Result of FASTA (omim) for
pF1KA1408
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KA1408, 1272 aa
1>>>pF1KA1408 1272 - 1272 aa - 1272 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 12.8172+/-0.000621; mu= -12.8581+/- 0.039
mean_var=507.0263+/-102.678, 0's: 0 Z-trim(119.3): 10 B-trim: 1105 in 1/55
Lambda= 0.056959
statistics sampled from 33235 (33245) to 33235 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.697), E-opt: 0.2 (0.39), width: 16
Scan time: 18.520
The best scores are: opt bits E(85289)
NP_056357 (OMIM: 605529) regulator of nonsense tra (1272) 8439 709.8 2.9e-203
NP_542166 (OMIM: 605529) regulator of nonsense tra (1272) 8439 709.8 2.9e-203
XP_016871523 (OMIM: 605529) PREDICTED: regulator o ( 869) 5825 494.9 1e-138
XP_011517751 (OMIM: 605529) PREDICTED: regulator o ( 718) 4517 387.3 2e-106
>>NP_056357 (OMIM: 605529) regulator of nonsense transcr (1272 aa)
initn: 8439 init1: 8439 opt: 8439 Z-score: 3770.2 bits: 709.8 E(85289): 2.9e-203
Smith-Waterman score: 8439; 100.0% identity (100.0% similar) in 1272 aa overlap (1-1272:1-1272)
10 20 30 40 50 60
pF1KA1 MPAERKKPASMEEKDSLPNNKEKDCSERRTVSSKERPKDDIKLTAKKEVSKAPEDKKKRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 MPAERKKPASMEEKDSLPNNKEKDCSERRTVSSKERPKDDIKLTAKKEVSKAPEDKKKRL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA1 EDDKRKKEDKERKKKDEEKVKAEEESKKKEEEEKKKHQEEERKKQEEQAKRQQEEEAAAQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 EDDKRKKEDKERKKKDEEKVKAEEESKKKEEEEKKKHQEEERKKQEEQAKRQQEEEAAAQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA1 MKEKEESIQLHQEAWERHHLRKELRSKNQNAPDSRPEENFFSRLDSSLKKNTAFVKKLKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 MKEKEESIQLHQEAWERHHLRKELRSKNQNAPDSRPEENFFSRLDSSLKKNTAFVKKLKT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA1 ITEQQRDSLSHDFNGLNLSKYIAEAVASIVEAKLKISDVNCAVHLCSLFHQRYADFAPSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 ITEQQRDSLSHDFNGLNLSKYIAEAVASIVEAKLKISDVNCAVHLCSLFHQRYADFAPSL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA1 LQVWKKHFEARKEEKTPNITKLRTDLRFIAELTIVGIFTDKEGLSLIYEQLKNIINADRE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 LQVWKKHFEARKEEKTPNITKLRTDLRFIAELTIVGIFTDKEGLSLIYEQLKNIINADRE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA1 SHTHVSVVISFCRHCGDDIAGLVPRKVKSAAEKFNLSFPPSEIISPEKQQPFQNLLKEYF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 SHTHVSVVISFCRHCGDDIAGLVPRKVKSAAEKFNLSFPPSEIISPEKQQPFQNLLKEYF
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA1 TSLTKHLKRDHRELQNTERQNRRILHSKGELSEDRHKQYEEFAMSYQKLLANSQSLADLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 TSLTKHLKRDHRELQNTERQNRRILHSKGELSEDRHKQYEEFAMSYQKLLANSQSLADLL
370 380 390 400 410 420
430 440 450 460 470 480
pF1KA1 DENMPDLPQDKPTPEEHGPGIDIFTPGKPGEYDLEGGIWEDEDARNFYENLIDLKAFVPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 DENMPDLPQDKPTPEEHGPGIDIFTPGKPGEYDLEGGIWEDEDARNFYENLIDLKAFVPA
430 440 450 460 470 480
490 500 510 520 530 540
pF1KA1 ILFKDNEKSCQNKESNKDDTKEAKESKENKEVSSPDDLELELENLEINDDTLELEGGDEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 ILFKDNEKSCQNKESNKDDTKEAKESKENKEVSSPDDLELELENLEINDDTLELEGGDEA
