Result of FASTA (ccds) for
pF1KB3327
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB3327, 895 aa
1>>>pF1KB3327 895 - 895 aa - 895 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 10.2353+/-0.00116; mu= 2.3314+/- 0.070
mean_var=394.1928+/-81.938, 0's: 0 Z-trim(114.5): 839 B-trim: 0 in 0/53
Lambda= 0.064598
statistics sampled from 14167 (15072) to 14167 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.748), E-opt: 0.2 (0.463), width: 16
Scan time: 5.270
The best scores are: opt bits E(32554)
CCDS1402.1 ZNF281 gene_id:23528|Hs108|chr1 ( 895) 5974 571.6 2.2e-162
CCDS60384.1 ZNF281 gene_id:23528|Hs108|chr1 ( 859) 5392 517.3 4.6e-146
CCDS3031.1 ZNF148 gene_id:7707|Hs108|chr3 ( 794) 715 81.4 7.1e-15
>>CCDS1402.1 ZNF281 gene_id:23528|Hs108|chr1 (895 aa)
initn: 5974 init1: 5974 opt: 5974 Z-score: 3028.7 bits: 571.6 E(32554): 2.2e-162
Smith-Waterman score: 5974; 100.0% identity (100.0% similar) in 895 aa overlap (1-895:1-895)
10 20 30 40 50 60
pF1KB3 MKIGSGFLSGGGGTGSSGGSGSGGGGSGGGGGGGSSGRRAEMEPTFPQGMVMFNHRLPPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 MKIGSGFLSGGGGTGSSGGSGSGGGGSGGGGGGGSSGRRAEMEPTFPQGMVMFNHRLPPV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 TSFTRPAGSAAPPPQCVLSSSTSAAPAAEPPPPPAPDMTFKKEPAASAAAFPSQRTSWGF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 TSFTRPAGSAAPPPQCVLSSSTSAAPAAEPPPPPAPDMTFKKEPAASAAAFPSQRTSWGF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 LQSLVSIKQEKPADPEEQQSHHHHHHHHYGGLFAGAEERSPGLGGGEGGSHGVIQDLSIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 LQSLVSIKQEKPADPEEQQSHHHHHHHHYGGLFAGAEERSPGLGGGEGGSHGVIQDLSIL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB3 HQHVQQQPAQHHRDVLLSSSSRTDDHHGTEEPKQDTNVKKAKRPKPESQGIKAKRKPSAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 HQHVQQQPAQHHRDVLLSSSSRTDDHHGTEEPKQDTNVKKAKRPKPESQGIKAKRKPSAS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB3 SKPSLVGDGEGAILSPSQKPHICDHCSAAFRSSYHLRRHVLIHTGERPFQCSQCSMGFIQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 SKPSLVGDGEGAILSPSQKPHICDHCSAAFRSSYHLRRHVLIHTGERPFQCSQCSMGFIQ
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB3 KYLLQRHEKIHSREKPFGCDQCSMKFIQKYHMERHKRTHSGEKPYKCDTCQQYFSRTDRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 KYLLQRHEKIHSREKPFGCDQCSMKFIQKYHMERHKRTHSGEKPYKCDTCQQYFSRTDRL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB3 LKHRRTCGEVIVKGATSAEPGSSNHTNMGNLAVLSQGNTSSSRRKTKSKSIAIENKEQKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 LKHRRTCGEVIVKGATSAEPGSSNHTNMGNLAVLSQGNTSSSRRKTKSKSIAIENKEQKT
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB3 GKTNESQISNNINMQSYSVEMPTVSSSGGIIGTGIDELQKRVPKLIFKKGSRKNTDKNYL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 GKTNESQISNNINMQSYSVEMPTVSSSGGIIGTGIDELQKRVPKLIFKKGSRKNTDKNYL
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB3 NFVSPLPDIVGQKSLSGKPSGSLGIVSNNSVETIGLLQSTSGKQGQISSNYDDAMQFSKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 NFVSPLPDIVGQKSLSGKPSGSLGIVSNNSVETIGLLQSTSGKQGQISSNYDDAMQFSKK
