Result of FASTA (omim) for
pF1KB0499
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB0499, 754 aa
1>>>pF1KB0499 754 - 754 aa - 754 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 8.3348+/-0.000464; mu= 4.8670+/- 0.029
mean_var=143.3276+/-29.325, 0's: 0 Z-trim(113.5): 54 B-trim: 261 in 1/51
Lambda= 0.107130
statistics sampled from 22798 (22846) to 22798 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.632), E-opt: 0.2 (0.268), width: 16
Scan time: 9.790
The best scores are: opt bits E(85289)
NP_002476 (OMIM: 251260,602667,609135,613065) nibr ( 754) 4934 775.1 0
XP_011515347 (OMIM: 251260,602667,609135,613065) P ( 672) 4402 692.9 1.1e-198
NP_001019859 (OMIM: 251260,602667,609135,613065) n ( 672) 4402 692.9 1.1e-198
XP_011515348 (OMIM: 251260,602667,609135,613065) P ( 469) 3061 485.6 2e-136
XP_016868949 (OMIM: 251260,602667,609135,613065) P ( 461) 3000 476.2 1.4e-133
XP_016868951 (OMIM: 251260,602667,609135,613065) P ( 461) 3000 476.2 1.4e-133
XP_016868950 (OMIM: 251260,602667,609135,613065) P ( 461) 3000 476.2 1.4e-133
>>NP_002476 (OMIM: 251260,602667,609135,613065) nibrin i (754 aa)
initn: 4934 init1: 4934 opt: 4934 Z-score: 4131.4 bits: 775.1 E(85289): 0
Smith-Waterman score: 4934; 99.9% identity (100.0% similar) in 754 aa overlap (1-754:1-754)
10 20 30 40 50 60
pF1KB0 MWKLLPAAGPAGGEPYRLLTGVEYVVGRKNCAILIENDQSISRNHAVLTANFSVTNLSQT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 MWKLLPAAGPAGGEPYRLLTGVEYVVGRKNCAILIENDQSISRNHAVLTANFSVTNLSQT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB0 DEIPVLTLKDNSKYGTFVNEEKMQNGFSRTLKSGDGITFGVFGSKFRIEYEPLVACSSCL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 DEIPVLTLKDNSKYGTFVNEEKMQNGFSRTLKSGDGITFGVFGSKFRIEYEPLVACSSCL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB0 DVSGKTALNQAILQLGGFTVNNWTEECTHLVMVSVKVTIKTICALICGRPIVKPEYFTEF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 DVSGKTALNQAILQLGGFTVNNWTEECTHLVMVSVKVTIKTICALICGRPIVKPEYFTEF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB0 LKAVQSKKQPPQIESFYPPLDEPSIGSKNVDLSGRQERKQIFKGKTFIFLNAKQHKKLSS
::::.:::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 LKAVESKKQPPQIESFYPPLDEPSIGSKNVDLSGRQERKQIFKGKTFIFLNAKQHKKLSS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB0 AVVFGGGEARLITEENEEEHNFFLAPGTCVVDTGITNSQTLIPDCQKKWIQSIMDMLQRQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 AVVFGGGEARLITEENEEEHNFFLAPGTCVVDTGITNSQTLIPDCQKKWIQSIMDMLQRQ
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB0 GLRPIPEAEIGLAVIFMTTKNYCDPQGHPSTGLKTTTPGPSLSQGVSVDEKLMPSAPVNT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 GLRPIPEAEIGLAVIFMTTKNYCDPQGHPSTGLKTTTPGPSLSQGVSVDEKLMPSAPVNT
