Result of FASTA (omim) for
pF1KB3870
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB3870, 367 aa
1>>>pF1KB3870 367 - 367 aa - 367 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.5934+/-0.000379; mu= 14.8215+/- 0.024
mean_var=61.9352+/-12.220, 0's: 0 Z-trim(112.7): 51 B-trim: 177 in 1/55
Lambda= 0.162969
statistics sampled from 21721 (21772) to 21721 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.642), E-opt: 0.2 (0.255), width: 16
Scan time: 8.370
The best scores are: opt bits E(85289)
NP_003627 (OMIM: 601142) voltage-gated potassium c ( 367) 2433 580.6 1.9e-165
NP_001186790 (OMIM: 601142) voltage-gated potassiu ( 367) 2433 580.6 1.9e-165
NP_001186789 (OMIM: 601142) voltage-gated potassiu ( 367) 2433 580.6 1.9e-165
XP_011540623 (OMIM: 601142) PREDICTED: voltage-gat ( 395) 2254 538.5 9.4e-153
XP_011540624 (OMIM: 601142) PREDICTED: voltage-gat ( 395) 2254 538.5 9.4e-153
XP_005263571 (OMIM: 601142) PREDICTED: voltage-gat ( 353) 2205 527.0 2.5e-149
NP_742128 (OMIM: 601142) voltage-gated potassium c ( 353) 2205 527.0 2.5e-149
XP_016858109 (OMIM: 601142) PREDICTED: voltage-gat ( 400) 2180 521.2 1.6e-147
XP_016858107 (OMIM: 601142) PREDICTED: voltage-gat ( 420) 2180 521.2 1.7e-147
XP_016858108 (OMIM: 601142) PREDICTED: voltage-gat ( 420) 2180 521.2 1.7e-147
NP_001186792 (OMIM: 601142) voltage-gated potassiu ( 300) 1979 473.9 2.1e-133
NP_751891 (OMIM: 601141) voltage-gated potassium c ( 401) 1940 464.7 1.6e-130
NP_003462 (OMIM: 601141) voltage-gated potassium c ( 408) 1931 462.6 7e-130
NP_751892 (OMIM: 601141) voltage-gated potassium c ( 419) 1925 461.2 1.9e-129
XP_011511417 (OMIM: 601141) PREDICTED: voltage-gat ( 337) 1923 460.7 2.2e-129
XP_016862660 (OMIM: 601141) PREDICTED: voltage-gat ( 337) 1923 460.7 2.2e-129
XP_011511418 (OMIM: 601141) PREDICTED: voltage-gat ( 334) 1734 416.3 5.1e-116
XP_011511419 (OMIM: 601141) PREDICTED: voltage-gat ( 295) 1716 412.0 8.6e-115
XP_016862662 (OMIM: 601141) PREDICTED: voltage-gat ( 295) 1716 412.0 8.6e-115
XP_016862661 (OMIM: 601141) PREDICTED: voltage-gat ( 295) 1716 412.0 8.6e-115
NP_004723 (OMIM: 604111) voltage-gated potassium c ( 404) 1712 411.1 2.2e-114
XP_016880793 (OMIM: 604111) PREDICTED: voltage-gat ( 384) 1451 349.7 6.2e-96
XP_011522370 (OMIM: 604111) PREDICTED: voltage-gat ( 411) 1450 349.5 7.8e-96
NP_001186791 (OMIM: 601142) voltage-gated potassiu ( 415) 1344 324.6 2.5e-88
XP_016858110 (OMIM: 601142) PREDICTED: voltage-gat ( 435) 1344 324.6 2.6e-88
NP_001295151 (OMIM: 601141) voltage-gated potassiu ( 372) 1161 281.6 2e-75
NP_001295146 (OMIM: 601141) voltage-gated potassiu ( 390) 1161 281.6 2.1e-75
XP_016880795 (OMIM: 604111) PREDICTED: voltage-gat ( 326) 989 241.1 2.7e-63
XP_016862663 (OMIM: 601141) PREDICTED: voltage-gat ( 233) 784 192.9 6.4e-49
XP_016880794 (OMIM: 604111) PREDICTED: voltage-gat ( 382) 738 182.1 1.8e-45
NP_003680 (OMIM: 603418) aflatoxin B1 aldehyde red ( 359) 272 72.5 1.6e-12
