type opioid recepto ( 300) 760 124.9 2.6e-28
NP_001138759 (OMIM: 600018) mu-type opioid recepto ( 300) 760 124.9 2.6e-28
NP_001272455 (OMIM: 600018) mu-type opioid recepto ( 300) 760 124.9 2.6e-28
NP_001272456 (OMIM: 600018) mu-type opioid recepto ( 292) 754 124.0 4.7e-28
NP_001272457 (OMIM: 600018) mu-type opioid recepto ( 314) 754 124.0 5e-28
XP_011534164 (OMIM: 600018) PREDICTED: mu-type opi ( 346) 754 124.0 5.3e-28
XP_011534158 (OMIM: 600018) PREDICTED: mu-type opi ( 346) 754 124.0 5.3e-28
XP_011534153 (OMIM: 600018) PREDICTED: mu-type opi ( 346) 754 124.0 5.3e-28
XP_016866392 (OMIM: 600018) PREDICTED: mu-type opi ( 346) 754 124.0 5.3e-28
>>NP_001040 (OMIM: 182451) somatostatin receptor type 1 (391 aa)
initn: 2580 init1: 2580 opt: 2580 Z-score: 2094.8 bits: 396.4 E(85289): 6e-110
Smith-Waterman score: 2580; 100.0% identity (100.0% similar) in 391 aa overlap (1-391:1-391)
10 20 30 40 50 60
pF1KB4 MFPNGTASSPSSSPSPSPGSCGEGGGSRGPGAGAADGMEEPGRNASQNGTLSEGQGSAIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MFPNGTASSPSSSPSPSPGSCGEGGGSRGPGAGAADGMEEPGRNASQNGTLSEGQGSAIL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 ISFIYSVVCLVGLCGNSMVIYVILRYAKMKTATNIYILNLAIADELLMLSVPFLVTSTLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ISFIYSVVCLVGLCGNSMVIYVILRYAKMKTATNIYILNLAIADELLMLSVPFLVTSTLL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 RHWPFGALLCRLVLSVDAVNMFTSIYCLTVLSVDRYVAVVHPIKAARYRRPTVAKVVNLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RHWPFGALLCRLVLSVDAVNMFTSIYCLTVLSVDRYVAVVHPIKAARYRRPTVAKVVNLG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB4 VWVLSLLVILPIVVFSRTAANSDGTVACNMLMPEPAQRWLVGFVLYTFLMGFLLPVGAIC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VWVLSLLVILPIVVFSRTAANSDGTVACNMLMPEPAQRWLVGFVLYTFLMGFLLPVGAIC
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB4 LCYVLIIAKMRMVALKAGWQQRKRSERKITLMVMMVVMVFVICWMPFYVVQLVNVFAEQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LCYVLIIAKMRMVALKAGWQQRKRSERKITLMVMMVVMVFVICWMPFYVVQLVNVFAEQD
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB4 DATVSQLSVILGYANSCANPILYGFLSDNFKRSFQRILCLSWMDNAAEEPVDYYATALKS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DATVSQLSVILGYANSCANPILYGFLSDNFKRSFQRILCLSWMDNAAEEPVDYYATALKS
310 320 330 340 350 360
370 380 390
pF1KB4 RAYSVEDFQPENLESGGVFRNGTCTSRITTL
:::::::::::::::::::::::::::::::
NP_001 RAYSVEDFQPENLESGGVFRNGTCTSRITTL
370 380 390
>>NP_001043 (OMIM: 182454) somatostatin receptor type 4 (388 aa)
initn: 1408 init1: 709 opt: 1463 Z-score: 1194.6 bits: 229.8 E(85289): 8.5e-60
Smith-Waterman score: 1463; 62.9% identity (83.4% similar) in 356 aa overlap (12-361:2-354)
10 20 30 40 50 60
pF1KB4 MFPNGTASSPSSSPSPSPGSCGEGGGSRGPGAGAADGMEEPGRNASQNGTLSEGQGSAIL
:.:: : . :: :. :.:. :.. ...: . ... : .