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB0 TTYVADTESEQADTWDLSERPKEIKVSKMEQKFRMLSQDAPTVKESCKTSSNNNSMVSNT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 TTYVADTESEQADTWDLSERPKEIKVSKMEQKFRMLSQDAPTVKESCKTSSNNNSMVSNT
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB0 LAKMRIPNYQLSPTKLPSINKSKDRASQQQQTNSIRNYFQPSTKKRERDEENQEMSSCKS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 LAKMRIPNYQLSPTKLPSINKSKDRASQQQQTNSIRNYFQPSTKKRERDEENQEMSSCKS
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB0 ARIETSCSLLEQTQPATPSLWKNKEQHLSENEPVDTNSDNNLFTDTDLKSIVKNSASKSH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 ARIETSCSLLEQTQPATPSLWKNKEQHLSENEPVDTNSDNNLFTDTDLKSIVKNSASKSH
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB0 AAEKLRSNKKREMDDVAIEDEVLEQLFKDTKPELEIDVKVQKQEEDVNVRKRPRMDIETN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 AAEKLRSNKKREMDDVAIEDEVLEQLFKDTKPELEIDVKVQKQEEDVNVRKRPRMDIETN
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB0 DTFSDEAVPESSKISQENEIGKKRELKEDSLWSAKEISNNDKLQDDSEMLPKKLLLTEFR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 DTFSDEAVPESSKISQENEIGKKRELKEDSLWSAKEISNNDKLQDDSEMLPKKLLLTEFR
610 620 630 640 650 660
670 680 690 700 710 720
pF1KB0 SLVIKNSTSRNPSGINDDYGQLKNFKKFKKVTYPGAGKLPHIIGGSDLIAHHARKNTELE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 SLVIKNSTSRNPSGINDDYGQLKNFKKFKKVTYPGAGKLPHIIGGSDLIAHHARKNTELE
670 680 690 700 710 720
730 740 750
pF1KB0 EWLRQEMEVQNQHAKEESLADDLFRYNPYLKRRR
::::::::::::::::::::::::::::::::::
NP_002 EWLRQEMEVQNQHAKEESLADDLFRYNPYLKRRR
730 740 750
>>XP_011515347 (OMIM: 251260,602667,609135,613065) PREDI (672 aa)
initn: 4402 init1: 4402 opt: 4402 Z-score: 3687.8 bits: 692.9 E(85289): 1.1e-198
Smith-Waterman score: 4402; 99.9% identity (100.0% similar) in 672 aa overlap (83-754:1-672)
60 70 80 90 100 110
pF1KB0 SVTNLSQTDEIPVLTLKDNSKYGTFVNEEKMQNGFSRTLKSGDGITFGVFGSKFRIEYEP
::::::::::::::::::::::::::::::
XP_011 MQNGFSRTLKSGDGITFGVFGSKFRIEYEP
10 20 30
120 130 140 150 160 170
pF1KB0 LVACSSCLDVSGKTALNQAILQLGGFTVNNWTEECTHLVMVSVKVTIKTICALICGRPIV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LVACSSCLDVSGKTALNQAILQLGGFTVNNWTEECTHLVMVSVKVTIKTICALICGRPIV
40 50 60 70 80 90
180 190 200 210 220 230
pF1KB0 KPEYFTEFLKAVQSKKQPPQIESFYPPLDEPSIGSKNVDLSGRQERKQIFKGKTFIFLNA
::::::::::::.:::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KPEYFTEFLKAVESKKQPPQIESFYPPLDEPSIGSKNVDLSGRQERKQIFKGKTFIFLNA
100 110 120 130 140 150
240 250 260 270 280 290
pF1KB0 KQHKKLSSAVVFGGGEARLITEENEEEHNFFLAPGTCVVDTGITNSQTLIPDCQKKWIQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KQHKKLSSAVVFGGGEARLITEENEEEHNFFLAPGTCVVDTGITNSQTLIPDCQKKWIQS
