Result of FASTA (ccds) for
pF1KA1643
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KA1643, 886 aa
1>>>pF1KA1643 886 - 886 aa - 886 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 8.6430+/-0.000872; mu= 7.3709+/- 0.053
mean_var=179.6608+/-37.311, 0's: 0 Z-trim(113.8): 58 B-trim: 476 in 2/49
Lambda= 0.095686
statistics sampled from 14303 (14361) to 14303 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.756), E-opt: 0.2 (0.441), width: 16
Scan time: 3.900
The best scores are: opt bits E(32554)
CCDS33942.1 ZFYVE28 gene_id:57732|Hs108|chr4 ( 887) 6015 842.8 0
CCDS54708.1 ZFYVE28 gene_id:57732|Hs108|chr4 ( 817) 5545 777.9 0
CCDS54711.1 ZFYVE28 gene_id:57732|Hs108|chr4 ( 857) 4446 626.2 7.6e-179
CCDS54712.1 ZFYVE28 gene_id:57732|Hs108|chr4 ( 287) 1573 229.3 7.6e-60
CCDS54709.1 ZFYVE28 gene_id:57732|Hs108|chr4 ( 163) 1086 162.0 8.2e-40
CCDS54710.1 ZFYVE28 gene_id:57732|Hs108|chr4 ( 172) 958 144.3 1.8e-34
>>CCDS33942.1 ZFYVE28 gene_id:57732|Hs108|chr4 (887 aa)
initn: 6015 init1: 6015 opt: 6015 Z-score: 4494.7 bits: 842.8 E(32554): 0
Smith-Waterman score: 6015; 99.9% identity (99.9% similar) in 886 aa overlap (1-886:2-887)
10 20 30 40 50
pF1KA1 MNRFRKWLYKPKRSDPQLLARFYYADEELNQVAAELDSLDGRKDPQRCTLLVSQFRSCQ
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 MMNRFRKWLYKPKRSDPQLLARFYYADEELNQVAAELDSLDGRKDPQRCTLLVSQFRSCQ
10 20 30 40 50 60
60 70 80 90 100 110
pF1KA1 DNVLNIINQIMDECIPQDRAPRDFCVKFPEEIRHDNLAGQLWFGAECLAAGSIIMNRELE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 DNVLNIINQIMDECIPQDRAPRDFCVKFPEEIRHDNLAGQLWFGAECLAAGSIIMNRELE
70 80 90 100 110 120
120 130 140 150 160 170
pF1KA1 SMAMRPLAKELTRSLEDVRGALRDQALRDLNTYTEKMREALRHFDVLFAEFELSYVSAMV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 SMAMRPLAKELTRSLEDVRGALRDQALRDLNTYTEKMREALRHFDVLFAEFELSYVSAMV
130 140 150 160 170 180
180 190 200 210 220 230
pF1KA1 PVKSPREYYVQQEVIVLFCETVERALDFGYLTQDMIDDYEPALMFSIPRLAIVCGLVVYA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 PVKSPREYYVQQEVIVLFCETVERALDFGYLTQDMIDDYEPALMFSIPRLAIVCGLVVYA
190 200 210 220 230 240
240 250 260 270 280 290
pF1KA1 DGPLNLDRKVEDMSELFRPFHTLLRKIRDLLQTLTEEELHTLERNLCISQDVEFPIRADV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 DGPLNLDRKVEDMSELFRPFHTLLRKIRDLLQTLTEEELHTLERNLCISQDVEFPIRADV
250 260 270 280 290 300
300 310 320 330 340 350
pF1KA1 QGPAALAPALSAPLPPEGPLSAKAKDPDAELACSMQYDDQELEQLSRMVHRAGDEMSSLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 QGPAALAPALSAPLPPEGPLSAKAKDPDAELACSMQYDDQELEQLSRMVHRAGDEMSSLL
310 320 330 340 350 360
360 370 380 390 400 410
