Result of FASTA (omim) for
pF1KA0162
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KA0162, 1726 aa
1>>>pF1KA0162 1726 - 1726 aa - 1726 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 10.2925+/-0.000496; mu= 1.9284+/- 0.031
mean_var=297.7686+/-59.680, 0's: 0 Z-trim(116.9): 20 B-trim: 0 in 0/60
Lambda= 0.074325
statistics sampled from 28449 (28467) to 28449 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.658), E-opt: 0.2 (0.334), width: 16
Scan time: 20.670
The best scores are: opt bits E(85289)
NP_001307684 (OMIM: 601333) transcription elongati (1726) 11614 1260.8 0
XP_016880467 (OMIM: 601333) PREDICTED: transcripti (1726) 11614 1260.8 0
XP_016880468 (OMIM: 601333) PREDICTED: transcripti (1726) 11614 1260.8 0
NP_003161 (OMIM: 601333) transcription elongation (1726) 11614 1260.8 0
XP_016880469 (OMIM: 601333) PREDICTED: transcripti (1603) 10798 1173.3 0
>>NP_001307684 (OMIM: 601333) transcription elongation f (1726 aa)
initn: 11614 init1: 11614 opt: 11614 Z-score: 6743.4 bits: 1260.8 E(85289): 0
Smith-Waterman score: 11614; 100.0% identity (100.0% similar) in 1726 aa overlap (1-1726:1-1726)
10 20 30 40 50 60
pF1KA0 MSDFVESEAEESEEEYNDEGEVVPRVTKKFVEEEDDDEEEEEENLDDQDEQGNLKGFIND
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSDFVESEAEESEEEYNDEGEVVPRVTKKFVEEEDDDEEEEEENLDDQDEQGNLKGFIND
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 DDDEDEGEEDEGSDSGDSEDDVGHKKRKRTSFDDRLEDDDFDLIEENLGVKVKRGQKYRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DDDEDEGEEDEGSDSGDSEDDVGHKKRKRTSFDDRLEDDDFDLIEENLGVKVKRGQKYRR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA0 VKKMSDDEDDDEEEYGKEEHEKEAIAEEIFQDGEGEEGQEAMEAPMAPPEEEEEDDEESD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VKKMSDDEDDDEEEYGKEEHEKEAIAEEIFQDGEGEEGQEAMEAPMAPPEEEEEDDEESD
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA0 IDDFIVDDDGQPLKKPKWRKKLPGYTDAALQEAQEIFGVDFDYDEFEKYNEYDEELEEEY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IDDFIVDDDGQPLKKPKWRKKLPGYTDAALQEAQEIFGVDFDYDEFEKYNEYDEELEEEY
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA0 EYEDDEAEGEIRVRPKKTTKKRVSRRSIFEMYEPSELESSHLTDQDNEIRATDLPERFQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EYEDDEAEGEIRVRPKKTTKKRVSRRSIFEMYEPSELESSHLTDQDNEIRATDLPERFQL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA0 RSIPVKGAEDDELEEEADWIYRNAFATPTISLQESCDYLDRGQPASSFSRKGPSTIQKIK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RSIPVKGAEDDELEEEADWIYRNAFATPTISLQESCDYLDRGQPASSFSRKGPSTIQKIK
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA0 EALGFMRNQHFEVPFIAFYRKEYVEPELHINDLWRVWQWDEKWTQLRIRKENLTRLFEKM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EALGFMRNQHFEVPFIAFYRKEYVEPELHINDLWRVWQWDEKWTQLRIRKENLTRLFEKM
370 380 390 400 410 420
430 440 450 460 470 480
pF1KA0 QAYQYEQISADPDKPLADGIRALDTTDMERLKDVQSMDELKDVYNHFLLYYGRDIPKMQN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QAYQYEQISADPDKPLADGIRALDTTDMERLKDVQSMDELKDVYNHFLLYYGRDIPKMQN
430 440 450 460 470 480