NP_036199 (OMIM: 608477) aflatoxin B1 aldehyde red ( 331) 268 71.6 2.9e-12
XP_011539348 (OMIM: 608477) PREDICTED: aflatoxin B ( 375) 259 69.5 1.4e-11
XP_016856203 (OMIM: 608477) PREDICTED: aflatoxin B ( 304) 215 59.1 1.5e-08
NP_001307908 (OMIM: 603418) aflatoxin B1 aldehyde ( 324) 177 50.2 7.9e-06
NP_001619 (OMIM: 103880) aldose reductase isoform ( 316) 140 41.5 0.0032
NP_064695 (OMIM: 604707) aldo-keto reductase famil ( 316) 135 40.3 0.0072
>>NP_003627 (OMIM: 601142) voltage-gated potassium chann (367 aa)
initn: 2433 init1: 2433 opt: 2433 Z-score: 3091.4 bits: 580.6 E(85289): 1.9e-165
Smith-Waterman score: 2433; 100.0% identity (100.0% similar) in 367 aa overlap (1-367:1-367)
10 20 30 40 50 60
pF1KB3 MYPESTTGSPARLSLRQTGSPGMIYSTRYGSPKRQLQFYRNLGKSGLRVSCLGLGTWVTF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 MYPESTTGSPARLSLRQTGSPGMIYSTRYGSPKRQLQFYRNLGKSGLRVSCLGLGTWVTF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 GGQITDEMAEQLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKKGWRRSSLVITTKIF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 GGQITDEMAEQLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKKGWRRSSLVITTKIF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 WGGKAETERGLSRKHIIEGLKASLERLQLEYVDVVFANRPDPNTPMEETVRAMTHVINQG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 WGGKAETERGLSRKHIIEGLKASLERLQLEYVDVVFANRPDPNTPMEETVRAMTHVINQG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB3 MAMYWGTSRWSSMEIMEAYSVARQFNLTPPICEQAEYHMFQREKVEVQLPELFHKIGVGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 MAMYWGTSRWSSMEIMEAYSVARQFNLTPPICEQAEYHMFQREKVEVQLPELFHKIGVGA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB3 MTWSPLACGIVSGKYDSGIPPYSRASLKGYQWLKDKILSEEGRRQQAKLKELQAIAERLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 MTWSPLACGIVSGKYDSGIPPYSRASLKGYQWLKDKILSEEGRRQQAKLKELQAIAERLG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB3 CTLPQLAIAWCLRNEGVSSVLLGASNADQLMENIGAIQVLPKLSSSIIHEIDSILGNKPY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 CTLPQLAIAWCLRNEGVSSVLLGASNADQLMENIGAIQVLPKLSSSIIHEIDSILGNKPY
310 320 330 340 350 360
pF1KB3 SKKDYRS
:::::::
NP_003 SKKDYRS
>>NP_001186790 (OMIM: 601142) voltage-gated potassium ch (367 aa)
initn: 2433 init1: 2433 opt: 2433 Z-score: 3091.4 bits: 580.6 E(85289): 1.9e-165
Smith-Waterman score: 2433; 100.0% identity (100.0% similar) in 367 aa overlap (1-367:1-367)
10 20 30 40 50 60
pF1KB3 MYPESTTGSPARLSLRQTGSPGMIYSTRYGSPKRQLQFYRNLGKSGLRVSCLGLGTWVTF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MYPESTTGSPARLSLRQTGSPGMIYSTRYGSPKRQLQFYRNLGKSGLRVSCLGLGTWVTF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 GGQITDEMAEQLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKKGWRRSSLVITTKIF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GGQITDEMAEQLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKKGWRRSSLVITTKIF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 