NP_001 MSAPSTLPPGGEEGLGTAWPSAANASSAPAEAEEAVAGPGDARAAG-MVA
10 20 30 40
70 80 90 100 110 120
pF1KB4 ISFIYSVVCLVGLCGNSMVIYVILRYAKMKTATNIYILNLAIADELLMLSVPFLVTSTLL
:. ::..:::::: ::..::.:::::::::::::::.::::.::::.::::::...:. :
NP_001 IQCIYALVCLVGLVGNALVIFVILRYAKMKTATNIYLLNLAVADELFMLSVPFVASSAAL
50 60 70 80 90 100
130 140 150 160 170 180
pF1KB4 RHWPFGALLCRLVLSVDAVNMFTSIYCLTVLSVDRYVAVVHPIKAARYRRPTVAKVVNLG
::::::..::: :::::..:::::..::::::::::::::::..:: ::::.:::..:::
NP_001 RHWPFGSVLCRAVLSVDGLNMFTSVFCLTVLSVDRYVAVVHPLRAATYRRPSVAKLINLG
110 120 130 140 150 160
190 200 210 220 230
pF1KB4 VWVLSLLVILPIVVFSRTAANSDG-TVACNMLMPEPAQRWLVGFVLYTFLMGFLLPVGAI
::. :::: :::..:. : : .::::. :.:: : . ::.::::.:::::: ::
NP_001 VWLASLLVTLPIAIFADTRPARGGQAVACNLQWPHPA--WSAVFVVYTFLLGFLLPVLAI
170 180 190 200 210 220
240 250 260 270 280 290
pF1KB4 CLCYVLIIAKMRMVALKAGWQQRKRSERKITLMVMMVVMVFVICWMPFYVVQLVNVFAEQ
:::.::..::: :::.::::::.:::.::: .:.:::.:::.::::::::::.:.:. .
NP_001 GLCYLLIVGKMRAVALRAGWQQRRRSEKKITRLVLMVVVVFVLCWMPFYVVQLLNLFVTS
230 240 250 260 270 280
300 310 320 330 340 350
pF1KB4 DDATVSQLSVILGYANSCANPILYGFLSDNFKRSFQRILCLS-----WMDNAAEEPVDYY
::::...:.::.::::::::::::::::::.: :::.::: .: :::.:::
NP_001 LDATVNHVSLILSYANSCANPILYGFLSDNFRRFFQRVLCLRCCLLEGAGGAEEEPLDYY
290 300 310 320 330 340
360 370 380 390
pF1KB4 ATALKSRAYSVEDFQPENLESGGVFRNGTCTSRITTL
::::::.
NP_001 ATALKSKGGAGCMCPPLPCQQEALQPEPGRKRIPLTRTTTF
350 360 370 380
>>NP_001041 (OMIM: 182452) somatostatin receptor type 2 (369 aa)
initn: 1158 init1: 986 opt: 1143 Z-score: 936.9 bits: 182.1 E(85289): 1.9e-45
Smith-Waterman score: 1143; 55.6% identity (83.3% similar) in 288 aa overlap (57-340:42-329)
30 40 50 60 70 80
pF1KB4 SRGPGAGAADGMEEPGRNASQNGTLSEGQGSAILISFIYSVVCLVGLCGNSMVIYVILRY
: ...::: :::..:::::..::::::::
NP_001 HTWLSIPFDLNGSVVSTNTSNQTEPYYDLTSNAVLTFIYFVVCIIGLCGNTLVIYVILRY
20 30 40 50 60 70
90 100 110 120 130 140
pF1KB4 AKMKTATNIYILNLAIADELLMLSVPFLVTSTLLRHWPFGALLCRLVLSVDAVNMFTSIY
::::: ::::::::::::::.::..:::. .. : ::::: .::.:..::..:.::::.