pF1KA1 SPPIACQSPAHRPGAEGSPGGEASPGRPRLRSGSDEEERVFFMDDVEGTAEALARPESPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 SPPIACQSPAHRPGAEGSPGGEASPGRPRLRSGSDEEERVFFMDDVEGTAEALARPESPA
370 380 390 400 410 420
420 430 440 450 460 470
pF1KA1 GPFGWAGSTWADPQEKGQGGPGGAAGISLPASEKEEDLSNNNLEAEGTDGASLAGTSSCS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 GPFGWAGSTWADPQEKGQGGPGGAAGISLPASEKEEDLSNNNLEAEGTDGASLAGTSSCS
430 440 450 460 470 480
480 490 500 510 520 530
pF1KA1 CLDSRLHLDGWEVGADDAETAEMIAHRTGGMKLSATVIFNPKSPTSLDSAVATQEAASEP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 CLDSRLHLDGWEVGADDAETAEMIAHRTGGMKLSATVIFNPKSPTSLDSAVATQEAASEP
490 500 510 520 530 540
540 550 560 570 580 590
pF1KA1 VAEGMDGGPHKLSTGATNCLLHSCVCCGSCGDSREDVVERLREKCSPGGVIGASYAAGLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 VAEGMDGGPHKLSTGATNCLLHSCVCCGSCGDSREDVVERLREKCSPGGVIGASYAAGLA
550 560 570 580 590 600
600 610 620 630 640 650
pF1KA1 KASDRAPERQEEAPPPSEDASNGREPKAPTSDKCLPHTSGSQVDTASGLQGEAGVAGQQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 KASDRAPERQEEAPPPSEDASNGREPKAPTSDKCLPHTSGSQVDTASGLQGEAGVAGQQE
610 620 630 640 650 660
660 670 680 690 700 710
pF1KA1 PEARELHAGSPPAHEAPQALSGSSSSTAGSCSSDKMGPEAAPAATHAAPQATREKIRSRF
::::::::::: ::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 PEARELHAGSPSAHEAPQALSGSSSSTAGSCSSDKMGPEAAPAATHAAPQATREKIRSRF
670 680 690 700 710 720
720 730 740 750 760 770
pF1KA1 HGSHDLIHRLFVCISGVADQLQTNYASDLRSILKTLFEVMATKPETDDKEKLRKVTQTLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 HGSHDLIHRLFVCISGVADQLQTNYASDLRSILKTLFEVMATKPETDDKEKLRKVTQTLR
730 740 750 760 770 780
780 790 800 810 820 830
pF1KA1 SAALEDCALCQETLSSSELAAKTRDGDFEDPPEWVPDEACGFCTACKAPFTVIRRKHHCR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 SAALEDCALCQETLSSSELAAKTRDGDFEDPPEWVPDEACGFCTACKAPFTVIRRKHHCR
790 800 810 820 830 840
840 850 860 870 880
pF1KA1 SCGKIFCSRCSSHSAPLPRYGQVKPVRVCTHCYMFHVTPFYSDKAGL
:::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 SCGKIFCSRCSSHSAPLPRYGQVKPVRVCTHCYMFHVTPFYSDKAGL
850 860 870 880
>>CCDS54708.1 ZFYVE28 gene_id:57732|Hs108|chr4 (817 aa)
initn: 5545 init1: 5545 opt: 5545 Z-score: 4144.5 bits: 777.9 E(32554): 0
Smith-Waterman score: 5545; 99.9% identity (99.9% similar) in 817 aa overlap (70-886:1-817)
40 50 60 70 80 90
pF1KA1 DGRKDPQRCTLLVSQFRSCQDNVLNIINQIMDECIPQDRAPRDFCVKFPEEIRHDNLAGQ
::::::::::::::::::::::::::::::
CCDS54 MDECIPQDRAPRDFCVKFPEEIRHDNLAGQ
10 20 30
100 110 120 130 140 150