WGGKAETERGLSRKHIIEGLKASLERLQLEYVDVVFANRPDPNTPMEETVRAMTHVINQG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 WGGKAETERGLSRKHIIEGLKASLERLQLEYVDVVFANRPDPNTPMEETVRAMTHVINQG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB3 MAMYWGTSRWSSMEIMEAYSVARQFNLTPPICEQAEYHMFQREKVEVQLPELFHKIGVGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAMYWGTSRWSSMEIMEAYSVARQFNLTPPICEQAEYHMFQREKVEVQLPELFHKIGVGA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB3 MTWSPLACGIVSGKYDSGIPPYSRASLKGYQWLKDKILSEEGRRQQAKLKELQAIAERLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MTWSPLACGIVSGKYDSGIPPYSRASLKGYQWLKDKILSEEGRRQQAKLKELQAIAERLG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB3 CTLPQLAIAWCLRNEGVSSVLLGASNADQLMENIGAIQVLPKLSSSIIHEIDSILGNKPY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CTLPQLAIAWCLRNEGVSSVLLGASNADQLMENIGAIQVLPKLSSSIIHEIDSILGNKPY
310 320 330 340 350 360
pF1KB3 SKKDYRS
:::::::
NP_001 SKKDYRS
>>NP_001186789 (OMIM: 601142) voltage-gated potassium ch (367 aa)
initn: 2433 init1: 2433 opt: 2433 Z-score: 3091.4 bits: 580.6 E(85289): 1.9e-165
Smith-Waterman score: 2433; 100.0% identity (100.0% similar) in 367 aa overlap (1-367:1-367)
10 20 30 40 50 60
pF1KB3 MYPESTTGSPARLSLRQTGSPGMIYSTRYGSPKRQLQFYRNLGKSGLRVSCLGLGTWVTF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MYPESTTGSPARLSLRQTGSPGMIYSTRYGSPKRQLQFYRNLGKSGLRVSCLGLGTWVTF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 GGQITDEMAEQLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKKGWRRSSLVITTKIF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GGQITDEMAEQLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKKGWRRSSLVITTKIF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 WGGKAETERGLSRKHIIEGLKASLERLQLEYVDVVFANRPDPNTPMEETVRAMTHVINQG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 WGGKAETERGLSRKHIIEGLKASLERLQLEYVDVVFANRPDPNTPMEETVRAMTHVINQG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB3 MAMYWGTSRWSSMEIMEAYSVARQFNLTPPICEQAEYHMFQREKVEVQLPELFHKIGVGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAMYWGTSRWSSMEIMEAYSVARQFNLTPPICEQAEYHMFQREKVEVQLPELFHKIGVGA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB3 MTWSPLACGIVSGKYDSGIPPYSRASLKGYQWLKDKILSEEGRRQQAKLKELQAIAERLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MTWSPLACGIVSGKYDSGIPPYSRASLKGYQWLKDKILSEEGRRQQAKLKELQAIAERLG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB3 CTLPQLAIAWCLRNEGVSSVLLGASNADQLMENIGAIQVLPKLSSSIIHEIDSILGNKPY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CTLPQLAIAWCLRNEGVSSVLLGASNADQLMENIGAIQVLPKLSSSIIHEIDSILGNKPY
310 320 330 340 350 360
pF1KB3 SKKDYRS
:::::::
NP_001 SKKDYRS
>>XP_011540623 (OMIM: 601142) PREDICTED: voltage-gated p (395 aa)
initn: 2254 init1: 2254 opt: 2254 Z-score: 2863.4 bits: 538.5 E(85289): 9.4e-153
Smith-Waterman score: 2254; 100.0% identity (100.0% similar) in 339 aa overlap (1-339:1-339)
10 20 30 40 50 60
