Result of FASTA (ccds) for
pF1KB3598
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB3598, 1499 aa
1>>>pF1KB3598 1499 - 1499 aa - 1499 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 11.3996+/-0.00148; mu= 4.2686+/- 0.090
mean_var=698.9994+/-146.383, 0's: 0 Z-trim(114.2): 265 B-trim: 481 in 1/54
Lambda= 0.048511
statistics sampled from 14523 (14780) to 14523 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.695), E-opt: 0.2 (0.454), width: 16
Scan time: 5.120
The best scores are: opt bits E(32554)
CCDS33350.1 COL5A2 gene_id:1290|Hs108|chr2 (1499) 11157 797.8 0
CCDS41778.1 COL2A1 gene_id:1280|Hs108|chr12 (1487) 7272 525.9 3.6e-148
CCDS8759.1 COL2A1 gene_id:1280|Hs108|chr12 (1418) 6965 504.4 1e-141
CCDS11561.1 COL1A1 gene_id:1277|Hs108|chr17 (1464) 6194 450.4 1.8e-125
CCDS2297.1 COL3A1 gene_id:1281|Hs108|chr2 (1466) 5603 409.1 5.2e-113
CCDS34682.1 COL1A2 gene_id:1278|Hs108|chr7 (1366) 4613 339.7 3.6e-92
CCDS75932.1 COL5A1 gene_id:1289|Hs108|chr9 (1838) 4381 323.7 3.3e-87
CCDS6982.1 COL5A1 gene_id:1289|Hs108|chr9 (1838) 4379 323.5 3.6e-87
CCDS53348.1 COL11A1 gene_id:1301|Hs108|chr1 (1767) 4366 322.6 6.6e-87
CCDS778.1 COL11A1 gene_id:1301|Hs108|chr1 (1806) 4366 322.6 6.7e-87
CCDS780.2 COL11A1 gene_id:1301|Hs108|chr1 (1690) 4358 322.0 9.6e-87
CCDS43452.1 COL11A2 gene_id:1302|Hs108|chr6 (1650) 3917 291.1 1.8e-77
CCDS12222.1 COL5A3 gene_id:50509|Hs108|chr19 (1745) 3620 270.4 3.4e-71
CCDS6802.1 COL27A1 gene_id:85301|Hs108|chr9 (1860) 3127 235.9 8.7e-61
CCDS9511.1 COL4A1 gene_id:1282|Hs108|chr13 (1669) 3049 230.4 3.6e-59
CCDS41907.1 COL4A2 gene_id:1284|Hs108|chr13 (1712) 2862 217.3 3.2e-55
CCDS42829.1 COL4A3 gene_id:1285|Hs108|chr2 (1670) 2852 216.6 5.1e-55
CCDS42828.1 COL4A4 gene_id:1286|Hs108|chr2 (1690) 2829 215.0 1.6e-54
CCDS76008.1 COL4A6 gene_id:1288|Hs108|chrX (1633) 2744 209.0 9.5e-53
CCDS14542.1 COL4A6 gene_id:1288|Hs108|chrX (1690) 2744 209.1 9.6e-53
CCDS14541.1 COL4A6 gene_id:1288|Hs108|chrX (1691) 2744 209.1 9.6e-53
CCDS76009.1 COL4A6 gene_id:1288|Hs108|chrX (1666) 2733 208.3 1.6e-52
CCDS41297.1 COL16A1 gene_id:1307|Hs108|chr1 (1604) 2669 203.8 3.6e-51
CCDS14543.1 COL4A5 gene_id:1287|Hs108|chrX (1685) 2653 202.7 7.9e-51
CCDS35366.1 COL4A5 gene_id:1287|Hs108|chrX (1691) 2653 202.7 8e-51
CCDS2773.1 COL7A1 gene_id:1294|Hs108|chr3 (2944) 2632 201.6 3e-50
CCDS6376.1 COL22A1 gene_id:169044|Hs108|chr8 (1626) 2621 200.4 3.7e-50
CCDS41353.1 COL24A1 gene_id:255631|Hs108|chr1 (1714) 2209 171.6 1.8e-41
CCDS4970.1 COL19A1 gene_id:1310|Hs108|chr6 (1142) 1954 153.5 3.4e-36
CCDS450.1 COL9A2 gene_id:1298|Hs108|chr1 ( 689) 1907 149.9 2.5e-35
CCDS13505.1 COL9A3 gene_id:1299|Hs108|chr20 ( 684) 1833 144.7 9.1e-34
CCDS47447.1 COL9A1 gene_id:1297|Hs108|chr6 ( 678) 1791 141.8 7e-33
CCDS4971.1 COL9A1 gene_id:1297|Hs108|chr6 ( 921) 1791 142.0 8.2e-33
CCDS42971.1 COL18A1 gene_id:80781|Hs108|chr21 (1339) 1789 142.1 1.1e-32
CCDS42972.1 COL18A1 gene_id:80781|Hs108|chr21 (1519) 1789 142.2 1.2e-32
CCDS77643.1 COL18A1 gene_id:80781|Hs108|chr21 (1754) 1789 142.2 1.3e-32
CCDS44424.2 COL13A1 gene_id:1305|Hs108|chr10 ( 695) 1627 130.3 2e-29
CCDS43553.1 COL28A1 gene_id:340267|Hs108|chr7 (1125) 1592 128.2 1.4e-28
CCDS44419.1 COL13A1 gene_id:1305|Hs108|chr10 ( 717) 1571 126.4 3.1e-28
CCDS44423.2 COL13A1 gene_id:1305|Hs108|chr10 ( 668) 1567 126.1 3.6e-28
CCDS44425.2 COL13A1 gene_id:1305|Hs108|chr10 ( 686) 1557 125.4 6e-28
CCDS403.1 COL8A2 gene_id:1296|Hs108|chr1 ( 703) 1525 123.2 2.8e-27
CCDS5105.1 COL10A1 gene_id:1300|Hs108|chr6 ( 680) 1497 121.2 1.1e-26
CCDS72756.1 COL8A2 gene_id:1296|Hs108|chr1 ( 638) 1482 120.1 2.2e-26
CCDS44427.2 COL13A1 gene_id:1305|Hs108|chr10 ( 645) 1464 118.9 5.2e-26
CCDS2934.1 COL8A1 gene_id:1295|Hs108|chr3 ( 744) 1462 118.8 6.2e-26
CCDS76010.1 COL4A6 gene_id:1288|Hs108|chrX (1707) 1445 118.2 2.3e-25
CCDS7554.1 COL17A1 gene_id:1308|Hs108|chr10 (1497) 1409 115.5 1.2e-24
CCDS44428.2 COL13A1 gene_id:1305|Hs108|chr10 ( 610) 1394 113.9 1.5e-24
CCDS58922.1 COL25A1 gene_id:84570|Hs108|chr4 ( 645) 1367 112.1 5.8e-24
>>CCDS33350.1 COL5A2 gene_id:1290|Hs108|chr2 (1499 aa)
initn: 11157 init1: 11157 opt: 11157 Z-score: 4243.0 bits: 797.8 E(32554): 0
Smith-Waterman score: 11157; 100.0% identity (100.0% similar) in 1499 aa overlap (1-1499:1-1499)
10 20 30 40 50 60
pF1KB3 MMANWAEARPLLILIVLLGQFVSIKAQEEDEDEGYGEEIACTQNGQMYLNRDIWKPAPCQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 MMANWAEARPLLILIVLLGQFVSIKAQEEDEDEGYGEEIACTQNGQMYLNRDIWKPAPCQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 ICVCDNGAILCDKIECQDVLDCADPVTPPGECCPVCSQTPGGGNTNFGRGRKGQKGEPGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 ICVCDNGAILCDKIECQDVLDCADPVTPPGECCPVCSQTPGGGNTNFGRGRKGQKGEPGL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 VPVVTGIRGRPGPAGPPGSQGPRGERGPKGRPGPRGPQGIDGEPGVPGQPGAPGPPGHPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 VPVVTGIRGRPGPAGPPGSQGPRGERGPKGRPGPRGPQGIDGEPGVPGQPGAPGPPGHPS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB3 HPGPDGLSRPFSAQMAGLDEKSGLGSQVGLMPGSVGPVGPRGPQGLQGQQGGAGPTGPPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 HPGPDGLSRPFSAQMAGLDEKSGLGSQVGLMPGSVGPVGPRGPQGLQGQQGGAGPTGPPG
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB3 EPGDPGPMGPIGSRGPEGPPGKPGEDGEPGRNGNPGEVGFAGSPGARGFPGAPGLPGLKG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 EPGDPGPMGPIGSRGPEGPPGKPGEDGEPGRNGNPGEVGFAGSPGARGFPGAPGLPGLKG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB3 HRGHKGLEGPKGEVGAPGSKGEAGPTGPMGAMGPLGPRGMPGERGRLGPQGAPGQRGAHG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 HRGHKGLEGPKGEVGAPGSKGEAGPTGPMGAMGPLGPRGMPGERGRLGPQGAPGQRGAHG
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB3 MPGKPGPMGPLGIPGSSGFPGNPGMKGEAGPTGARGPEGPQGQRGETGPPGPVGSPGLPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 MPGKPGPMGPLGIPGSSGFPGNPGMKGEAGPTGARGPEGPQGQRGETGPPGPVGSPGLPG
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB3 AIGTDGTPGAKGPTGSPGTSGPPGSAGPPGSPGPQGSTGPQGIRGQPGDPGVPGFKGEAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 AIGTDGTPGAKGPTGSPGTSGPPGSAGPPGSPGPQGSTGPQGIRGQPGDPGVPGFKGEAG
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB3 PKGEPGPHGIQGPIGPPGEEGKRGPRGDPGTVGPPGPVGERGAPGNRGFPGSDGLPGPKG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 PKGEPGPHGIQGPIGPPGEEGKRGPRGDPGTVGPPGPVGERGAPGNRGFPGSDGLPGPKG
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB3 AQGERGPVGSSGPKGSQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPLGAPGEDGRPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 AQGERGPVGSSGPKGSQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPLGAPGEDGRPG
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB3 PPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPGQRGAPGKDGEVGPSGPVGPPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 PPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPGQRGAPGKDGEVGPSGPVGPPG
610 620 630 640 650 660
670 680 690 700 710 720
pF1KB3 LAGERGEQGPPGPTGFQGLPGPPGPPGEGGKPGDQGVPGDPGAVGPLGPRGERGNPGERG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 LAGERGEQGPPGPTGFQGLPGPPGPPGEGGKPGDQGVPGDPGAVGPLGPRGERGNPGERG
670 680 690 700 710 720
730 740 750 760 770 780
pF1KB3 EPGITGLPGEKGMAGGHGPDGPKGSPGPSGTPGDTGPPGLQGMPGERGIAGTPGPKGDRG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 EPGITGLPGEKGMAGGHGPDGPKGSPGPSGTPGDTGPPGLQGMPGERGIAGTPGPKGDRG
730 740 750 760 770 780
790 800 810 820 830 840
pF1KB3 GIGEKGAEGTAGNDGARGLPGPLGPPGPAGPTGEKGEPGPRGLVGPPGSRGNPGSRGENG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 GIGEKGAEGTAGNDGARGLPGPLGPPGPAGPTGEKGEPGPRGLVGPPGSRGNPGSRGENG
790 800 810 820 830 840
850 860 870 880 890 900
pF1KB3 PTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPGPHGPNGVPGLKGGRG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 PTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPGPHGPNGVPGLKGGRG
850 860 870 880 890 900
910 920 930 940 950 960
pF1KB3 TQGPPGATGFPGSAGRVGPPGPAGAPGPAGPLGEPGKEGPPGLRGDPGSHGRVGDRGPAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 TQGPPGATGFPGSAGRVGPPGPAGAPGPAGPLGEPGKEGPPGLRGDPGSHGRVGDRGPAG
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KB3 PPGGPGDKGDPGEDGQPGPDGPPGPAGTTGQRGIVGMPGQRGERGMPGLPGPAGTPGKVG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 PPGGPGDKGDPGEDGQPGPDGPPGPAGTTGQRGIVGMPGQRGERGMPGLPGPAGTPGKVG
970 980 990 1000 1010 1020
1030 1040 1050 1060 1070 1080
pF1KB3 PTGATGDKGPPGPVGPPGSNGPVGEPGPEGPAGNDGTPGRDGAVGERGDRGDPGPAGLPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 PTGATGDKGPPGPVGPPGSNGPVGEPGPEGPAGNDGTPGRDGAVGERGDRGDPGPAGLPG
1030 1040 1050 1060 1070 1080
1090 1100 1110 1120 1130 1140
pF1KB3 SQGAPGTPGPVGAPGDAGQRGDPGSRGPIGPPGRAGKRGLPGPQGPRGDKGDHGDRGDRG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 SQGAPGTPGPVGAPGDAGQRGDPGSRGPIGPPGRAGKRGLPGPQGPRGDKGDHGDRGDRG
1090 1100 1110 1120 1130 1140
1150 1160 1170 1180 1190 1200
pF1KB3 QKGHRGFTGLQGLPGPPGPNGEQGSAGIPGPFGPRGPPGPVGPSGKEGNPGPLGPIGPPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 QKGHRGFTGLQGLPGPPGPNGEQGSAGIPGPFGPRGPPGPVGPSGKEGNPGPLGPIGPPG
1150 1160 1170 1180 1190 1200
1210 1220 1230 1240 1250 1260
pF1KB3 VRGSVGEAGPEGPPGEPGPPGPPGPPGHLTAALGDIMGHYDESMPDPLPEFTEDQAAPDD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 VRGSVGEAGPEGPPGEPGPPGPPGPPGHLTAALGDIMGHYDESMPDPLPEFTEDQAAPDD
1210 1220 1230 1240 1250 1260
1270 1280 1290 1300 1310 1320
pF1KB3 KNKTDPGVHATLKSLSSQIETMRSPDGSKKHPARTCDDLKLCHSAKQSGEYWIDPNQGSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 KNKTDPGVHATLKSLSSQIETMRSPDGSKKHPARTCDDLKLCHSAKQSGEYWIDPNQGSV
1270 1280 1290 1300 1310 1320
1330 1340 1350 1360 1370 1380
pF1KB3 EDAIKVYCNMETGETCISANPSSVPRKTWWASKSPDNKPVWYGLDMNRGSQFAYGDHQSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 EDAIKVYCNMETGETCISANPSSVPRKTWWASKSPDNKPVWYGLDMNRGSQFAYGDHQSP
1330 1340 1350 1360 1370 1380
1390 1400 1410 1420 1430 1440
pF1KB3 NTAITQMTFLRLLSKEASQNITYICKNSVGYMDDQAKNLKKAVVLKGANDLDIKAEGNIR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 NTAITQMTFLRLLSKEASQNITYICKNSVGYMDDQAKNLKKAVVLKGANDLDIKAEGNIR
1390 1400 1410 1420 1430 1440
1450 1460 1470 1480 1490
pF1KB3 FRYIVLQDTCSKRNGNVGKTVFEYRTQNVARLPIIDLAPVDVGGTDQEFGVEIGPVCFV
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 FRYIVLQDTCSKRNGNVGKTVFEYRTQNVARLPIIDLAPVDVGGTDQEFGVEIGPVCFV
1450 1460 1470 1480 1490
>>CCDS41778.1 COL2A1 gene_id:1280|Hs108|chr12 (1487 aa)
initn: 9564 init1: 6185 opt: 7272 Z-score: 2773.6 bits: 525.9 E(32554): 3.6e-148
Smith-Waterman score: 7277; 65.3% identity (79.4% similar) in 1494 aa overlap (12-1499:10-1487)
10 20 30 40 50 60
pF1KB3 MMANWAEARPLLILIVLLGQFVSIKAQEEDEDEGYGEEIACTQNGQMYLNRDIWKPAPCQ
:.:..:: : .. : .: .:. : .:.:.:: : ..:.::: ::.