160 170 180 190 200 210
300 310 320 330 340 350
pF1KB0 IMDMLQRQGLRPIPEAEIGLAVIFMTTKNYCDPQGHPSTGLKTTTPGPSLSQGVSVDEKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IMDMLQRQGLRPIPEAEIGLAVIFMTTKNYCDPQGHPSTGLKTTTPGPSLSQGVSVDEKL
220 230 240 250 260 270
360 370 380 390 400 410
pF1KB0 MPSAPVNTTTYVADTESEQADTWDLSERPKEIKVSKMEQKFRMLSQDAPTVKESCKTSSN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MPSAPVNTTTYVADTESEQADTWDLSERPKEIKVSKMEQKFRMLSQDAPTVKESCKTSSN
280 290 300 310 320 330
420 430 440 450 460 470
pF1KB0 NNSMVSNTLAKMRIPNYQLSPTKLPSINKSKDRASQQQQTNSIRNYFQPSTKKRERDEEN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NNSMVSNTLAKMRIPNYQLSPTKLPSINKSKDRASQQQQTNSIRNYFQPSTKKRERDEEN
340 350 360 370 380 390
480 490 500 510 520 530
pF1KB0 QEMSSCKSARIETSCSLLEQTQPATPSLWKNKEQHLSENEPVDTNSDNNLFTDTDLKSIV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QEMSSCKSARIETSCSLLEQTQPATPSLWKNKEQHLSENEPVDTNSDNNLFTDTDLKSIV
400 410 420 430 440 450
540 550 560 570 580 590
pF1KB0 KNSASKSHAAEKLRSNKKREMDDVAIEDEVLEQLFKDTKPELEIDVKVQKQEEDVNVRKR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KNSASKSHAAEKLRSNKKREMDDVAIEDEVLEQLFKDTKPELEIDVKVQKQEEDVNVRKR
460 470 480 490 500 510
600 610 620 630 640 650
pF1KB0 PRMDIETNDTFSDEAVPESSKISQENEIGKKRELKEDSLWSAKEISNNDKLQDDSEMLPK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PRMDIETNDTFSDEAVPESSKISQENEIGKKRELKEDSLWSAKEISNNDKLQDDSEMLPK
520 530 540 550 560 570
660 670 680 690 700 710
pF1KB0 KLLLTEFRSLVIKNSTSRNPSGINDDYGQLKNFKKFKKVTYPGAGKLPHIIGGSDLIAHH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KLLLTEFRSLVIKNSTSRNPSGINDDYGQLKNFKKFKKVTYPGAGKLPHIIGGSDLIAHH
580 590 600 610 620 630
720 730 740 750
pF1KB0 ARKNTELEEWLRQEMEVQNQHAKEESLADDLFRYNPYLKRRR
::::::::::::::::::::::::::::::::::::::::::
XP_011 ARKNTELEEWLRQEMEVQNQHAKEESLADDLFRYNPYLKRRR
640 650 660 670
>>NP_001019859 (OMIM: 251260,602667,609135,613065) nibri (672 aa)
initn: 4402 init1: 4402 opt: 4402 Z-score: 3687.8 bits: 692.9 E(85289): 1.1e-198
Smith-Waterman score: 4402; 99.9% identity (100.0% similar) in 672 aa overlap (83-754:1-672)
60 70 80 90 100 110
pF1KB0 SVTNLSQTDEIPVLTLKDNSKYGTFVNEEKMQNGFSRTLKSGDGITFGVFGSKFRIEYEP
::::::::::::::::::::::::::::::
NP_001 MQNGFSRTLKSGDGITFGVFGSKFRIEYEP
10 20 30
120 130 140 150 160 170
pF1KB0 LVACSSCLDVSGKTALNQAILQLGGFTVNNWTEECTHLVMVSVKVTIKTICALICGRPIV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LVACSSCLDVSGKTALNQAILQLGGFTVNNWTEECTHLVMVSVKVTIKTICALICGRPIV
40 50 60 70 80 90
180 190 200 210 220 230
pF1KB0 KPEYFTEFLKAVQSKKQPPQIESFYPPLDEPSIGSKNVDLSGRQERKQIFKGKTFIFLNA
::::::::::::.:::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KPEYFTEFLKAVESKKQPPQIESFYPPLDEPSIGSKNVDLSGRQERKQIFKGKTFIFLNA
