Result of FASTA (omim) for
pF1KB4190
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB4190, 364 aa
1>>>pF1KB4190 364 - 364 aa - 364 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.4535+/-0.000408; mu= 20.8655+/- 0.025
mean_var=63.8639+/-13.917, 0's: 0 Z-trim(111.6): 20 B-trim: 1245 in 1/48
Lambda= 0.160489
statistics sampled from 20255 (20272) to 20255 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.594), E-opt: 0.2 (0.238), width: 16
Scan time: 8.250
The best scores are: opt bits E(85289)
NP_060859 (OMIM: 266265,605881) GDP-fucose transpo ( 364) 2392 562.8 4.2e-160
NP_001138738 (OMIM: 266265,605881) GDP-fucose tran ( 351) 2306 542.9 4e-154
NP_001138737 (OMIM: 266265,605881) GDP-fucose tran ( 351) 2306 542.9 4e-154
XP_011518504 (OMIM: 266265,605881) PREDICTED: GDP- ( 195) 1254 299.1 5.5e-81
XP_011518505 (OMIM: 266265,605881) PREDICTED: GDP- ( 192) 1146 274.1 1.8e-73
NP_008932 (OMIM: 609182) UDP-N-acetylglucosamine/U ( 337) 215 58.8 2.1e-08
NP_055954 (OMIM: 269250,610804) UDP-glucuronic aci ( 355) 210 57.6 5e-08
XP_005251731 (OMIM: 609182) PREDICTED: UDP-N-acety ( 295) 207 56.9 7e-08
XP_005251735 (OMIM: 609182) PREDICTED: UDP-N-acety ( 219) 185 51.6 1.9e-06
XP_005251733 (OMIM: 609182) PREDICTED: UDP-N-acety ( 259) 152 44.1 0.00044
XP_005251730 (OMIM: 609182) PREDICTED: UDP-N-acety ( 300) 152 44.1 0.00049
XP_005251732 (OMIM: 609182) PREDICTED: UDP-N-acety ( 290) 148 43.2 0.0009
>>NP_060859 (OMIM: 266265,605881) GDP-fucose transporter (364 aa)
initn: 2392 init1: 2392 opt: 2392 Z-score: 2995.4 bits: 562.8 E(85289): 4.2e-160
Smith-Waterman score: 2392; 100.0% identity (100.0% similar) in 364 aa overlap (1-364:1-364)
10 20 30 40 50 60
pF1KB4 MNRAPLKRSRILHMALTGASDPSAEAEANGEKPFLLRALQIALVVSLYWVTSISMVFLNK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 MNRAPLKRSRILHMALTGASDPSAEAEANGEKPFLLRALQIALVVSLYWVTSISMVFLNK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 YLLDSPSLRLDTPIFVTFYQCLVTTLLCKGLSALAACCPGAVDFPSLRLDLRVARSVLPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 YLLDSPSLRLDTPIFVTFYQCLVTTLLCKGLSALAACCPGAVDFPSLRLDLRVARSVLPL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 SVVFIGMITFNNLCLKYVGVAFYNVGRSLTTVFNVLLSYLLLKQTTSFYALLTCGIIIGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 SVVFIGMITFNNLCLKYVGVAFYNVGRSLTTVFNVLLSYLLLKQTTSFYALLTCGIIIGG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB4 FWLGVDQEGAEGTLSWLGTVFGVLASLCVSLNAIYTTKVLPAVDGSIWRLTFYNNVNACI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 FWLGVDQEGAEGTLSWLGTVFGVLASLCVSLNAIYTTKVLPAVDGSIWRLTFYNNVNACI
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB4 LFLPLLLLLGELQALRDFAQLGSAHFWGMMTLGGLFGFAIGYVTGLQIKFTSPLTHNVSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 LFLPLLLLLGELQALRDFAQLGSAHFWGMMTLGGLFGFAIGYVTGLQIKFTSPLTHNVSG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB4 TAKACAQTVLAVLYYEETKSFLWWTSNMMVLGGSSAYTWVRGWEMKKTPEEPSPKDSEKS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 TAKACAQTVLAVLYYEETKSFLWWTSNMMVLGGSSAYTWVRGWEMKKTPEEPSPKDSEKS