CCDS41 MIRLGAPQTLVLLTLLVAAV-LRCQGQDVQEA-G---SCVQDGQRYNDKDVWKPEPCR
10 20 30 40 50
70 80 90 100 110
pF1KB3 ICVCDNGAILCDKIECQDVLDCADPVTPPGECCPVCSQTPGGGNTNFGR-GRKGQKGEPG
:::::.:..::: : :.:: :: .: : :::::.: : : :. : ::::::::
CCDS41 ICVCDTGTVLCDDIICEDVKDCLSPEIPFGECCPIC---PTDLATASGQPGPKGQKGEPG
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB3 LVPVVTGIRGRPGPAGPPGSQGPRGERGPKGRPGPRGPQGIDGEPGVPGQPGAPGPPGHP
. ..: .: ::: :: : :::::.:: ::. : ::.: :::::.::.:: ::::: :
CCDS41 DIKDIVGPKGPPGPQGPAGEQGPRGDRGDKGEKGAPGPRGRDGEPGTPGNPGPPGPPG-P
120 130 140 150 160
180 190 200 210 220 230
pF1KB3 SHPGPDGLSRPFSAQMAG-LDEKSGLGSQVGLMPGSVGPVGPRGPQGLQGQQGGAGPTGP
::: ::. :.::::: .:::.: :.:.:.: : .::.::::: : : : : :
CCDS41 --PGPPGLGGNFAAQMAGGFDEKAG-GAQLGVMQGPMGPMGPRGPPGPAGAPGPQGFQGN
170 180 190 200 210 220
240 250 260 270 280 290
pF1KB3 PGEPGDPGPMGPIGSRGPEGPPGKPGEDGEPGRNGNPGEVGFAGSPGARGFPGAPGLPGL
:::::.:: ::.: ::: :::::::.::: :. :. :: : : :::::::.:::::.
CCDS41 PGEPGEPGVSGPMGPRGPPGPPGKPGDDGEAGKPGKAGERGPPGPQGARGFPGTPGLPGV
230 240 250 260 270 280
300 310 320 330 340 350
pF1KB3 KGHRGHKGLEGPKGEVGAPGSKGEAGPTGPMGAMGPLGPRGMPGERGRLGPQGAPGQRGA
:::::. ::.: :::.:::: :::.: : :. ::.::::.:::::: :: :: : ::
CCDS41 KGHRGYPGLDGAKGEAGAPGVKGESGSPGENGSPGPMGPRGLPGERGRTGPAGAAGARGN
290 300 310 320 330 340
360 370 380 390 400 410
pF1KB3 HGMPGKPGPMGPLGIPGSSGFPGNPGMKGEAGPTGARGPEGPQGQRGETGPPGPVGSPGL
:.:: :: ::.: :. :::: :: :::::::::::::: :: ::: : :: : :
CCDS41 DGQPGPAGPPGPVGPAGGPGFPGAPGAKGEAGPTGARGPEGAQGPRGEPGTPGSPGPAGA
350 360 370 380 390 400
420 430 440 450 460 470
pF1KB3 PGAIGTDGTPGAKGPTGSPGTSGPPGSAGPPGSPGPQGSTGPQGIRGQPGDPGVPGFKGE
: :::: ::::: .:.:: .: :: :: : :::::.::: : .:: :.::. :::::
CCDS41 SGNPGTDGIPGAKGSAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGE
410 420 430 440 450 460
480 490 500 510 520 530
pF1KB3 AGPKGEPGPHGIQGPIGPPGEEGKRGPRGDPGTVGPPGPVGERGAPGNRGFPGSDGLPGP
:::::::: : :: :: ::::::: ::.:: ::: :: :::::::::::::.::: ::
CCDS41 QGPKGEPGPAGPQGAPGPAGEEGKRGARGEPGGVGPIGPPGERGAPGNRGFPGQDGLAGP
470 480 490 500 510 520
540 550 560 570 580 590
pF1KB3 KGAQGERGPVGSSGPKGSQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPLGAPGEDGR
::: ::::: : .::::..::::::::::::::::::: :: ::.::.:: ::::::::
CCDS41 KGAPGERGPSGLAGPKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAPGEDGR
530 540 550 560 570 580
600 610 620 630 640 650
pF1KB3 PGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPGQRGAPGKDGEVGPSGPVGP
::::: : ::::: ::.:::::..:.::: :: : :.:: :: ::::::.: .:: ::
CCDS41 PGPPGPQGARGQPGVMGFPGPKGANGEPGKAGEKGLPGAPGLRGLPGKDGETGAAGPPGP
590 600 610 620 630 640
660 670 680 690 700 710
pF1KB3 PGLAGERGEQGPPGPTGFQGLPGPPGPPGEGGKPGDQGVPGDPGAVGPLGPRGERGNPGE
: :::::::: :::.:::::::::::::::::::::::::. :: : .::::::: :::
CCDS41 AGPAGERGEQGAPGPSGFQGLPGPPGPPGEGGKPGDQGVPGEAGAPGLVGPRGERGFPGE
650 660 670 680 690 700
720 730 740 750 760 770
pF1KB3 RGEPGITGLPGEKGMAGGHGPDGPKGSPGPSGTPGDTGPPGLQGMPGERGIAGTPGPKGD
:: :: :: : .:. : : :::::. ::.: :: ::::::::::::: :: :::::
CCDS41 RGSPGAQGLQGPRGLPGTPGTDGPKGASGPAGPPGAQGPPGLQGMPGERGAAGIAGPKGD
710 720 730 740 750 760
780 790 800 810 820 830
pF1KB3 RGGIGEKGAEGTAGNDGARGLPGPLGPPGPAGPTGEKGEPGPRGLVGPPGSRGNPGSRGE
:: .:::: ::. :.::.::: ::.::::::: .::::: :: : .: :.:: :: :::
CCDS41 RGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEVGPPGPAGSAGARGAPGERGE
770 780 790 800 810 820
840 850 860 870 880 890
pF1KB3 NGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPGPHGPNGVPGLKGG
.:: : .::::: : :::::.::: :: :::::::.::::: .:.:::.::.:: : ::.
CCDS41 TGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGA
830 840 850 860 870 880
900 910 920 930 940 950
pF1KB3 RGTQGPPGATGFPGSAGRVGPPGPAGAPGPAGPLGEPGKEGPPGLRGDPGSHGRVGDRGP
::.:::::::::::.:::::::: : ::: :: : ::.:: : ::: : ::.:. :
CCDS41 RGAQGPPGATGFPGAAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARGDSGPPGRAGEPGL
890 900 910 920 930 940
960 970 980 990 1000 1010
pF1KB3 AGPPGGPGDKGDPGEDGQPGPDGPPGPAGTTGQRGIVGMPGQRGERGMPGLPGPAGTPGK
:: : ::.::.::.:: : .::::: : .:::::::.::::::::.::::::.: :::
CCDS41 QGPAGPPGEKGEPGDDGPSGAEGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGK
950 960 970 980 990 1000
1020 1030 1040 1050 1060 1070
pF1KB3 VGPTGATGDKGPPGPVGPPGSNGPVGEPGPEGPAGNDGTPGRDGAVGERGDRGDPGPAGL
: ::.::.:::::::::: .::.:::: :: : :: ::::::.: .::::. : .:
CCDS41 QGAPGASGDRGPPGPVGPPGLTGPAGEPGREGSPGADGPPGRDGAAGVKGDRGETGAVGA
1010 1020 1030 1040 1050 1060
1080 1090 1100 1110 1120 1130
pF1KB3 PGSQGAPGTPGPVGAPGDAGQRGDPGSRGPIGPPGRAGKRGLPGPQGPRGDKGDHGDRGD
::. : ::.:::.: : :.::. :..::.:: : :: ::. ::::::::::. :. :.
CCDS41 PGAPGPPGSPGPAGPTGKQGDRGEAGAQGPMGPSGPAGARGIQGPQGPRGDKGEAGEPGE
1070 1080 1090 1100 1110 1120
1140 1150 1160 1170 1180 1190
pF1KB3 RGQKGHRGFTGLQGLPGPPGPNGEQGSAGIPGPFGPRGPPGPVGPSGKEGNPGPLGPIGP
:: ::::::::::::::::::.:.::..: :: ::::::::::::::.: : :::::
CCDS41 RGLKGHRGFTGLQGLPGPPGPSGDQGASGPAGPSGPRGPPGPVGPSGKDGANGIPGPIGP
1130 1140 1150 1160 1170 1180
1200 1210 1220 1230 1240 1250
pF1KB3 PGVRGSVGEAGPEGPPGEPGPPGPPGPPG---HLTAALGDIMGHYDESMPDPLPEFTEDQ
:: :: ::.:: ::::.::::::::::: ..: : .: ... :::: . ::
CCDS41 PGPRGRSGETGPAGPPGNPGPPGPPGPPGPGIDMSAFAG--LGPREKG-PDPLQYMRADQ
1190 1200 1210 1220 1230 1240
1260 1270 1280 1290 1300 1310
pF1KB3 AAPDDKNKTDPGVHATLKSLSSQIETMRSPDGSKKHPARTCDDLKLCHSAKQSGEYWIDP
:: ... : : ::::::..:::..:::.::.:.::::: :::::: .::.:::::
CCDS41 AAGGLRQH-DAEVDATLKSLNNQIESIRSPEGSRKNPARTCRDLKLCHPEWKSGDYWIDP
1250 1260 1270 1280 1290 1300
1320 1330 1340 1350 1360 1370
pF1KB3 NQGSVEDAIKVYCNMETGETCISANPSSVPRKTWWASKSPDNKPVWYGLDMNRGSQFAYG
::: . ::.::.:::::::::. ::..::.:.::.::: ..: .:.: .: : .:.::
CCDS41 NQGCTLDAMKVFCNMETGETCVYPNPANVPKKNWWSSKSKEKKHIWFGETINGGFHFSYG
1310 1320 1330 1340 1350 1360
1380 1390 1400 1410 1420 1430
pF1KB3 DHQ-SPNTAITQMTFLRLLSKEASQNITYICKNSVGYMDDQAKNLKKAVVLKGANDLDIK
: . .:::: .::::::::: :.:::::: ::::..:.:. : :::::....:.::..:.
CCDS41 DDNLAPNTANVQMTFLRLLSTEGSQNITYHCKNSIAYLDEAAGNLKKALLIQGSNDVEIR
1370 1380 1390 1400 1410 1420
1440 1450 1460 1470 1480 1490
pF1KB3 AEGNIRFRYIVLQDTCSKRNGNVGKTVFEYRTQNVARLPIIDLAPVDVGGTDQEFGVEIG
:::: :: : .:.: :.:..:. ::::.:::.:...::::::.::.:.:: .:::::.::
CCDS41 AEGNSRFTYTALKDGCTKHTGKWGKTVIEYRSQKTSRLPIIDIAPMDIGGPEQEFGVDIG
1430 1440 1450 1460 1470 1480
pF1KB3 PVCFV
::::.
CCDS41 PVCFL
>>CCDS8759.1 COL2A1 gene_id:1280|Hs108|chr12 (1418 aa)
initn: 9564 init1: 6185 opt: 6965 Z-score: 2657.7 bits: 504.4 E(32554): 1e-141
Smith-Waterman score: 6965; 66.7% identity (80.1% similar) in 1395 aa overlap (110-1499:32-1418)
80 90 100 110 120 130
pF1KB3 LDCADPVTPPGECCPVCSQTPGGGNTNFGRGRKGQKGEPGLVPVVTGIRGRPGPAGPPGS
: :::::::: . ..: .: ::: :: :
CCDS87 IRLGAPQTLVLLTLLVAAVLRCQGQDVRQPGPKGQKGEPGDIKDIVGPKGPPGPQGPAGE
10 20 30 40 50 60
140 150 160 170 180 190
pF1KB3 QGPRGERGPKGRPGPRGPQGIDGEPGVPGQPGAPGPPGHPSHPGPDGLSRPFSAQMAG-L
:::::.:: ::. : ::.: :::::.::.:: ::::: : ::: ::. :.::::: .