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB3 RRYLPTASSNSAFSINVGHMVSQQSVIQSAGVSVLDNEAPLSLIDSSALNAEIKSCHDKS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 RRYLPTASSNSAFSINVGHMVSQQSVIQSAGVSVLDNEAPLSLIDSSALNAEIKSCHDKS
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB3 GIPDEVLQSILDQYSNKSESQKEDPFNIAEPRVDLHTSGEHSELVQEENLSPGTQTPSND
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 GIPDEVLQSILDQYSNKSESQKEDPFNIAEPRVDLHTSGEHSELVQEENLSPGTQTPSND
610 620 630 640 650 660
670 680 690 700 710 720
pF1KB3 KASMLQEYSKYLQQAFEKSTNASFTLGHGFQFVSLSSPLHNHTLFPEKQIYTTSPLECGF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 KASMLQEYSKYLQQAFEKSTNASFTLGHGFQFVSLSSPLHNHTLFPEKQIYTTSPLECGF
670 680 690 700 710 720
730 740 750 760 770 780
pF1KB3 GQSVTSVLPSSLPKPPFGMLFGSQPGLYLSALDATHQQLTPSQELDDLIDSQKNLETSSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 GQSVTSVLPSSLPKPPFGMLFGSQPGLYLSALDATHQQLTPSQELDDLIDSQKNLETSSA
730 740 750 760 770 780
790 800 810 820 830 840
pF1KB3 FQSSSQKLTSQKEQKNLESSTGFQIPSQELASQIDPQKDIEPRTTYQIENFAQAFGSQFK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 FQSSSQKLTSQKEQKNLESSTGFQIPSQELASQIDPQKDIEPRTTYQIENFAQAFGSQFK
790 800 810 820 830 840
850 860 870 880 890
pF1KB3 SGSRVPMTFITNSNGEVDHRVRTSVSDFSGYTNMMSDVSEPCSTRVKTPTSQSYR
:::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 SGSRVPMTFITNSNGEVDHRVRTSVSDFSGYTNMMSDVSEPCSTRVKTPTSQSYR
850 860 870 880 890
>>CCDS60384.1 ZNF281 gene_id:23528|Hs108|chr1 (859 aa)
initn: 5713 init1: 5392 opt: 5392 Z-score: 2735.8 bits: 517.3 E(32554): 4.6e-146
Smith-Waterman score: 5645; 96.0% identity (96.0% similar) in 895 aa overlap (1-895:1-859)
10 20 30 40 50 60
pF1KB3 MKIGSGFLSGGGGTGSSGGSGSGGGGSGGGGGGGSSGRRAEMEPTFPQGMVMFNHRLPPV
::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 MKIGSGFLSGGGGTGSSGGSGSGGGGSGGGGGGGSSGRRAEMEPTFPQ------------
10 20 30 40
70 80 90 100 110 120
pF1KB3 TSFTRPAGSAAPPPQCVLSSSTSAAPAAEPPPPPAPDMTFKKEPAASAAAFPSQRTSWGF
::::::::::::::::::::::::::::::::::::
CCDS60 ------------------------APAAEPPPPPAPDMTFKKEPAASAAAFPSQRTSWGF
50 60 70 80
130 140 150 160 170 180
pF1KB3 LQSLVSIKQEKPADPEEQQSHHHHHHHHYGGLFAGAEERSPGLGGGEGGSHGVIQDLSIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 LQSLVSIKQEKPADPEEQQSHHHHHHHHYGGLFAGAEERSPGLGGGEGGSHGVIQDLSIL
90 100 110 120 130 140
190 200 210 220 230 240
pF1KB3 HQHVQQQPAQHHRDVLLSSSSRTDDHHGTEEPKQDTNVKKAKRPKPESQGIKAKRKPSAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 HQHVQQQPAQHHRDVLLSSSSRTDDHHGTEEPKQDTNVKKAKRPKPESQGIKAKRKPSAS
150 160 170 180 190 200
250 260 270 280 290 300
pF1KB3 SKPSLVGDGEGAILSPSQKPHICDHCSAAFRSSYHLRRHVLIHTGERPFQCSQCSMGFIQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 SKPSLVGDGEGAILSPSQKPHICDHCSAAFRSSYHLRRHVLIHTGERPFQCSQCSMGFIQ
210 220 230 240 250 260
310 320 330 340 350 360
pF1KB3 KYLLQRHEKIHSREKPFGCDQCSMKFIQKYHMERHKRTHSGEKPYKCDTCQQYFSRTDRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 KYLLQRHEKIHSREKPFGCDQCSMKFIQKYHMERHKRTHSGEKPYKCDTCQQYFSRTDRL
270 280 290 300 310 320
370 380 390 400 410 420