310 320 330 340 350 360
pF1KB4 AMGV
::::
NP_060 AMGV
>>NP_001138738 (OMIM: 266265,605881) GDP-fucose transpor (351 aa)
initn: 2306 init1: 2306 opt: 2306 Z-score: 2888.0 bits: 542.9 E(85289): 4e-154
Smith-Waterman score: 2306; 100.0% identity (100.0% similar) in 351 aa overlap (14-364:1-351)
10 20 30 40 50 60
pF1KB4 MNRAPLKRSRILHMALTGASDPSAEAEANGEKPFLLRALQIALVVSLYWVTSISMVFLNK
:::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MALTGASDPSAEAEANGEKPFLLRALQIALVVSLYWVTSISMVFLNK
10 20 30 40
70 80 90 100 110 120
pF1KB4 YLLDSPSLRLDTPIFVTFYQCLVTTLLCKGLSALAACCPGAVDFPSLRLDLRVARSVLPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YLLDSPSLRLDTPIFVTFYQCLVTTLLCKGLSALAACCPGAVDFPSLRLDLRVARSVLPL
50 60 70 80 90 100
130 140 150 160 170 180
pF1KB4 SVVFIGMITFNNLCLKYVGVAFYNVGRSLTTVFNVLLSYLLLKQTTSFYALLTCGIIIGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SVVFIGMITFNNLCLKYVGVAFYNVGRSLTTVFNVLLSYLLLKQTTSFYALLTCGIIIGG
110 120 130 140 150 160
190 200 210 220 230 240
pF1KB4 FWLGVDQEGAEGTLSWLGTVFGVLASLCVSLNAIYTTKVLPAVDGSIWRLTFYNNVNACI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FWLGVDQEGAEGTLSWLGTVFGVLASLCVSLNAIYTTKVLPAVDGSIWRLTFYNNVNACI
170 180 190 200 210 220
250 260 270 280 290 300
pF1KB4 LFLPLLLLLGELQALRDFAQLGSAHFWGMMTLGGLFGFAIGYVTGLQIKFTSPLTHNVSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LFLPLLLLLGELQALRDFAQLGSAHFWGMMTLGGLFGFAIGYVTGLQIKFTSPLTHNVSG
230 240 250 260 270 280
310 320 330 340 350 360
pF1KB4 TAKACAQTVLAVLYYEETKSFLWWTSNMMVLGGSSAYTWVRGWEMKKTPEEPSPKDSEKS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TAKACAQTVLAVLYYEETKSFLWWTSNMMVLGGSSAYTWVRGWEMKKTPEEPSPKDSEKS
290 300 310 320 330 340
pF1KB4 AMGV
::::
NP_001 AMGV
350
>>NP_001138737 (OMIM: 266265,605881) GDP-fucose transpor (351 aa)
initn: 2306 init1: 2306 opt: 2306 Z-score: 2888.0 bits: 542.9 E(85289): 4e-154
Smith-Waterman score: 2306; 100.0% identity (100.0% similar) in 351 aa overlap (14-364:1-351)
10 20 30 40 50 60
pF1KB4 MNRAPLKRSRILHMALTGASDPSAEAEANGEKPFLLRALQIALVVSLYWVTSISMVFLNK
:::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MALTGASDPSAEAEANGEKPFLLRALQIALVVSLYWVTSISMVFLNK
10 20 30 40
70 80 90 100 110 120
pF1KB4 YLLDSPSLRLDTPIFVTFYQCLVTTLLCKGLSALAACCPGAVDFPSLRLDLRVARSVLPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YLLDSPSLRLDTPIFVTFYQCLVTTLLCKGLSALAACCPGAVDFPSLRLDLRVARSVLPL
50 60 70 80 90 100
130 140 150 160 170 180
pF1KB4 SVVFIGMITFNNLCLKYVGVAFYNVGRSLTTVFNVLLSYLLLKQTTSFYALLTCGIIIGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SVVFIGMITFNNLCLKYVGVAFYNVGRSLTTVFNVLLSYLLLKQTTSFYALLTCGIIIGG
110 120 130 140 150 160
190 200 210 220 230 240
pF1KB4 FWLGVDQEGAEGTLSWLGTVFGVLASLCVSLNAIYTTKVLPAVDGSIWRLTFYNNVNACI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FWLGVDQEGAEGTLSWLGTVFGVLASLCVSLNAIYTTKVLPAVDGSIWRLTFYNNVNACI
170 180 190 200 210 220