CCDS87 QGPRGDRGDKGEKGAPGPRGRDGEPGTPGNPGPPGPPG-P--PGPPGLGGNFAAQMAGGF
70 80 90 100 110
200 210 220 230 240 250
pF1KB3 DEKSGLGSQVGLMPGSVGPVGPRGPQGLQGQQGGAGPTGPPGEPGDPGPMGPIGSRGPEG
:::.: :.:.:.: : .::.::::: : : : : : :::::.:: ::.: ::: :
CCDS87 DEKAG-GAQLGVMQGPMGPMGPRGPPGPAGAPGPQGFQGNPGEPGEPGVSGPMGPRGPPG
120 130 140 150 160 170
260 270 280 290 300 310
pF1KB3 PPGKPGEDGEPGRNGNPGEVGFAGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEVGAPG
::::::.::: :. :. :: : : :::::::.:::::.:::::. ::.: :::.::::
CCDS87 PPGKPGDDGEAGKPGKAGERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKGEAGAPG
180 190 200 210 220 230
320 330 340 350 360 370
pF1KB3 SKGEAGPTGPMGAMGPLGPRGMPGERGRLGPQGAPGQRGAHGMPGKPGPMGPLGIPGSSG
:::.: : :. ::.::::.:::::: :: :: : :: :.:: :: ::.: :. :
CCDS87 VKGESGSPGENGSPGPMGPRGLPGERGRTGPAGAAGARGNDGQPGPAGPPGPVGPAGGPG
240 250 260 270 280 290
380 390 400 410 420 430
pF1KB3 FPGNPGMKGEAGPTGARGPEGPQGQRGETGPPGPVGSPGLPGAIGTDGTPGAKGPTGSPG
::: :: :::::::::::::: :: ::: : :: : : : :::: ::::: .:.::
CCDS87 FPGAPGAKGEAGPTGARGPEGAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAGAPG
300 310 320 330 340 350
440 450 460 470 480 490
pF1KB3 TSGPPGSAGPPGSPGPQGSTGPQGIRGQPGDPGVPGFKGEAGPKGEPGPHGIQGPIGPPG
.: :: :: : :::::.::: : .:: :.::. ::::: :::::::: : :: :: :
CCDS87 IAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAG
360 370 380 390 400 410
500 510 520 530 540 550
pF1KB3 EEGKRGPRGDPGTVGPPGPVGERGAPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGSQG
:::::: ::.:: ::: :: :::::::::::::.::: ::::: ::::: : .::::..:
CCDS87 EEGKRGARGEPGGVGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANG
420 430 440 450 460 470
560 570 580 590 600 610
pF1KB3 DPGRPGEPGLPGARGLTGNPGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPG
:::::::::::::::::: :: ::.::.:: ::::::::::::: : ::::: ::.::
CCDS87 DPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPGVMGFPG
480 490 500 510 520 530
620 630 640 650 660 670
pF1KB3 PKGSSGDPGKPGEAGNAGVPGQRGAPGKDGEVGPSGPVGPPGLAGERGEQGPPGPTGFQG
:::..:.::: :: : :.:: :: ::::::.: .:: :: : :::::::: :::.::::
CCDS87 PKGANGEPGKAGEKGLPGAPGLRGLPGKDGETGAAGPPGPAGPAGERGEQGAPGPSGFQG
540 550 560 570 580 590
680 690 700 710 720 730
pF1KB3 LPGPPGPPGEGGKPGDQGVPGDPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHG
:::::::::::::::::::::. :: : .::::::: ::::: :: :: : .:. : :
CCDS87 LPGPPGPPGEGGKPGDQGVPGEAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPG
600 610 620 630 640 650
740 750 760 770 780 790
pF1KB3 PDGPKGSPGPSGTPGDTGPPGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARG
:::::. ::.: :: ::::::::::::: :: ::::::: .:::: ::. :.::.::
CCDS87 TDGPKGASGPAGPPGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRG
660 670 680 690 700 710
800 810 820 830 840 850
pF1KB3 LPGPLGPPGPAGPTGEKGEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPG
: ::.::::::: .::::: :: : .: :.:: :: :::.:: : .::::: : :::::
CCDS87 LTGPIGPPGPAGANGEKGEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPG
720 730 740 750 760 770
860 870 880 890 900 910
pF1KB3 VKGEPGEPGQKGDAGSPGPQGLAGSPGPHGPNGVPGLKGGRGTQGPPGATGFPGSAGRVG
.::: :: :::::::.::::: .:.:::.::.:: : ::.::.:::::::::::.:::::
CCDS87 AKGEQGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVG
780 790 800 810 820 830
920 930 940 950 960 970
pF1KB3 PPGPAGAPGPAGPLGEPGKEGPPGLRGDPGSHGRVGDRGPAGPPGGPGDKGDPGEDGQPG
::: : ::: :: : ::.:: : ::: : ::.:. : :: : ::.::.::.:: :
CCDS87 PPGSNGNPGPPGPPGPSGKDGPKGARGDSGPPGRAGEPGLQGPAGPPGEKGEPGDDGPSG
840 850 860 870 880 890
980 990 1000 1010 1020 1030
pF1KB3 PDGPPGPAGTTGQRGIVGMPGQRGERGMPGLPGPAGTPGKVGPTGATGDKGPPGPVGPPG
.::::: : .:::::::.::::::::.::::::.: ::: : ::.::.::::::::::
CCDS87 AEGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPGPVGPPG
900 910 920 930 940 950
1040 1050 1060 1070 1080 1090
pF1KB3 SNGPVGEPGPEGPAGNDGTPGRDGAVGERGDRGDPGPAGLPGSQGAPGTPGPVGAPGDAG
.::.:::: :: : :: ::::::.: .::::. : .: ::. : ::.:::.: : :
CCDS87 LTGPAGEPGREGSPGADGPPGRDGAAGVKGDRGETGAVGAPGAPGPPGSPGPAGPTGKQG
960 970 980 990 1000 1010
1100 1110 1120 1130 1140 1150
pF1KB3 QRGDPGSRGPIGPPGRAGKRGLPGPQGPRGDKGDHGDRGDRGQKGHRGFTGLQGLPGPPG
.::. :..::.:: : :: ::. ::::::::::. :. :.:: :::::::::::::::::
CCDS87 DRGEAGAQGPMGPSGPAGARGIQGPQGPRGDKGEAGEPGERGLKGHRGFTGLQGLPGPPG
1020 1030 1040 1050 1060 1070
1160 1170 1180 1190 1200 1210
pF1KB3 PNGEQGSAGIPGPFGPRGPPGPVGPSGKEGNPGPLGPIGPPGVRGSVGEAGPEGPPGEPG
:.:.::..: :: ::::::::::::::.: : ::::::: :: ::.:: ::::.::
CCDS87 PSGDQGASGPAGPSGPRGPPGPVGPSGKDGANGIPGPIGPPGPRGRSGETGPAGPPGNPG
1080 1090 1100 1110 1120 1130
1220 1230 1240 1250 1260 1270
pF1KB3 PPGPPGPPG---HLTAALGDIMGHYDESMPDPLPEFTEDQAAPDDKNKTDPGVHATLKSL
::::::::: ..: : .: ... :::: . :::: . . : : ::::::
CCDS87 PPGPPGPPGPGIDMSAFAG--LGPREKG-PDPLQYMRADQAAGGLR-QHDAEVDATLKSL
1140 1150 1160 1170 1180 1190
1280 1290 1300 1310 1320 1330
pF1KB3 SSQIETMRSPDGSKKHPARTCDDLKLCHSAKQSGEYWIDPNQGSVEDAIKVYCNMETGET
..:::..:::.::.:.::::: :::::: .::.:::::::: . ::.::.::::::::
CCDS87 NNQIESIRSPEGSRKNPARTCRDLKLCHPEWKSGDYWIDPNQGCTLDAMKVFCNMETGET
1200 1210 1220 1230 1240 1250
1340 1350 1360 1370 1380 1390
pF1KB3 CISANPSSVPRKTWWASKSPDNKPVWYGLDMNRGSQFAYGDHQ-SPNTAITQMTFLRLLS
:. ::..::.:.::.::: ..: .:.: .: : .:.::: . .:::: .:::::::::
CCDS87 CVYPNPANVPKKNWWSSKSKEKKHIWFGETINGGFHFSYGDDNLAPNTANVQMTFLRLLS
1260 1270 1280 1290 1300 1310
1400 1410 1420 1430 1440 1450
pF1KB3 KEASQNITYICKNSVGYMDDQAKNLKKAVVLKGANDLDIKAEGNIRFRYIVLQDTCSKRN
:.:::::: ::::..:.:. : :::::....:.::..:.:::: :: : .:.: :.:..
CCDS87 TEGSQNITYHCKNSIAYLDEAAGNLKKALLIQGSNDVEIRAEGNSRFTYTALKDGCTKHT
1320 1330 1340 1350 1360 1370
1460 1470 1480 1490
pF1KB3 GNVGKTVFEYRTQNVARLPIIDLAPVDVGGTDQEFGVEIGPVCFV
:. ::::.:::.:...::::::.::.:.:: .:::::.::::::.
CCDS87 GKWGKTVIEYRSQKTSRLPIIDIAPMDIGGPEQEFGVDIGPVCFL
1380 1390 1400 1410
>>CCDS11561.1 COL1A1 gene_id:1277|Hs108|chr17 (1464 aa)
initn: 8325 init1: 4975 opt: 6194 Z-score: 2365.9 bits: 450.4 E(32554): 1.8e-125
Smith-Waterman score: 6479; 59.6% identity (72.8% similar) in 1502 aa overlap (11-1499:7-1464)
10 20 30 40 50
pF1KB3 MMANWAEARPLLILIVLLGQFVSIKAQEEDEDEGYGEEI---ACTQNGQMYLNRDIWKPA
: .:..: . . ..::: . :: :.: .:.::: : .::.:::
CCDS11 MFSFVDLRLLLLLAATALLTHGQEEGQVEGQDEDIPPITCVQNGLRYHDRDVWKPE
10 20 30 40 50
60 70 80 90 100 110
pF1KB3 PCQICVCDNGAILCDKIECQDVLDCADPVTPPGECCPVCSQTPGGGNTNFGRGRKGQKGE
::.::::::: .::: . :... .: .: ::::::: : :...
CCDS11 PCRICVCDNGKVLCDDVICDETKNCPGAEVPEGECCPVC---PDGSES------------
60 70 80 90 100
120 130 140 150 160 170
pF1KB3 PGLVPVVTGIRGRPGPAGPPGSQGPRGERGPKGRPGPRGPQGIDGEPGVPGQPGAPGPPG
: : .::.:. ::.: :::: : :. :.::::: :::::
CCDS11 -------------PTDQETTGVEGPKGDTGPRG---PRGPAGPPGRDGIPGQPGLPGPPG
110 120 130 140
180 190 200 210 220 230
pF1KB3 HPSHPGPDGLSRPFSAQMA-GLDEKSGLGSQVGLMPGSVGPVGPRGPQGLQGQQGGAGPT
:. ::: ::. :. :.. : :::: : .: :: .:: :::: : : : :
CCDS11 PPGPPGPPGLGGNFAPQLSYGYDEKSTGGISV---PGPMGPSGPRGLPGPPGAPGPQGFQ
150 160 170 180 190 200
240 250 260 270 280 290
pF1KB3 GPPGEPGDPGPMGPIGSRGPEGPPGKPGEDGEPGRNGNPGEVGFAGSPGARGFPGAPGLP
:::::::.:: ::.: ::: ::::: :.::: :. : ::: : : ::::.::. :::
CCDS11 GPPGEPGEPGASGPMGPRGPPGPPGKNGDDGEAGKPGRPGERGPPGPQGARGLPGTAGLP
210 220 230 240 250 260
300 310 320 330 340 350
pF1KB3 GLKGHRGHKGLEGPKGEVGAPGSKGEAGPTGPMGAMGPLGPRGMPGERGRLGPQGAPGQR
:.::::: .::.: ::..: : ::: : : :: : .::::.:::::: : : : :
CCDS11 GMKGHRGFSGLDGAKGDAGPAGPKGEPGSPGENGAPGQMGPRGLPGERGRPGAPGPAGAR
270 280 290 300 310 320
360 370 380 390 400 410
pF1KB3 GAHGMPGKPGPMGPLGIPGSSGFPGNPGMKGEAGPTGARGPEGPQGQRGETGPPGPVGSP
: : : :: :: : : :::: : :::::: : :: ::::: ::: :::::.:.
CCDS11 GNDGATGAAGPPGPTGPAGPPGFPGAVGAKGEAGPQGPRGSEGPQGVRGEPGPPGPAGAA
330 340 350 360 370 380
420 430 440 450 460 470
pF1KB3 GLPGAIGTDGTPGAKGPTGSPGTSGPPGSAGPPGSPGPQGSTGPQGIRGQPGDPGVPGFK
: : :.:: ::::: .:.:: .: :: : : :::: :: : .:. :.::.:: :
CCDS11 GPAGNPGADGQPGAKGANGAPGIAGAPGFPGARGPSGPQGPGGPPGPKGNSGEPGAPGSK
390 400 410 420 430 440
480 490 500 510 520 530
pF1KB3 GEAGPKGEPGPHGIQGPIGPPGEEGKRGPRGDPGTVGPPGPVGERGAPGNRGFPGSDGLP
:..: :::::: :.::: :: ::::::: ::.:: .: ::: ::::.::.:::::.::.
CCDS11 GDTGAKGEPGPVGVQGPPGPAGEEGKRGARGEPGPTGLPGPPGERGGPGSRGFPGADGVA
450 460 470 480 490 500
540 550 560 570 580 590
pF1KB3 GPKGAQGERGPVGSSGPKGSQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPLGAPGED
:::: :::: : .::::: :. ::::: :::::.::::.:: ::.:: :: : :.:
CCDS11 GPKGPAGERGSPGPAGPKGSPGEAGRPGEAGLPGAKGLTGSPGSPGPDGKTGPPGPAGQD
510 520 530 540 550 560
600 610 620 630 640 650
pF1KB3 GRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPGQRGAPGKDGEVGPSGPV
::::::: : ::: : ::.:::::..:.::: :: : : :: : :::::.: .::
CCDS11 GRPGPPGPPGARGQAGVMGFPGPKGAAGEPGKAGERGVPGPPGAVGPAGKDGEAGAQGPP
570 580 590 600 610 620
660 670 680 690 700 710
pF1KB3 GPPGLAGERGEQGPPGPTGFQGLPGPPGPPGEGGKPGDQGVPGDPGAVGPLGPRGERGNP
:: : ::::::::: : :::::::: :::::.::::.:::::: :: :: : ::::: :
CCDS11 GPAGPAGERGEQGPAGSPGFQGLPGPAGPPGEAGKPGEQGVPGDLGAPGPSGARGERGFP
630 640 650 660 670 680
720 730 740 750 760 770
pF1KB3 GERGEPGITGLPGEKGMAGGHGPDGPKGSPGPSGTPGDTGPPGLQGMPGERGIAGTPGPK
:::: : : : .: :. : :: ::. : :.::. : ::::::::::: :: ::::
CCDS11 GERGVQGPPGPAGPRGANGAPGNDGAKGDAGAPGAPGSQGAPGLQGMPGERGAAGLPGPK
690 700 710 720 730 740
780 790 800 810 820 830
pF1KB3 GDRGGIGEKGAEGTAGNDGARGLPGPLGPPGPAGPTGEKGEPGPRGLVGPPGSRGNPGSR
:::: : :::.:. :.::.::: ::.::::::: :.::: :: : .:: :.:: ::.:
CCDS11 GDRGDAGPKGADGSPGKDGVRGLTGPIGPPGPAGAPGDKGESGPSGPAGPTGARGAPGDR
750 760 770 780 790 800
840 850 860 870 880 890
pF1KB3 GENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPGPHGPNGVPGLK
:: :: : .::::: : :::::.:::::. : ::::: ::: : :: ::: : :.:: :
CCDS11 GEPGPPGPAGFAGPPGADGQPGAKGEPGDAGAKGDAGPPGPAGPAGPPGPIGNVGAPGAK
810 820 830 840 850 860
900 910 920 930 940 950
pF1KB3 GGRGTQGPPGATGFPGSAGRVGPPGPAGAPGPAGPLGEPGKEGPPGLRGDPGSHGRVGDR
:.::. ::::::::::.:::::::::.: :: :: : :::: : ::. : :: :.
