Result of FASTA (omim) for
pF1KA0983
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KA0983, 683 aa
1>>>pF1KA0983 683 - 683 aa - 683 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.4284+/-0.000407; mu= 15.2740+/- 0.025
mean_var=121.5232+/-24.300, 0's: 0 Z-trim(115.1): 34 B-trim: 0 in 0/56
Lambda= 0.116344
statistics sampled from 25359 (25390) to 25359 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.653), E-opt: 0.2 (0.298), width: 16
Scan time: 11.090
The best scores are: opt bits E(85289)
NP_003669 (OMIM: 612733) THO complex subunit 5 hom ( 683) 4559 777.0 0
NP_001002879 (OMIM: 612733) THO complex subunit 5 ( 683) 4559 777.0 0
NP_001002878 (OMIM: 612733) THO complex subunit 5 ( 683) 4559 777.0 0
NP_001002877 (OMIM: 612733) THO complex subunit 5 ( 683) 4559 777.0 0
XP_006724410 (OMIM: 612733) PREDICTED: THO complex ( 694) 2701 465.2 3.8e-130
XP_005261854 (OMIM: 612733) PREDICTED: THO complex ( 694) 2701 465.2 3.8e-130
XP_005261855 (OMIM: 612733) PREDICTED: THO complex ( 694) 2701 465.2 3.8e-130
XP_005261856 (OMIM: 612733) PREDICTED: THO complex ( 694) 2701 465.2 3.8e-130
XP_016884516 (OMIM: 612733) PREDICTED: THO complex ( 694) 2701 465.2 3.8e-130
XP_005261858 (OMIM: 612733) PREDICTED: THO complex ( 344) 2337 403.8 5.5e-112
>>NP_003669 (OMIM: 612733) THO complex subunit 5 homolog (683 aa)
initn: 4559 init1: 4559 opt: 4559 Z-score: 4143.1 bits: 777.0 E(85289): 0
Smith-Waterman score: 4559; 99.9% identity (100.0% similar) in 683 aa overlap (1-683:1-683)
10 20 30 40 50 60
pF1KA0 MSSESSKKRKPKVIRSDGAPAEGKRNRSDTEQEGKYYSEEAEVDLRDPGRDYELYKYTCQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 MSSESSKKRKPKVIRSDGAPAEGKRNRSDTEQEGKYYSEEAEVDLRDPGRDYELYKYTCQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 ELQRLMAEIQDLKSRGGKDVAIEIEERRIQSCVHFMTLKKLNRLAHIRLKKGRDQTHEAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 ELQRLMAEIQDLKSRGGKDVAIEIEERRIQSCVHFMTLKKLNRLAHIRLKKGRDQTHEAK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA0 QKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIDLVSLEEFYKEAPPDISKAEVTM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 QKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIDLVSLEEFYKEAPPDISKAEVTM
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA0 GDPHQQTLARLDWELEQRKRLAEKYRECLSNKEKILKEIEVKKEYLSSLQPRLNSIMQAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 GDPHQQTLARLDWELEQRKRLAEKYRECLSNKEKILKEIEVKKEYLSSLQPRLNSIMQAS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA0 LPVQEYLFMPFDQAHKQYETARHLPPPLYVLFVQATAYGQACDKTLSVAIEGSVDEAKAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 LPVQEYLFMPFDQAHKQYETARHLPPPLYVLFVQATAYGQACDKTLSVAIEGSVDEAKAL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA0 FKPPEDSQDDESDSDAEEEQTTKRRRPTLGVQLDDKRKEMLKRHPLSVMLDLKCKDDSVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 FKPPEDSQDDESDSDAEEEQTTKRRRPTLGVQLDDKRKEMLKRHPLSVMLDLKCKDDSVL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA0 HLTFYYLMNLNIMTVKAKVTTAMELITPISAGDLLSPDSVLSCLYPGDHGKKTPNPANQY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 HLTFYYLMNLNIMTVKAKVTTAMELITPISAGDLLSPDSVLSCLYPGDHGKKTPNPANQY
370 380 390 400 410 420
430 440 450 460 470 480
pF1KA0 QFDKVGILTLSDYVLELGHPYLWVQKLGGLHFPKEQPQQTVIADHSLSASHMETTMKLLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 QFDKVGILTLSDYVLELGHPYLWVQKLGGLHFPKEQPQQTVIADHSLSASHMETTMKLLK
430 440 450 460 470 480
490 500 510 520 530 540
pF1KA0 TRVQSRLALHKQFASLEHGIVPVTSDCQYLFPAKVVSRLVKWVTIAHEDYMELHFTKDIV
::::::::::::::::::::::::::::::::::::::::::::.:::::::::::::::
NP_003 TRVQSRLALHKQFASLEHGIVPVTSDCQYLFPAKVVSRLVKWVTVAHEDYMELHFTKDIV
490 500 510 520 530 540
550 560 570 580 590 600