250 260 270 280 290 300
pF1KB4 LFLPLLLLLGELQALRDFAQLGSAHFWGMMTLGGLFGFAIGYVTGLQIKFTSPLTHNVSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LFLPLLLLLGELQALRDFAQLGSAHFWGMMTLGGLFGFAIGYVTGLQIKFTSPLTHNVSG
230 240 250 260 270 280
310 320 330 340 350 360
pF1KB4 TAKACAQTVLAVLYYEETKSFLWWTSNMMVLGGSSAYTWVRGWEMKKTPEEPSPKDSEKS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TAKACAQTVLAVLYYEETKSFLWWTSNMMVLGGSSAYTWVRGWEMKKTPEEPSPKDSEKS
290 300 310 320 330 340
pF1KB4 AMGV
::::
NP_001 AMGV
350
>>XP_011518504 (OMIM: 266265,605881) PREDICTED: GDP-fuco (195 aa)
initn: 1254 init1: 1254 opt: 1254 Z-score: 1574.9 bits: 299.1 E(85289): 5.5e-81
Smith-Waterman score: 1254; 100.0% identity (100.0% similar) in 186 aa overlap (179-364:10-195)
150 160 170 180 190 200
pF1KB4 LTTVFNVLLSYLLLKQTTSFYALLTCGIIIGGFWLGVDQEGAEGTLSWLGTVFGVLASLC
::::::::::::::::::::::::::::::
XP_011 MLQLLLDSEGGFWLGVDQEGAEGTLSWLGTVFGVLASLC
10 20 30
210 220 230 240 250 260
pF1KB4 VSLNAIYTTKVLPAVDGSIWRLTFYNNVNACILFLPLLLLLGELQALRDFAQLGSAHFWG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VSLNAIYTTKVLPAVDGSIWRLTFYNNVNACILFLPLLLLLGELQALRDFAQLGSAHFWG
40 50 60 70 80 90
270 280 290 300 310 320
pF1KB4 MMTLGGLFGFAIGYVTGLQIKFTSPLTHNVSGTAKACAQTVLAVLYYEETKSFLWWTSNM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MMTLGGLFGFAIGYVTGLQIKFTSPLTHNVSGTAKACAQTVLAVLYYEETKSFLWWTSNM
100 110 120 130 140 150
330 340 350 360
pF1KB4 MVLGGSSAYTWVRGWEMKKTPEEPSPKDSEKSAMGV
::::::::::::::::::::::::::::::::::::
XP_011 MVLGGSSAYTWVRGWEMKKTPEEPSPKDSEKSAMGV
160 170 180 190
>>XP_011518505 (OMIM: 266265,605881) PREDICTED: GDP-fuco (192 aa)
initn: 1146 init1: 1146 opt: 1146 Z-score: 1439.8 bits: 274.1 E(85289): 1.8e-73
Smith-Waterman score: 1146; 100.0% identity (100.0% similar) in 179 aa overlap (1-179:1-179)
10 20 30 40 50 60
pF1KB4 MNRAPLKRSRILHMALTGASDPSAEAEANGEKPFLLRALQIALVVSLYWVTSISMVFLNK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MNRAPLKRSRILHMALTGASDPSAEAEANGEKPFLLRALQIALVVSLYWVTSISMVFLNK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 YLLDSPSLRLDTPIFVTFYQCLVTTLLCKGLSALAACCPGAVDFPSLRLDLRVARSVLPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 YLLDSPSLRLDTPIFVTFYQCLVTTLLCKGLSALAACCPGAVDFPSLRLDLRVARSVLPL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 SVVFIGMITFNNLCLKYVGVAFYNVGRSLTTVFNVLLSYLLLKQTTSFYALLTCGIIIGG
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SVVFIGMITFNNLCLKYVGVAFYNVGRSLTTVFNVLLSYLLLKQTTSFYALLTCGIIIGE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB4 FWLGVDQEGAEGTLSWLGTVFGVLASLCVSLNAIYTTKVLPAVDGSIWRLTFYNNVNACI
XP_011 DESQATILGLPS
190
>>NP_008932 (OMIM: 609182) UDP-N-acetylglucosamine/UDP-g (337 aa)
initn: 167 init1: 93 opt: 215 Z-score: 271.7 bits: 58.8 E(85289): 2.1e-08
Smith-Waterman score: 266; 23.9% identity (58.2% similar) in 335 aa overlap (24-349:7-325)
10 20 30 40 50
pF1KB4 MNRAPLKRSRILHMALTGASDPSAEAEANGEKPFLLR-ALQIALVVS--LYWVTSISMVF
::::. : .: : ..: ..: .: . :. .:.