CCDS11 GARGSAGPPGATGFPGAAGRVGPPGPSGNAGPPGPPGPAGKEGGKGPRGETGPAGRPGEV
870 880 890 900 910 920
960 970 980 990 1000 1010
pF1KB3 GPAGPPGGPGDKGDPGEDGQPGPDGPPGPAGTTGQRGIVGMPGQRGERGMPGLPGPAGTP
:: :::: :.::.:: :: : : ::: : .::::.::.::::::::.::::::.: :
CCDS11 GPPGPPGPAGEKGSPGADGPAGAPGTPGPQGIAGQRGVVGLPGQRGERGFPGLPGPSGEP
930 940 950 960 970 980
1020 1030 1040 1050 1060 1070
pF1KB3 GKVGPTGATGDKGPPGPVGPPGSNGPVGEPGPEGPAGNDGTPGRDGAVGERGDRGDPGPA
:: ::.::.:..:::::.:::: :: :: : :: : .:.:::::. : .::::. :::
CCDS11 GKQGPSGASGERGPPGPMGPPGLAGPPGESGREGAPGAEGSPGRDGSPGAKGDRGETGPA
990 1000 1010 1020 1030 1040
1080 1090 1100 1110 1120 1130
pF1KB3 GLPGSQGAPGTPGPVGAPGDAGQRGDPGSRGPIGPPGRAGKRGLPGPQGPRGDKGDHGDR
: ::. ::::.::::: : .:.::. : :: :: : .: :: ::::::::::. :..
CCDS11 GPPGAPGAPGAPGPVGPAGKSGDRGETGPAGPAGPVGPVGARGPAGPQGPRGDKGETGEQ
1050 1060 1070 1080 1090 1100
1140 1150 1160 1170 1180 1190
pF1KB3 GDRGQKGHRGFTGLQGLPGPPGPNGEQGSAGIPGPFGPRGPPGPVGPSGKEGNPGPLGPI
:::: ::::::.:::: ::::: :::: .: :: ::::::: .: ::.: : :::
CCDS11 GDRGIKGHRGFSGLQGPPGPPGSPGEQGPSGASGPAGPRGPPGSAGAPGKDGLNGLPGPI
1110 1120 1130 1140 1150 1160
1200 1210 1220 1230 1240 1250
pF1KB3 GPPGVRGSVGEAGPEGPPGEPGPPGPPGPPGHLTAALGDIMGHYDES-MPDPLPEFTEDQ
:::: :: .:.::: :::: ::::::::::. . .: : .:.: : ..:
CCDS11 GPPGPRGRTGDAGPVGPPGPPGPPGPPGPPS----------AGFDFSFLPQPPQEKAHDG
1170 1180 1190 1200 1210
1260 1270 1280 1290 1300
pF1KB3 AA---PDDKN---KTDPGVHATLKSLSSQIETMRSPDGSKKHPARTCDDLKLCHSAKQSG
. :: : : : .::::::.:::..:::.::.:.::::: :::.::: .::
CCDS11 GRYYRADDANVVRDRDLEVDTTLKSLSQQIENIRSPEGSRKNPARTCRDLKMCHSDWKSG
1220 1230 1240 1250 1260 1270
1310 1320 1330 1340 1350 1360
pF1KB3 EYWIDPNQGSVEDAIKVYCNMETGETCISANPSSVPRKTWWASKSP-DNKPVWYGLDMNR
::::::::: :::::.:::::::::. . :: .:.:. ::.: :.. ::.: .:.
CCDS11 EYWIDPNQGCNLDAIKVFCNMETGETCVYPTQPSVAQKNWYISKNPKDKRHVWFGESMTD
1280 1290 1300 1310 1320 1330
1370 1380 1390 1400 1410 1420
pF1KB3 GSQFAYGDHQS-PNTAITQMTFLRLLSKEASQNITYICKNSVGYMDDQAKNLKKAVVLKG
: :: :: . : : . :.:::::.: :::::::: :::::.:::.:. :::::..:.:
CCDS11 GFQFEYGGQGSDPADVAIQLTFLRLMSTEASQNITYHCKNSVAYMDQQTGNLKKALLLQG
1340 1350 1360 1370 1380 1390
1430 1440 1450 1460 1470 1480
pF1KB3 ANDLDIKAEGNIRFRYIVLQDTCSKRNGNVGKTVFEYRTQNVARLPIIDLAPVDVGGTDQ
.:...:.:::: :: : : : :....: ::::.::.: ...::::::.::.:::. ::
CCDS11 SNEIEIRAEGNSRFTYSVTVDGCTSHTGAWGKTVIEYKTTKTSRLPIIDVAPLDVGAPDQ
1400 1410 1420 1430 1440 1450
1490
pF1KB3 EFGVEIGPVCFV
::: ..:::::.
CCDS11 EFGFDVGPVCFL
1460
>>CCDS2297.1 COL3A1 gene_id:1281|Hs108|chr2 (1466 aa)
initn: 7603 init1: 4379 opt: 5603 Z-score: 2142.4 bits: 409.1 E(32554): 5.2e-113
Smith-Waterman score: 5853; 54.8% identity (69.7% similar) in 1501 aa overlap (13-1499:11-1466)
10 20 30 40 50 60
pF1KB3 MMANWAEARPLLILIVLLGQFVSIKAQEEDEDEGYGEEIACTQNGQMYLNRDIWKPAPCQ
.:..:: . : ::.: . : :.. :: : .::.::: :::
CCDS22 MMSFVQKGSWLLLALLHPTI-ILAQQEAVEGG------CSHLGQSYADRDVWKPEPCQ
10 20 30 40 50
70 80 90 100 110
pF1KB3 ICVCDNGAILCDKIECQDV-LDCADPVTPPGECCPVCSQTPGGGNTNFGRGRKGQKGEPG
:::::.:..::: : :.: ::: .: : :::: :: : :
CCDS22 ICVCDSGSVLCDDIICDDQELDCPNPEIPFGECCAVCPQPP-------------------
60 70 80 90
120 130 140 150 160 170
pF1KB3 LVPVVTGIRGRPGPAGPPGSQGPRGERGPKGRPGPRGPQGIDGEPGVPGQPGAPGPPGHP
.:. ::..::: .:::: ::: : : .:.::.:::::.:: :: :
CCDS22 -----------TAPTRPPNGQGP---QGPKGDPGPPGIPGRNGDPGIPGQPGSPGSPGPP
100 110 120 130
180 190 200 210 220 230
pF1KB3 S--HPGPDGLSRPFSAQMAGLDEKSGL--GSQVGLMPGSVGPVGPRGPQGLQGQQGGAG-
. . : : . .: :. . : :::. :. .: .:: .:: :: :: : .:. :. :
CCDS22 GICESCPTG-PQNYSPQYDSYDVKSGVAVGGLAG-YPGPAGPPGPPGPPGTSGHPGSPGS
140 150 160 170 180 190
240 250 260 270 280 290
pF1KB3 P--TGPPGEPGDPGPMGPIGSRGPEGPPGKPGEDGEPGRNGNPGEVGFAGSPGARGFPGA
: :::::::. :: :: : : :: : :.::: :: : ::: :. : :: .: :
CCDS22 PGYQGPPGEPGQAGPSGPPGPPGAIGPSGPAGKDGESGRPGRPGERGLPGPPGIKGPAGI
200 210 220 230 240 250
300 310 320 330 340 350
pF1KB3 PGLPGLKGHRGHKGLEGPKGEVGAPGSKGEAGPTGPMGAMGPLGPRGMPGERGRLGPQGA
::.::.::::: : .: :::.:::: ::: : : :: ::.:::: :::::: : ::
CCDS22 PGFPGMKGHRGFDGRNGEKGETGAPGLKGENGLPGENGAPGPMGPRGAPGERGRPGLPGA
260 270 280 290 300 310
360 370 380 390 400 410
pF1KB3 PGQRGAHGMPGKPGPMGPLGIPGSSGFPGNPGMKGEAGPTGARGPEGPQGQRGETGPPGP
: :: : :. : :: : ::..::::.:: :::.::.:. : .: ::::: :: :
CCDS22 AGARGNDGARGSDGQPGPPGPPGTAGFPGSPGAKGEVGPAGSPGSNGAPGQRGEPGPQGH
320 330 340 350 360 370
420 430 440 450 460 470
pF1KB3 VGSPGLPGAIGTDGTPGAKGPTGSPGTSGPPGSAGPPGSPGPQGSTGPQGIRGQPGDPGV
.:. : :: : .:.::.:: : : : :: : : ::: :..: :.:: :.::
CCDS22 AGAQGPPGPPGINGSPGGKGEMGPAGIPGAPGLMGARGPPGPAGANGAPGLRGGAGEPGK
380 390 400 410 420 430
480 490 500 510 520 530
pF1KB3 PGFKGEAGPKGEPGPHGIQGPIGPPGEEGKRGPRGDPGTVGPPGPVGERGAPGNRGFPGS
: ::: ::.:: : :: : : ::.:: : :.::. : :: .::::::: :: :
CCDS22 NGAKGEPGPRGERGEAGIPGVPGAKGEDGKDGSPGEPGANGLPGAAGERGAPGFRGPAGP
440 450 460 470 480 490
540 550 560 570 580 590
pF1KB3 DGLPGPKGAQGERGPVGSSGPKGSQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPLGA
.:.:: :: :::: : .::.:. :.::: : :: :: ::. :.:: : .:: :: :.
CCDS22 NGIPGEKGPAGERGAPGPAGPRGAAGEPGRDGVPGGPGMRGMPGSPGGPGSDGKPGPPGS
500 510 520 530 540 550
600 610 620 630 640 650
pF1KB3 PGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPGQRGAPGKDGEVGP
::.::::::: : ::::: ::.:::::..: ::: :: :. : :: .: :::.::.::
CCDS22 QGESGRPGPPGPSGPRGQPGVMGFPGPKGNDGAPGKNGERGGPGGPGPQGPPGKNGETGP
560 570 580 590 600 610
660 670 680 690 700 710
pF1KB3 SGPVGPPGLAGERGEQGPPGPTGFQGLPGPPGPPGEGGKPGDQGVPGDPGAVGPLGPRGE
.:: :: : .:..:. ::::: :.::::: :::::.::::. : :: :: : : .:.
CCDS22 QGPPGPTGPGGDKGDTGPPGPQGLQGLPGTGGPPGENGKPGEPGPKGDAGAPGAPGGKGD
620 630 640 650 660 670
720 730 740 750 760 770
pF1KB3 RGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPSGTPGDTGPPGLQGMPGERGIAGT
: ::::: ::..: :: .: :: ::.: ::. :: : :: .: ::::::::::: :.
CCDS22 AGAPGERGPPGLAGAPGLRGGAGPPGPEGGKGAAGPPGPPGAAGTPGLQGMPGERGGLGS
680 690 700 710 720 730
780 790 800 810 820 830
pF1KB3 PGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPGPAGPTGEKGEPGPRGLVGPPGSRGN
::::::.: : ::.:. :.:: :: ::.::::::: :.::: : :: : : ::.
CCDS22 PGPKGDKGEPGGPGADGVPGKDGPRGPTGPIGPPGPAGQPGDKGEGGAPGLPGIAGPRGS
740 750 760 770 780 790
840 850 860 870 880 890
pF1KB3 PGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPGPHGPNGV
:: :::.:: : .:: : : .:.:: ::: : ::.::..: :: : :. :: :: :
CCDS22 PGERGETGPPGPAGFPGAPGQNGEPGGKGERGAPGEKGEGGPPGVAGPPGGSGPAGPPGP
800 810 820 830 840 850
900 910 920 930 940 950
pF1KB3 PGLKGGRGTQGPPGATGFPGSAGRVGPPGPAGAPGPAGPLGEPGKEGPPGLRGDPGSHGR
:.:: ::. : :::.::::. : :::: : ::: :: : :::.:::: :. :. :
CCDS22 QGVKGERGSPGGPGAAGFPGARGLPGPPGSNGNPGPPGPSGSPGKDGPPGPAGNTGAPGS
860 870 880 890 900 910
960 970 980 990 1000 1010
pF1KB3 VGDRGPAGPPGGPGDKGDPGEDGQPGPDGPPGPAGTTGQRGIVGMPGQRGERGMPGLPGP
: :: : : ::.::.:: .: :: :: : :: :: ::..: ::. : :: :: :
CCDS22 PGVSGPKGDAGQPGEKGSPGAQGPPGAPGPLGIAGITGARGLAGPPGMPGPRGSPGPQGV
920 930 940 950 960 970
1020 1030 1040 1050 1060 1070
pF1KB3 AGTPGKVGPTGATGDKGPPGPVGPPGSNGPVGEPGPEGPAGNDGTPGRDGAVGERGDRGD
: :: : .: .:..::::: : :: : .:::: .: :.:: :::::. : .::::.
CCDS22 KGESGKPGANGLSGERGPPGPQGLPGLAGTAGEPGRDGNPGSDGLPGRDGSPGGKGDRGE
980 990 1000 1010 1020 1030
1080 1090 1100 1110 1120 1130
pF1KB3 PGPAGLPGSQGAPGTPGPVGAPGDAGQRGDPGSRGPIGPPGRAGKRGLPGPQGPRGDKGD
: : ::. : :: ::::: : .:.::. : :: : :: ::.:: :::::::::::.
CCDS22 NGSPGAPGAPGHPGPPGPVGPAGKSGDRGESGPAGPAGAPGPAGSRGAPGPQGPRGDKGE
1040 1050 1060 1070 1080 1090
1140 1150 1160 1170 1180 1190
pF1KB3 HGDRGDRGQKGHRGFTGLQGLPGPPGPNGEQGSAGIPGPFGPRGPPGPVGPSGKEGNPGP
:.:: : :::::: : : :: ::: :.::. : ::: ::::: :: :: ::.:. :
CCDS22 TGERGAAGIKGHRGFPGNPGAPGSPGPAGQQGAIGSPGPAGPRGPVGPSGPPGKDGTSGH
1100 1110 1120 1130 1140 1150
1200 1210 1220 1230 1240
pF1KB3 LGPIGPPGVRGSVGEAGPEGPPGEPGPPGPPGPPGHLTAALGD-----IMGHYDESMPDP
::::::: ::. :: : :: ::.:: :::::::: : : : :.