NP_001 AKMKTITNIYILNLAIADELFMLGLPFLAMQVALVHWPFGKAICRVVMTVDGINQFTSIF
80 90 100 110 120 130
150 160 170 180 190 200
pF1KB4 CLTVLSVDRYVAVVHPIKAARYRRPTVAKVVNLGVWVLSLLVILPIVVFSRTAANSDGTV
::::.:.:::.:::::::.:..::: .::.....:: .::::::::.... .:. :
NP_001 CLTVMSIDRYLAVVHPIKSAKWRRPRTAKMITMAVWGVSLLVILPIMIYAGLRSNQWGRS
140 150 160 170 180 190
210 220 230 240 250 260
pF1KB4 ACNMLMPEPAQRWLVGFVLYTFLMGFLLPVGAICLCYVLIIAKMRMVALKAGWQQRKRSE
.:.. : . : .::..:::..:::.:. :::::..:: :.. ....: ..::.::
NP_001 SCTINWPGESGAWYTGFIIYTFILGFLVPLTIICLCYLFIIIKVKSSGIRVGSSKRKKSE
200 210 220 230 240 250
270 280 290 300 310 320
pF1KB4 RKITLMVMMVVMVFVICWMPFYV--VQLVNVFAEQDDATVSQLS--VILGYANSCANPIL
.:.: :: .:: ::..::.:::. :. :.. : .... :.: ::::::::::
NP_001 KKVTRMVSIVVAVFIFCWLPFYIFNVSSVSMAISPTPALKGMFDFVVVLTYANSCANPIL
260 270 280 290 300 310
330 340 350 360 370 380
pF1KB4 YGFLSDNFKRSFQRILCLSWMDNAAEEPVDYYATALKSRAYSVEDFQPENLESGGVFRNG
:.:::::::.::: .:::
NP_001 YAFLSDNFKKSFQNVLCLVKVSGTDDGERSDSKQDKSRLNETTETQRTLLNGDLQTSI
320 330 340 350 360
>>NP_001166031 (OMIM: 182455) somatostatin receptor type (364 aa)
initn: 1145 init1: 594 opt: 1087 Z-score: 891.8 bits: 173.7 E(85289): 6.2e-43
Smith-Waterman score: 1091; 49.9% identity (75.6% similar) in 349 aa overlap (10-350:6-335)
10 20 30 40 50 60
pF1KB4 MFPNGTASSPSSSPSPSPGSCGEGGGSRGPGAGAADGMEEPGRNASQNGTLSEGQGSAIL
:.:.:: . .: ::: :. : : : . : . . :.:
NP_001 MEPLFPASTPSWNASS---------PGA-ASGG----GDNRTLVGPAPSAGARAVL
10 20 30 40
70 80 90 100 110 120
pF1KB4 ISFIYSVVCLVGLCGNSMVIYVILRYAKMKTATNIYILNLAIADELLMLSVPFLVTSTLL
. .: .:: .:: ::..::::.::.:::::.:::::::::.:: : ::..:::.:..
NP_001 VPVLYLLVCAAGLGGNTLVIYVVLRFAKMKTVTNIYILNLAVADVLYMLGLPFLATQNAA
50 60 70 80 90 100
130 140 150 160 170 180
pF1KB4 RHWPFGALLCRLVLSVDAVNMFTSIYCLTVLSVDRYVAVVHPIKAARYRRPTVAKVVNLG
:::: .:::::...:.::.:::..::::.:::::.:::::...::.::: :::... .