100 110 120 130 140 150
240 250 260 270 280 290
pF1KB0 KQHKKLSSAVVFGGGEARLITEENEEEHNFFLAPGTCVVDTGITNSQTLIPDCQKKWIQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KQHKKLSSAVVFGGGEARLITEENEEEHNFFLAPGTCVVDTGITNSQTLIPDCQKKWIQS
160 170 180 190 200 210
300 310 320 330 340 350
pF1KB0 IMDMLQRQGLRPIPEAEIGLAVIFMTTKNYCDPQGHPSTGLKTTTPGPSLSQGVSVDEKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IMDMLQRQGLRPIPEAEIGLAVIFMTTKNYCDPQGHPSTGLKTTTPGPSLSQGVSVDEKL
220 230 240 250 260 270
360 370 380 390 400 410
pF1KB0 MPSAPVNTTTYVADTESEQADTWDLSERPKEIKVSKMEQKFRMLSQDAPTVKESCKTSSN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MPSAPVNTTTYVADTESEQADTWDLSERPKEIKVSKMEQKFRMLSQDAPTVKESCKTSSN
280 290 300 310 320 330
420 430 440 450 460 470
pF1KB0 NNSMVSNTLAKMRIPNYQLSPTKLPSINKSKDRASQQQQTNSIRNYFQPSTKKRERDEEN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NNSMVSNTLAKMRIPNYQLSPTKLPSINKSKDRASQQQQTNSIRNYFQPSTKKRERDEEN
340 350 360 370 380 390
480 490 500 510 520 530
pF1KB0 QEMSSCKSARIETSCSLLEQTQPATPSLWKNKEQHLSENEPVDTNSDNNLFTDTDLKSIV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QEMSSCKSARIETSCSLLEQTQPATPSLWKNKEQHLSENEPVDTNSDNNLFTDTDLKSIV
400 410 420 430 440 450
540 550 560 570 580 590
pF1KB0 KNSASKSHAAEKLRSNKKREMDDVAIEDEVLEQLFKDTKPELEIDVKVQKQEEDVNVRKR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KNSASKSHAAEKLRSNKKREMDDVAIEDEVLEQLFKDTKPELEIDVKVQKQEEDVNVRKR
460 470 480 490 500 510
600 610 620 630 640 650
pF1KB0 PRMDIETNDTFSDEAVPESSKISQENEIGKKRELKEDSLWSAKEISNNDKLQDDSEMLPK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PRMDIETNDTFSDEAVPESSKISQENEIGKKRELKEDSLWSAKEISNNDKLQDDSEMLPK
520 530 540 550 560 570
660 670 680 690 700 710
pF1KB0 KLLLTEFRSLVIKNSTSRNPSGINDDYGQLKNFKKFKKVTYPGAGKLPHIIGGSDLIAHH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KLLLTEFRSLVIKNSTSRNPSGINDDYGQLKNFKKFKKVTYPGAGKLPHIIGGSDLIAHH
580 590 600 610 620 630
720 730 740 750
pF1KB0 ARKNTELEEWLRQEMEVQNQHAKEESLADDLFRYNPYLKRRR
::::::::::::::::::::::::::::::::::::::::::
NP_001 ARKNTELEEWLRQEMEVQNQHAKEESLADDLFRYNPYLKRRR
640 650 660 670
>>XP_011515348 (OMIM: 251260,602667,609135,613065) PREDI (469 aa)
initn: 3061 init1: 3061 opt: 3061 Z-score: 2570.2 bits: 485.6 E(85289): 2e-136
Smith-Waterman score: 3061; 99.6% identity (100.0% similar) in 466 aa overlap (1-466:1-466)
10 20 30 40 50 60