CCDS22 PGPIGPPGPRGNRGERGSEGSPGHPGQPGPPGPPGAPGPCCGGVGAAAIAGIGGEKAGGF
1160 1170 1180 1190 1200 1210
1250 1260 1270 1280 1290 1300
pF1KB3 LPEFTEDQAAPDDKNKTDPGVHATLKSLSSQIETMRSPDGSKKHPARTCDDLKLCHSAKQ
: . .. : : .:: . ..:::...:::.. :::::.:.:::.: :::.:: .
CCDS22 APYYGDEPM--DFKINTDE-IMTSLKSVNGQIESLISPDGSRKNPARNCRDLKFCHPELK
1220 1230 1240 1250 1260 1270
1310 1320 1330 1340 1350 1360
pF1KB3 SGEYWIDPNQGSVEDAIKVYCNMETGETCISANPSSVPRKTWWASKSPDNKPVWYGLDMN
:::::.::::: :::::.:::::::::::::: .:::: ::...: ..: ::.: .:.
CCDS22 SGEYWVDPNQGCKLDAIKVFCNMETGETCISANPLNVPRKHWWTDSSAEKKHVWFGESMD
1280 1290 1300 1310 1320 1330
1370 1380 1390 1400 1410 1420
pF1KB3 RGSQFAYGDHQSPNTAI-TQMTFLRLLSKEASQNITYICKNSVGYMDDQAKNLKKAVVLK
: ::.::. . :. .. ....::::::..::::::: ::::..:::. . :.:::. :
CCDS22 GGFQFSYGNPELPEDVLDVHLAFLRLLSSRASQNITYHCKNSIAYMDQASGNVKKALKLM
1340 1350 1360 1370 1380 1390
1430 1440 1450 1460 1470 1480
pF1KB3 GANDLDIKAEGNIRFRYIVLQDTCSKRNGNVGKTVFEYRTQNVARLPIIDLAPVDVGGTD
:.:. ..::::: .: : ::.: :.:..:. .::::::::....::::.:.:: :.:: :
CCDS22 GSNEGEFKAEGNSKFTYTVLEDGCTKHTGEWSKTVFEYRTRKAVRLPIVDIAPYDIGGPD
1400 1410 1420 1430 1440 1450
1490
pF1KB3 QEFGVEIGPVCFV
:::::..:::::.
CCDS22 QEFGVDVGPVCFL
1460
>>CCDS34682.1 COL1A2 gene_id:1278|Hs108|chr7 (1366 aa)
initn: 4443 init1: 4443 opt: 4613 Z-score: 1768.2 bits: 339.7 E(32554): 3.6e-92
Smith-Waterman score: 5544; 57.0% identity (70.7% similar) in 1363 aa overlap (140-1498:32-1365)
110 120 130 140 150 160
pF1KB3 GRKGQKGEPGLVPVVTGIRGRPGPAGPPGSQGPRGERGPKGRPGPRGPQGIDGEPGVPGQ
.:: :.:::.:. :: :: : ::: : :
CCDS34 LSFVDTRTLLLLAVTLCLATCQSLQEETVRKGPAGDRGPRGERGPPGPPGRDGEDGPTGP
10 20 30 40 50 60
170 180 190 200 210 220
pF1KB3 PGAPGPPGHPSHPGPDGLSRPFSAQMAGLDEKSGLGSQVGLMPGSVGPVGPRGPQGLQGQ
:: ::: ::: ::. :.::. : .: ::: :: .: .::::: : :
CCDS34 PGPPGP------PGPPGLGGNFAAQYDG----KG----VGLGPGPMGLMGPRGPPGAAGA
70 80 90 100
230 240 250 260 270 280
pF1KB3 QGGAGPTGPPGEPGDPGPMGPIGSRGPEGPPGKPGEDGEPGRNGNPGEVGFAGSPGARGF
: : :: ::::.:: :: :.::: ::::: ::::.::. : ::: : .: :::::
CCDS34 PGPQGFQGPAGEPGEPGQTGPAGARGPAGPPGKAGEDGHPGKPGRPGERGVVGPQGARGF
110 120 130 140 150 160
290 300 310 320 330 340
pF1KB3 PGAPGLPGLKGHRGHKGLEGPKGEVGAPGSKGEAGPTGPMGAMGPLGPRGMPGERGRLGP
::.:::::.:: :::.::.: ::. :::: ::: : : :. : : ::.::::::.:
CCDS34 PGTPGLPGFKGIRGHNGLDGLKGQPGAPGVKGEPGAPGENGTPGQTGARGLPGERGRVGA
170 180 190 200 210 220
350 360 370 380 390 400
pF1KB3 QGAPGQRGAHGMPGKPGPMGPLGIPGSSGFPGNPGMKGEAGPTGARGPEGPQGQRGETGP
: : ::. : : :: ::.: : :::: :: ::: : .: :: :: : :::.:
CCDS34 PGPAGARGSDGSVGPVGPAGPIGSAGPPGFPGAPGPKGEIGAVGNAGPAGPAGPRGEVGL
230 240 250 260 270 280
410 420 430 440 450 460
pF1KB3 PG---PVGSPGLPGAIGTDGTPGAKGPTGSPGTSGPPGSAGPPGSPGPQGSTGPQGIRGQ
:: ::: :: ::: .: :::: .: ::..: :: :: : ::: :..: : ::
CCDS34 PGLSGPVGPPGNPGA---NGLTGAKGAAGLPGVAGAPGLPGPRGIPGPVGAAGATGARGL
290 300 310 320 330 340
470 480 490 500 510 520
pF1KB3 PGDPGVPGFKGEAGPKGEPGPHGIQGPIGPPGEEGKRGPRGDPGTVGPPGPVGERGAPGN
:.:: : :::.: ::::: : ::: :: :::::::: :. :..::::: : ::.::.
CCDS34 VGEPGPAGSKGESGNKGEPGSAGPQGPPGPSGEEGKRGPNGEAGSAGPPGPPGLRGSPGS
350 360 370 380 390 400
530 540 550 560 570 580
pF1KB3 RGFPGSDGLPGPKGAQGERGPVGSSGPKGSQGDPGRPGEPGLPGARGLTGNPGVQGPEGK
::.::.:: : : : :: : .: .: .:: :::::::: : ::: :.:: :: ::
CCDS34 RGLPGADGRAGVMGPPGSRGASGPAGVRGPNGDAGRPGEPGLMGPRGLPGSPGNIGPAGK
410 420 430 440 450 460
590 600 610 620 630 640
pF1KB3 LGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPGQRGAPGK
::.: :: :::::: : : ::.::..:.::::: .::::: :. :.::. : :::::
CCDS34 EGPVGLPGIDGRPGPIGPAGARGEPGNIGFPGPKGPTGDPGKNGDKGHAGLAGARGAPGP
470 480 490 500 510 520
650 660 670 680 690 700
pF1KB3 DGEVGPSGPVGPPGLAGERGEQGPPGPTGFQGLPGPPGPPGEGGKPGDQGVPGDPGAVGP
::. : .:: :: :. : .:::::::: :::::::: :: :: ::::..:. :. : ::
CCDS34 DGNNGAQGPPGPQGVQGGKGEQGPPGPPGFQGLPGPSGPAGEVGKPGERGLHGEFGLPGP
530 540 550 560 570 580
710 720 730 740 750 760
pF1KB3 LGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPSGTPGDTGPPGLQGMPGE
::::::: ::: : : :: : .: .: :::: :: :: :. : .:: : .:.:::
CCDS34 AGPRGERGPPGESGAAGPTGPIGSRGPSGPPGPDGNKGEPGVVGAVGTAGPSGPSGLPGE
590 600 610 620 630 640
770 780 790 800 810 820
pF1KB3 RGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPGPAGPTGEKGEPGPRGLVGP
:: :: :: ::..: : .: :. : ::::: :: .: ::::: ::..:: : : .::
CCDS34 RGAAGIPGGKGEKGEPGLRGEIGNPGRDGARGAPGAVGAPGPAGATGDRGEAGAAGPAGP
650 660 670 680 690 700
830 840 850 860 870 880
pF1KB3 PGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPGP
: ::.:: ::: ::.: ::::: : ::::.::: : : ::. : :: : .:. ::
CCDS34 AGPRGSPGERGEVGPAGPNGFAGPAGAAGQPGAKGERGAKGPKGENGVVGPTGPVGAAGP
710 720 730 740 750 760
890 900 910 920 930 940
pF1KB3 HGPNGVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPAGAPGPAGPLGEPGKEGPPGLRGD
:::: :: :.:: :::: :::::.:::.:::::.: :: :: : :::: : :::
CCDS34 AGPNGPPGPAGSRGDGGPPGMTGFPGAAGRTGPPGPSGISGPPGPPGPAGKEGLRGPRGD
770 780 790 800 810 820
950 960 970 980 990 1000
pF1KB3 PGSHGRVGDRGPAGPPGGPGDKGDPGEDGQPGPDGPPGPAGTTGQRGIVGMPGQRGERGM
: ::.:. : .:::: :.:: :: : :: : ::: : : ::.:.::.:::::.
CCDS34 QGPVGRTGEVGAVGPPGFAGEKGPSGEAGTAGPPGTPGPQGLLGAPGILGLPGSRGERGL
830 840 850 860 870 880
1010 1020 1030 1040 1050 1060
pF1KB3 PGLPGPAGTPGKVGPTGATGDKGPPGPVGPPGSNGPVGEPGPEGPAGNDGTPGRDGAVGE
::. : .: :: .: .: : .:::: :: :: :: :: : .: :::: ::::: :.
CCDS34 PGVAGAVGEPGPLGIAGPPGARGPPGAVGSPGVNGAPGEAGRDGNPGNDGPPGRDGQPGH
890 900 910 920 930 940
1070 1080 1090 1100 1110 1120
pF1KB3 RGDRGDPGPAGLPGSQGAPGTPGPVGAPGDAGQRGDPGSRGPIGPPGRAGKRGLPGPQGP
.:.:: :: : :. :::: :::: : :.::. : ::.:: : .: :: ::::
CCDS34 KGERGYPGNIGPVGAAGAPGPHGPVGPAGKHGNRGETGPSGPVGPAGAVGPRGPSGPQGI
950 960 970 980 990 1000
1130 1140 1150 1160 1170 1180
pF1KB3 RGDKGDHGDRGDRGQKGHRGFTGLQGLPGPPGPNGEQGSAGIPGPFGPRGPPGPVGPSGK
:::::. :..: :: : .: .::::::: : .:.::. : :: ::::: :: ::.::
CCDS34 RGDKGEPGEKGPRGLPGLKGHNGLQGLPGIAGHHGDQGAPGSVGPAGPRGPAGPSGPAGK
1010 1020 1030 1040 1050 1060
1190 1200 1210 1220 1230 1240
pF1KB3 EGNPGPLGPIGPPGVRGSVGEAGPEGPPGEPGPPGPPGPPGHLTAALGDIMGHYDESMPD
.: : : .:: :.:: :. :: :::: :::::::: : : :: ..
CCDS34 DGRTGHPGTVGPAGIRGPQGHQGPAGPPGPPGPPGPPGVSG----------GGYDFGYDG
1070 1080 1090 1100 1110
1250 1260 1270 1280 1290 1300
pF1KB3 PLPEFTEDQAAPDDKNKTDPGVHATLKSLSSQIETMRSPDGSKKHPARTCDDLKLCHSAK
. . . ..::. . : : : ::::::..::::. .:.::.:.::::: ::.: :
CCDS34 DFYRADQPRSAPSLRPK-DYEVDATLKSLNNQIETLLTPEGSRKNPARTCRDLRLSHPEW
1120 1130 1140 1150 1160 1170
1310 1320 1330 1340 1350 1360
pF1KB3 QSGEYWIDPNQGSVEDAIKVYCNMETGETCISANPSSVPRKTWWASKSPDNKPVWYGLDM
.:: :::::::: . :::::::.. :::::: :.: ..: :.:. : : :.: :: : .
CCDS34 SSGYYWIDPNQGCTMDAIKVYCDFSTGETCIRAQPENIPAKNWYRS-SKDKKHVWLGETI
1180 1190 1200 1210 1220 1230
1370 1380 1390 1400 1410 1420
pF1KB3 NRGSQFAYG-DHQSPNTAITQMTFLRLLSKEASQNITYICKNSVGYMDDQAKNLKKAVVL
: :::: :. . . . ::..:.:::.. ::::::: ::::..:::... ::::::.:
CCDS34 NAGSQFEYNVEGVTSKEMATQLAFMRLLANYASQNITYHCKNSIAYMDEETGNLKKAVIL
1240 1250 1260 1270 1280 1290
1430 1440 1450 1460 1470 1480
pF1KB3 KGANDLDIKAEGNIRFRYIVLQDTCSKRNGNVGKTVFEYRTQNVARLPIIDLAPVDVGGT
.:.::... :::: :: : :: : :::.... :::..::.:.. .:::..:.::.:.::.
CCDS34 QGSNDVELVAEGNSRFTYTVLVDGCSKKTNEWGKTIIEYKTNKPSRLPFLDIAPLDIGGA
1300 1310 1320 1330 1340 1350
1490
pF1KB3 DQEFGVEIGPVCFV
:::: :.::::::
CCDS34 DQEFFVDIGPVCFK
1360
>>CCDS75932.1 COL5A1 gene_id:1289|Hs108|chr9 (1838 aa)
initn: 3573 init1: 3573 opt: 4381 Z-score: 1679.2 bits: 323.7 E(32554): 3.3e-87
Smith-Waterman score: 4384; 46.2% identity (62.3% similar) in 1456 aa overlap (84-1499:422-1837)
60 70 80 90 100
pF1KB3 WKPAPCQICVCDNGAILCDKIECQDVLDCADPVTPPGECCPVCSQTPGGGNTNF-G----
::.. :.: : :.. .: . :
CCDS75 PPGEGADDLEGEFTEETIRNLDENYYDPYYDPTSSPSEIGP---GMPANQDTIYEGIGGP
400 410 420 430 440
110 120 130 140 150 160
pF1KB3 RGRKGQKGEPGLVPVVTGIRGRPGPAGPPGSQGPRGERGPKGRPGPRGPQGIDGEPGVPG
::.:::::::... :.: ::: :: : :: : :: :. : : .: :.::.::
CCDS75 RGEKGQKGEPAIIEPGMLIEGPPGPEGPAGLPGPPGTMGPTGQVGDPGERGPPGRPGLPG
450 460 470 480 490 500
170 180 190 200 210 220
pF1KB3 QPGAPGPPGH----PSHPGPDGLSRPFSAQMAGLDEKSGLGSQVGLMPGSVGPVGPRGPQ
: ::::: : . : : . .. :.. .:.. .:. :. . .. :: ::.