NP_001 SFWPFGPVLCRLVMTLDGVNQFTSVFCLTVMSVDRYLAVVHPLSSARWRRPRVAKLASAA
110 120 130 140 150 160
190 200 210 220 230 240
pF1KB4 VWVLSLLVILPIVVFSRTAANSDGTVACNMLMPEPAQRWLVGFVLYTFLMGFLLPVGAIC
.::::: . ::..::. . . :: :: :::. : . :..:: ..::. :. .::
NP_001 AWVLSLCMSLPLLVFADV--QEGGT--CNASWPEPVGLWGAVFIIYTAVLGFFAPLLVIC
170 180 190 200 210
250 260 270 280 290
pF1KB4 LCYVLIIAKMRMVALKAGWQQRKRSERKITLMVMMVVMVFVICWMPFYVVQLVN--VFAE
:::.::..:.: .....: :.:::::.: ::..::.::. ::.::..:..:: :
NP_001 LCYLLIVVKVRAAGVRVG-CVRRRSERKVTRMVLVVVLVFAGCWLPFFTVNIVNLAVALP
220 230 240 250 260 270
300 310 320 330 340 350
pF1KB4 QDDATVSQ--LSVILGYANSCANPILYGFLSDNFKRSFQRILCL----SWMDNAAEEPVD
:. :... . :::.::::::::.:::::::::..:::..::: . : : ::
NP_001 QEPASAGLYFFVVILSYANSCANPVLYGFLSDNFRQSFQKVLCLRKGSGAKDADATEPRP
280 290 300 310 320 330
360 370 380 390
pF1KB4 YYATALKSRAYSVEDFQPENLESGGVFRNGTCTSRITTL
NP_001 DRIRQQQEATPPAHRAAANGLMQTSKL
340 350 360
>>NP_001044 (OMIM: 182455) somatostatin receptor type 5 (364 aa)
initn: 1145 init1: 594 opt: 1087 Z-score: 891.8 bits: 173.7 E(85289): 6.2e-43
Smith-Waterman score: 1091; 49.9% identity (75.6% similar) in 349 aa overlap (10-350:6-335)
10 20 30 40 50 60
pF1KB4 MFPNGTASSPSSSPSPSPGSCGEGGGSRGPGAGAADGMEEPGRNASQNGTLSEGQGSAIL
:.:.:: . .: ::: :. : : : . : . . :.:
NP_001 MEPLFPASTPSWNASS---------PGA-ASGG----GDNRTLVGPAPSAGARAVL
10 20 30 40
70 80 90 100 110 120
pF1KB4 ISFIYSVVCLVGLCGNSMVIYVILRYAKMKTATNIYILNLAIADELLMLSVPFLVTSTLL
. .: .:: .:: ::..::::.::.:::::.:::::::::.:: : ::..:::.:..
NP_001 VPVLYLLVCAAGLGGNTLVIYVVLRFAKMKTVTNIYILNLAVADVLYMLGLPFLATQNAA
50 60 70 80 90 100
130 140 150 160 170 180
pF1KB4 RHWPFGALLCRLVLSVDAVNMFTSIYCLTVLSVDRYVAVVHPIKAARYRRPTVAKVVNLG
:::: .:::::...:.::.:::..::::.:::::.:::::...::.::: :::... .
NP_001 SFWPFGPVLCRLVMTLDGVNQFTSVFCLTVMSVDRYLAVVHPLSSARWRRPRVAKLASAA
110 120 130 140 150 160
190 200 210 220 230 240
pF1KB4 VWVLSLLVILPIVVFSRTAANSDGTVACNMLMPEPAQRWLVGFVLYTFLMGFLLPVGAIC
.::::: . ::..::. . . :: :: :::. : . :..:: ..::. :. .::
NP_001 AWVLSLCMSLPLLVFADV--QEGGT--CNASWPEPVGLWGAVFIIYTAVLGFFAPLLVIC
170 180 190 200 210
250 260 270 280 290
pF1KB4 LCYVLIIAKMRMVALKAGWQQRKRSERKITLMVMMVVMVFVICWMPFYVVQLVN--VFAE
:::.::..:.: .....: :.:::::.: ::..::.::. ::.::..:..:: :
NP_001 LCYLLIVVKVRAAGVRVG-CVRRRSERKVTRMVLVVVLVFAGCWLPFFTVNIVNLAVALP
220 230 240 250 260 270
300 310 320 330 340 350
pF1KB4 QDDATVSQ--LSVILGYANSCANPILYGFLSDNFKRSFQRILCL----SWMDNAAEEPVD
:. :... . :::.::::::::.:::::::::..:::..::: . : : ::
NP_001 QEPASAGLYFFVVILSYANSCANPVLYGFLSDNFRQSFQKVLCLRKGSGAKDADATEPRP
280 290 300 310 320 330
360 370 380 390
pF1KB4 YYATALKSRAYSVEDFQPENLESGGVFRNGTCTSRITTL
NP_001 DRIRQQQEATPPAHRAAANGLMQTSKL
340 350 360
>>XP_016884412 (OMIM: 182453) PREDICTED: somatostatin re (418 aa)
initn: 859 init1: 723 opt: 1049 Z-score: 860.5 bits: 168.1 E(85289): 3.4e-41
Smith-Waterman score: 1049; 49.5% identity (76.0% similar) in 329 aa overlap (57-377:43-365)
30 40 50 60 70 80
pF1KB4 SRGPGAGAADGMEEPGRNASQNGTLSEGQGSAILISFIYSVVCLVGLCGNSMVIYVILRY
:..:: ..: :::.::: :::.::::.::.