NP_008 MTAGGQAEAEGAGGEPGAARLPSRVARLLSALFYGTCSFLIVL
10 20 30 40
60 70 80 90 100 110
pF1KB4 LNKYLLDSPSLRLDTPIFVTFYQCLVTTLLCKGLSALAACCPGAVDFPSLRLDLRVARSV
.:: :: . .. .:::. . : ...:.. .: : . ::.. : .. ..
NP_008 VNKALLTTYGF--PSPIFLGIGQ-MAATIMILYVSKLNK----IIHFPDF--DKKIPVKL
50 60 70 80 90
120 130 140 150 160 170
pF1KB4 LPLSVVFIGMITFNNLCLKYVGVAFYNVGRSLTTVFNVLLSYLLLKQTTSFYALLTC-GI
.:: ....: . . ... ...: :..: ...:: ..: . :. .:. .:
NP_008 FPLPLLYVGNHISGLSSTSKLSLPMFTVLRKFTIPLTLLLETIILGKQYSLNIILSVFAI
100 110 120 130 140 150
180 190 200 210 220 230
pF1KB4 IIGGFWLGVDQEGAEGTLSWLGTVFGVLASLCVSLNAIYTTKVLPAVDGSIWRLTFYNNV
:.:.: :.. ... : .: : .. .. :..:: . . . . . . ::
NP_008 ILGAFI----AAGSDLAFNLEGYIFVFLNDIFTAANGVYTKQKMDPKELGKYGVLFY---
160 170 180 190 200
240 250 260 270 280 290
pF1KB4 NACILFLPLLLL---LGELQALRDFAQLGSAHFWGMMTLGGLFGFAIGYVTGLQIKFTSP
:::....: :.. :.:: .: : .. : .. :. ..:: . : : : ..:
NP_008 NACFMIIPTLIISVSTGDLQQATEFNQWKNVVFILQFLLSCFLGFLLMYSTVLCSYYNSA
210 220 230 240 250 260
300 310 320 330 340 350
pF1KB4 LTHNVSGTAKACAQTVLAVLYY-EETKSFLWWTSNMMVLGGSSAYTWVR-GWEMKKTPEE
:: : :. : . . ...: . :.: ... . ..:. :... . ..: :
NP_008 LTTAVVGAIKNVSVAYIGILIGGDYIFSLLNFVGLNICMAGGLRYSFLTLSSQLKPKPVG
270 280 290 300 310 320
360
pF1KB4 PSPKDSEKSAMGV
NP_008 EENICLDLKS
330
>>NP_055954 (OMIM: 269250,610804) UDP-glucuronic acid/UD (355 aa)
initn: 148 init1: 64 opt: 210 Z-score: 265.1 bits: 57.6 E(85289): 5e-08
Smith-Waterman score: 231; 22.0% identity (56.8% similar) in 336 aa overlap (7-340:8-330)
10 20 30 40 50
pF1KB4 MNRAPLKRSRILHMALTGASDPSAEAEANGEKPFLLRALQIALVVSLYWVTSISMVFLN
...:. : . .: : : . . : .. :....: :.:. .: .:
NP_055 MAEVHRRQHARVKGEAPAKSSTLRDEEELGMASAETLTVFLKLLAAGFYGVSSFLIVVVN
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB4 KYLLDSPSLRLDTPIFVTFYQCLVTTLLCKGLSALAACCPGAVDFPSLRLDLRVARSVLP
: .: . :. . . : . : ..:. . .:: . : ::.: : : :...:
NP_055 KSVLTN--YRFPSSLCVGLGQMVATVAVLWVGKALRV-----VKFPDL--DRNVPRKTFP
70 80 90 100 110
120 130 140 150 160 170
pF1KB4 LSVVFIGMITFNNLCLKYVGVAFYNVGRSLTTVFNVLLSYLLLKQTTSFYALLTCGIIIG
: ....: . . : ... ...: : .. .:... .:::.: :. .: .:
NP_055 LPLLYFGNQITGLFSTKKLNLPMFTVLRRFSILFTMFAEGVLLKKTFSWGIKMTVFAMII
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB4 GFWLGVDQEGAEGTLSWLGTVFGVLASLCVSLNAIYTTKVLPAVDGSIWRLTFYNNVNAC
: ....... : .. : .: .. .. .. :. :. . : . . . . : .:: .