CCDS75 ADGLPGPPGTMLMLPFRFGGGG-DAGSKGPMVSAQESQ---AQAILQQARLALRGPAGPM
510 520 530 540 550 560
230 240 250 260 270 280
pF1KB3 GLQGQQGGAGPTGP---PGEPGDPGPMGPIGSRGPEGPPGKPGEDGEPGRNGNPGEVGFA
:: :. : .:: : ::::: ::.:: : .:: :: ::::. :. : .: : : .
CCDS75 GLTGRPGPVGPPGSGGLKGEPGDVGPQGPRGVQGPPGPAGKPGRRGRAGSDGARGMPGQT
570 580 590 600 610 620
290 300 310 320 330 340
pF1KB3 GSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEVGAPGSKGEAGPTGPMGAMGPLGPRGMP
: : ::: : :::: ::::: : :: : : : .:. : .:: : : ::::.
CCDS75 GPKGDRGFDGLAGLPGEKGHRGDPGPSGPPGPPGDDGERGDDGEVGPRGLPGEPGPRGLL
630 640 650 660 670 680
350 360 370 380 390 400
pF1KB3 GERGRLGPQGAPGQRGAHGMPGKPGPMGPLGIPGSSGFPGNPGMKGEAGPTGARGPEGPQ
: .: :: : :: : :.:: : .:: : :: : :::: .: :: :: :: :
CCDS75 GPKGPPGPPGPPGVTGMDGQPGPKGNVGPQGEPGPPGQQGNPGAQGLPGPQGAIGP--P-
690 700 710 720 730 740
410 420 430 440 450 460
pF1KB3 GQRGETGPPGPVGSPGLPGAIGTDGTPGAKGPTGSPGTSGPPGSAGPPGSPGPQGSTGPQ
:: :: : : ::.::: : : :: .:: : : .:::: :: : :::.: : .
CCDS75 ---GEKGPLGKPGLPGMPGADGPPGHPGKEGPPGEKGGQGPPGPQGPIGYPGPRGVKGAD
750 760 770 780 790
470 480 490 500 510
pF1KB3 GIRG------QPGDPGVPGFKGEAGPKG---EPGPHGIQGPIGPPGEEGKRGPRGDPGTV
:::: . :. : :::::. : :: : :: : .: :: : .:. :: :::: .
CCDS75 GIRGLKGTKGEKGEDGFPGFKGDMGIKGDRGEIGPPGPRGEDGPEGPKGRGGPNGDPGPL
800 810 820 830 840 850
520 530 540 550 560 570
pF1KB3 GPPGPVGERGAPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGSQGDPGRPGEPGLPGAR
:::: :. :.:: :.:: . ::::. : : :..: ::..: ::.:: : :
CCDS75 GPPGEKGKLGVPGLPGYPGRQ---GPKGSIGFPGFPGANGEKGGRGTPGKPGPRGQRGPT
860 870 880 890 900 910
580 590 600 610 620 630
pF1KB3 GLTGNPGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEA
: :. : .: :: :: : : :: :::: : : : :.::::: : ::: :
CCDS75 GPRGERGPRGITGKPGPKGNSGGDGPAGPPGERGPNGPQGPTGFPGPKGPPGPPGKDGLP
920 930 940 950 960 970
640 650 660 670 680 690
pF1KB3 GNAGVPGQRGAPGKDGEVGPSGPVGPPGLAGERGEQGPPGPTGFQGLPGPPGPPGEGGKP
:. ::::: : .:..:: : ::::..: .: : :: : .: ::::::::: : :
CCDS75 GH---PGQRGETGFQGKTGP--P-GPPGVVGPQGPTGETGPMGERGHPGPPGPPGEQGLP
980 990 1000 1010 1020
700 710 720 730 740 750
pF1KB3 GDQGVPGDPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPSGTP
: : : : :: : :. : :: :: :: :::: : : .: .:: : :::.:.:
CCDS75 GLAGKEGTKGDPGPAGLPGKDGPPGLRGFPGDRGLPGPVGALGLKGNEGPPGPPGPAGSP
1030 1040 1050 1060 1070 1080
760 770 780 790 800
pF1KB3 GDTGPPGLQG---MPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPGPA
:. :: : : .::. : : ::: :..:. :::: .: :: :: : ::.: ::::
CCDS75 GERGPAGAAGPIGIPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDG---LQGPVGLPGPA
1090 1100 1110 1120 1130 1140
810 820 830 840 850 860
pF1KB3 GPTGEKGEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQK
::.: :: : .: .: ::..:. :..::.:: : .: :::: :::: .: :::: .
CCDS75 GPVGPPGEDGDKGEIGEPGQKGSKGDKGEQGPPGPTG---PQGPIGQPGPSGADGEPGPR
1150 1160 1170 1180 1190 1200
870 880 890 900 910 920
pF1KB3 GDAGSPGPQGLAGSPGPHGPNGVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPAGAPGPA
:. : : .: . ::.: : :: : .: :::: : :..:..::::: : ::.
CCDS75 GQQGLFGQKG---DEGPRGFPGPPGPVGLQGLPGPPGEKGETGDVGQMGPPGPPGPRGPS
1210 1220 1230 1240 1250 1260
930 940 950 960 970 980
pF1KB3 GPLGEPGKEGPPGLRGDPGSHGRVGDRGPAGPPGGPGDKGDPGEDGQPGPDGPPGPAGTT
: : : .:::: :.::. :. :. : :: :: ::. : :: :. : : ::.:..
CCDS75 GAPGADGPQGPPGGIGNPGAVGEKGEPGEAGEPGLPGEGGPPGPKGERGEKGESGPSGAA
1270 1280 1290 1300 1310 1320
990 1000 1010 1020 1030 1040
pF1KB3 GQRGIVGMPGQRGERG------MPGLPGPAGTPGKVGPTGATGDKGPPGPVGPPGSNGPV
: : : ::. : .: .:: ::: : :: .: : :::: : : :: ::.
CCDS75 GPPGPKGPPGDDGPKGSPGPVGFPGDPGPPGEPGPAGQDGPPGDKGDDGEPGQTGSPGPT
1330 1340 1350 1360 1370 1380
1050 1060 1070 1080 1090 1100
pF1KB3 GEPGPEGPAGNDGTPGRDGAVGERGDRGDPGPAGLPGSQGAPGTPGPVGAPGDAGQRGDP
::::: :: :. : :: : :..:..: : ::: : : : :: :::: : :
CCDS75 GEPGPSGPPGKRGPPGPAGPEGRQGEKGAKGEAGLEGPPGKTGPIGPQGAPGKPGPDGLR
1390 1400 1410 1420 1430 1440
1110 1120 1130 1140 1150 1160
pF1KB3 GSRGPIGPPGRAGKRGLPGPQGPRGDKGDHGDRGDRGQKGHRGFTGLQGLPGPPGPNGEQ
: ::.: : :. : :: :: : : : .:: : ::..: :: :: :::: .::.
CCDS75 GIPGPVGEQGLPGSPGPDGPPGPMGPPGLPGLKGDSGPKGEKGHPGLIGLIGPPGEQGEK
1450 1460 1470 1480 1490 1500
1170 1180 1190 1200 1210
pF1KB3 GSAGIPGP---FGPRGPPGPVGPSGKEGNPGPLGPIGPPGVRGSVGEAGPEGPPGE---P
:. :.::: ::.: : .:::: : ::: : :::: .:. : .:: :: :: :
CCDS75 GDRGLPGPQGSSGPKGEQGITGPSGPIGPPGPPGLPGPPGPKGAKGSSGPTGPKGEAGHP
1510 1520 1530 1540 1550 1560
1220 1230 1240 1250 1260 1270
pF1KB3 GPPGPPGPPGHLTAALGDIMGHYDESMPDPLPEFTEDQAAPDDKNKTD--PGVHATLKSL
::::::::::.. : :.. . : .. .: . . . .: . ..:.::
CCDS75 GPPGPPGPPGEVIQPL-PIQASRTRRNIDA-SQLLDDGNGENYVDYADGMEEIFGSLNSL
1570 1580 1590 1600 1610
1280 1290 1300 1310 1320 1330
pF1KB3 SSQIETMRSPDGSKKHPARTCDDLKLCHSAKQSGEYWIDPNQGSVEDAIKVYCNMETG-E
. .:: :. : :....::::: ::.::: .::::.::::: .:..:::::. .:
CCDS75 KLEIEQMKRPLGTQQNPARTCKDLQLCHPDFPDGEYWVDPNQGCSRDSFKVYCNFTAGGS
1620 1630 1640 1650 1660 1670
1340 1350 1360 1370 1380 1390
pF1KB3 TCISANPSSVPRK-TWWASKSPDNKPVWYGLDMNRGSQFAYGDHQSPNTAITQMTFLRLL
::. . .: : . : ...:.. ::. ...::: ..: : .. ....::::::::
CCDS75 TCVFPDKKSEGSKMARWPKEQPST---WYS-QYKRGSLLSYVDAEGNPVGVVQMTFLRLL
1680 1690 1700 1710 1720 1730
1400 1410 1420 1430 1440 1450
pF1KB3 SKEASQNITYICKNSVGYMDDQAKNLKKAVVLKGANDLDIKAEGNIRFRYIVLQDTCSKR
: : ::.:: : .::...: . . ::. . :.:: ... ..: .: .: : :. .
CCDS75 SASAHQNVTYHCYQSVAWQDAATGSYDKALRFLGSNDEEMSYDNNPYIRALV--DGCATK
1740 1750 1760 1770 1780 1790
1460 1470 1480 1490
pF1KB3 NGNVGKTVFEYRTQNVARLPIIDLAPVDVGGTDQEFGVEIGPVCFV
.: :::.: : .: ..::.:. : : ..:.:: :.::.::.
CCDS75 KG-YQKTVLEIDTPKVEQVPIVDIMFNDFGEASQKFGFEVGPACFMG
1800 1810 1820 1830
>>CCDS6982.1 COL5A1 gene_id:1289|Hs108|chr9 (1838 aa)
initn: 3573 init1: 3573 opt: 4379 Z-score: 1678.4 bits: 323.5 E(32554): 3.6e-87
Smith-Waterman score: 4382; 46.2% identity (62.2% similar) in 1456 aa overlap (84-1499:422-1837)
60 70 80 90 100
pF1KB3 WKPAPCQICVCDNGAILCDKIECQDVLDCADPVTPPGECCPVCSQTPGGGNTNF-G----
::.. :.: : :.. .: . :
CCDS69 PPGEGADDLEGEFTEETIRNLDENYYDPYYDPTSSPSEIGP---GMPANQDTIYEGIGGP
400 410 420 430 440
110 120 130 140 150 160
pF1KB3 RGRKGQKGEPGLVPVVTGIRGRPGPAGPPGSQGPRGERGPKGRPGPRGPQGIDGEPGVPG
::.:::::::... :.: ::: :: : :: : :: :. : : .: :.::.::
CCDS69 RGEKGQKGEPAIIEPGMLIEGPPGPEGPAGLPGPPGTMGPTGQVGDPGERGPPGRPGLPG
450 460 470 480 490 500
170 180 190 200 210 220
pF1KB3 QPGAPGPPGH----PSHPGPDGLSRPFSAQMAGLDEKSGLGSQVGLMPGSVGPVGPRGPQ
: ::::: : . : : . .. :.. .:.. .:. :. . .. :: ::.
CCDS69 ADGLPGPPGTMLMLPFRFGGGG-DAGSKGPMVSAQESQ---AQAILQQARLALRGPAGPM
510 520 530 540 550 560
230 240 250 260 270 280
pF1KB3 GLQGQQGGAGPTGP---PGEPGDPGPMGPIGSRGPEGPPGKPGEDGEPGRNGNPGEVGFA
:: :. : .:: : ::::: ::.:: : .:: :: ::::. :. : .: : : .
CCDS69 GLTGRPGPVGPPGSGGLKGEPGDVGPQGPRGVQGPPGPAGKPGRRGRAGSDGARGMPGQT
570 580 590 600 610 620
290 300 310 320 330 340
pF1KB3 GSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEVGAPGSKGEAGPTGPMGAMGPLGPRGMP
: : ::: : :::: ::::: : :: : : : .:. : .:: : : ::::.
CCDS69 GPKGDRGFDGLAGLPGEKGHRGDPGPSGPPGPPGDDGERGDDGEVGPRGLPGEPGPRGLL
630 640 650 660 670 680
350 360 370 380 390 400
pF1KB3 GERGRLGPQGAPGQRGAHGMPGKPGPMGPLGIPGSSGFPGNPGMKGEAGPTGARGPEGPQ
: .: :: : :: : :.:: : .:: : :: : :::: .: :: :: :: :
CCDS69 GPKGPPGPPGPPGVTGMDGQPGPKGNVGPQGEPGPPGQQGNPGAQGLPGPQGAIGP--P-
690 700 710 720 730 740
410 420 430 440 450 460
pF1KB3 GQRGETGPPGPVGSPGLPGAIGTDGTPGAKGPTGSPGTSGPPGSAGPPGSPGPQGSTGPQ
:: :: : : ::.::: : : :: .:: : : .:::: :: : :::.: : .
CCDS69 ---GEKGPLGKPGLPGMPGADGPPGHPGKEGPPGEKGGQGPPGPQGPIGYPGPRGVKGAD
750 760 770 780 790
470 480 490 500 510
pF1KB3 GIRG------QPGDPGVPGFKGEAGPKG---EPGPHGIQGPIGPPGEEGKRGPRGDPGTV
:::: . :. : :::::. : :: : :: : .: :: : .:. :: :::: .
CCDS69 GIRGLKGTKGEKGEDGFPGFKGDMGIKGDRGEIGPPGPRGEDGPEGPKGRGGPNGDPGPL
800 810 820 830 840 850
520 530 540 550 560 570
pF1KB3 GPPGPVGERGAPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGSQGDPGRPGEPGLPGAR
:::: :. :.:: :.:: . ::::. : : :..: ::..: ::.:: : :
CCDS69 GPPGEKGKLGVPGLPGYPGRQ---GPKGSIGFPGFPGANGEKGGRGTPGKPGPRGQRGPT
860 870 880 890 900 910
580 590 600 610 620 630
pF1KB3 GLTGNPGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEA
: :. : .: :: :: : : :: :::: : : : :.::::: : ::: :
CCDS69 GPRGERGPRGITGKPGPKGNSGGDGPAGPPGERGPNGPQGPTGFPGPKGPPGPPGKDGLP
920 930 940 950 960 970
640 650 660 670 680 690
pF1KB3 GNAGVPGQRGAPGKDGEVGPSGPVGPPGLAGERGEQGPPGPTGFQGLPGPPGPPGEGGKP
:. ::::: : .:..:: : ::::..: .: : :: : .: ::::::::: : :
CCDS69 GH---PGQRGETGFQGKTGP--P-GPPGVVGPQGPTGETGPMGERGHPGPPGPPGEQGLP
980 990 1000 1010 1020
700 710 720 730 740 750
pF1KB3 GDQGVPGDPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPSGTP
: : : : :: : :. : :: :: :: :::: : : .: .:: : :::.:.:
CCDS69 GLAGKEGTKGDPGPAGLPGKDGPPGLRGFPGDRGLPGPVGALGLKGNEGPPGPPGPAGSP
1030 1040 1050 1060 1070 1080
760 770 780 790 800
pF1KB3 GDTGPPGLQG---MPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPGPA
:. :: : : .::. : : ::: :..:. :::: .: :: :: : ::.: ::::
CCDS69 GERGPAGAAGPIGIPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDG---LQGPVGLPGPA
1090 1100 1110 1120 1130 1140
810 820 830 840 850 860
pF1KB3 GPTGEKGEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQK
::.: :: : .: .: ::..:. :..::.:: : .: :::: :::: .: :::: .