pF1KA0 DAGLAGDTNLYYMALIERGTAKLQAAVVLNPGYSSIPPVFQLCLNWKGEKTNSNDDNIRA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 DAGLAGDTNLYYMALIERGTAKLQAAVVLNPGYSSIPPVFQLCLNWKGEKTNSNDDNIRA
550 560 570 580 590 600
610 620 630 640 650 660
pF1KA0 MEGEVNVCYKELCGPWPSHQLLTNQLQRLCVLLDVYLETESHDDSVEGPKEFPQEKMCLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 MEGEVNVCYKELCGPWPSHQLLTNQLQRLCVLLDVYLETESHDDSVEGPKEFPQEKMCLR
610 620 630 640 650 660
670 680
pF1KA0 LFRGPSRMKPFKYNHPQGFFSHR
:::::::::::::::::::::::
NP_003 LFRGPSRMKPFKYNHPQGFFSHR
670 680
>>NP_001002879 (OMIM: 612733) THO complex subunit 5 homo (683 aa)
initn: 4559 init1: 4559 opt: 4559 Z-score: 4143.1 bits: 777.0 E(85289): 0
Smith-Waterman score: 4559; 99.9% identity (100.0% similar) in 683 aa overlap (1-683:1-683)
10 20 30 40 50 60
pF1KA0 MSSESSKKRKPKVIRSDGAPAEGKRNRSDTEQEGKYYSEEAEVDLRDPGRDYELYKYTCQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSSESSKKRKPKVIRSDGAPAEGKRNRSDTEQEGKYYSEEAEVDLRDPGRDYELYKYTCQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 ELQRLMAEIQDLKSRGGKDVAIEIEERRIQSCVHFMTLKKLNRLAHIRLKKGRDQTHEAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ELQRLMAEIQDLKSRGGKDVAIEIEERRIQSCVHFMTLKKLNRLAHIRLKKGRDQTHEAK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA0 QKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIDLVSLEEFYKEAPPDISKAEVTM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIDLVSLEEFYKEAPPDISKAEVTM
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA0 GDPHQQTLARLDWELEQRKRLAEKYRECLSNKEKILKEIEVKKEYLSSLQPRLNSIMQAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GDPHQQTLARLDWELEQRKRLAEKYRECLSNKEKILKEIEVKKEYLSSLQPRLNSIMQAS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA0 LPVQEYLFMPFDQAHKQYETARHLPPPLYVLFVQATAYGQACDKTLSVAIEGSVDEAKAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LPVQEYLFMPFDQAHKQYETARHLPPPLYVLFVQATAYGQACDKTLSVAIEGSVDEAKAL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA0 FKPPEDSQDDESDSDAEEEQTTKRRRPTLGVQLDDKRKEMLKRHPLSVMLDLKCKDDSVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FKPPEDSQDDESDSDAEEEQTTKRRRPTLGVQLDDKRKEMLKRHPLSVMLDLKCKDDSVL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA0 HLTFYYLMNLNIMTVKAKVTTAMELITPISAGDLLSPDSVLSCLYPGDHGKKTPNPANQY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HLTFYYLMNLNIMTVKAKVTTAMELITPISAGDLLSPDSVLSCLYPGDHGKKTPNPANQY
370 380 390 400 410 420
430 440 450 460 470 480
pF1KA0 QFDKVGILTLSDYVLELGHPYLWVQKLGGLHFPKEQPQQTVIADHSLSASHMETTMKLLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QFDKVGILTLSDYVLELGHPYLWVQKLGGLHFPKEQPQQTVIADHSLSASHMETTMKLLK
430 440 450 460 470 480
490 500 510 520 530 540
pF1KA0 TRVQSRLALHKQFASLEHGIVPVTSDCQYLFPAKVVSRLVKWVTIAHEDYMELHFTKDIV
::::::::::::::::::::::::::::::::::::::::::::.:::::::::::::::
NP_001 TRVQSRLALHKQFASLEHGIVPVTSDCQYLFPAKVVSRLVKWVTVAHEDYMELHFTKDIV
490 500 510 520 530 540
550 560 570 580 590 600
pF1KA0 DAGLAGDTNLYYMALIERGTAKLQAAVVLNPGYSSIPPVFQLCLNWKGEKTNSNDDNIRA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DAGLAGDTNLYYMALIERGTAKLQAAVVLNPGYSSIPPVFQLCLNWKGEKTNSNDDNIRA
550 560 570 580 590 600
610 620 630 640 650 660
pF1KA0 MEGEVNVCYKELCGPWPSHQLLTNQLQRLCVLLDVYLETESHDDSVEGPKEFPQEKMCLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MEGEVNVCYKELCGPWPSHQLLTNQLQRLCVLLDVYLETESHDDSVEGPKEFPQEKMCLR
610 620 630 640 650 660
670 680
pF1KA0 LFRGPSRMKPFKYNHPQGFFSHR
:::::::::::::::::::::::
NP_001 LFRGPSRMKPFKYNHPQGFFSHR
670 680
>>NP_001002878 (OMIM: 612733) THO complex subunit 5 homo (683 aa)
initn: 4559 init1: 4559 opt: 4559 Z-score: 4143.1 bits: 777.0 E(85289): 0
Smith-Waterman score: 4559; 99.9% identity (100.0% similar) in 683 aa overlap (1-683:1-683)
10 20 30 40 50 60