490 500 510 520 530 540
550 560 570 580 590 600
pF1KA1 EDLTKKLLDEQEQEDEEASTGSHLKLIVDAFLQQLPNCVNRDLIDKAAMDFCMNMNTKAN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 EDLTKKLLDEQEQEDEEASTGSHLKLIVDAFLQQLPNCVNRDLIDKAAMDFCMNMNTKAN
550 560 570 580 590 600
610 620 630 640 650 660
pF1KA1 RKKLVRALFIVPRQRLDLLPFYARLVATLHPCMSDVAEDLCSMLRGDFRFHVRKKDQINI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 RKKLVRALFIVPRQRLDLLPFYARLVATLHPCMSDVAEDLCSMLRGDFRFHVRKKDQINI
610 620 630 640 650 660
670 680 690 700 710 720
pF1KA1 ETKNKTVRFIGELTKFKMFTKNDTLHCLKMLLSDFSHHHIEMACTLLETCGRFLFRSPES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 ETKNKTVRFIGELTKFKMFTKNDTLHCLKMLLSDFSHHHIEMACTLLETCGRFLFRSPES
670 680 690 700 710 720
730 740 750 760 770 780
pF1KA1 HLRTSVLLEQMMRKKQAMHLDARYVTMVENAYYYCNPPPAEKTVKKKRPPLQEYVRKLLY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 HLRTSVLLEQMMRKKQAMHLDARYVTMVENAYYYCNPPPAEKTVKKKRPPLQEYVRKLLY
730 740 750 760 770 780
790 800 810 820 830 840
pF1KA1 KDLSKVTTEKVLRQMRKLPWQDQEVKDYVICCMINIWNVKYNSIHCVANLLAGLVLYQED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 KDLSKVTTEKVLRQMRKLPWQDQEVKDYVICCMINIWNVKYNSIHCVANLLAGLVLYQED
790 800 810 820 830 840
850 860 870 880 890 900
pF1KA1 VGIHVVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGELYNYRMVESAVIFRTLYSFTSFG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 VGIHVVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGELYNYRMVESAVIFRTLYSFTSFG
850 860 870 880 890 900
910 920 930 940 950 960
pF1KA1 VNPDGSPSSLDPPEHLFRIRLVCTILDTCGQYFDRGSSKRKLDCFLVYFQRYVWWKKSLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 VNPDGSPSSLDPPEHLFRIRLVCTILDTCGQYFDRGSSKRKLDCFLVYFQRYVWWKKSLE
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KA1 VWTKDHPFPIDIDYMISDTLELLRPKIKLCNSLEESIRQVQDLEREFLIKLGLVNDKDSK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 VWTKDHPFPIDIDYMISDTLELLRPKIKLCNSLEESIRQVQDLEREFLIKLGLVNDKDSK
970 980 990 1000 1010 1020
1030 1040 1050 1060 1070 1080
pF1KA1 DSMTEGENLEEDEEEEEGGAETEEQSGNESEVNEPEEEEGSDNDDDEGEEEEEENTDYLT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 DSMTEGENLEEDEEEEEGGAETEEQSGNESEVNEPEEEEGSDNDDDEGEEEEEENTDYLT
1030 1040 1050 1060 1070 1080
1090 1100 1110 1120 1130 1140
pF1KA1 DSNKENETDEENTEVMIKGGGLKHVPCVEDEDFIQALDKMMLENLQQRSGESVKVHQLDV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 DSNKENETDEENTEVMIKGGGLKHVPCVEDEDFIQALDKMMLENLQQRSGESVKVHQLDV
1090 1100 1110 1120 1130 1140
1150 1160 1170 1180 1190 1200
pF1KA1 AIPLHLKSQLRKGPPLGGGEGEAESADTMPFVMLTRKGNKQQFKILNVPMSSQLAANHWN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 AIPLHLKSQLRKGPPLGGGEGEAESADTMPFVMLTRKGNKQQFKILNVPMSSQLAANHWN
1150 1160 1170 1180 1190 1200
1210 1220 1230 1240 1250 1260
pF1KA1 QQQAEQEERMRMKKLTLDINERQEQEDYQEMLQSLAQRPAPANTNRERRPRYQHPKGAPN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 QQQAEQEERMRMKKLTLDINERQEQEDYQEMLQSLAQRPAPANTNRERRPRYQHPKGAPN
1210 1220 1230 1240 1250 1260
1270
pF1KA1 ADLIFKTGGRRR
::::::::::::
NP_056 ADLIFKTGGRRR