XP_016 SEPENASSAWPPDATLGNVSAGPSPAGLAVSGVLIPLVYLVVCVVGLLGNSLVIYVVLRH
20 30 40 50 60 70
90 100 110 120 130 140
pF1KB4 AKMKTATNIYILNLAIADELLMLSVPFLVTSTLLRHWPFGALLCRLVLSVDAVNMFTSIY
. ..::.::::::.::::.::..:::.... : .::::.:.::::..::..:.::::.
XP_016 TASPSVTNVYILNLALADELFMLGLPFLAAQNALSYWPFGSLMCRLVMAVDGINQFTSIF
80 90 100 110 120 130
150 160 170 180 190 200
pF1KB4 CLTVLSVDRYVAVVHPIKAARYRRPTVAKVVNLGVWVLSLLVILPIVVFSRTAANSDGTV
::::.:::::.::::: ..::.: ::..:. .::: : .:.::.:::: . :
XP_016 CLTVMSVDRYLAVVHPTRSARWRTAPVARTVSAAVWVASAVVVLPVVVFSGV---PRGMS
140 150 160 170 180
210 220 230 240 250 260
pF1KB4 ACNMLMPEPAQRWLVGFVLYTFLMGFLLPVGAICLCYVLIIAKMRMVALKAGW----QQR
.:.: :::: : .::..:: .::. :. .:::::.::..:.: .. .. : :.:
XP_016 TCHMQWPEPAAAWRAGFIIYTAALGFFGPLLVICLCYLLIVVKVRSAGRRV-WAPSCQRR
190 200 210 220 230 240
270 280 290 300 310
pF1KB4 KRSERKITLMVMMVVMVFVICWMPFYVVQLVNVFAE--QDDATVSQ--LSVILGYANSCA
.::::..: ::. :: .::.:::::::...::: .. : . : : : ::::::
XP_016 RRSERRVTRMVVAVVALFVLCWMPFYVLNIVNVVCPLPEEPAFFGLYFLVVALPYANSCA
250 260 270 280 290 300
320 330 340 350 360 370
pF1KB4 NPILYGFLSDNFKRSFQRILCLSWMDNAAEEPVDYYATALKSRAYSVEDFQPENLESGGV
::::::::: ::..:.:.: ..::. . :.. . :. . :. . ::
XP_016 NPILYGFLSYRFKQGFRRVLLRPSRRVRSQEPT--VGPPEKTEEEDEEEEDGEESREGGK
310 320 330 340 350 360
380 390
pF1KB4 FRNGTCTSRITTL
XP_016 GKEMNGRVSQITQPGTSGQERPPSRVASKEQQLLPQEASTGEKSSTMRISYL
370 380 390 400 410
>>NP_001042 (OMIM: 182453) somatostatin receptor type 3 (418 aa)
initn: 859 init1: 723 opt: 1049 Z-score: 860.5 bits: 168.1 E(85289): 3.4e-41
Smith-Waterman score: 1049; 49.5% identity (76.0% similar) in 329 aa overlap (57-377:43-365)
30 40 50 60 70 80
pF1KB4 SRGPGAGAADGMEEPGRNASQNGTLSEGQGSAILISFIYSVVCLVGLCGNSMVIYVILRY
:..:: ..: :::.::: :::.::::.::.
NP_001 SEPENASSAWPPDATLGNVSAGPSPAGLAVSGVLIPLVYLVVCVVGLLGNSLVIYVVLRH
20 30 40 50 60 70
90 100 110 120 130 140
pF1KB4 AKMKTATNIYILNLAIADELLMLSVPFLVTSTLLRHWPFGALLCRLVLSVDAVNMFTSIY
. ..::.::::::.::::.::..:::.... : .::::.:.::::..::..:.::::.