pF1KA0 MSSESSKKRKPKVIRSDGAPAEGKRNRSDTEQEGKYYSEEAEVDLRDPGRDYELYKYTCQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSSESSKKRKPKVIRSDGAPAEGKRNRSDTEQEGKYYSEEAEVDLRDPGRDYELYKYTCQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 ELQRLMAEIQDLKSRGGKDVAIEIEERRIQSCVHFMTLKKLNRLAHIRLKKGRDQTHEAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ELQRLMAEIQDLKSRGGKDVAIEIEERRIQSCVHFMTLKKLNRLAHIRLKKGRDQTHEAK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA0 QKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIDLVSLEEFYKEAPPDISKAEVTM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIDLVSLEEFYKEAPPDISKAEVTM
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA0 GDPHQQTLARLDWELEQRKRLAEKYRECLSNKEKILKEIEVKKEYLSSLQPRLNSIMQAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GDPHQQTLARLDWELEQRKRLAEKYRECLSNKEKILKEIEVKKEYLSSLQPRLNSIMQAS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA0 LPVQEYLFMPFDQAHKQYETARHLPPPLYVLFVQATAYGQACDKTLSVAIEGSVDEAKAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LPVQEYLFMPFDQAHKQYETARHLPPPLYVLFVQATAYGQACDKTLSVAIEGSVDEAKAL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA0 FKPPEDSQDDESDSDAEEEQTTKRRRPTLGVQLDDKRKEMLKRHPLSVMLDLKCKDDSVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FKPPEDSQDDESDSDAEEEQTTKRRRPTLGVQLDDKRKEMLKRHPLSVMLDLKCKDDSVL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA0 HLTFYYLMNLNIMTVKAKVTTAMELITPISAGDLLSPDSVLSCLYPGDHGKKTPNPANQY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HLTFYYLMNLNIMTVKAKVTTAMELITPISAGDLLSPDSVLSCLYPGDHGKKTPNPANQY
370 380 390 400 410 420
430 440 450 460 470 480
pF1KA0 QFDKVGILTLSDYVLELGHPYLWVQKLGGLHFPKEQPQQTVIADHSLSASHMETTMKLLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QFDKVGILTLSDYVLELGHPYLWVQKLGGLHFPKEQPQQTVIADHSLSASHMETTMKLLK
430 440 450 460 470 480
490 500 510 520 530 540
pF1KA0 TRVQSRLALHKQFASLEHGIVPVTSDCQYLFPAKVVSRLVKWVTIAHEDYMELHFTKDIV
::::::::::::::::::::::::::::::::::::::::::::.:::::::::::::::
NP_001 TRVQSRLALHKQFASLEHGIVPVTSDCQYLFPAKVVSRLVKWVTVAHEDYMELHFTKDIV
490 500 510 520 530 540
550 560 570 580 590 600
pF1KA0 DAGLAGDTNLYYMALIERGTAKLQAAVVLNPGYSSIPPVFQLCLNWKGEKTNSNDDNIRA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DAGLAGDTNLYYMALIERGTAKLQAAVVLNPGYSSIPPVFQLCLNWKGEKTNSNDDNIRA
550 560 570 580 590 600
610 620 630 640 650 660
pF1KA0 MEGEVNVCYKELCGPWPSHQLLTNQLQRLCVLLDVYLETESHDDSVEGPKEFPQEKMCLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MEGEVNVCYKELCGPWPSHQLLTNQLQRLCVLLDVYLETESHDDSVEGPKEFPQEKMCLR
610 620 630 640 650 660
670 680
pF1KA0 LFRGPSRMKPFKYNHPQGFFSHR
:::::::::::::::::::::::
NP_001 LFRGPSRMKPFKYNHPQGFFSHR
670 680
>>NP_001002877 (OMIM: 612733) THO complex subunit 5 homo (683 aa)
initn: 4559 init1: 4559 opt: 4559 Z-score: 4143.1 bits: 777.0 E(85289): 0
Smith-Waterman score: 4559; 99.9% identity (100.0% similar) in 683 aa overlap (1-683:1-683)
10 20 30 40 50 60
pF1KA0 MSSESSKKRKPKVIRSDGAPAEGKRNRSDTEQEGKYYSEEAEVDLRDPGRDYELYKYTCQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSSESSKKRKPKVIRSDGAPAEGKRNRSDTEQEGKYYSEEAEVDLRDPGRDYELYKYTCQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 ELQRLMAEIQDLKSRGGKDVAIEIEERRIQSCVHFMTLKKLNRLAHIRLKKGRDQTHEAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ELQRLMAEIQDLKSRGGKDVAIEIEERRIQSCVHFMTLKKLNRLAHIRLKKGRDQTHEAK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA0 QKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIDLVSLEEFYKEAPPDISKAEVTM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIDLVSLEEFYKEAPPDISKAEVTM