1270
>>NP_542166 (OMIM: 605529) regulator of nonsense transcr (1272 aa)
initn: 8439 init1: 8439 opt: 8439 Z-score: 3770.2 bits: 709.8 E(85289): 2.9e-203
Smith-Waterman score: 8439; 100.0% identity (100.0% similar) in 1272 aa overlap (1-1272:1-1272)
10 20 30 40 50 60
pF1KA1 MPAERKKPASMEEKDSLPNNKEKDCSERRTVSSKERPKDDIKLTAKKEVSKAPEDKKKRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_542 MPAERKKPASMEEKDSLPNNKEKDCSERRTVSSKERPKDDIKLTAKKEVSKAPEDKKKRL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA1 EDDKRKKEDKERKKKDEEKVKAEEESKKKEEEEKKKHQEEERKKQEEQAKRQQEEEAAAQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_542 EDDKRKKEDKERKKKDEEKVKAEEESKKKEEEEKKKHQEEERKKQEEQAKRQQEEEAAAQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA1 MKEKEESIQLHQEAWERHHLRKELRSKNQNAPDSRPEENFFSRLDSSLKKNTAFVKKLKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_542 MKEKEESIQLHQEAWERHHLRKELRSKNQNAPDSRPEENFFSRLDSSLKKNTAFVKKLKT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA1 ITEQQRDSLSHDFNGLNLSKYIAEAVASIVEAKLKISDVNCAVHLCSLFHQRYADFAPSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_542 ITEQQRDSLSHDFNGLNLSKYIAEAVASIVEAKLKISDVNCAVHLCSLFHQRYADFAPSL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA1 LQVWKKHFEARKEEKTPNITKLRTDLRFIAELTIVGIFTDKEGLSLIYEQLKNIINADRE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_542 LQVWKKHFEARKEEKTPNITKLRTDLRFIAELTIVGIFTDKEGLSLIYEQLKNIINADRE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA1 SHTHVSVVISFCRHCGDDIAGLVPRKVKSAAEKFNLSFPPSEIISPEKQQPFQNLLKEYF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_542 SHTHVSVVISFCRHCGDDIAGLVPRKVKSAAEKFNLSFPPSEIISPEKQQPFQNLLKEYF
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA1 TSLTKHLKRDHRELQNTERQNRRILHSKGELSEDRHKQYEEFAMSYQKLLANSQSLADLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_542 TSLTKHLKRDHRELQNTERQNRRILHSKGELSEDRHKQYEEFAMSYQKLLANSQSLADLL
370 380 390 400 410 420
430 440 450 460 470 480
pF1KA1 DENMPDLPQDKPTPEEHGPGIDIFTPGKPGEYDLEGGIWEDEDARNFYENLIDLKAFVPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_542 DENMPDLPQDKPTPEEHGPGIDIFTPGKPGEYDLEGGIWEDEDARNFYENLIDLKAFVPA
430 440 450 460 470 480
490 500 510 520 530 540
pF1KA1 ILFKDNEKSCQNKESNKDDTKEAKESKENKEVSSPDDLELELENLEINDDTLELEGGDEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_542 ILFKDNEKSCQNKESNKDDTKEAKESKENKEVSSPDDLELELENLEINDDTLELEGGDEA
490 500 510 520 530 540
550 560 570 580 590 600
pF1KA1 EDLTKKLLDEQEQEDEEASTGSHLKLIVDAFLQQLPNCVNRDLIDKAAMDFCMNMNTKAN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_542 EDLTKKLLDEQEQEDEEASTGSHLKLIVDAFLQQLPNCVNRDLIDKAAMDFCMNMNTKAN
550 560 570 580 590 600
610 620 630 640 650 660
pF1KA1 RKKLVRALFIVPRQRLDLLPFYARLVATLHPCMSDVAEDLCSMLRGDFRFHVRKKDQINI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_542 RKKLVRALFIVPRQRLDLLPFYARLVATLHPCMSDVAEDLCSMLRGDFRFHVRKKDQINI
610 620 630 640 650 660
670 680 690 700 710 720
pF1KA1 ETKNKTVRFIGELTKFKMFTKNDTLHCLKMLLSDFSHHHIEMACTLLETCGRFLFRSPES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_542 ETKNKTVRFIGELTKFKMFTKNDTLHCLKMLLSDFSHHHIEMACTLLETCGRFLFRSPES