NP_001 TASPSVTNVYILNLALADELFMLGLPFLAAQNALSYWPFGSLMCRLVMAVDGINQFTSIF
80 90 100 110 120 130
150 160 170 180 190 200
pF1KB4 CLTVLSVDRYVAVVHPIKAARYRRPTVAKVVNLGVWVLSLLVILPIVVFSRTAANSDGTV
::::.:::::.::::: ..::.: ::..:. .::: : .:.::.:::: . :
NP_001 CLTVMSVDRYLAVVHPTRSARWRTAPVARTVSAAVWVASAVVVLPVVVFSGV---PRGMS
140 150 160 170 180
210 220 230 240 250 260
pF1KB4 ACNMLMPEPAQRWLVGFVLYTFLMGFLLPVGAICLCYVLIIAKMRMVALKAGW----QQR
.:.: :::: : .::..:: .::. :. .:::::.::..:.: .. .. : :.:
NP_001 TCHMQWPEPAAAWRAGFIIYTAALGFFGPLLVICLCYLLIVVKVRSAGRRV-WAPSCQRR
190 200 210 220 230 240
270 280 290 300 310
pF1KB4 KRSERKITLMVMMVVMVFVICWMPFYVVQLVNVFAE--QDDATVSQ--LSVILGYANSCA
.::::..: ::. :: .::.:::::::...::: .. : . : : : ::::::
NP_001 RRSERRVTRMVVAVVALFVLCWMPFYVLNIVNVVCPLPEEPAFFGLYFLVVALPYANSCA
250 260 270 280 290 300
320 330 340 350 360 370
pF1KB4 NPILYGFLSDNFKRSFQRILCLSWMDNAAEEPVDYYATALKSRAYSVEDFQPENLESGGV
::::::::: ::..:.:.: ..::. . :.. . :. . :. . ::
NP_001 NPILYGFLSYRFKQGFRRVLLRPSRRVRSQEPT--VGPPEKTEEEDEEEEDGEESREGGK
310 320 330 340 350 360
380 390
pF1KB4 FRNGTCTSRITTL
NP_001 GKEMNGRVSQITQPGTSGQERPPSRVASKEQQLLPQEASTGEKSSTMRISYL
370 380 390 400 410
>>XP_016884413 (OMIM: 182453) PREDICTED: somatostatin re (418 aa)
initn: 859 init1: 723 opt: 1049 Z-score: 860.5 bits: 168.1 E(85289): 3.4e-41
Smith-Waterman score: 1049; 49.5% identity (76.0% similar) in 329 aa overlap (57-377:43-365)
30 40 50 60 70 80
pF1KB4 SRGPGAGAADGMEEPGRNASQNGTLSEGQGSAILISFIYSVVCLVGLCGNSMVIYVILRY
:..:: ..: :::.::: :::.::::.::.
XP_016 SEPENASSAWPPDATLGNVSAGPSPAGLAVSGVLIPLVYLVVCVVGLLGNSLVIYVVLRH
20 30 40 50 60 70
90 100 110 120 130 140
pF1KB4 AKMKTATNIYILNLAIADELLMLSVPFLVTSTLLRHWPFGALLCRLVLSVDAVNMFTSIY
. ..::.::::::.::::.::..:::.... : .::::.:.::::..::..:.::::.