CCDS69 GPVGPPGEDGDKGEIGEPGQKGSKGDKGEQGPPGPTG---PQGPIGQPGPSGADGEPGPR
1150 1160 1170 1180 1190 1200
870 880 890 900 910 920
pF1KB3 GDAGSPGPQGLAGSPGPHGPNGVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPAGAPGPA
:. : : .: . ::.: : :: : .: :::: : :..:..::::: : ::.
CCDS69 GQQGLFGQKG---DEGPRGFPGPPGPVGLQGLPGPPGEKGETGDVGQMGPPGPPGPRGPS
1210 1220 1230 1240 1250 1260
930 940 950 960 970 980
pF1KB3 GPLGEPGKEGPPGLRGDPGSHGRVGDRGPAGPPGGPGDKGDPGEDGQPGPDGPPGPAGTT
: : : .:::: :.::. :. :. : :: :: ::. : :: :. : : ::.:..
CCDS69 GAPGADGPQGPPGGIGNPGAVGEKGEPGEAGEPGLPGEGGPPGPKGERGEKGESGPSGAA
1270 1280 1290 1300 1310 1320
990 1000 1010 1020 1030 1040
pF1KB3 GQRGIVGMPGQRGERG------MPGLPGPAGTPGKVGPTGATGDKGPPGPVGPPGSNGPV
: : : ::. : .: .:: ::: : :: .: : :::: : : :: ::.
CCDS69 GPPGPKGPPGDDGPKGSPGPVGFPGDPGPPGEPGPAGQDGPPGDKGDDGEPGQTGSPGPT
1330 1340 1350 1360 1370 1380
1050 1060 1070 1080 1090 1100
pF1KB3 GEPGPEGPAGNDGTPGRDGAVGERGDRGDPGPAGLPGSQGAPGTPGPVGAPGDAGQRGDP
::::: :: :. : :: : :..:..: : ::: : : : :: :::: : :
CCDS69 GEPGPSGPPGKRGPPGPAGPEGRQGEKGAKGEAGLEGPPGKTGPIGPQGAPGKPGPDGLR
1390 1400 1410 1420 1430 1440
1110 1120 1130 1140 1150 1160
pF1KB3 GSRGPIGPPGRAGKRGLPGPQGPRGDKGDHGDRGDRGQKGHRGFTGLQGLPGPPGPNGEQ
: ::.: : :. : :: :: : : : .:: : ::..: :: :: :::: .::.
CCDS69 GIPGPVGEQGLPGSPGPDGPPGPMGPPGLPGLKGDSGPKGEKGHPGLIGLIGPPGEQGEK
1450 1460 1470 1480 1490 1500
1170 1180 1190 1200 1210
pF1KB3 GSAGIPGP---FGPRGPPGPVGPSGKEGNPGPLGPIGPPGVRGSVGEAGPEGPPGE---P
:. :.::: ::.: : .:::: : ::: : :::: .:. : .:: :: :: :
CCDS69 GDRGLPGPQGSSGPKGEQGITGPSGPIGPPGPPGLPGPPGPKGAKGSSGPTGPKGEAGHP
1510 1520 1530 1540 1550 1560
1220 1230 1240 1250 1260 1270
pF1KB3 GPPGPPGPPGHLTAALGDIMGHYDESMPDPLPEFTEDQAAPDDKNKTD--PGVHATLKSL
::::::::::.. : :.. . : .. .: . . . .: . ..:.::
CCDS69 GPPGPPGPPGEVIQPL-PIQASRTRRNIDA-SQLLDDGNGENYVDYADGMEEIFGSLNSL
1570 1580 1590 1600 1610
1280 1290 1300 1310 1320 1330
pF1KB3 SSQIETMRSPDGSKKHPARTCDDLKLCHSAKQSGEYWIDPNQGSVEDAIKVYCNMETG-E
. .:: :. : :....::::: ::.::: .::::.::::: .:..:::::. .:
CCDS69 KLEIEQMKRPLGTQQNPARTCKDLQLCHPDFPDGEYWVDPNQGCSRDSFKVYCNFTAGGS
1620 1630 1640 1650 1660 1670
1340 1350 1360 1370 1380 1390
pF1KB3 TCISANPSSV-PRKTWWASKSPDNKPVWYGLDMNRGSQFAYGDHQSPNTAITQMTFLRLL
::. . .: : : : ...: . :.. ...::. ..: : .. ....::::::::
CCDS69 TCVFPDKKSEGARITSWPKENPGS---WFS-EFKRGKLLSYVDAEGNPVGVVQMTFLRLL
1680 1690 1700 1710 1720 1730
1400 1410 1420 1430 1440 1450
pF1KB3 SKEASQNITYICKNSVGYMDDQAKNLKKAVVLKGANDLDIKAEGNIRFRYIVLQDTCSKR
: : ::.:: : .::...: . . ::. . :.:: ... ..: .: .: : :. .
CCDS69 SASAHQNVTYHCYQSVAWQDAATGSYDKALRFLGSNDEEMSYDNNPYIRALV--DGCATK
1740 1750 1760 1770 1780 1790
1460 1470 1480 1490
pF1KB3 NGNVGKTVFEYRTQNVARLPIIDLAPVDVGGTDQEFGVEIGPVCFV
.: :::.: : .: ..::.:. : : ..:.:: :.::.::.
CCDS69 KG-YQKTVLEIDTPKVEQVPIVDIMFNDFGEASQKFGFEVGPACFMG
1800 1810 1820 1830
>>CCDS53348.1 COL11A1 gene_id:1301|Hs108|chr1 (1767 aa)
initn: 6719 init1: 3431 opt: 4366 Z-score: 1673.7 bits: 322.6 E(32554): 6.6e-87
Smith-Waterman score: 4378; 46.1% identity (62.1% similar) in 1457 aa overlap (85-1499:354-1766)
60 70 80 90 100
pF1KB3 KPAPCQICVCDNGAILCDKIECQDVLDCADPVTPP----GECCPVCSQ-TPGGGNTNFGR
:..:: : :. .. : . : . .
CCDS53 KEIDGRDSDLLVDGDLGEYDFYEYKEYEDKPTSPPNEEFGPGVPAETDITETSINGHGAY
330 340 350 360 370 380
110 120 130 140 150 160
pF1KB3 GRKGQKGEPGLVPVVTGIRGRPGPAGPPGSQGPRGERGPKGRPGPRGPQGIDGEPGVPGQ
:.:::::::..: ..: :::::: : .:: : .:: : :: : .: :.::.::
CCDS53 GEKGQKGEPAVVEPGMLVEGPPGPAGPAGIMGPPGLQGPTGPPGDPGDRGPPGRPGLPGA
390 400 410 420 430 440
170 180 190 200 210 220
pF1KB3 PGAPGPPGH----PSHPGPDGLSRP-FSAQMAGLDEKSGLGSQVGLMPGSVGPVGPRGPQ
: ::::: : . : :: . : .::: : .:. :. . .. :: ::.
CCDS53 DGLPGPPGTMLMLPFRYGGDGSKGPTISAQEAQ--------AQAILQQARIALRGPPGPM
450 460 470 480 490
230 240 250 260 270 280
pF1KB3 GLQGQQG---GAGPTGPPGEPGDPGPMGPIGSRGPEGPPGKPGEDGEPGRNGNPGEVGFA
:: :. : : : .: :: :::::.:: : .:: :: ::::. :.:: .:. : :
CCDS53 GLTGRPGPVGGPGSSGAKGESGDPGPQGPRGVQGPPGPTGKPGKRGRPGADGGRGMPGEP
500 510 520 530 540 550
290 300 310 320 330 340
pF1KB3 GSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEVGAPGSKGEAGPTGPMGAMGPLGPRGMP
:. : ::: : ::::: :::::..: .:: : : : .:: : :: : : ::::.
CCDS53 GAKGDRGFDGLPGLPGDKGHRGERGPQGPPGPPGDDGMRGEDGEIGPRGLPGEAGPRGL-
560 570 580 590 600 610
350 360 370 380 390 400
pF1KB3 GERGRLGPQGAPGQRGAHGMPGKPGPMGPLGIPGSSGFPGNPGMKGEAGPTGARGPEGPQ
:::.:.:: : :: : :: :: : : .: :: ::..:. :: : ::.::
CCDS53 -----LGPRGTPGAPGQPGMAGVDGPPGPKGNMGPQGEPGPPGQQGNPGPQGLPGPQGPI
620 630 640 650 660
410 420 430 440 450 460
pF1KB3 GQRGETGPPGPVGSPGLPGAIGTDGTPGAKGPTGSPGTSGPPGSAGPPGSPGPQGSTGPQ
: :: :: : : ::::: : : :: .: .: :. :::: :: : :::.: : .
CCDS53 GPPGEKGPQGKPGLAGLPGADGPPGHPGKEGQSGEKGALGPPGPQGPIGYPGPRGVKGAD
670 680 690 700 710 720
470 480 490 500 510
pF1KB3 GIRG------QPGDPGVPGFKGEAGPKGEPGPHGIQGPIGPPGEEGKRGPRGDPGTVGPP
:.:: . :. : :::::. : ::. : : ::: ::.: .::.: : .: :
CCDS53 GVRGLKGSKGEKGEDGFPGFKGDMGLKGDRGE---VGQIGPRGEDGPEGPKGRAGPTGDP
730 740 750 760 770 780
520 530 540 550 560 570
pF1KB3 GPVGERGAPGNRGFPGSDGLPG---PKGAQGERGPVGSSGPKGSQGDPGRPGEPGLPGAR
:: :. : :. : :: : :: :::. : : :..: ::..: :.:: : :
CCDS53 GPSGQAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEKGARGVAGKPGPRGQRGPT
790 800 810 820 830 840
580 590 600 610 620
pF1KB3 GLTGNPGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGK----
: :. :..:: :: :: :. : :: ::::: : .: : .:.::::: : :::
CCDS53 GPRGSRGARGPTGKPGPKGTSGGDGPPGPPGERGPQGPQGPVGFPGPKGPPGPPGKDGLP
850 860 870 880 890 900
630 640 650 660 670 680
pF1KB3 --PGEAGNAGVPGQRGAPGKDGEVGPSGPVGPPGLAGERGEQGPPGPTGFQGLPGPPGPP
::. :..: :. : :: : :::.::.: : ::::. ::::: : ::::: :
CCDS53 GHPGQRGETGFQGKTGPPGPGGVVGPQGPTGETGPIGERGHPGPPGPPGEQGLPGAAGKE
910 920 930 940 950 960
690 700 710 720 730 740
pF1KB3 GEGGKPGDQGVPGDPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSP
: : :: ::. : : : : :: ::::: :: : :: :: : .:: :: :::
CCDS53 GAKGDPGPQGISGKDG------PAGLRGFPGERGLPGAQGAPGLKGGEGPQGPPGPVGSP
970 980 990 1000 1010 1020
750 760 770 780 790 800
pF1KB3 GPSGTPGDTGPPGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPP
: :. : .:: :: : :: .: ::: :..:. :::: .: :: ::..: :.: :
CCDS53 GERGSAGTAGPIGLPGRPGPQG---PPGPAGEKGAPGEKGPQGPAGRDGVQG---PVGLP
1030 1040 1050 1060 1070
810 820 830 840 850 860
pF1KB3 GPAGPTGEKGEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEP
:::::.: :: : .: .: ::..:. :..::::: : :. :: : : : ::::
CCDS53 GPAGPAGSPGEDGDKGEIGEPGQKGSKGDKGENGPPGPPGLQGPVGAPGIAGGDGEPGPR
1080 1090 1100 1110 1120 1130
870 880 890 900 910 920
pF1KB3 GQKGDAGSPGPQGLAGSPGPHGPNGVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPAGAP
::.: :. : .: : ::: :: :. :: :::: : :..: .::::: :
CCDS53 GQQGMFGQKGDEGARGFPGPPGPIGLQGL------PGPPGEKGENGDVGPMGPPGPPGPR
1140 1150 1160 1170 1180
930 940 950 960 970 980
pF1KB3 GPAGPLGEPGKEGPPGLRGDPGSHGRVGDRGPAGPPGGPGD------KGDPGEDGQPGPD
:: :: : : .:::: :. :. :. :. : :: :: ::. ::. :: :. ::
CCDS53 GPQGPNGADGPQGPPGSVGSVGGVGEKGEPGEAGNPGPPGEAGVGGPKGERGEKGEAGPP
1190 1200 1210 1220 1230 1240
990 1000 1010 1020 1030 1040
pF1KB3 GPPGPAGTTGQRGIVGMPGQRGERGMPGLPGPAGTPGKVGPTGATGDKGPPGPVGPPGSN
: :: :. : : : :. : :.:: ::: : :: .: :. :::: : : ::
CCDS53 GAAGPPGAKGPPGDDGPKGNPGPVGFPGDPGPPGEPGPAGQDGVGGDKGEDGDPGQPGPP
1250 1260 1270 1280 1290 1300
1050 1060 1070 1080 1090
pF1KB3 GPVGEPGPEGPAGNDGTPGRDGAVGERGDRGDPGPAGL---PGSQGAPGTPGPVGAPGDA
:: :: :: :: :. : :: :: :..:..: : :: ::. : : ::.: ::
CCDS53 GPSGEAGPPGPPGKRGPPGAAGAEGRQGEKGAKGEAGAEGPPGKTGPVGPQGPAGKPGPE
1310 1320 1330 1340 1350 1360
1100 1110 1120 1130 1140 1150
pF1KB3 GQRGDPGSRGPIGPPGRAGKRGLPGPQGPRGDKGDHGDRGDRGQKGHRGFTGLQGLPGPP
: :: :: : : :: ::. : :::.:: : : .:: :..:.::: :. :: : ::
CCDS53 GLRGIPGPVGEQGLPGAAGQDGPPGPMGPPGLPGLKGDPGSKGEKGHPGLIGLIGPPGEQ
1370 1380 1390 1400 1410 1420
1160 1170 1180 1190 1200 1210
pF1KB3 GPNGEQG---SAGIPGPFGPRGPPGPVGPSGKEGNPGPLGPIGPPGVRGSVGEAGPEGPP
: .:..: . : :: : : :::.:: : : :: :: :: : .::.: :: .:
CCDS53 GEKGDRGLPGTQGSPGAKGDGGIPGPAGPLGPPGPPGLPGPQGPKGNKGSTGPAGQKGDS
1430 1440 1450 1460 1470 1480
1220 1230 1240 1250 1260 1270
pF1KB3 GEPGPPGPPGPPGHLTAALGDIMGHYDESMPDPLPEFTEDQAAPDDKNKTDPGVHATLKS
: ::::: :::::.. : . .. . . . ..:. : . . ..:.:
CCDS53 GLPGPPGSPGPPGEVIQPLPILSSKKTRRHTEGMQADADDNIL--DYSDGMEEIFGSLNS
1490 1500 1510 1520 1530 1540
1280 1290 1300 1310 1320 1330
pF1KB3 LSSQIETMRSPDGSKKHPARTCDDLKLCHSAKQSGEYWIDPNQGSVEDAIKVYCNMETG-
:...:: :. : :.. .::::: ::.: : .:::::::::: :..:::::. .:
CCDS53 LKQDIEHMKFPMGTQTNPARTCKDLQLSHPDFPDGEYWIDPNQGCSGDSFKVYCNFTSGG
1550 1560 1570 1580 1590 1600
1340 1350 1360 1370 1380 1390
pF1KB3 ETCISANPSSVP-RKTWWASKSPDNKPVWYGLDMNRGSQFAYGDHQSPNTAITQMTFLRL
:::: . .: : . : ...: . :.. ...::. ..: : .. . ..:::::.:
CCDS53 ETCIYPDKKSEGVRISSWPKEKPGS---WFS-EFKRGKLLSYLDVEGNSINMVQMTFLKL
1610 1620 1630 1640 1650 1660
1400 1410 1420 1430 1440 1450
pF1KB3 LSKEASQNITYICKNSVGYMDDQAKNLKKAVVLKGANDLDIKAEGNIRFRYIVLQDTCSK
:. : ::.:: :..:....: .. . ::. . :.:: ... ..: .. .: : :..