pF1KB3 MYPESTTGSPARLSLRQTGSPGMIYSTRYGSPKRQLQFYRNLGKSGLRVSCLGLGTWVTF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MYPESTTGSPARLSLRQTGSPGMIYSTRYGSPKRQLQFYRNLGKSGLRVSCLGLGTWVTF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 GGQITDEMAEQLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKKGWRRSSLVITTKIF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GGQITDEMAEQLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKKGWRRSSLVITTKIF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 WGGKAETERGLSRKHIIEGLKASLERLQLEYVDVVFANRPDPNTPMEETVRAMTHVINQG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 WGGKAETERGLSRKHIIEGLKASLERLQLEYVDVVFANRPDPNTPMEETVRAMTHVINQG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB3 MAMYWGTSRWSSMEIMEAYSVARQFNLTPPICEQAEYHMFQREKVEVQLPELFHKIGVGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MAMYWGTSRWSSMEIMEAYSVARQFNLTPPICEQAEYHMFQREKVEVQLPELFHKIGVGA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB3 MTWSPLACGIVSGKYDSGIPPYSRASLKGYQWLKDKILSEEGRRQQAKLKELQAIAERLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MTWSPLACGIVSGKYDSGIPPYSRASLKGYQWLKDKILSEEGRRQQAKLKELQAIAERLG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB3 CTLPQLAIAWCLRNEGVSSVLLGASNADQLMENIGAIQVLPKLSSSIIHEIDSILGNKPY
:::::::::::::::::::::::::::::::::::::::
XP_011 CTLPQLAIAWCLRNEGVSSVLLGASNADQLMENIGAIQVRVRGPAGQRAHPSPSPVQCIL
310 320 330 340 350 360
pF1KB3 SKKDYRS
XP_011 PGSSCVPGSVLGTQDAPVNHQSCAPGELAFQQEQT
370 380 390
>>XP_011540624 (OMIM: 601142) PREDICTED: voltage-gated p (395 aa)
initn: 2254 init1: 2254 opt: 2254 Z-score: 2863.4 bits: 538.5 E(85289): 9.4e-153
Smith-Waterman score: 2254; 100.0% identity (100.0% similar) in 339 aa overlap (1-339:1-339)
10 20 30 40 50 60
pF1KB3 MYPESTTGSPARLSLRQTGSPGMIYSTRYGSPKRQLQFYRNLGKSGLRVSCLGLGTWVTF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MYPESTTGSPARLSLRQTGSPGMIYSTRYGSPKRQLQFYRNLGKSGLRVSCLGLGTWVTF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 GGQITDEMAEQLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKKGWRRSSLVITTKIF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GGQITDEMAEQLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKKGWRRSSLVITTKIF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 WGGKAETERGLSRKHIIEGLKASLERLQLEYVDVVFANRPDPNTPMEETVRAMTHVINQG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 WGGKAETERGLSRKHIIEGLKASLERLQLEYVDVVFANRPDPNTPMEETVRAMTHVINQG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB3 MAMYWGTSRWSSMEIMEAYSVARQFNLTPPICEQAEYHMFQREKVEVQLPELFHKIGVGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MAMYWGTSRWSSMEIMEAYSVARQFNLTPPICEQAEYHMFQREKVEVQLPELFHKIGVGA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB3 MTWSPLACGIVSGKYDSGIPPYSRASLKGYQWLKDKILSEEGRRQQAKLKELQAIAERLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MTWSPLACGIVSGKYDSGIPPYSRASLKGYQWLKDKILSEEGRRQQAKLKELQAIAERLG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB3 CTLPQLAIAWCLRNEGVSSVLLGASNADQLMENIGAIQVLPKLSSSIIHEIDSILGNKPY
:::::::::::::::::::::::::::::::::::::::