670 680 690 700 710 720
730 740 750 760 770 780
pF1KA1 HLRTSVLLEQMMRKKQAMHLDARYVTMVENAYYYCNPPPAEKTVKKKRPPLQEYVRKLLY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_542 HLRTSVLLEQMMRKKQAMHLDARYVTMVENAYYYCNPPPAEKTVKKKRPPLQEYVRKLLY
730 740 750 760 770 780
790 800 810 820 830 840
pF1KA1 KDLSKVTTEKVLRQMRKLPWQDQEVKDYVICCMINIWNVKYNSIHCVANLLAGLVLYQED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_542 KDLSKVTTEKVLRQMRKLPWQDQEVKDYVICCMINIWNVKYNSIHCVANLLAGLVLYQED
790 800 810 820 830 840
850 860 870 880 890 900
pF1KA1 VGIHVVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGELYNYRMVESAVIFRTLYSFTSFG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_542 VGIHVVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGELYNYRMVESAVIFRTLYSFTSFG
850 860 870 880 890 900
910 920 930 940 950 960
pF1KA1 VNPDGSPSSLDPPEHLFRIRLVCTILDTCGQYFDRGSSKRKLDCFLVYFQRYVWWKKSLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_542 VNPDGSPSSLDPPEHLFRIRLVCTILDTCGQYFDRGSSKRKLDCFLVYFQRYVWWKKSLE
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KA1 VWTKDHPFPIDIDYMISDTLELLRPKIKLCNSLEESIRQVQDLEREFLIKLGLVNDKDSK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_542 VWTKDHPFPIDIDYMISDTLELLRPKIKLCNSLEESIRQVQDLEREFLIKLGLVNDKDSK
970 980 990 1000 1010 1020
1030 1040 1050 1060 1070 1080
pF1KA1 DSMTEGENLEEDEEEEEGGAETEEQSGNESEVNEPEEEEGSDNDDDEGEEEEEENTDYLT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_542 DSMTEGENLEEDEEEEEGGAETEEQSGNESEVNEPEEEEGSDNDDDEGEEEEEENTDYLT
1030 1040 1050 1060 1070 1080
1090 1100 1110 1120 1130 1140
pF1KA1 DSNKENETDEENTEVMIKGGGLKHVPCVEDEDFIQALDKMMLENLQQRSGESVKVHQLDV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_542 DSNKENETDEENTEVMIKGGGLKHVPCVEDEDFIQALDKMMLENLQQRSGESVKVHQLDV
1090 1100 1110 1120 1130 1140
1150 1160 1170 1180 1190 1200
pF1KA1 AIPLHLKSQLRKGPPLGGGEGEAESADTMPFVMLTRKGNKQQFKILNVPMSSQLAANHWN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_542 AIPLHLKSQLRKGPPLGGGEGEAESADTMPFVMLTRKGNKQQFKILNVPMSSQLAANHWN
1150 1160 1170 1180 1190 1200
1210 1220 1230 1240 1250 1260
pF1KA1 QQQAEQEERMRMKKLTLDINERQEQEDYQEMLQSLAQRPAPANTNRERRPRYQHPKGAPN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_542 QQQAEQEERMRMKKLTLDINERQEQEDYQEMLQSLAQRPAPANTNRERRPRYQHPKGAPN
1210 1220 1230 1240 1250 1260
1270
pF1KA1 ADLIFKTGGRRR
::::::::::::
NP_542 ADLIFKTGGRRR
1270
>>XP_016871523 (OMIM: 605529) PREDICTED: regulator of no (869 aa)
initn: 5825 init1: 5825 opt: 5825 Z-score: 2611.4 bits: 494.9 E(85289): 1e-138
Smith-Waterman score: 5825; 100.0% identity (100.0% similar) in 869 aa overlap (404-1272:1-869)
380 390 400 410 420 430
pF1KA1 LQNTERQNRRILHSKGELSEDRHKQYEEFAMSYQKLLANSQSLADLLDENMPDLPQDKPT
::::::::::::::::::::::::::::::
XP_016 MSYQKLLANSQSLADLLDENMPDLPQDKPT
10 20 30
440 450 460 470 480 490
pF1KA1 PEEHGPGIDIFTPGKPGEYDLEGGIWEDEDARNFYENLIDLKAFVPAILFKDNEKSCQNK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PEEHGPGIDIFTPGKPGEYDLEGGIWEDEDARNFYENLIDLKAFVPAILFKDNEKSCQNK
40 50 60 70 80 90
500 510 520 530 540 550