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA0 GDPHQQTLARLDWELEQRKRLAEKYRECLSNKEKILKEIEVKKEYLSSLQPRLNSIMQAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GDPHQQTLARLDWELEQRKRLAEKYRECLSNKEKILKEIEVKKEYLSSLQPRLNSIMQAS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA0 LPVQEYLFMPFDQAHKQYETARHLPPPLYVLFVQATAYGQACDKTLSVAIEGSVDEAKAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LPVQEYLFMPFDQAHKQYETARHLPPPLYVLFVQATAYGQACDKTLSVAIEGSVDEAKAL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA0 FKPPEDSQDDESDSDAEEEQTTKRRRPTLGVQLDDKRKEMLKRHPLSVMLDLKCKDDSVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FKPPEDSQDDESDSDAEEEQTTKRRRPTLGVQLDDKRKEMLKRHPLSVMLDLKCKDDSVL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA0 HLTFYYLMNLNIMTVKAKVTTAMELITPISAGDLLSPDSVLSCLYPGDHGKKTPNPANQY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HLTFYYLMNLNIMTVKAKVTTAMELITPISAGDLLSPDSVLSCLYPGDHGKKTPNPANQY
370 380 390 400 410 420
430 440 450 460 470 480
pF1KA0 QFDKVGILTLSDYVLELGHPYLWVQKLGGLHFPKEQPQQTVIADHSLSASHMETTMKLLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QFDKVGILTLSDYVLELGHPYLWVQKLGGLHFPKEQPQQTVIADHSLSASHMETTMKLLK
430 440 450 460 470 480
490 500 510 520 530 540
pF1KA0 TRVQSRLALHKQFASLEHGIVPVTSDCQYLFPAKVVSRLVKWVTIAHEDYMELHFTKDIV
::::::::::::::::::::::::::::::::::::::::::::.:::::::::::::::
NP_001 TRVQSRLALHKQFASLEHGIVPVTSDCQYLFPAKVVSRLVKWVTVAHEDYMELHFTKDIV
490 500 510 520 530 540
550 560 570 580 590 600
pF1KA0 DAGLAGDTNLYYMALIERGTAKLQAAVVLNPGYSSIPPVFQLCLNWKGEKTNSNDDNIRA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DAGLAGDTNLYYMALIERGTAKLQAAVVLNPGYSSIPPVFQLCLNWKGEKTNSNDDNIRA
550 560 570 580 590 600
610 620 630 640 650 660
pF1KA0 MEGEVNVCYKELCGPWPSHQLLTNQLQRLCVLLDVYLETESHDDSVEGPKEFPQEKMCLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MEGEVNVCYKELCGPWPSHQLLTNQLQRLCVLLDVYLETESHDDSVEGPKEFPQEKMCLR
610 620 630 640 650 660
670 680
pF1KA0 LFRGPSRMKPFKYNHPQGFFSHR
:::::::::::::::::::::::
NP_001 LFRGPSRMKPFKYNHPQGFFSHR
670 680
>>XP_006724410 (OMIM: 612733) PREDICTED: THO complex sub (694 aa)
initn: 4545 init1: 2701 opt: 2701 Z-score: 2457.6 bits: 465.2 E(85289): 3.8e-130
Smith-Waterman score: 4527; 98.3% identity (98.4% similar) in 694 aa overlap (1-683:1-694)
10 20 30 40 50 60
pF1KA0 MSSESSKKRKPKVIRSDGAPAEGKRNRSDTEQEGKYYSEEAEVDLRDPGRDYELYKYTCQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MSSESSKKRKPKVIRSDGAPAEGKRNRSDTEQEGKYYSEEAEVDLRDPGRDYELYKYTCQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 ELQRLMAEIQDLKSRGGKDVAIEIEERRIQSCVHFMTLKKLNRLAHIRLKKGRDQTHEAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 ELQRLMAEIQDLKSRGGKDVAIEIEERRIQSCVHFMTLKKLNRLAHIRLKKGRDQTHEAK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA0 QKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIDLVSLEEFYKEAPPDISKAEVTM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 QKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIDLVSLEEFYKEAPPDISKAEVTM
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA0 GDPHQQTLARLDWELEQRKRLAEKYRECLSNKEKILKEIEVKKEYLSSLQPRLNSIMQAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 GDPHQQTLARLDWELEQRKRLAEKYRECLSNKEKILKEIEVKKEYLSSLQPRLNSIMQAS
190 200 210 220 230 240
250 260 270 280
pF1KA0 LPVQEYLFMPFDQAHKQYETARHLPPPLYVLFVQATAYGQAC-----------DKTLSVA
:::::::::::::::::::::::::::::::::::::::::: :::::::
XP_006 LPVQEYLFMPFDQAHKQYETARHLPPPLYVLFVQATAYGQACAHMKSSQPPRQDKTLSVA
250 260 270 280 290 300
290 300 310 320 330 340
pF1KA0 IEGSVDEAKALFKPPEDSQDDESDSDAEEEQTTKRRRPTLGVQLDDKRKEMLKRHPLSVM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 IEGSVDEAKALFKPPEDSQDDESDSDAEEEQTTKRRRPTLGVQLDDKRKEMLKRHPLSVM
310 320 330 340 350 360
350 360 370 380 390 400
pF1KA0 LDLKCKDDSVLHLTFYYLMNLNIMTVKAKVTTAMELITPISAGDLLSPDSVLSCLYPGDH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 LDLKCKDDSVLHLTFYYLMNLNIMTVKAKVTTAMELITPISAGDLLSPDSVLSCLYPGDH