XP_011 CTLPQLAIAWCLRNEGVSSVLLGASNADQLMENIGAIQVRVRGPAGQRAHPSPSPVQCIL
310 320 330 340 350 360
pF1KB3 SKKDYRS
XP_011 PGSSCVPGSVLGTQDAPVNHQSCAPGELAFQQEQT
370 380 390
>>XP_005263571 (OMIM: 601142) PREDICTED: voltage-gated p (353 aa)
initn: 2179 init1: 2179 opt: 2205 Z-score: 2801.9 bits: 527.0 E(85289): 2.5e-149
Smith-Waterman score: 2299; 96.2% identity (96.2% similar) in 367 aa overlap (1-367:1-353)
10 20 30 40 50 60
pF1KB3 MYPESTTGSPARLSLRQTGSPGMIYSTRYGSPKRQLQFYRNLGKSGLRVSCLGLGTWVTF
::::::::::::::::::::::::: :::::::::::::::::::::
XP_005 MYPESTTGSPARLSLRQTGSPGMIY--------------RNLGKSGLRVSCLGLGTWVTF
10 20 30 40
70 80 90 100 110 120
pF1KB3 GGQITDEMAEQLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKKGWRRSSLVITTKIF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GGQITDEMAEQLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKKGWRRSSLVITTKIF
50 60 70 80 90 100
130 140 150 160 170 180
pF1KB3 WGGKAETERGLSRKHIIEGLKASLERLQLEYVDVVFANRPDPNTPMEETVRAMTHVINQG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 WGGKAETERGLSRKHIIEGLKASLERLQLEYVDVVFANRPDPNTPMEETVRAMTHVINQG
110 120 130 140 150 160
190 200 210 220 230 240
pF1KB3 MAMYWGTSRWSSMEIMEAYSVARQFNLTPPICEQAEYHMFQREKVEVQLPELFHKIGVGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MAMYWGTSRWSSMEIMEAYSVARQFNLTPPICEQAEYHMFQREKVEVQLPELFHKIGVGA
170 180 190 200 210 220
250 260 270 280 290 300
pF1KB3 MTWSPLACGIVSGKYDSGIPPYSRASLKGYQWLKDKILSEEGRRQQAKLKELQAIAERLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MTWSPLACGIVSGKYDSGIPPYSRASLKGYQWLKDKILSEEGRRQQAKLKELQAIAERLG
230 240 250 260 270 280
310 320 330 340 350 360
pF1KB3 CTLPQLAIAWCLRNEGVSSVLLGASNADQLMENIGAIQVLPKLSSSIIHEIDSILGNKPY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 CTLPQLAIAWCLRNEGVSSVLLGASNADQLMENIGAIQVLPKLSSSIIHEIDSILGNKPY
290 300 310 320 330 340
pF1KB3 SKKDYRS
:::::::
XP_005 SKKDYRS
350
>>NP_742128 (OMIM: 601142) voltage-gated potassium chann (353 aa)
initn: 2179 init1: 2179 opt: 2205 Z-score: 2801.9 bits: 527.0 E(85289): 2.5e-149
Smith-Waterman score: 2299; 96.2% identity (96.2% similar) in 367 aa overlap (1-367:1-353)
10 20 30 40 50 60
pF1KB3 MYPESTTGSPARLSLRQTGSPGMIYSTRYGSPKRQLQFYRNLGKSGLRVSCLGLGTWVTF
::::::::::::::::::::::::: :::::::::::::::::::::
NP_742 MYPESTTGSPARLSLRQTGSPGMIY--------------RNLGKSGLRVSCLGLGTWVTF
10 20 30 40
70 80 90 100 110 120
pF1KB3 GGQITDEMAEQLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKKGWRRSSLVITTKIF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_742 GGQITDEMAEQLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKKGWRRSSLVITTKIF
50 60 70 80 90 100
130 140 150 160 170 180
pF1KB3 WGGKAETERGLSRKHIIEGLKASLERLQLEYVDVVFANRPDPNTPMEETVRAMTHVINQG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_742 WGGKAETERGLSRKHIIEGLKASLERLQLEYVDVVFANRPDPNTPMEETVRAMTHVINQG
110 120 130 140 150 160
190 200 210 220 230 240