pF1KA1 ESNKDDTKEAKESKENKEVSSPDDLELELENLEINDDTLELEGGDEAEDLTKKLLDEQEQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ESNKDDTKEAKESKENKEVSSPDDLELELENLEINDDTLELEGGDEAEDLTKKLLDEQEQ
100 110 120 130 140 150
560 570 580 590 600 610
pF1KA1 EDEEASTGSHLKLIVDAFLQQLPNCVNRDLIDKAAMDFCMNMNTKANRKKLVRALFIVPR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EDEEASTGSHLKLIVDAFLQQLPNCVNRDLIDKAAMDFCMNMNTKANRKKLVRALFIVPR
160 170 180 190 200 210
620 630 640 650 660 670
pF1KA1 QRLDLLPFYARLVATLHPCMSDVAEDLCSMLRGDFRFHVRKKDQINIETKNKTVRFIGEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QRLDLLPFYARLVATLHPCMSDVAEDLCSMLRGDFRFHVRKKDQINIETKNKTVRFIGEL
220 230 240 250 260 270
680 690 700 710 720 730
pF1KA1 TKFKMFTKNDTLHCLKMLLSDFSHHHIEMACTLLETCGRFLFRSPESHLRTSVLLEQMMR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TKFKMFTKNDTLHCLKMLLSDFSHHHIEMACTLLETCGRFLFRSPESHLRTSVLLEQMMR
280 290 300 310 320 330
740 750 760 770 780 790
pF1KA1 KKQAMHLDARYVTMVENAYYYCNPPPAEKTVKKKRPPLQEYVRKLLYKDLSKVTTEKVLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KKQAMHLDARYVTMVENAYYYCNPPPAEKTVKKKRPPLQEYVRKLLYKDLSKVTTEKVLR
340 350 360 370 380 390
800 810 820 830 840 850
pF1KA1 QMRKLPWQDQEVKDYVICCMINIWNVKYNSIHCVANLLAGLVLYQEDVGIHVVDGVLEDI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QMRKLPWQDQEVKDYVICCMINIWNVKYNSIHCVANLLAGLVLYQEDVGIHVVDGVLEDI
400 410 420 430 440 450
860 870 880 890 900 910
pF1KA1 RLGMEVNQPKFNQRRISSAKFLGELYNYRMVESAVIFRTLYSFTSFGVNPDGSPSSLDPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RLGMEVNQPKFNQRRISSAKFLGELYNYRMVESAVIFRTLYSFTSFGVNPDGSPSSLDPP
460 470 480 490 500 510
920 930 940 950 960 970
pF1KA1 EHLFRIRLVCTILDTCGQYFDRGSSKRKLDCFLVYFQRYVWWKKSLEVWTKDHPFPIDID
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EHLFRIRLVCTILDTCGQYFDRGSSKRKLDCFLVYFQRYVWWKKSLEVWTKDHPFPIDID
520 530 540 550 560 570
980 990 1000 1010 1020 1030
pF1KA1 YMISDTLELLRPKIKLCNSLEESIRQVQDLEREFLIKLGLVNDKDSKDSMTEGENLEEDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YMISDTLELLRPKIKLCNSLEESIRQVQDLEREFLIKLGLVNDKDSKDSMTEGENLEEDE
580 590 600 610 620 630
1040 1050 1060 1070 1080 1090
pF1KA1 EEEEGGAETEEQSGNESEVNEPEEEEGSDNDDDEGEEEEEENTDYLTDSNKENETDEENT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EEEEGGAETEEQSGNESEVNEPEEEEGSDNDDDEGEEEEEENTDYLTDSNKENETDEENT
640 650 660 670 680 690
1100 1110 1120 1130 1140 1150
pF1KA1 EVMIKGGGLKHVPCVEDEDFIQALDKMMLENLQQRSGESVKVHQLDVAIPLHLKSQLRKG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EVMIKGGGLKHVPCVEDEDFIQALDKMMLENLQQRSGESVKVHQLDVAIPLHLKSQLRKG
700 710 720 730 740 750
1160 1170 1180 1190 1200 1210
pF1KA1 PPLGGGEGEAESADTMPFVMLTRKGNKQQFKILNVPMSSQLAANHWNQQQAEQEERMRMK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PPLGGGEGEAESADTMPFVMLTRKGNKQQFKILNVPMSSQLAANHWNQQQAEQEERMRMK
760 770 780 790 800 810
1220 1230 1240 1250 1260 1270
pF1KA1 KLTLDINERQEQEDYQEMLQSLAQRPAPANTNRERRPRYQHPKGAPNADLIFKTGGRRR
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KLTLDINERQEQEDYQEMLQSLAQRPAPANTNRERRPRYQHPKGAPNADLIFKTGGRRR
820 830 840 850 860
>>XP_011517751 (OMIM: 605529) PREDICTED: regulator of no (718 aa)
initn: 4517 init1: 4517 opt: 4517 Z-score: 2031.6 bits: 387.3 E(85289): 2e-106