pF1KB3 LKHRRTCGEVIVKGATSAEPGSSNHTNMGNLAVLSQGNTSSSRRKTKSKSIAIENKEQKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 LKHRRTCGEVIVKGATSAEPGSSNHTNMGNLAVLSQGNTSSSRRKTKSKSIAIENKEQKT
330 340 350 360 370 380
430 440 450 460 470 480
pF1KB3 GKTNESQISNNINMQSYSVEMPTVSSSGGIIGTGIDELQKRVPKLIFKKGSRKNTDKNYL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 GKTNESQISNNINMQSYSVEMPTVSSSGGIIGTGIDELQKRVPKLIFKKGSRKNTDKNYL
390 400 410 420 430 440
490 500 510 520 530 540
pF1KB3 NFVSPLPDIVGQKSLSGKPSGSLGIVSNNSVETIGLLQSTSGKQGQISSNYDDAMQFSKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 NFVSPLPDIVGQKSLSGKPSGSLGIVSNNSVETIGLLQSTSGKQGQISSNYDDAMQFSKK
450 460 470 480 490 500
550 560 570 580 590 600
pF1KB3 RRYLPTASSNSAFSINVGHMVSQQSVIQSAGVSVLDNEAPLSLIDSSALNAEIKSCHDKS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 RRYLPTASSNSAFSINVGHMVSQQSVIQSAGVSVLDNEAPLSLIDSSALNAEIKSCHDKS
510 520 530 540 550 560
610 620 630 640 650 660
pF1KB3 GIPDEVLQSILDQYSNKSESQKEDPFNIAEPRVDLHTSGEHSELVQEENLSPGTQTPSND
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 GIPDEVLQSILDQYSNKSESQKEDPFNIAEPRVDLHTSGEHSELVQEENLSPGTQTPSND
570 580 590 600 610 620
670 680 690 700 710 720
pF1KB3 KASMLQEYSKYLQQAFEKSTNASFTLGHGFQFVSLSSPLHNHTLFPEKQIYTTSPLECGF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 KASMLQEYSKYLQQAFEKSTNASFTLGHGFQFVSLSSPLHNHTLFPEKQIYTTSPLECGF
630 640 650 660 670 680
730 740 750 760 770 780
pF1KB3 GQSVTSVLPSSLPKPPFGMLFGSQPGLYLSALDATHQQLTPSQELDDLIDSQKNLETSSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 GQSVTSVLPSSLPKPPFGMLFGSQPGLYLSALDATHQQLTPSQELDDLIDSQKNLETSSA
690 700 710 720 730 740
790 800 810 820 830 840
pF1KB3 FQSSSQKLTSQKEQKNLESSTGFQIPSQELASQIDPQKDIEPRTTYQIENFAQAFGSQFK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 FQSSSQKLTSQKEQKNLESSTGFQIPSQELASQIDPQKDIEPRTTYQIENFAQAFGSQFK
750 760 770 780 790 800
850 860 870 880 890
pF1KB3 SGSRVPMTFITNSNGEVDHRVRTSVSDFSGYTNMMSDVSEPCSTRVKTPTSQSYR
:::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 SGSRVPMTFITNSNGEVDHRVRTSVSDFSGYTNMMSDVSEPCSTRVKTPTSQSYR
810 820 830 840 850
>>CCDS3031.1 ZNF148 gene_id:7707|Hs108|chr3 (794 aa)
initn: 951 init1: 679 opt: 715 Z-score: 380.5 bits: 81.4 E(32554): 7.1e-15
Smith-Waterman score: 1369; 40.2% identity (68.7% similar) in 614 aa overlap (209-785:121-728)
180 190 200 210 220 230
pF1KB3 ILHQHVQQQPAQHHRDVLLSSSSRTDDHHGTEEPKQDTNVKKAKRPKPESQGIKAKRKPS
:. .: :: : .: . : :::
CCDS30 EEQMETHERLPQGLQYALNVPISVKQEITFTDVSEQLMRDKKQIR-EPVDLQKKKKRKQR
100 110 120 130 140
240 250 260 270 280 290
pF1KB3 ASSKPSLVGDGEGAILSPSQKPHICDHCSAAFRSSYHLRRHVLIHTGERPFQCSQCSMGF
. .: ... .:.. . : :.:.::.::::..:::.:::.:::::.:::::::.: :
CCDS30 SPAKILTINE-DGSLGLKTPKSHVCEHCNAAFRTNYHLQRHVFIHTGEKPFQCSQCDMRF
150 160 170 180 190 200
300 310 320 330 340 350
pF1KB3 IQKYLLQRHEKIHSREKPFGCDQCSMKFIQKYHMERHKRTHSGEKPYKCDTCQQYFSRTD
:::::::::::::. :::: ::.:.:.::::::::::::::::::::.:. : :::::::
CCDS30 IQKYLLQRHEKIHTGEKPFRCDECGMRFIQKYHMERHKRTHSGEKPYQCEYCLQYFSRTD
210 220 230 240 250 260
360 370 380 390 400
pF1KB3 RLLKHRRTCGE--------VIVKGATSAEPGSSNHTNMGNLAVLSQGNTSSSRRKTKS--
:.:::.: : : .::. . .:. .. . : . . .....:...