XP_016 TASPSVTNVYILNLALADELFMLGLPFLAAQNALSYWPFGSLMCRLVMAVDGINQFTSIF
80 90 100 110 120 130
150 160 170 180 190 200
pF1KB4 CLTVLSVDRYVAVVHPIKAARYRRPTVAKVVNLGVWVLSLLVILPIVVFSRTAANSDGTV
::::.:::::.::::: ..::.: ::..:. .::: : .:.::.:::: . :
XP_016 CLTVMSVDRYLAVVHPTRSARWRTAPVARTVSAAVWVASAVVVLPVVVFSGV---PRGMS
140 150 160 170 180
210 220 230 240 250 260
pF1KB4 ACNMLMPEPAQRWLVGFVLYTFLMGFLLPVGAICLCYVLIIAKMRMVALKAGW----QQR
.:.: :::: : .::..:: .::. :. .:::::.::..:.: .. .. : :.:
XP_016 TCHMQWPEPAAAWRAGFIIYTAALGFFGPLLVICLCYLLIVVKVRSAGRRV-WAPSCQRR
190 200 210 220 230 240
270 280 290 300 310
pF1KB4 KRSERKITLMVMMVVMVFVICWMPFYVVQLVNVFAE--QDDATVSQ--LSVILGYANSCA
.::::..: ::. :: .::.:::::::...::: .. : . : : : ::::::
XP_016 RRSERRVTRMVVAVVALFVLCWMPFYVLNIVNVVCPLPEEPAFFGLYFLVVALPYANSCA
250 260 270 280 290 300
320 330 340 350 360 370
pF1KB4 NPILYGFLSDNFKRSFQRILCLSWMDNAAEEPVDYYATALKSRAYSVEDFQPENLESGGV
::::::::: ::..:.:.: ..::. . :.. . :. . :. . ::
XP_016 NPILYGFLSYRFKQGFRRVLLRPSRRVRSQEPT--VGPPEKTEEEDEEEEDGEESREGGK
310 320 330 340 350 360
380 390
pF1KB4 FRNGTCTSRITTL
XP_016 GKEMNGRVSQITQPGTSGQERPPSRVASKEQQLLPQEASTGEKSSTMRISYL
370 380 390 400 410
>>XP_005261778 (OMIM: 182453) PREDICTED: somatostatin re (418 aa)
initn: 859 init1: 723 opt: 1049 Z-score: 860.5 bits: 168.1 E(85289): 3.4e-41
Smith-Waterman score: 1049; 49.5% identity (76.0% similar) in 329 aa overlap (57-377:43-365)
30 40 50 60 70 80
pF1KB4 SRGPGAGAADGMEEPGRNASQNGTLSEGQGSAILISFIYSVVCLVGLCGNSMVIYVILRY
:..:: ..: :::.::: :::.::::.::.
XP_005 SEPENASSAWPPDATLGNVSAGPSPAGLAVSGVLIPLVYLVVCVVGLLGNSLVIYVVLRH
20 30 40 50 60 70
90 100 110 120 130 140
pF1KB4 AKMKTATNIYILNLAIADELLMLSVPFLVTSTLLRHWPFGALLCRLVLSVDAVNMFTSIY
. ..::.::::::.::::.::..:::.... : .::::.:.::::..::..:.::::.
XP_005 TASPSVTNVYILNLALADELFMLGLPFLAAQNALSYWPFGSLMCRLVMAVDGINQFTSIF
80 90 100 110 120 130
150 160 170 180 190 200
pF1KB4 CLTVLSVDRYVAVVHPIKAARYRRPTVAKVVNLGVWVLSLLVILPIVVFSRTAANSDGTV
::::.:::::.::::: ..::.: ::..:. .::: : .:.::.:::: . :
XP_005 CLTVMSVDRYLAVVHPTRSARWRTAPVARTVSAAVWVASAVVVLPVVVFSGV---PRGMS
140 150 160 170 180
210 220 230 240 250 260
pF1KB4 ACNMLMPEPAQRWLVGFVLYTFLMGFLLPVGAICLCYVLIIAKMRMVALKAGW----QQR
.:.: :::: : .::..:: .::. :. .:::::.::..:.: .. .. : :.:
XP_005 TCHMQWPEPAAAWRAGFIIYTAALGFFGPLLVICLCYLLIVVKVRSAGRRV-WAPSCQRR
190 200 210 220 230 240
270 280 290 300 310
pF1KB4 KRSERKITLMVMMVVMVFVICWMPFYVVQLVNVFAE--QDDATVSQ--LSVILGYANSCA
.::::..: ::. :: .::.:::::::...::: .. : . : : : ::::::
XP_005 RRSERRVTRMVVAVVALFVLCWMPFYVLNIVNVVCPLPEEPAFFGLYFLVVALPYANSCA
250 260 270 280 290 300
320 330 340 350 360 370
pF1KB4 NPILYGFLSDNFKRSFQRILCLSWMDNAAEEPVDYYATALKSRAYSVEDFQPENLESGGV
::::::::: ::..:.:.: ..::. . :.. . :. . :. . ::
XP_005 NPILYGFLSYRFKQGFRRVLLRPSRRVRSQEPT--VGPPEKTEEEDEEEEDGEESREGGK
310 320 330 340 350 360
380 390
pF1KB4 FRNGTCTSRITTL
XP_005 GKEMNGRVSQITQPGTSGQERPPSRVASKEQQLLPQEASTGEKSSTMRISYL
370 380 390 400 410
>>XP_006724374 (OMIM: 182453) PREDICTED: somatostatin re (418 aa)
initn: 859 init1: 723 opt: 1049 Z-score: 860.5 bits: 168.1 E(85289): 3.4e-41
Smith-Waterman score: 1049; 49.5% identity (76.0% similar) in 329 aa overlap (57-377:43-365)
30 40 50 60 70 80
pF1KB4 SRGPGAGAADGMEEPGRNASQNGTLSEGQGSAILISFIYSVVCLVGLCGNSMVIYVILRY
:..:: ..: :::.::: :::.::::.::.