pF1KB0 MWKLLPAAGPAGGEPYRLLTGVEYVVGRKNCAILIENDQSISRNHAVLTANFSVTNLSQT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MWKLLPAAGPAGGEPYRLLTGVEYVVGRKNCAILIENDQSISRNHAVLTANFSVTNLSQT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB0 DEIPVLTLKDNSKYGTFVNEEKMQNGFSRTLKSGDGITFGVFGSKFRIEYEPLVACSSCL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DEIPVLTLKDNSKYGTFVNEEKMQNGFSRTLKSGDGITFGVFGSKFRIEYEPLVACSSCL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB0 DVSGKTALNQAILQLGGFTVNNWTEECTHLVMVSVKVTIKTICALICGRPIVKPEYFTEF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DVSGKTALNQAILQLGGFTVNNWTEECTHLVMVSVKVTIKTICALICGRPIVKPEYFTEF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB0 LKAVQSKKQPPQIESFYPPLDEPSIGSKNVDLSGRQERKQIFKGKTFIFLNAKQHKKLSS
::::.:::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LKAVESKKQPPQIESFYPPLDEPSIGSKNVDLSGRQERKQIFKGKTFIFLNAKQHKKLSS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB0 AVVFGGGEARLITEENEEEHNFFLAPGTCVVDTGITNSQTLIPDCQKKWIQSIMDMLQRQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AVVFGGGEARLITEENEEEHNFFLAPGTCVVDTGITNSQTLIPDCQKKWIQSIMDMLQRQ
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB0 GLRPIPEAEIGLAVIFMTTKNYCDPQGHPSTGLKTTTPGPSLSQGVSVDEKLMPSAPVNT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GLRPIPEAEIGLAVIFMTTKNYCDPQGHPSTGLKTTTPGPSLSQGVSVDEKLMPSAPVNT
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB0 TTYVADTESEQADTWDLSERPKEIKVSKMEQKFRMLSQDAPTVKESCKTSSNNNSMVSNT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TTYVADTESEQADTWDLSERPKEIKVSKMEQKFRMLSQDAPTVKESCKTSSNNNSMVSNT
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB0 LAKMRIPNYQLSPTKLPSINKSKDRASQQQQTNSIRNYFQPSTKKRERDEENQEMSSCKS
:::::::::::::::::::::::::::::::::::::::::::::.
XP_011 LAKMRIPNYQLSPTKLPSINKSKDRASQQQQTNSIRNYFQPSTKKKGKG
430 440 450 460
490 500 510 520 530 540
pF1KB0 ARIETSCSLLEQTQPATPSLWKNKEQHLSENEPVDTNSDNNLFTDTDLKSIVKNSASKSH
>>XP_016868949 (OMIM: 251260,602667,609135,613065) PREDI (461 aa)
initn: 3000 init1: 3000 opt: 3000 Z-score: 2519.4 bits: 476.2 E(85289): 1.4e-133
Smith-Waterman score: 3000; 100.0% identity (100.0% similar) in 461 aa overlap (294-754:1-461)
270 280 290 300 310 320
pF1KB0 LAPGTCVVDTGITNSQTLIPDCQKKWIQSIMDMLQRQGLRPIPEAEIGLAVIFMTTKNYC
::::::::::::::::::::::::::::::
XP_016 MDMLQRQGLRPIPEAEIGLAVIFMTTKNYC
10 20 30
330 340 350 360 370 380
pF1KB0 DPQGHPSTGLKTTTPGPSLSQGVSVDEKLMPSAPVNTTTYVADTESEQADTWDLSERPKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DPQGHPSTGLKTTTPGPSLSQGVSVDEKLMPSAPVNTTTYVADTESEQADTWDLSERPKE
40 50 60 70 80 90
390 400 410 420 430 440
pF1KB0 IKVSKMEQKFRMLSQDAPTVKESCKTSSNNNSMVSNTLAKMRIPNYQLSPTKLPSINKSK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IKVSKMEQKFRMLSQDAPTVKESCKTSSNNNSMVSNTLAKMRIPNYQLSPTKLPSINKSK
100 110 120 130 140 150
450 460 470 480 490 500
pF1KB0 DRASQQQQTNSIRNYFQPSTKKRERDEENQEMSSCKSARIETSCSLLEQTQPATPSLWKN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DRASQQQQTNSIRNYFQPSTKKRERDEENQEMSSCKSARIETSCSLLEQTQPATPSLWKN
160 170 180 190 200 210