370 380 390 400 410 420
410 420 430 440 450 460
pF1KA0 GKKTPNPANQYQFDKVGILTLSDYVLELGHPYLWVQKLGGLHFPKEQPQQTVIADHSLSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 GKKTPNPANQYQFDKVGILTLSDYVLELGHPYLWVQKLGGLHFPKEQPQQTVIADHSLSA
430 440 450 460 470 480
470 480 490 500 510 520
pF1KA0 SHMETTMKLLKTRVQSRLALHKQFASLEHGIVPVTSDCQYLFPAKVVSRLVKWVTIAHED
:::::::::::::::::::::::::::::::::::::::::::::::::::::::.::::
XP_006 SHMETTMKLLKTRVQSRLALHKQFASLEHGIVPVTSDCQYLFPAKVVSRLVKWVTVAHED
490 500 510 520 530 540
530 540 550 560 570 580
pF1KA0 YMELHFTKDIVDAGLAGDTNLYYMALIERGTAKLQAAVVLNPGYSSIPPVFQLCLNWKGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 YMELHFTKDIVDAGLAGDTNLYYMALIERGTAKLQAAVVLNPGYSSIPPVFQLCLNWKGE
550 560 570 580 590 600
590 600 610 620 630 640
pF1KA0 KTNSNDDNIRAMEGEVNVCYKELCGPWPSHQLLTNQLQRLCVLLDVYLETESHDDSVEGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 KTNSNDDNIRAMEGEVNVCYKELCGPWPSHQLLTNQLQRLCVLLDVYLETESHDDSVEGP
610 620 630 640 650 660
650 660 670 680
pF1KA0 KEFPQEKMCLRLFRGPSRMKPFKYNHPQGFFSHR
::::::::::::::::::::::::::::::::::
XP_006 KEFPQEKMCLRLFRGPSRMKPFKYNHPQGFFSHR
670 680 690
>>XP_005261854 (OMIM: 612733) PREDICTED: THO complex sub (694 aa)
initn: 4545 init1: 2701 opt: 2701 Z-score: 2457.6 bits: 465.2 E(85289): 3.8e-130
Smith-Waterman score: 4527; 98.3% identity (98.4% similar) in 694 aa overlap (1-683:1-694)
10 20 30 40 50 60
pF1KA0 MSSESSKKRKPKVIRSDGAPAEGKRNRSDTEQEGKYYSEEAEVDLRDPGRDYELYKYTCQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MSSESSKKRKPKVIRSDGAPAEGKRNRSDTEQEGKYYSEEAEVDLRDPGRDYELYKYTCQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 ELQRLMAEIQDLKSRGGKDVAIEIEERRIQSCVHFMTLKKLNRLAHIRLKKGRDQTHEAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ELQRLMAEIQDLKSRGGKDVAIEIEERRIQSCVHFMTLKKLNRLAHIRLKKGRDQTHEAK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA0 QKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIDLVSLEEFYKEAPPDISKAEVTM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIDLVSLEEFYKEAPPDISKAEVTM
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA0 GDPHQQTLARLDWELEQRKRLAEKYRECLSNKEKILKEIEVKKEYLSSLQPRLNSIMQAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GDPHQQTLARLDWELEQRKRLAEKYRECLSNKEKILKEIEVKKEYLSSLQPRLNSIMQAS
190 200 210 220 230 240
250 260 270 280
pF1KA0 LPVQEYLFMPFDQAHKQYETARHLPPPLYVLFVQATAYGQAC-----------DKTLSVA
:::::::::::::::::::::::::::::::::::::::::: :::::::
XP_005 LPVQEYLFMPFDQAHKQYETARHLPPPLYVLFVQATAYGQACAHMKSSQPPRQDKTLSVA
250 260 270 280 290 300
290 300 310 320 330 340
pF1KA0 IEGSVDEAKALFKPPEDSQDDESDSDAEEEQTTKRRRPTLGVQLDDKRKEMLKRHPLSVM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 IEGSVDEAKALFKPPEDSQDDESDSDAEEEQTTKRRRPTLGVQLDDKRKEMLKRHPLSVM
310 320 330 340 350 360
350 360 370 380 390 400
pF1KA0 LDLKCKDDSVLHLTFYYLMNLNIMTVKAKVTTAMELITPISAGDLLSPDSVLSCLYPGDH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LDLKCKDDSVLHLTFYYLMNLNIMTVKAKVTTAMELITPISAGDLLSPDSVLSCLYPGDH
370 380 390 400 410 420
410 420 430 440 450 460
pF1KA0 GKKTPNPANQYQFDKVGILTLSDYVLELGHPYLWVQKLGGLHFPKEQPQQTVIADHSLSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GKKTPNPANQYQFDKVGILTLSDYVLELGHPYLWVQKLGGLHFPKEQPQQTVIADHSLSA
430 440 450 460 470 480
470 480 490 500 510 520
pF1KA0 SHMETTMKLLKTRVQSRLALHKQFASLEHGIVPVTSDCQYLFPAKVVSRLVKWVTIAHED
:::::::::::::::::::::::::::::::::::::::::::::::::::::::.::::
XP_005 SHMETTMKLLKTRVQSRLALHKQFASLEHGIVPVTSDCQYLFPAKVVSRLVKWVTVAHED
490 500 510 520 530 540
530 540 550 560 570 580
pF1KA0 YMELHFTKDIVDAGLAGDTNLYYMALIERGTAKLQAAVVLNPGYSSIPPVFQLCLNWKGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 YMELHFTKDIVDAGLAGDTNLYYMALIERGTAKLQAAVVLNPGYSSIPPVFQLCLNWKGE
550 560 570 580 590 600