NP_055 GAFVAASSDLA---FDLEGYAFILINDVLTAANGAYVKQKLDSKELGKYGLLYYNALFMI
180 190 200 210 220
240 250 260 270 280 290
pF1KB4 ILFLPLLLLLGELQALRDFAQLGSAHFWGMMTLGGLFGFAIGYVTGLQIKFTSPLTHNVS
. : . . :. : .: ... : ..::. ..:: . :.: : ...: :: ..
NP_055 LPTLAIAYFTGDAQKAVEFEGWADTLFLLQFTLSCVMGFILMYATVLCTQYNSALTTTIV
230 240 250 260 270 280
300 310 320 330 340 350
pF1KB4 GTAKACAQTVLAVLYYEETKSFLW--WTSNMMVLGGSSAYTWVRGWEMKKTPEEPSPKDS
: : : ..... . : : . . . ..:: .:...
NP_055 GCIKNILITYIGMVFGGDYI-FTWTNFIGLNISIAGSLVYSYITFTEEQLSKQSEANNKL
290 300 310 320 330 340
360
pF1KB4 EKSAMGV
NP_055 DIKGKGAV
350
>>XP_005251731 (OMIM: 609182) PREDICTED: UDP-N-acetylglu (295 aa)
initn: 167 init1: 93 opt: 207 Z-score: 262.4 bits: 56.9 E(85289): 7e-08
Smith-Waterman score: 258; 25.2% identity (58.7% similar) in 286 aa overlap (24-303:7-277)
10 20 30 40 50
pF1KB4 MNRAPLKRSRILHMALTGASDPSAEAEANGEKPFLLR-ALQIALVVS--LYWVTSISMVF
::::. : .: : ..: ..: .: . :. .:.
XP_005 MTAGGQAEAEGAGGEPGAARLPSRVARLLSALFYGTCSFLIVL
10 20 30 40
60 70 80 90 100 110
pF1KB4 LNKYLLDSPSLRLDTPIFVTFYQCLVTTLLCKGLSALAACCPGAVDFPSLRLDLRVARSV
.:: :: . .. .:::. . : ...:.. .: : . ::.. : .. ..
XP_005 VNKALLTTYGF--PSPIFLGIGQ-MAATIMILYVSKLNK----IIHFPDF--DKKIPVKL
50 60 70 80 90
120 130 140 150 160 170
pF1KB4 LPLSVVFIGMITFNNLCLKYVGVAFYNVGRSLTTVFNVLLSYLLLKQTTSFYALLTCGII
.:: ....: . . ... ...: :..: ...:: ..: . :. .:. :
XP_005 FPLPLLYVGNHISGLSSTSKLSLPMFTVLRKFTIPLTLLLETIILGKQYSLNIILSVFAI
100 110 120 130 140 150
180 190 200 210 220 230
pF1KB4 IGGFWLGVDQEGAEGTLSWLGTVFGVLASLCVSLNAIYTTKVLPAVDGSIWRLTFYNNVN
: : .... :.. ... : .: : .. .. :..:: . . . . . . :::
XP_005 ILGAFIAA---GSDLAFNLEGYIFVFLNDIFTAANGVYTKQKMDPKELGKYGVLFYN---
160 170 180 190 200
240 250 260 270 280 290
pF1KB4 ACILFLPLLLL---LGELQALRDFAQLGSAHFWGMMTLGGLFGFAIGYVTGLQIKFTSPL
::....: :.. :.:: .: : .. : .. :. ..:: . : : : ..: :
XP_005 ACFMIIPTLIISVSTGDLQQATEFNQWKNVVFILQFLLSCFLGFLLMYSTVLCSYYNSAL
210 220 230 240 250 260
300 310 320 330 340 350
pF1KB4 THNVSGTAKACAQTVLAVLYYEETKSFLWWTSNMMVLGGSSAYTWVRGWEMKKTPEEPSP
: : :. :
XP_005 TTAVVGAIKHGRGLEIFLFNTEQPVKT
270 280 290
>>XP_005251735 (OMIM: 609182) PREDICTED: UDP-N-acetylglu (219 aa)
initn: 127 init1: 93 opt: 185 Z-score: 236.6 bits: 51.6 E(85289): 1.9e-06
Smith-Waterman score: 185; 23.6% identity (58.5% similar) in 212 aa overlap (143-349:2-207)
120 130 140 150 160 170
pF1KB4 VARSVLPLSVVFIGMITFNNLCLKYVGVAFYNVGRSLTTVFNVLLSYLLLKQTTSFYALL