510 520 530 540 550 560
pF1KB0 KEQHLSENEPVDTNSDNNLFTDTDLKSIVKNSASKSHAAEKLRSNKKREMDDVAIEDEVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KEQHLSENEPVDTNSDNNLFTDTDLKSIVKNSASKSHAAEKLRSNKKREMDDVAIEDEVL
220 230 240 250 260 270
570 580 590 600 610 620
pF1KB0 EQLFKDTKPELEIDVKVQKQEEDVNVRKRPRMDIETNDTFSDEAVPESSKISQENEIGKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EQLFKDTKPELEIDVKVQKQEEDVNVRKRPRMDIETNDTFSDEAVPESSKISQENEIGKK
280 290 300 310 320 330
630 640 650 660 670 680
pF1KB0 RELKEDSLWSAKEISNNDKLQDDSEMLPKKLLLTEFRSLVIKNSTSRNPSGINDDYGQLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RELKEDSLWSAKEISNNDKLQDDSEMLPKKLLLTEFRSLVIKNSTSRNPSGINDDYGQLK
340 350 360 370 380 390
690 700 710 720 730 740
pF1KB0 NFKKFKKVTYPGAGKLPHIIGGSDLIAHHARKNTELEEWLRQEMEVQNQHAKEESLADDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NFKKFKKVTYPGAGKLPHIIGGSDLIAHHARKNTELEEWLRQEMEVQNQHAKEESLADDL
400 410 420 430 440 450
750
pF1KB0 FRYNPYLKRRR
:::::::::::
XP_016 FRYNPYLKRRR
460
>>XP_016868951 (OMIM: 251260,602667,609135,613065) PREDI (461 aa)
initn: 3000 init1: 3000 opt: 3000 Z-score: 2519.4 bits: 476.2 E(85289): 1.4e-133
Smith-Waterman score: 3000; 100.0% identity (100.0% similar) in 461 aa overlap (294-754:1-461)
270 280 290 300 310 320
pF1KB0 LAPGTCVVDTGITNSQTLIPDCQKKWIQSIMDMLQRQGLRPIPEAEIGLAVIFMTTKNYC
::::::::::::::::::::::::::::::
XP_016 MDMLQRQGLRPIPEAEIGLAVIFMTTKNYC
10 20 30
330 340 350 360 370 380
pF1KB0 DPQGHPSTGLKTTTPGPSLSQGVSVDEKLMPSAPVNTTTYVADTESEQADTWDLSERPKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DPQGHPSTGLKTTTPGPSLSQGVSVDEKLMPSAPVNTTTYVADTESEQADTWDLSERPKE
40 50 60 70 80 90
390 400 410 420 430 440
pF1KB0 IKVSKMEQKFRMLSQDAPTVKESCKTSSNNNSMVSNTLAKMRIPNYQLSPTKLPSINKSK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IKVSKMEQKFRMLSQDAPTVKESCKTSSNNNSMVSNTLAKMRIPNYQLSPTKLPSINKSK
100 110 120 130 140 150
450 460 470 480 490 500
pF1KB0 DRASQQQQTNSIRNYFQPSTKKRERDEENQEMSSCKSARIETSCSLLEQTQPATPSLWKN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DRASQQQQTNSIRNYFQPSTKKRERDEENQEMSSCKSARIETSCSLLEQTQPATPSLWKN
160 170 180 190 200 210
510 520 530 540 550 560
pF1KB0 KEQHLSENEPVDTNSDNNLFTDTDLKSIVKNSASKSHAAEKLRSNKKREMDDVAIEDEVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KEQHLSENEPVDTNSDNNLFTDTDLKSIVKNSASKSHAAEKLRSNKKREMDDVAIEDEVL
220 230 240 250 260 270
570 580 590 600 610 620
pF1KB0 EQLFKDTKPELEIDVKVQKQEEDVNVRKRPRMDIETNDTFSDEAVPESSKISQENEIGKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EQLFKDTKPELEIDVKVQKQEEDVNVRKRPRMDIETNDTFSDEAVPESSKISQENEIGKK
280 290 300 310 320 330
630 640 650 660 670 680
pF1KB0 RELKEDSLWSAKEISNNDKLQDDSEMLPKKLLLTEFRSLVIKNSTSRNPSGINDDYGQLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RELKEDSLWSAKEISNNDKLQDDSEMLPKKLLLTEFRSLVIKNSTSRNPSGINDDYGQLK