CCDS53 LTASARQNFTYHCHQSAAWYDVSSGSYDKALRFLGSNDEEMSYDNNPFIK--TLYDGCAS
1670 1680 1690 1700 1710 1720
1460 1470 1480 1490
pF1KB3 RNGNVGKTVFEYRTQNVARLPIIDLAPVDVGGTDQEFGVEIGPVCFV
:.: :::.: : .. ..::.:. : : .:.:: :.:::::.
CCDS53 RKG-YEKTVIEINTPKIDQVPIVDVMINDFGDQNQKFGFEVGPVCFLG
1730 1740 1750 1760
>>CCDS778.1 COL11A1 gene_id:1301|Hs108|chr1 (1806 aa)
initn: 6719 init1: 3431 opt: 4366 Z-score: 1673.6 bits: 322.6 E(32554): 6.7e-87
Smith-Waterman score: 4378; 46.1% identity (62.1% similar) in 1457 aa overlap (85-1499:393-1805)
60 70 80 90 100
pF1KB3 KPAPCQICVCDNGAILCDKIECQDVLDCADPVTPP----GECCPVCSQ-TPGGGNTNFGR
:..:: : :. .. : . : . .
CCDS77 KEIDGRDSDLLVDGDLGEYDFYEYKEYEDKPTSPPNEEFGPGVPAETDITETSINGHGAY
370 380 390 400 410 420
110 120 130 140 150 160
pF1KB3 GRKGQKGEPGLVPVVTGIRGRPGPAGPPGSQGPRGERGPKGRPGPRGPQGIDGEPGVPGQ
:.:::::::..: ..: :::::: : .:: : .:: : :: : .: :.::.::
CCDS77 GEKGQKGEPAVVEPGMLVEGPPGPAGPAGIMGPPGLQGPTGPPGDPGDRGPPGRPGLPGA
430 440 450 460 470 480
170 180 190 200 210 220
pF1KB3 PGAPGPPGH----PSHPGPDGLSRP-FSAQMAGLDEKSGLGSQVGLMPGSVGPVGPRGPQ
: ::::: : . : :: . : .::: : .:. :. . .. :: ::.
CCDS77 DGLPGPPGTMLMLPFRYGGDGSKGPTISAQEAQ--------AQAILQQARIALRGPPGPM
490 500 510 520 530
230 240 250 260 270 280
pF1KB3 GLQGQQG---GAGPTGPPGEPGDPGPMGPIGSRGPEGPPGKPGEDGEPGRNGNPGEVGFA
:: :. : : : .: :: :::::.:: : .:: :: ::::. :.:: .:. : :
CCDS77 GLTGRPGPVGGPGSSGAKGESGDPGPQGPRGVQGPPGPTGKPGKRGRPGADGGRGMPGEP
540 550 560 570 580 590
290 300 310 320 330 340
pF1KB3 GSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEVGAPGSKGEAGPTGPMGAMGPLGPRGMP
:. : ::: : ::::: :::::..: .:: : : : .:: : :: : : ::::.
CCDS77 GAKGDRGFDGLPGLPGDKGHRGERGPQGPPGPPGDDGMRGEDGEIGPRGLPGEAGPRGL-
600 610 620 630 640 650
350 360 370 380 390 400
pF1KB3 GERGRLGPQGAPGQRGAHGMPGKPGPMGPLGIPGSSGFPGNPGMKGEAGPTGARGPEGPQ
:::.:.:: : :: : :: :: : : .: :: ::..:. :: : ::.::
CCDS77 -----LGPRGTPGAPGQPGMAGVDGPPGPKGNMGPQGEPGPPGQQGNPGPQGLPGPQGPI
660 670 680 690 700
410 420 430 440 450 460
pF1KB3 GQRGETGPPGPVGSPGLPGAIGTDGTPGAKGPTGSPGTSGPPGSAGPPGSPGPQGSTGPQ
: :: :: : : ::::: : : :: .: .: :. :::: :: : :::.: : .
CCDS77 GPPGEKGPQGKPGLAGLPGADGPPGHPGKEGQSGEKGALGPPGPQGPIGYPGPRGVKGAD
710 720 730 740 750 760
470 480 490 500 510
pF1KB3 GIRG------QPGDPGVPGFKGEAGPKGEPGPHGIQGPIGPPGEEGKRGPRGDPGTVGPP
:.:: . :. : :::::. : ::. : : ::: ::.: .::.: : .: :
CCDS77 GVRGLKGSKGEKGEDGFPGFKGDMGLKGDRGE---VGQIGPRGEDGPEGPKGRAGPTGDP
770 780 790 800 810 820
520 530 540 550 560 570
pF1KB3 GPVGERGAPGNRGFPGSDGLPG---PKGAQGERGPVGSSGPKGSQGDPGRPGEPGLPGAR
:: :. : :. : :: : :: :::. : : :..: ::..: :.:: : :
CCDS77 GPSGQAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEKGARGVAGKPGPRGQRGPT
830 840 850 860 870 880
580 590 600 610 620
pF1KB3 GLTGNPGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGK----
: :. :..:: :: :: :. : :: ::::: : .: : .:.::::: : :::
CCDS77 GPRGSRGARGPTGKPGPKGTSGGDGPPGPPGERGPQGPQGPVGFPGPKGPPGPPGKDGLP
890 900 910 920 930 940
630 640 650 660 670 680
pF1KB3 --PGEAGNAGVPGQRGAPGKDGEVGPSGPVGPPGLAGERGEQGPPGPTGFQGLPGPPGPP
::. :..: :. : :: : :::.::.: : ::::. ::::: : ::::: :
CCDS77 GHPGQRGETGFQGKTGPPGPGGVVGPQGPTGETGPIGERGHPGPPGPPGEQGLPGAAGKE
950 960 970 980 990 1000
690 700 710 720 730 740
pF1KB3 GEGGKPGDQGVPGDPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSP
: : :: ::. : : : : :: ::::: :: : :: :: : .:: :: :::
CCDS77 GAKGDPGPQGISGKDG------PAGLRGFPGERGLPGAQGAPGLKGGEGPQGPPGPVGSP
1010 1020 1030 1040 1050
750 760 770 780 790 800
pF1KB3 GPSGTPGDTGPPGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPP
: :. : .:: :: : :: .: ::: :..:. :::: .: :: ::..: :.: :
CCDS77 GERGSAGTAGPIGLPGRPGPQG---PPGPAGEKGAPGEKGPQGPAGRDGVQG---PVGLP
1060 1070 1080 1090 1100 1110
810 820 830 840 850 860
pF1KB3 GPAGPTGEKGEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEP
:::::.: :: : .: .: ::..:. :..::::: : :. :: : : : ::::
CCDS77 GPAGPAGSPGEDGDKGEIGEPGQKGSKGDKGENGPPGPPGLQGPVGAPGIAGGDGEPGPR
1120 1130 1140 1150 1160 1170
870 880 890 900 910 920
pF1KB3 GQKGDAGSPGPQGLAGSPGPHGPNGVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPAGAP
::.: :. : .: : ::: :: :. :: :::: : :..: .::::: :
CCDS77 GQQGMFGQKGDEGARGFPGPPGPIGLQGL------PGPPGEKGENGDVGPMGPPGPPGPR
1180 1190 1200 1210 1220
930 940 950 960 970 980
pF1KB3 GPAGPLGEPGKEGPPGLRGDPGSHGRVGDRGPAGPPGGPGD------KGDPGEDGQPGPD
:: :: : : .:::: :. :. :. :. : :: :: ::. ::. :: :. ::
CCDS77 GPQGPNGADGPQGPPGSVGSVGGVGEKGEPGEAGNPGPPGEAGVGGPKGERGEKGEAGPP
1230 1240 1250 1260 1270 1280
990 1000 1010 1020 1030 1040
pF1KB3 GPPGPAGTTGQRGIVGMPGQRGERGMPGLPGPAGTPGKVGPTGATGDKGPPGPVGPPGSN
: :: :. : : : :. : :.:: ::: : :: .: :. :::: : : ::
CCDS77 GAAGPPGAKGPPGDDGPKGNPGPVGFPGDPGPPGEPGPAGQDGVGGDKGEDGDPGQPGPP
1290 1300 1310 1320 1330 1340
1050 1060 1070 1080 1090
pF1KB3 GPVGEPGPEGPAGNDGTPGRDGAVGERGDRGDPGPAGL---PGSQGAPGTPGPVGAPGDA
:: :: :: :: :. : :: :: :..:..: : :: ::. : : ::.: ::
CCDS77 GPSGEAGPPGPPGKRGPPGAAGAEGRQGEKGAKGEAGAEGPPGKTGPVGPQGPAGKPGPE
1350 1360 1370 1380 1390 1400
1100 1110 1120 1130 1140 1150
pF1KB3 GQRGDPGSRGPIGPPGRAGKRGLPGPQGPRGDKGDHGDRGDRGQKGHRGFTGLQGLPGPP
: :: :: : : :: ::. : :::.:: : : .:: :..:.::: :. :: : ::
CCDS77 GLRGIPGPVGEQGLPGAAGQDGPPGPMGPPGLPGLKGDPGSKGEKGHPGLIGLIGPPGEQ
1410 1420 1430 1440 1450 1460
1160 1170 1180 1190 1200 1210
pF1KB3 GPNGEQG---SAGIPGPFGPRGPPGPVGPSGKEGNPGPLGPIGPPGVRGSVGEAGPEGPP
: .:..: . : :: : : :::.:: : : :: :: :: : .::.: :: .:
CCDS77 GEKGDRGLPGTQGSPGAKGDGGIPGPAGPLGPPGPPGLPGPQGPKGNKGSTGPAGQKGDS
1470 1480 1490 1500 1510 1520
1220 1230 1240 1250 1260 1270
pF1KB3 GEPGPPGPPGPPGHLTAALGDIMGHYDESMPDPLPEFTEDQAAPDDKNKTDPGVHATLKS
: ::::: :::::.. : . .. . . . ..:. : . . ..:.:
CCDS77 GLPGPPGSPGPPGEVIQPLPILSSKKTRRHTEGMQADADDNIL--DYSDGMEEIFGSLNS
1530 1540 1550 1560 1570 1580
1280 1290 1300 1310 1320 1330
pF1KB3 LSSQIETMRSPDGSKKHPARTCDDLKLCHSAKQSGEYWIDPNQGSVEDAIKVYCNMETG-
:...:: :. : :.. .::::: ::.: : .:::::::::: :..:::::. .:
CCDS77 LKQDIEHMKFPMGTQTNPARTCKDLQLSHPDFPDGEYWIDPNQGCSGDSFKVYCNFTSGG
1590 1600 1610 1620 1630 1640
1340 1350 1360 1370 1380 1390
pF1KB3 ETCISANPSSVP-RKTWWASKSPDNKPVWYGLDMNRGSQFAYGDHQSPNTAITQMTFLRL
:::: . .: : . : ...: . :.. ...::. ..: : .. . ..:::::.:
CCDS77 ETCIYPDKKSEGVRISSWPKEKPGS---WFS-EFKRGKLLSYLDVEGNSINMVQMTFLKL
1650 1660 1670 1680 1690 1700
1400 1410 1420 1430 1440 1450
pF1KB3 LSKEASQNITYICKNSVGYMDDQAKNLKKAVVLKGANDLDIKAEGNIRFRYIVLQDTCSK
:. : ::.:: :..:....: .. . ::. . :.:: ... ..: .. .: : :..
CCDS77 LTASARQNFTYHCHQSAAWYDVSSGSYDKALRFLGSNDEEMSYDNNPFIK--TLYDGCAS
1710 1720 1730 1740 1750
1460 1470 1480 1490
pF1KB3 RNGNVGKTVFEYRTQNVARLPIIDLAPVDVGGTDQEFGVEIGPVCFV
:.: :::.: : .. ..::.:. : : .:.:: :.:::::.
CCDS77 RKG-YEKTVIEINTPKIDQVPIVDVMINDFGDQNQKFGFEVGPVCFLG
1760 1770 1780 1790 1800
1499 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Wed Nov 2 22:48:25 2016 done: Wed Nov 2 22:48:26 2016
Total Scan time: 5.120 Total Display time: 0.850
Function used was FASTA [36.3.4 Apr, 2011]