XP_006 SEPENASSAWPPDATLGNVSAGPSPAGLAVSGVLIPLVYLVVCVVGLLGNSLVIYVVLRH
20 30 40 50 60 70
90 100 110 120 130 140
pF1KB4 AKMKTATNIYILNLAIADELLMLSVPFLVTSTLLRHWPFGALLCRLVLSVDAVNMFTSIY
. ..::.::::::.::::.::..:::.... : .::::.:.::::..::..:.::::.
XP_006 TASPSVTNVYILNLALADELFMLGLPFLAAQNALSYWPFGSLMCRLVMAVDGINQFTSIF
80 90 100 110 120 130
150 160 170 180 190 200
pF1KB4 CLTVLSVDRYVAVVHPIKAARYRRPTVAKVVNLGVWVLSLLVILPIVVFSRTAANSDGTV
::::.:::::.::::: ..::.: ::..:. .::: : .:.::.:::: . :
XP_006 CLTVMSVDRYLAVVHPTRSARWRTAPVARTVSAAVWVASAVVVLPVVVFSGV---PRGMS
140 150 160 170 180
210 220 230 240 250 260
pF1KB4 ACNMLMPEPAQRWLVGFVLYTFLMGFLLPVGAICLCYVLIIAKMRMVALKAGW----QQR
.:.: :::: : .::..:: .::. :. .:::::.::..:.: .. .. : :.:
XP_006 TCHMQWPEPAAAWRAGFIIYTAALGFFGPLLVICLCYLLIVVKVRSAGRRV-WAPSCQRR
190 200 210 220 230 240
270 280 290 300 310
pF1KB4 KRSERKITLMVMMVVMVFVICWMPFYVVQLVNVFAE--QDDATVSQ--LSVILGYANSCA
.::::..: ::. :: .::.:::::::...::: .. : . : : : ::::::
XP_006 RRSERRVTRMVVAVVALFVLCWMPFYVLNIVNVVCPLPEEPAFFGLYFLVVALPYANSCA
250 260 270 280 290 300
320 330 340 350 360 370
pF1KB4 NPILYGFLSDNFKRSFQRILCLSWMDNAAEEPVDYYATALKSRAYSVEDFQPENLESGGV
::::::::: ::..:.:.: ..::. . :.. . :. . :. . ::
XP_006 NPILYGFLSYRFKQGFRRVLLRPSRRVRSQEPT--VGPPEKTEEEDEEEEDGEESREGGK
310 320 330 340 350 360
380 390
pF1KB4 FRNGTCTSRITTL
XP_006 GKEMNGRVSQITQPGTSGQERPPSRVASKEQQLLPQEASTGEKSSTMRISYL
370 380 390 400 410
391 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 14:52:37 2016 done: Thu Nov 3 14:52:38 2016
Total Scan time: 9.000 Total Display time: 0.060
Function used was FASTA [36.3.4 Apr, 2011]