..: :..: ...:: ..: . :. .:
XP_005 MFTVLRKFTIPLTLLLETIILGKQYSLNIIL
10 20 30
180 190 200 210 220 230
pF1KB4 TCGIIIGGFWLGVDQEGAEGTLSWLGTVFGVLASLCVSLNAIYTTKVLPAVDGSIWRLTF
. :: : .... :.. ... : .: : .. .. :..:: . . . . . . :
XP_005 SVFAIILGAFIAA---GSDLAFNLEGYIFVFLNDIFTAANGVYTKQKMDPKELGKYGVLF
40 50 60 70 80
240 250 260 270 280
pF1KB4 YNNVNACILFLPLLLL---LGELQALRDFAQLGSAHFWGMMTLGGLFGFAIGYVTGLQIK
:: ::....: :.. :.:: .: : .. : .. :. ..:: . : : :
XP_005 YN---ACFMIIPTLIISVSTGDLQQATEFNQWKNVVFILQFLLSCFLGFLLMYSTVLCSY
90 100 110 120 130 140
290 300 310 320 330 340
pF1KB4 FTSPLTHNVSGTAKACAQTVLAVLYY-EETKSFLWWTSNMMVLGGSSAYTWVR-GWEMKK
..: :: : :. : . . ...: . :.: ... . ..:. :... . ..:
XP_005 YNSALTTAVVGAIKNVSVAYIGILIGGDYIFSLLNFVGLNICMAGGLRYSFLTLSSQLKP
150 160 170 180 190 200
350 360
pF1KB4 TPEEPSPKDSEKSAMGV
:
XP_005 KPVGEENICLDLKS
210
>>XP_005251733 (OMIM: 609182) PREDICTED: UDP-N-acetylglu (259 aa)
initn: 93 init1: 50 opt: 152 Z-score: 194.3 bits: 44.1 E(85289): 0.00044
Smith-Waterman score: 203; 23.7% identity (59.4% similar) in 249 aa overlap (24-266:7-240)
10 20 30 40 50
pF1KB4 MNRAPLKRSRILHMALTGASDPSAEAEANGEKPFLLR-ALQIALVVS--LYWVTSISMVF
::::. : .: : ..: ..: .: . :. .:.
XP_005 MTAGGQAEAEGAGGEPGAARLPSRVARLLSALFYGTCSFLIVL
10 20 30 40
60 70 80 90 100 110
pF1KB4 LNKYLLDSPSLRLDTPIFVTFYQCLVTTLLCKGLSALAACCPGAVDFPSLRLDLRVARSV
.:: :: . .. .:::. . : ...:.. .: : . ::.. : .. ..
XP_005 VNKALLTTYGF--PSPIFLGIGQ-MAATIMILYVSKLNK----IIHFPDF--DKKIPVKL
50 60 70 80 90
120 130 140 150 160 170
pF1KB4 LPLSVVFIGMITFNNLCLKYVGVAFYNVGRSLTTVFNVLLSYLLLKQTTSFYALLTCGII
.:: ....: . . ... ...: :..: ...:: ..: . :. .:. :
XP_005 FPLPLLYVGNHISGLSSTSKLSLPMFTVLRKFTIPLTLLLETIILGKQYSLNIILSVFAI
100 110 120 130 140 150
180 190 200 210 220 230
pF1KB4 IGGFWLGVDQEGAEGTLSWLGTVFGVLASLCVSLNAIYTTKVLPAVDGSIWRLTFYNNVN
: : .... :.. ... : .: : .. .. :..:: . . . . . . :::
XP_005 ILGAFIAA---GSDLAFNLEGYIFVFLNDIFTAANGVYTKQKMDPKELGKYGVLFYN---
160 170 180 190 200
240 250 260 270 280 290
pF1KB4 ACILFLPLLLL---LGELQALRDFAQLGSAHFWGMMTLGGLFGFAIGYVTGLQIKFTSPL
::....: :.. :.:: . . ::...
XP_005 ACFMIIPTLIISVSTGDLQQVSADVLHGSVQLLQFSPDDSSGWSHQAWQGA
210 220 230 240 250
300 310 320 330 340 350
pF1KB4 THNVSGTAKACAQTVLAVLYYEETKSFLWWTSNMMVLGGSSAYTWVRGWEMKKTPEEPSP
364 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 05:42:25 2016 done: Sat Nov 5 05:42:26 2016
Total Scan time: 8.250 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]