590 600 610 620 630 640
pF1KA0 KTNSNDDNIRAMEGEVNVCYKELCGPWPSHQLLTNQLQRLCVLLDVYLETESHDDSVEGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KTNSNDDNIRAMEGEVNVCYKELCGPWPSHQLLTNQLQRLCVLLDVYLETESHDDSVEGP
610 620 630 640 650 660
650 660 670 680
pF1KA0 KEFPQEKMCLRLFRGPSRMKPFKYNHPQGFFSHR
::::::::::::::::::::::::::::::::::
XP_005 KEFPQEKMCLRLFRGPSRMKPFKYNHPQGFFSHR
670 680 690
>>XP_005261855 (OMIM: 612733) PREDICTED: THO complex sub (694 aa)
initn: 4545 init1: 2701 opt: 2701 Z-score: 2457.6 bits: 465.2 E(85289): 3.8e-130
Smith-Waterman score: 4527; 98.3% identity (98.4% similar) in 694 aa overlap (1-683:1-694)
10 20 30 40 50 60
pF1KA0 MSSESSKKRKPKVIRSDGAPAEGKRNRSDTEQEGKYYSEEAEVDLRDPGRDYELYKYTCQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MSSESSKKRKPKVIRSDGAPAEGKRNRSDTEQEGKYYSEEAEVDLRDPGRDYELYKYTCQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 ELQRLMAEIQDLKSRGGKDVAIEIEERRIQSCVHFMTLKKLNRLAHIRLKKGRDQTHEAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ELQRLMAEIQDLKSRGGKDVAIEIEERRIQSCVHFMTLKKLNRLAHIRLKKGRDQTHEAK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA0 QKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIDLVSLEEFYKEAPPDISKAEVTM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIDLVSLEEFYKEAPPDISKAEVTM
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA0 GDPHQQTLARLDWELEQRKRLAEKYRECLSNKEKILKEIEVKKEYLSSLQPRLNSIMQAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GDPHQQTLARLDWELEQRKRLAEKYRECLSNKEKILKEIEVKKEYLSSLQPRLNSIMQAS
190 200 210 220 230 240
250 260 270 280
pF1KA0 LPVQEYLFMPFDQAHKQYETARHLPPPLYVLFVQATAYGQAC-----------DKTLSVA
:::::::::::::::::::::::::::::::::::::::::: :::::::
XP_005 LPVQEYLFMPFDQAHKQYETARHLPPPLYVLFVQATAYGQACAHMKSSQPPRQDKTLSVA
250 260 270 280 290 300
290 300 310 320 330 340
pF1KA0 IEGSVDEAKALFKPPEDSQDDESDSDAEEEQTTKRRRPTLGVQLDDKRKEMLKRHPLSVM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 IEGSVDEAKALFKPPEDSQDDESDSDAEEEQTTKRRRPTLGVQLDDKRKEMLKRHPLSVM
310 320 330 340 350 360
350 360 370 380 390 400
pF1KA0 LDLKCKDDSVLHLTFYYLMNLNIMTVKAKVTTAMELITPISAGDLLSPDSVLSCLYPGDH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LDLKCKDDSVLHLTFYYLMNLNIMTVKAKVTTAMELITPISAGDLLSPDSVLSCLYPGDH
370 380 390 400 410 420
410 420 430 440 450 460
pF1KA0 GKKTPNPANQYQFDKVGILTLSDYVLELGHPYLWVQKLGGLHFPKEQPQQTVIADHSLSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GKKTPNPANQYQFDKVGILTLSDYVLELGHPYLWVQKLGGLHFPKEQPQQTVIADHSLSA
430 440 450 460 470 480
470 480 490 500 510 520
pF1KA0 SHMETTMKLLKTRVQSRLALHKQFASLEHGIVPVTSDCQYLFPAKVVSRLVKWVTIAHED
:::::::::::::::::::::::::::::::::::::::::::::::::::::::.::::
XP_005 SHMETTMKLLKTRVQSRLALHKQFASLEHGIVPVTSDCQYLFPAKVVSRLVKWVTVAHED
490 500 510 520 530 540
530 540 550 560 570 580
pF1KA0 YMELHFTKDIVDAGLAGDTNLYYMALIERGTAKLQAAVVLNPGYSSIPPVFQLCLNWKGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 YMELHFTKDIVDAGLAGDTNLYYMALIERGTAKLQAAVVLNPGYSSIPPVFQLCLNWKGE
550 560 570 580 590 600
590 600 610 620 630 640
pF1KA0 KTNSNDDNIRAMEGEVNVCYKELCGPWPSHQLLTNQLQRLCVLLDVYLETESHDDSVEGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KTNSNDDNIRAMEGEVNVCYKELCGPWPSHQLLTNQLQRLCVLLDVYLETESHDDSVEGP
610 620 630 640 650 660
650 660 670 680
pF1KA0 KEFPQEKMCLRLFRGPSRMKPFKYNHPQGFFSHR
::::::::::::::::::::::::::::::::::
XP_005 KEFPQEKMCLRLFRGPSRMKPFKYNHPQGFFSHR
670 680 690
>>XP_005261856 (OMIM: 612733) PREDICTED: THO complex sub (694 aa)
initn: 4545 init1: 2701 opt: 2701 Z-score: 2457.6 bits: 465.2 E(85289): 3.8e-130
Smith-Waterman score: 4527; 98.3% identity (98.4% similar) in 694 aa overlap (1-683:1-694)
10 20 30 40 50 60