pF1KA1 LWFGAECLAAGSIIMNRELESMAMRPLAKELTRSLEDVRGALRDQALRDLNTYTEKMREA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 LWFGAECLAAGSIIMNRELESMAMRPLAKELTRSLEDVRGALRDQALRDLNTYTEKMREA
40 50 60 70 80 90
160 170 180 190 200 210
pF1KA1 LRHFDVLFAEFELSYVSAMVPVKSPREYYVQQEVIVLFCETVERALDFGYLTQDMIDDYE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 LRHFDVLFAEFELSYVSAMVPVKSPREYYVQQEVIVLFCETVERALDFGYLTQDMIDDYE
100 110 120 130 140 150
220 230 240 250 260 270
pF1KA1 PALMFSIPRLAIVCGLVVYADGPLNLDRKVEDMSELFRPFHTLLRKIRDLLQTLTEEELH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 PALMFSIPRLAIVCGLVVYADGPLNLDRKVEDMSELFRPFHTLLRKIRDLLQTLTEEELH
160 170 180 190 200 210
280 290 300 310 320 330
pF1KA1 TLERNLCISQDVEFPIRADVQGPAALAPALSAPLPPEGPLSAKAKDPDAELACSMQYDDQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 TLERNLCISQDVEFPIRADVQGPAALAPALSAPLPPEGPLSAKAKDPDAELACSMQYDDQ
220 230 240 250 260 270
340 350 360 370 380 390
pF1KA1 ELEQLSRMVHRAGDEMSSLLSPPIACQSPAHRPGAEGSPGGEASPGRPRLRSGSDEEERV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 ELEQLSRMVHRAGDEMSSLLSPPIACQSPAHRPGAEGSPGGEASPGRPRLRSGSDEEERV
280 290 300 310 320 330
400 410 420 430 440 450
pF1KA1 FFMDDVEGTAEALARPESPAGPFGWAGSTWADPQEKGQGGPGGAAGISLPASEKEEDLSN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 FFMDDVEGTAEALARPESPAGPFGWAGSTWADPQEKGQGGPGGAAGISLPASEKEEDLSN
340 350 360 370 380 390
460 470 480 490 500 510
pF1KA1 NNLEAEGTDGASLAGTSSCSCLDSRLHLDGWEVGADDAETAEMIAHRTGGMKLSATVIFN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 NNLEAEGTDGASLAGTSSCSCLDSRLHLDGWEVGADDAETAEMIAHRTGGMKLSATVIFN
400 410 420 430 440 450
520 530 540 550 560 570
pF1KA1 PKSPTSLDSAVATQEAASEPVAEGMDGGPHKLSTGATNCLLHSCVCCGSCGDSREDVVER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 PKSPTSLDSAVATQEAASEPVAEGMDGGPHKLSTGATNCLLHSCVCCGSCGDSREDVVER
460 470 480 490 500 510
580 590 600 610 620 630
pF1KA1 LREKCSPGGVIGASYAAGLAKASDRAPERQEEAPPPSEDASNGREPKAPTSDKCLPHTSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 LREKCSPGGVIGASYAAGLAKASDRAPERQEEAPPPSEDASNGREPKAPTSDKCLPHTSG
520 530 540 550 560 570
640 650 660 670 680 690
pF1KA1 SQVDTASGLQGEAGVAGQQEPEARELHAGSPPAHEAPQALSGSSSSTAGSCSSDKMGPEA
::::::::::::::::::::::::::::::: ::::::::::::::::::::::::::::
CCDS54 SQVDTASGLQGEAGVAGQQEPEARELHAGSPSAHEAPQALSGSSSSTAGSCSSDKMGPEA
580 590 600 610 620 630
700 710 720 730 740 750
pF1KA1 APAATHAAPQATREKIRSRFHGSHDLIHRLFVCISGVADQLQTNYASDLRSILKTLFEVM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 APAATHAAPQATREKIRSRFHGSHDLIHRLFVCISGVADQLQTNYASDLRSILKTLFEVM
640 650 660 670 680 690
760 770 780 790 800 810