Smith-Waterman score: 4517; 100.0% identity (100.0% similar) in 689 aa overlap (1-689:1-689)
10 20 30 40 50 60
pF1KA1 MPAERKKPASMEEKDSLPNNKEKDCSERRTVSSKERPKDDIKLTAKKEVSKAPEDKKKRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MPAERKKPASMEEKDSLPNNKEKDCSERRTVSSKERPKDDIKLTAKKEVSKAPEDKKKRL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA1 EDDKRKKEDKERKKKDEEKVKAEEESKKKEEEEKKKHQEEERKKQEEQAKRQQEEEAAAQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EDDKRKKEDKERKKKDEEKVKAEEESKKKEEEEKKKHQEEERKKQEEQAKRQQEEEAAAQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA1 MKEKEESIQLHQEAWERHHLRKELRSKNQNAPDSRPEENFFSRLDSSLKKNTAFVKKLKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MKEKEESIQLHQEAWERHHLRKELRSKNQNAPDSRPEENFFSRLDSSLKKNTAFVKKLKT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA1 ITEQQRDSLSHDFNGLNLSKYIAEAVASIVEAKLKISDVNCAVHLCSLFHQRYADFAPSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ITEQQRDSLSHDFNGLNLSKYIAEAVASIVEAKLKISDVNCAVHLCSLFHQRYADFAPSL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA1 LQVWKKHFEARKEEKTPNITKLRTDLRFIAELTIVGIFTDKEGLSLIYEQLKNIINADRE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LQVWKKHFEARKEEKTPNITKLRTDLRFIAELTIVGIFTDKEGLSLIYEQLKNIINADRE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA1 SHTHVSVVISFCRHCGDDIAGLVPRKVKSAAEKFNLSFPPSEIISPEKQQPFQNLLKEYF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SHTHVSVVISFCRHCGDDIAGLVPRKVKSAAEKFNLSFPPSEIISPEKQQPFQNLLKEYF
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA1 TSLTKHLKRDHRELQNTERQNRRILHSKGELSEDRHKQYEEFAMSYQKLLANSQSLADLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TSLTKHLKRDHRELQNTERQNRRILHSKGELSEDRHKQYEEFAMSYQKLLANSQSLADLL
370 380 390 400 410 420
430 440 450 460 470 480
pF1KA1 DENMPDLPQDKPTPEEHGPGIDIFTPGKPGEYDLEGGIWEDEDARNFYENLIDLKAFVPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DENMPDLPQDKPTPEEHGPGIDIFTPGKPGEYDLEGGIWEDEDARNFYENLIDLKAFVPA
430 440 450 460 470 480
490 500 510 520 530 540
pF1KA1 ILFKDNEKSCQNKESNKDDTKEAKESKENKEVSSPDDLELELENLEINDDTLELEGGDEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ILFKDNEKSCQNKESNKDDTKEAKESKENKEVSSPDDLELELENLEINDDTLELEGGDEA
490 500 510 520 530 540
550 560 570 580 590 600
pF1KA1 EDLTKKLLDEQEQEDEEASTGSHLKLIVDAFLQQLPNCVNRDLIDKAAMDFCMNMNTKAN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EDLTKKLLDEQEQEDEEASTGSHLKLIVDAFLQQLPNCVNRDLIDKAAMDFCMNMNTKAN
550 560 570 580 590 600
610 620 630 640 650 660
pF1KA1 RKKLVRALFIVPRQRLDLLPFYARLVATLHPCMSDVAEDLCSMLRGDFRFHVRKKDQINI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RKKLVRALFIVPRQRLDLLPFYARLVATLHPCMSDVAEDLCSMLRGDFRFHVRKKDQINI
610 620 630 640 650 660
670 680 690 700 710 720
pF1KA1 ETKNKTVRFIGELTKFKMFTKNDTLHCLKMLLSDFSHHHIEMACTLLETCGRFLFRSPES
:::::::::::::::::::::::::::::
XP_011 ETKNKTVRFIGELTKFKMFTKNDTLHCLKKIGNPKHFWSQAFQIRDTSPVARNGRQLG
670 680 690 700 710
1272 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 01:33:35 2016 done: Fri Nov 4 01:33:38 2016
Total Scan time: 18.520 Total Display time: 0.150
Function used was FASTA [36.3.4 Apr, 2011]