pF1KB3 MAMYWGTSRWSSMEIMEAYSVARQFNLTPPICEQAEYHMFQREKVEVQLPELFHKIGVGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_742 MAMYWGTSRWSSMEIMEAYSVARQFNLTPPICEQAEYHMFQREKVEVQLPELFHKIGVGA
170 180 190 200 210 220
250 260 270 280 290 300
pF1KB3 MTWSPLACGIVSGKYDSGIPPYSRASLKGYQWLKDKILSEEGRRQQAKLKELQAIAERLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_742 MTWSPLACGIVSGKYDSGIPPYSRASLKGYQWLKDKILSEEGRRQQAKLKELQAIAERLG
230 240 250 260 270 280
310 320 330 340 350 360
pF1KB3 CTLPQLAIAWCLRNEGVSSVLLGASNADQLMENIGAIQVLPKLSSSIIHEIDSILGNKPY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_742 CTLPQLAIAWCLRNEGVSSVLLGASNADQLMENIGAIQVLPKLSSSIIHEIDSILGNKPY
290 300 310 320 330 340
pF1KB3 SKKDYRS
:::::::
NP_742 SKKDYRS
350
>>XP_016858109 (OMIM: 601142) PREDICTED: voltage-gated p (400 aa)
initn: 2179 init1: 2179 opt: 2180 Z-score: 2769.3 bits: 521.2 E(85289): 1.6e-147
Smith-Waterman score: 2180; 97.9% identity (98.8% similar) in 337 aa overlap (31-367:64-400)
10 20 30 40 50 60
pF1KB3 MYPESTTGSPARLSLRQTGSPGMIYSTRYGSPKRQLQFYRNLGKSGLRVSCLGLGTWVTF
. .: . ::::::::::::::::::::::
XP_016 LQRLREVRAAAQARNMESFLRMHGLSLDGCTAQRTGMKYRNLGKSGLRVSCLGLGTWVTF
40 50 60 70 80 90
70 80 90 100 110 120
pF1KB3 GGQITDEMAEQLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKKGWRRSSLVITTKIF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GGQITDEMAEQLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKKGWRRSSLVITTKIF
100 110 120 130 140 150
130 140 150 160 170 180
pF1KB3 WGGKAETERGLSRKHIIEGLKASLERLQLEYVDVVFANRPDPNTPMEETVRAMTHVINQG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 WGGKAETERGLSRKHIIEGLKASLERLQLEYVDVVFANRPDPNTPMEETVRAMTHVINQG
160 170 180 190 200 210
190 200 210 220 230 240
pF1KB3 MAMYWGTSRWSSMEIMEAYSVARQFNLTPPICEQAEYHMFQREKVEVQLPELFHKIGVGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MAMYWGTSRWSSMEIMEAYSVARQFNLTPPICEQAEYHMFQREKVEVQLPELFHKIGVGA
220 230 240 250 260 270
250 260 270 280 290 300
pF1KB3 MTWSPLACGIVSGKYDSGIPPYSRASLKGYQWLKDKILSEEGRRQQAKLKELQAIAERLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MTWSPLACGIVSGKYDSGIPPYSRASLKGYQWLKDKILSEEGRRQQAKLKELQAIAERLG
280 290 300 310 320 330
310 320 330 340 350 360
pF1KB3 CTLPQLAIAWCLRNEGVSSVLLGASNADQLMENIGAIQVLPKLSSSIIHEIDSILGNKPY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CTLPQLAIAWCLRNEGVSSVLLGASNADQLMENIGAIQVLPKLSSSIIHEIDSILGNKPY
340 350 360 370 380 390
pF1KB3 SKKDYRS
:::::::
XP_016 SKKDYRS
400
>>XP_016858107 (OMIM: 601142) PREDICTED: voltage-gated p (420 aa)
initn: 2179 init1: 2179 opt: 2180 Z-score: 2768.9 bits: 521.2 E(85289): 1.7e-147
Smith-Waterman score: 2180; 97.9% identity (98.8% similar) in 337 aa overlap (31-367:84-420)
10 20 30 40 50 60
pF1KB3 MYPESTTGSPARLSLRQTGSPGMIYSTRYGSPKRQLQFYRNLGKSGLRVSCLGLGTWVTF
. .: . ::::::::::::::::::::::
XP_016 LQRLREVRAAAQARNMESFLRMHGLSLDGCTAQRTGMKYRNLGKSGLRVSCLGLGTWVTF
60 70 80 90 100 110
70 80 90 100 110 120
pF1KB3 GGQITDEMAEQLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKKGWRRSSLVITTKIF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GGQITDEMAEQLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKKGWRRSSLVITTKIF
120 130 140 150 160 170
130 140 150 160 170 180
pF1KB3 WGGKAETERGLSRKHIIEGLKASLERLQLEYVDVVFANRPDPNTPMEETVRAMTHVINQG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 WGGKAETERGLSRKHIIEGLKASLERLQLEYVDVVFANRPDPNTPMEETVRAMTHVINQG
180 190 200 210 220 230
190 200 210 220 230 240
pF1KB3 MAMYWGTSRWSSMEIMEAYSVARQFNLTPPICEQAEYHMFQREKVEVQLPELFHKIGVGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MAMYWGTSRWSSMEIMEAYSVARQFNLTPPICEQAEYHMFQREKVEVQLPELFHKIGVGA
240 250 260 270 280 290
250 260 270 280 290 300
pF1KB3 MTWSPLACGIVSGKYDSGIPPYSRASLKGYQWLKDKILSEEGRRQQAKLKELQAIAERLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MTWSPLACGIVSGKYDSGIPPYSRASLKGYQWLKDKILSEEGRRQQAKLKELQAIAERLG
300 310 320 330 340 350
310 320 330 340 350 360
pF1KB3 CTLPQLAIAWCLRNEGVSSVLLGASNADQLMENIGAIQVLPKLSSSIIHEIDSILGNKPY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CTLPQLAIAWCLRNEGVSSVLLGASNADQLMENIGAIQVLPKLSSSIIHEIDSILGNKPY
360 370 380 390 400 410
pF1KB3 SKKDYRS
:::::::
XP_016 SKKDYRS
420
>>XP_016858108 (OMIM: 601142) PREDICTED: voltage-gated p (420 aa)
initn: 2179 init1: 2179 opt: 2180 Z-score: 2768.9 bits: 521.2 E(85289): 1.7e-147
Smith-Waterman score: 2180; 97.9% identity (98.8% similar) in 337 aa overlap (31-367:84-420)
10 20 30 40 50 60
pF1KB3 MYPESTTGSPARLSLRQTGSPGMIYSTRYGSPKRQLQFYRNLGKSGLRVSCLGLGTWVTF
. .: . ::::::::::::::::::::::
XP_016 LQRLREVRAAAQARNMESFLRMHGLSLDGCTAQRTGMKYRNLGKSGLRVSCLGLGTWVTF
60 70 80 90 100 110
70 80 90 100 110 120
pF1KB3 GGQITDEMAEQLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKKGWRRSSLVITTKIF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GGQITDEMAEQLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKKGWRRSSLVITTKIF
120 130 140 150 160 170
130 140 150 160 170 180
pF1KB3 WGGKAETERGLSRKHIIEGLKASLERLQLEYVDVVFANRPDPNTPMEETVRAMTHVINQG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 WGGKAETERGLSRKHIIEGLKASLERLQLEYVDVVFANRPDPNTPMEETVRAMTHVINQG
180 190 200 210 220 230
190 200 210 220 230 240
pF1KB3 MAMYWGTSRWSSMEIMEAYSVARQFNLTPPICEQAEYHMFQREKVEVQLPELFHKIGVGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MAMYWGTSRWSSMEIMEAYSVARQFNLTPPICEQAEYHMFQREKVEVQLPELFHKIGVGA
240 250 260 270 280 290
250 260 270 280 290 300
pF1KB3 MTWSPLACGIVSGKYDSGIPPYSRASLKGYQWLKDKILSEEGRRQQAKLKELQAIAERLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MTWSPLACGIVSGKYDSGIPPYSRASLKGYQWLKDKILSEEGRRQQAKLKELQAIAERLG
300 310 320 330 340 350
310 320 330 340 350 360
pF1KB3 CTLPQLAIAWCLRNEGVSSVLLGASNADQLMENIGAIQVLPKLSSSIIHEIDSILGNKPY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CTLPQLAIAWCLRNEGVSSVLLGASNADQLMENIGAIQVLPKLSSSIIHEIDSILGNKPY
360 370 380 390 400 410
pF1KB3 SKKDYRS
:::::::
XP_016 SKKDYRS
420
367 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 14:07:19 2016 done: Thu Nov 3 14:07:20 2016
Total Scan time: 8.370 Total Display time: 0.060
Function used was FASTA [36.3.4 Apr, 2011]