pF1KA1 ATKPETDDKEKLRKVTQTLRSAALEDCALCQETLSSSELAAKTRDGDFEDPPEWVPDEAC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 ATKPETDDKEKLRKVTQTLRSAALEDCALCQETLSSSELAAKTRDGDFEDPPEWVPDEAC
700 710 720 730 740 750
820 830 840 850 860 870
pF1KA1 GFCTACKAPFTVIRRKHHCRSCGKIFCSRCSSHSAPLPRYGQVKPVRVCTHCYMFHVTPF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 GFCTACKAPFTVIRRKHHCRSCGKIFCSRCSSHSAPLPRYGQVKPVRVCTHCYMFHVTPF
760 770 780 790 800 810
880
pF1KA1 YSDKAGL
:::::::
CCDS54 YSDKAGL
>>CCDS54711.1 ZFYVE28 gene_id:57732|Hs108|chr4 (857 aa)
initn: 4446 init1: 4446 opt: 4446 Z-score: 3324.3 bits: 626.2 E(32554): 7.6e-179
Smith-Waterman score: 5733; 96.4% identity (96.4% similar) in 886 aa overlap (1-886:2-857)
10 20 30 40 50
pF1KA1 MNRFRKWLYKPKRSDPQLLARFYYADEELNQVAAELDSLDGRKDPQRCTLLVSQFRSCQ
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 MMNRFRKWLYKPKRSDPQLLARFYYADEELNQVAAELDSLDGRKDPQRCTLLVSQFRSCQ
10 20 30 40 50 60
60 70 80 90 100 110
pF1KA1 DNVLNIINQIMDECIPQDRAPRDFCVKFPEEIRHDNLAGQLWFGAECLAAGSIIMNRELE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 DNVLNIINQIMDECIPQDRAPRDFCVKFPEEIRHDNLAGQLWFGAECLAAGSIIMNRELE
70 80 90 100 110 120
120 130 140 150 160 170
pF1KA1 SMAMRPLAKELTRSLEDVRGALRDQALRDLNTYTEKMREALRHFDVLFAEFELSYVSAMV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 SMAMRPLAKELTRSLEDVRGALRDQALRDLNTYTEKMREALRHFDVLFAEFELSYVSAMV
130 140 150 160 170 180
180 190 200 210 220 230
pF1KA1 PVKSPREYYVQQEVIVLFCETVERALDFGYLTQDMIDDYEPALMFSIPRLAIVCGLVVYA
::::::::::::::::::::::: ::::::
CCDS54 PVKSPREYYVQQEVIVLFCETVES------------------------------GLVVYA
190 200 210
240 250 260 270 280 290
pF1KA1 DGPLNLDRKVEDMSELFRPFHTLLRKIRDLLQTLTEEELHTLERNLCISQDVEFPIRADV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 DGPLNLDRKVEDMSELFRPFHTLLRKIRDLLQTLTEEELHTLERNLCISQDVEFPIRADV
220 230 240 250 260 270
300 310 320 330 340 350
pF1KA1 QGPAALAPALSAPLPPEGPLSAKAKDPDAELACSMQYDDQELEQLSRMVHRAGDEMSSLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 QGPAALAPALSAPLPPEGPLSAKAKDPDAELACSMQYDDQELEQLSRMVHRAGDEMSSLL
280 290 300 310 320 330
360 370 380 390 400 410
pF1KA1 SPPIACQSPAHRPGAEGSPGGEASPGRPRLRSGSDEEERVFFMDDVEGTAEALARPESPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 SPPIACQSPAHRPGAEGSPGGEASPGRPRLRSGSDEEERVFFMDDVEGTAEALARPESPA
340 350 360 370 380 390
420 430 440 450 460 470
pF1KA1 GPFGWAGSTWADPQEKGQGGPGGAAGISLPASEKEEDLSNNNLEAEGTDGASLAGTSSCS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 GPFGWAGSTWADPQEKGQGGPGGAAGISLPASEKEEDLSNNNLEAEGTDGASLAGTSSCS
400 410 420 430 440 450
480 490 500 510 520 530