pF1KA0 MSSESSKKRKPKVIRSDGAPAEGKRNRSDTEQEGKYYSEEAEVDLRDPGRDYELYKYTCQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MSSESSKKRKPKVIRSDGAPAEGKRNRSDTEQEGKYYSEEAEVDLRDPGRDYELYKYTCQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 ELQRLMAEIQDLKSRGGKDVAIEIEERRIQSCVHFMTLKKLNRLAHIRLKKGRDQTHEAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ELQRLMAEIQDLKSRGGKDVAIEIEERRIQSCVHFMTLKKLNRLAHIRLKKGRDQTHEAK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA0 QKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIDLVSLEEFYKEAPPDISKAEVTM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIDLVSLEEFYKEAPPDISKAEVTM
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA0 GDPHQQTLARLDWELEQRKRLAEKYRECLSNKEKILKEIEVKKEYLSSLQPRLNSIMQAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GDPHQQTLARLDWELEQRKRLAEKYRECLSNKEKILKEIEVKKEYLSSLQPRLNSIMQAS
190 200 210 220 230 240
250 260 270 280
pF1KA0 LPVQEYLFMPFDQAHKQYETARHLPPPLYVLFVQATAYGQAC-----------DKTLSVA
:::::::::::::::::::::::::::::::::::::::::: :::::::
XP_005 LPVQEYLFMPFDQAHKQYETARHLPPPLYVLFVQATAYGQACAHMKSSQPPRQDKTLSVA
250 260 270 280 290 300
290 300 310 320 330 340
pF1KA0 IEGSVDEAKALFKPPEDSQDDESDSDAEEEQTTKRRRPTLGVQLDDKRKEMLKRHPLSVM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 IEGSVDEAKALFKPPEDSQDDESDSDAEEEQTTKRRRPTLGVQLDDKRKEMLKRHPLSVM
310 320 330 340 350 360
350 360 370 380 390 400
pF1KA0 LDLKCKDDSVLHLTFYYLMNLNIMTVKAKVTTAMELITPISAGDLLSPDSVLSCLYPGDH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LDLKCKDDSVLHLTFYYLMNLNIMTVKAKVTTAMELITPISAGDLLSPDSVLSCLYPGDH
370 380 390 400 410 420
410 420 430 440 450 460
pF1KA0 GKKTPNPANQYQFDKVGILTLSDYVLELGHPYLWVQKLGGLHFPKEQPQQTVIADHSLSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GKKTPNPANQYQFDKVGILTLSDYVLELGHPYLWVQKLGGLHFPKEQPQQTVIADHSLSA
430 440 450 460 470 480
470 480 490 500 510 520
pF1KA0 SHMETTMKLLKTRVQSRLALHKQFASLEHGIVPVTSDCQYLFPAKVVSRLVKWVTIAHED
:::::::::::::::::::::::::::::::::::::::::::::::::::::::.::::
XP_005 SHMETTMKLLKTRVQSRLALHKQFASLEHGIVPVTSDCQYLFPAKVVSRLVKWVTVAHED
490 500 510 520 530 540
530 540 550 560 570 580
pF1KA0 YMELHFTKDIVDAGLAGDTNLYYMALIERGTAKLQAAVVLNPGYSSIPPVFQLCLNWKGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 YMELHFTKDIVDAGLAGDTNLYYMALIERGTAKLQAAVVLNPGYSSIPPVFQLCLNWKGE
550 560 570 580 590 600
590 600 610 620 630 640
pF1KA0 KTNSNDDNIRAMEGEVNVCYKELCGPWPSHQLLTNQLQRLCVLLDVYLETESHDDSVEGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KTNSNDDNIRAMEGEVNVCYKELCGPWPSHQLLTNQLQRLCVLLDVYLETESHDDSVEGP
610 620 630 640 650 660
650 660 670 680
pF1KA0 KEFPQEKMCLRLFRGPSRMKPFKYNHPQGFFSHR
::::::::::::::::::::::::::::::::::
XP_005 KEFPQEKMCLRLFRGPSRMKPFKYNHPQGFFSHR
670 680 690
>>XP_016884516 (OMIM: 612733) PREDICTED: THO complex sub (694 aa)
initn: 4545 init1: 2701 opt: 2701 Z-score: 2457.6 bits: 465.2 E(85289): 3.8e-130
Smith-Waterman score: 4527; 98.3% identity (98.4% similar) in 694 aa overlap (1-683:1-694)
10 20 30 40 50 60
pF1KA0 MSSESSKKRKPKVIRSDGAPAEGKRNRSDTEQEGKYYSEEAEVDLRDPGRDYELYKYTCQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MSSESSKKRKPKVIRSDGAPAEGKRNRSDTEQEGKYYSEEAEVDLRDPGRDYELYKYTCQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 ELQRLMAEIQDLKSRGGKDVAIEIEERRIQSCVHFMTLKKLNRLAHIRLKKGRDQTHEAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ELQRLMAEIQDLKSRGGKDVAIEIEERRIQSCVHFMTLKKLNRLAHIRLKKGRDQTHEAK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA0 QKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIDLVSLEEFYKEAPPDISKAEVTM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIDLVSLEEFYKEAPPDISKAEVTM
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA0 GDPHQQTLARLDWELEQRKRLAEKYRECLSNKEKILKEIEVKKEYLSSLQPRLNSIMQAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GDPHQQTLARLDWELEQRKRLAEKYRECLSNKEKILKEIEVKKEYLSSLQPRLNSIMQAS