340 350 360 370 380 390
690 700 710 720 730 740
pF1KB0 NFKKFKKVTYPGAGKLPHIIGGSDLIAHHARKNTELEEWLRQEMEVQNQHAKEESLADDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NFKKFKKVTYPGAGKLPHIIGGSDLIAHHARKNTELEEWLRQEMEVQNQHAKEESLADDL
400 410 420 430 440 450
750
pF1KB0 FRYNPYLKRRR
:::::::::::
XP_016 FRYNPYLKRRR
460
>>XP_016868950 (OMIM: 251260,602667,609135,613065) PREDI (461 aa)
initn: 3000 init1: 3000 opt: 3000 Z-score: 2519.4 bits: 476.2 E(85289): 1.4e-133
Smith-Waterman score: 3000; 100.0% identity (100.0% similar) in 461 aa overlap (294-754:1-461)
270 280 290 300 310 320
pF1KB0 LAPGTCVVDTGITNSQTLIPDCQKKWIQSIMDMLQRQGLRPIPEAEIGLAVIFMTTKNYC
::::::::::::::::::::::::::::::
XP_016 MDMLQRQGLRPIPEAEIGLAVIFMTTKNYC
10 20 30
330 340 350 360 370 380
pF1KB0 DPQGHPSTGLKTTTPGPSLSQGVSVDEKLMPSAPVNTTTYVADTESEQADTWDLSERPKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DPQGHPSTGLKTTTPGPSLSQGVSVDEKLMPSAPVNTTTYVADTESEQADTWDLSERPKE
40 50 60 70 80 90
390 400 410 420 430 440
pF1KB0 IKVSKMEQKFRMLSQDAPTVKESCKTSSNNNSMVSNTLAKMRIPNYQLSPTKLPSINKSK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IKVSKMEQKFRMLSQDAPTVKESCKTSSNNNSMVSNTLAKMRIPNYQLSPTKLPSINKSK
100 110 120 130 140 150
450 460 470 480 490 500
pF1KB0 DRASQQQQTNSIRNYFQPSTKKRERDEENQEMSSCKSARIETSCSLLEQTQPATPSLWKN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DRASQQQQTNSIRNYFQPSTKKRERDEENQEMSSCKSARIETSCSLLEQTQPATPSLWKN
160 170 180 190 200 210
510 520 530 540 550 560
pF1KB0 KEQHLSENEPVDTNSDNNLFTDTDLKSIVKNSASKSHAAEKLRSNKKREMDDVAIEDEVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KEQHLSENEPVDTNSDNNLFTDTDLKSIVKNSASKSHAAEKLRSNKKREMDDVAIEDEVL
220 230 240 250 260 270
570 580 590 600 610 620
pF1KB0 EQLFKDTKPELEIDVKVQKQEEDVNVRKRPRMDIETNDTFSDEAVPESSKISQENEIGKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EQLFKDTKPELEIDVKVQKQEEDVNVRKRPRMDIETNDTFSDEAVPESSKISQENEIGKK
280 290 300 310 320 330
630 640 650 660 670 680
pF1KB0 RELKEDSLWSAKEISNNDKLQDDSEMLPKKLLLTEFRSLVIKNSTSRNPSGINDDYGQLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RELKEDSLWSAKEISNNDKLQDDSEMLPKKLLLTEFRSLVIKNSTSRNPSGINDDYGQLK
340 350 360 370 380 390
690 700 710 720 730 740
pF1KB0 NFKKFKKVTYPGAGKLPHIIGGSDLIAHHARKNTELEEWLRQEMEVQNQHAKEESLADDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NFKKFKKVTYPGAGKLPHIIGGSDLIAHHARKNTELEEWLRQEMEVQNQHAKEESLADDL
400 410 420 430 440 450
750
pF1KB0 FRYNPYLKRRR
:::::::::::
XP_016 FRYNPYLKRRR
460
754 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 02:04:31 2016 done: Sat Nov 5 02:04:32 2016
Total Scan time: 9.790 Total Display time: 0.100
Function used was FASTA [36.3.4 Apr, 2011]