pF1KA1 CLDSRLHLDGWEVGADDAETAEMIAHRTGGMKLSATVIFNPKSPTSLDSAVATQEAASEP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 CLDSRLHLDGWEVGADDAETAEMIAHRTGGMKLSATVIFNPKSPTSLDSAVATQEAASEP
460 470 480 490 500 510
540 550 560 570 580 590
pF1KA1 VAEGMDGGPHKLSTGATNCLLHSCVCCGSCGDSREDVVERLREKCSPGGVIGASYAAGLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 VAEGMDGGPHKLSTGATNCLLHSCVCCGSCGDSREDVVERLREKCSPGGVIGASYAAGLA
520 530 540 550 560 570
600 610 620 630 640 650
pF1KA1 KASDRAPERQEEAPPPSEDASNGREPKAPTSDKCLPHTSGSQVDTASGLQGEAGVAGQQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 KASDRAPERQEEAPPPSEDASNGREPKAPTSDKCLPHTSGSQVDTASGLQGEAGVAGQQE
580 590 600 610 620 630
660 670 680 690 700 710
pF1KA1 PEARELHAGSPPAHEAPQALSGSSSSTAGSCSSDKMGPEAAPAATHAAPQATREKIRSRF
::::::::::: ::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 PEARELHAGSPSAHEAPQALSGSSSSTAGSCSSDKMGPEAAPAATHAAPQATREKIRSRF
640 650 660 670 680 690
720 730 740 750 760 770
pF1KA1 HGSHDLIHRLFVCISGVADQLQTNYASDLRSILKTLFEVMATKPETDDKEKLRKVTQTLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 HGSHDLIHRLFVCISGVADQLQTNYASDLRSILKTLFEVMATKPETDDKEKLRKVTQTLR
700 710 720 730 740 750
780 790 800 810 820 830
pF1KA1 SAALEDCALCQETLSSSELAAKTRDGDFEDPPEWVPDEACGFCTACKAPFTVIRRKHHCR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 SAALEDCALCQETLSSSELAAKTRDGDFEDPPEWVPDEACGFCTACKAPFTVIRRKHHCR
760 770 780 790 800 810
840 850 860 870 880
pF1KA1 SCGKIFCSRCSSHSAPLPRYGQVKPVRVCTHCYMFHVTPFYSDKAGL
:::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 SCGKIFCSRCSSHSAPLPRYGQVKPVRVCTHCYMFHVTPFYSDKAGL
820 830 840 850
>>CCDS54712.1 ZFYVE28 gene_id:57732|Hs108|chr4 (287 aa)
initn: 1597 init1: 1573 opt: 1573 Z-score: 1187.9 bits: 229.3 E(32554): 7.6e-60
Smith-Waterman score: 1573; 99.2% identity (99.6% similar) in 236 aa overlap (1-236:2-237)
10 20 30 40 50
pF1KA1 MNRFRKWLYKPKRSDPQLLARFYYADEELNQVAAELDSLDGRKDPQRCTLLVSQFRSCQ
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 MMNRFRKWLYKPKRSDPQLLARFYYADEELNQVAAELDSLDGRKDPQRCTLLVSQFRSCQ
10 20 30 40 50 60
60 70 80 90 100 110
pF1KA1 DNVLNIINQIMDECIPQDRAPRDFCVKFPEEIRHDNLAGQLWFGAECLAAGSIIMNRELE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 DNVLNIINQIMDECIPQDRAPRDFCVKFPEEIRHDNLAGQLWFGAECLAAGSIIMNRELE
70 80 90 100 110 120
120 130 140 150 160 170
pF1KA1 SMAMRPLAKELTRSLEDVRGALRDQALRDLNTYTEKMREALRHFDVLFAEFELSYVSAMV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 SMAMRPLAKELTRSLEDVRGALRDQALRDLNTYTEKMREALRHFDVLFAEFELSYVSAMV
130 140 150 160 170 180
180 190 200 210 220 230
pF1KA1 PVKSPREYYVQQEVIVLFCETVERALDFGYLTQDMIDDYEPALMFSIPRLAIVCGLVVYA
:::::::::::::::::::::::::::::::::::::::::::::::::::::: :.