190 200 210 220 230 240
250 260 270 280
pF1KA0 LPVQEYLFMPFDQAHKQYETARHLPPPLYVLFVQATAYGQAC-----------DKTLSVA
:::::::::::::::::::::::::::::::::::::::::: :::::::
XP_016 LPVQEYLFMPFDQAHKQYETARHLPPPLYVLFVQATAYGQACAHMKSSQPPRQDKTLSVA
250 260 270 280 290 300
290 300 310 320 330 340
pF1KA0 IEGSVDEAKALFKPPEDSQDDESDSDAEEEQTTKRRRPTLGVQLDDKRKEMLKRHPLSVM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IEGSVDEAKALFKPPEDSQDDESDSDAEEEQTTKRRRPTLGVQLDDKRKEMLKRHPLSVM
310 320 330 340 350 360
350 360 370 380 390 400
pF1KA0 LDLKCKDDSVLHLTFYYLMNLNIMTVKAKVTTAMELITPISAGDLLSPDSVLSCLYPGDH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LDLKCKDDSVLHLTFYYLMNLNIMTVKAKVTTAMELITPISAGDLLSPDSVLSCLYPGDH
370 380 390 400 410 420
410 420 430 440 450 460
pF1KA0 GKKTPNPANQYQFDKVGILTLSDYVLELGHPYLWVQKLGGLHFPKEQPQQTVIADHSLSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GKKTPNPANQYQFDKVGILTLSDYVLELGHPYLWVQKLGGLHFPKEQPQQTVIADHSLSA
430 440 450 460 470 480
470 480 490 500 510 520
pF1KA0 SHMETTMKLLKTRVQSRLALHKQFASLEHGIVPVTSDCQYLFPAKVVSRLVKWVTIAHED
:::::::::::::::::::::::::::::::::::::::::::::::::::::::.::::
XP_016 SHMETTMKLLKTRVQSRLALHKQFASLEHGIVPVTSDCQYLFPAKVVSRLVKWVTVAHED
490 500 510 520 530 540
530 540 550 560 570 580
pF1KA0 YMELHFTKDIVDAGLAGDTNLYYMALIERGTAKLQAAVVLNPGYSSIPPVFQLCLNWKGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YMELHFTKDIVDAGLAGDTNLYYMALIERGTAKLQAAVVLNPGYSSIPPVFQLCLNWKGE
550 560 570 580 590 600
590 600 610 620 630 640
pF1KA0 KTNSNDDNIRAMEGEVNVCYKELCGPWPSHQLLTNQLQRLCVLLDVYLETESHDDSVEGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KTNSNDDNIRAMEGEVNVCYKELCGPWPSHQLLTNQLQRLCVLLDVYLETESHDDSVEGP
610 620 630 640 650 660
650 660 670 680
pF1KA0 KEFPQEKMCLRLFRGPSRMKPFKYNHPQGFFSHR
::::::::::::::::::::::::::::::::::
XP_016 KEFPQEKMCLRLFRGPSRMKPFKYNHPQGFFSHR
670 680 690
>>XP_005261858 (OMIM: 612733) PREDICTED: THO complex sub (344 aa)
initn: 2337 init1: 2337 opt: 2337 Z-score: 2131.5 bits: 403.8 E(85289): 5.5e-112
Smith-Waterman score: 2337; 99.7% identity (100.0% similar) in 344 aa overlap (340-683:1-344)
310 320 330 340 350 360
pF1KA0 DESDSDAEEEQTTKRRRPTLGVQLDDKRKEMLKRHPLSVMLDLKCKDDSVLHLTFYYLMN
::::::::::::::::::::::::::::::
XP_005 MLKRHPLSVMLDLKCKDDSVLHLTFYYLMN
10 20 30
370 380 390 400 410 420
pF1KA0 LNIMTVKAKVTTAMELITPISAGDLLSPDSVLSCLYPGDHGKKTPNPANQYQFDKVGILT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LNIMTVKAKVTTAMELITPISAGDLLSPDSVLSCLYPGDHGKKTPNPANQYQFDKVGILT
40 50 60 70 80 90
430 440 450 460 470 480
pF1KA0 LSDYVLELGHPYLWVQKLGGLHFPKEQPQQTVIADHSLSASHMETTMKLLKTRVQSRLAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LSDYVLELGHPYLWVQKLGGLHFPKEQPQQTVIADHSLSASHMETTMKLLKTRVQSRLAL
100 110 120 130 140 150
490 500 510 520 530 540
pF1KA0 HKQFASLEHGIVPVTSDCQYLFPAKVVSRLVKWVTIAHEDYMELHFTKDIVDAGLAGDTN
:::::::::::::::::::::::::::::::::::.::::::::::::::::::::::::
XP_005 HKQFASLEHGIVPVTSDCQYLFPAKVVSRLVKWVTVAHEDYMELHFTKDIVDAGLAGDTN
160 170 180 190 200 210
550 560 570 580 590 600
pF1KA0 LYYMALIERGTAKLQAAVVLNPGYSSIPPVFQLCLNWKGEKTNSNDDNIRAMEGEVNVCY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LYYMALIERGTAKLQAAVVLNPGYSSIPPVFQLCLNWKGEKTNSNDDNIRAMEGEVNVCY
220 230 240 250 260 270
610 620 630 640 650 660
pF1KA0 KELCGPWPSHQLLTNQLQRLCVLLDVYLETESHDDSVEGPKEFPQEKMCLRLFRGPSRMK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KELCGPWPSHQLLTNQLQRLCVLLDVYLETESHDDSVEGPKEFPQEKMCLRLFRGPSRMK
280 290 300 310 320 330
670 680
pF1KA0 PFKYNHPQGFFSHR
::::::::::::::
XP_005 PFKYNHPQGFFSHR
340
683 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 01:14:11 2016 done: Fri Nov 4 01:14:12 2016
Total Scan time: 11.090 Total Display time: 0.160
Function used was FASTA [36.3.4 Apr, 2011]