CCDS30 RVLKHKRMCHENHDKKLNRCAIKGGLLTSEEDSGFSTSPKDNSLPKKKRQKTEKKSSGMD
270 280 290 300 310 320
410 420 430 440 450 460
pF1KB3 KSIAIENKEQKTGK-------TNESQISNNINMQSYSVEMPTVSSSGGIIGTGIDELQKR
: :..... : : .. ...... . :.:::: : .:. . . :..
CCDS30 KESALDKSDLKKDKNDYLPLYSSSTKVKDEYMVAEYAVEMPHSSVGGSHLEDASGEIHP-
330 340 350 360 370 380
470 480 490 500 510
pF1KB3 VPKLIFKKGSRKNTDKNYLN---FVSPLPDIVGQK------SLSGKPSGSLGIVSNNSVE
:::..:: . : . :. :. .::: .: : : . : .: ...
CCDS30 -PKLVLKKINSKRSLKQPLEQNQTISPLSTYEESKVSKYAFELVDKQA-LLDSEGNADID
390 400 410 420 430 440
520 530 540 550 560 570
pF1KB3 TIGLLQSTSGKQGQISSNYDDAMQFSKKRRYLPTASSNS-AFSINVGHMVSQQSVIQSAG
. :: .: . :.:::::::: ::.::: .::.:: ...::: ..:: :: :.:
CCDS30 QVDNLQEGPSKPVHSSTNYDDAMQFLKKKRYLQAASNNSREYALNVGTIASQPSVTQAAV
450 460 470 480 490 500
580 590 600 610 620 630
pF1KB3 VSVLDNEAPLSLIDSSALNAEIKSCHDKSGIPDEVLQSILDQYSNKSESQKEDPFNIAEP
.::.:. . :...:.:::.:::: :::. :::::::..::.::.:...:.: :..:.
CCDS30 ASVIDESTTASILESQALNVEIKSNHDKNVIPDEVLQTLLDHYSHKANGQHEISFSVADT
510 520 530 540 550 560
640 650 660 670 680
pF1KB3 RVDLH---TSGEHSELVQEENLSPGTQTPSNDKASMLQEYSKYLQQAFEKST-NASFTLG
.: .:.: :.. ::.. ..:. :.:::.:::::::.::::..... : .. .
CCDS30 EVTSSISINSSEVPEVTPSENVGSSSQASSSDKANMLQEYSKFLQQALDRTSQNDAYLNS
570 580 590 600 610 620
690 700 710 720 730 740
pF1KB3 HGFQFVSLSSPLHNHTLFP--EKQIYTTSPLECGFGQSVTSVLPSSLPKPPFGMLFG-SQ
...::. .. : :. : .::.:.: :.. .: ....: : .. : ::.. : ::
CCDS30 PSLNFVTDNQTLPNQPAFSSIDKQVYATMPIN-SFRSGMNSPLRTTPDKSHFGLIVGDSQ
630 640 650 660 670 680
750 760 770 780 790 800
pF1KB3 PGLYLSALDATHQQLTPSQELDDLIDSQKNLETS---SAFQSSSQKLTSQKEQKNLESST
.. .:. ...: . : .:.. : . :::. :.. .:.: ::
CCDS30 HSFPFSGDETNHASATSTQDFLDQVTSQKKAEAQPVHQAYQMSSFEQPFRAPYHGSRAGI
690 700 710 720 730 740
810 820 830 840 850 860
pF1KB3 GFQIPSQELASQIDPQKDIEPRTTYQIENFAQAFGSQFKSGSRVPMTFITNSNGEVDHRV
CCDS30 ATQFSTANGQVNLRGPGTSAEFSEFPLVNVNDNRAGMTSSPDATTGQTFG
750 760 770 780 790
895 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 12:52:44 2016 done: Thu Nov 3 12:52:45 2016
Total Scan time: 5.270 Total Display time: 0.090
Function used was FASTA [36.3.4 Apr, 2011]