CCDS54 PVKSPREYYVQQEVIVLFCETVERALDFGYLTQDMIDDYEPALMFSIPRLAIVCPLLPAH
190 200 210 220 230 240
240 250 260 270 280 290
pF1KA1 DGPLNLDRKVEDMSELFRPFHTLLRKIRDLLQTLTEEELHTLERNLCISQDVEFPIRADV
CCDS54 PRTRAGATAHVACRMVAGSSSGALTHPPVSKQGVISALLRPLPELPP
250 260 270 280
>>CCDS54709.1 ZFYVE28 gene_id:57732|Hs108|chr4 (163 aa)
initn: 1086 init1: 1086 opt: 1086 Z-score: 828.3 bits: 162.0 E(32554): 8.2e-40
Smith-Waterman score: 1086; 100.0% identity (100.0% similar) in 163 aa overlap (70-232:1-163)
40 50 60 70 80 90
pF1KA1 DGRKDPQRCTLLVSQFRSCQDNVLNIINQIMDECIPQDRAPRDFCVKFPEEIRHDNLAGQ
::::::::::::::::::::::::::::::
CCDS54 MDECIPQDRAPRDFCVKFPEEIRHDNLAGQ
10 20 30
100 110 120 130 140 150
pF1KA1 LWFGAECLAAGSIIMNRELESMAMRPLAKELTRSLEDVRGALRDQALRDLNTYTEKMREA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 LWFGAECLAAGSIIMNRELESMAMRPLAKELTRSLEDVRGALRDQALRDLNTYTEKMREA
40 50 60 70 80 90
160 170 180 190 200 210
pF1KA1 LRHFDVLFAEFELSYVSAMVPVKSPREYYVQQEVIVLFCETVERALDFGYLTQDMIDDYE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 LRHFDVLFAEFELSYVSAMVPVKSPREYYVQQEVIVLFCETVERALDFGYLTQDMIDDYE
100 110 120 130 140 150
220 230 240 250 260 270
pF1KA1 PALMFSIPRLAIVCGLVVYADGPLNLDRKVEDMSELFRPFHTLLRKIRDLLQTLTEEELH
:::::::::::::
CCDS54 PALMFSIPRLAIV
160
>>CCDS54710.1 ZFYVE28 gene_id:57732|Hs108|chr4 (172 aa)
initn: 958 init1: 958 opt: 958 Z-score: 732.4 bits: 144.3 E(32554): 1.8e-34
Smith-Waterman score: 958; 99.3% identity (100.0% similar) in 145 aa overlap (59-203:13-157)
30 40 50 60 70 80
pF1KA1 LNQVAAELDSLDGRKDPQRCTLLVSQFRSCQDNVLNIINQIMDECIPQDRAPRDFCVKFP
.:::::::::::::::::::::::::::::
CCDS54 MMNRFRKWLYKPKDNVLNIINQIMDECIPQDRAPRDFCVKFP
10 20 30 40
90 100 110 120 130 140
pF1KA1 EEIRHDNLAGQLWFGAECLAAGSIIMNRELESMAMRPLAKELTRSLEDVRGALRDQALRD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 EEIRHDNLAGQLWFGAECLAAGSIIMNRELESMAMRPLAKELTRSLEDVRGALRDQALRD
50 60 70 80 90 100
150 160 170 180 190 200
pF1KA1 LNTYTEKMREALRHFDVLFAEFELSYVSAMVPVKSPREYYVQQEVIVLFCETVERALDFG
:::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 LNTYTEKMREALRHFDVLFAEFELSYVSAMVPVKSPREYYVQQEVIVLFCETVERNGKGV
110 120 130 140 150 160
210 220 230 240 250 260
pF1KA1 YLTQDMIDDYEPALMFSIPRLAIVCGLVVYADGPLNLDRKVEDMSELFRPFHTLLRKIRD
CCDS54 LKFMWNCNGP
170
886 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 06:53:17 2016 done: Sat Nov 5 06:53:17 2016
Total Scan time: 3.900 Total Display time: 0.060
Function used was FASTA [36.3.4 Apr, 2011]