490 500 510 520 530 540
pF1KA0 AAKASRKKLKRVREEGDEEGEGDEAEDEEQRGPELKQASRRDMYTICQSAGLDGLAKKFG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AAKASRKKLKRVREEGDEEGEGDEAEDEEQRGPELKQASRRDMYTICQSAGLDGLAKKFG
490 500 510 520 530 540
550 560 570 580 590 600
pF1KA0 LTPEQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPTPEAVLEGARYMVALQIAREP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LTPEQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPTPEAVLEGARYMVALQIAREP
550 560 570 580 590 600
610 620 630 640 650 660
pF1KA0 LVRQVLRQTFQERAKLNITPTKKGRKDVDEAHYAYSFKYLKNKPVKELRDDQFLKICLAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LVRQVLRQTFQERAKLNITPTKKGRKDVDEAHYAYSFKYLKNKPVKELRDDQFLKICLAE
610 620 630 640 650 660
670 680 690 700 710 720
pF1KA0 DEGLLTTDISIDLKGVEGYGNDQTYFEEIKQFYYRDEFSHQVQEWNRQRTMAIERALQQF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DEGLLTTDISIDLKGVEGYGNDQTYFEEIKQFYYRDEFSHQVQEWNRQRTMAIERALQQF
670 680 690 700 710 720
730 740 750 760 770 780
pF1KA0 LYVQMAKELKNKLLAEAKEYVIKACSRKLYNWLRVAPYRPDQQVEEDDDFMDENQGKGIR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LYVQMAKELKNKLLAEAKEYVIKACSRKLYNWLRVAPYRPDQQVEEDDDFMDENQGKGIR
730 740 750 760 770 780
790 800 810 820 830 840
pF1KA0 VLGIAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRTAWREEEREKKAQDIETLKKFL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VLGIAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRTAWREEEREKKAQDIETLKKFL
790 800 810 820 830 840
850 860 870 880 890 900
pF1KA0 LNKKPHVVTVAGENRDAQMLIEDVKRIVHELDQGQQLSSIGVELVDNELAILYMNSKKSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LNKKPHVVTVAGENRDAQMLIEDVKRIVHELDQGQQLSSIGVELVDNELAILYMNSKKSE
850 860 870 880 890 900
910 920 930 940 950 960
pF1KA0 AEFRDYPPVLRQAVSLARRIQDPLIEFAQVCSSDEDILCLKFHPLQEHVVKEELLNALYC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AEFRDYPPVLRQAVSLARRIQDPLIEFAQVCSSDEDILCLKFHPLQEHVVKEELLNALYC
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KA0 EFINRVNEVGVDVNRAIAHPYSQALIQYVCGLGPRKGTHLLKILKQNNTRLESRTQLVTM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EFINRVNEVGVDVNRAIAHPYSQALIQYVCGLGPRKGTHLLKILKQNNTRLESRTQLVTM
970 980 990 1000 1010 1020
1030 1040 1050 1060 1070 1080
pF1KA0 CHMGPKVFMNCAGFLKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CHMGPKVFMNCAGFLKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESA
1030 1040 1050 1060 1070 1080
1090 1100 1110 1120 1130 1140
pF1KA0 EDANPAGALEEILENPERLKDLDLDAFAEELERQGYGDKHITLYDIRAELSCRYKDLRTA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EDANPAGALEEILENPERLKDLDLDAFAEELERQGYGDKHITLYDIRAELSCRYKDLRTA
1090 1100 1110 1120 1130 1140
1150 1160 1170 1180 1190 1200
pF1KA0 YRSPNTEEIFNMLTKETPETFYIGKLIICNVTGIAHRRPQGESYDQAIRNDETGLWQCPF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YRSPNTEEIFNMLTKETPETFYIGKLIICNVTGIAHRRPQGESYDQAIRNDETGLWQCPF
1150 1160 1170 1180 1190 1200
1210 1220 1230 1240 1250 1260
pF1KA0 CQQDNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVTGFIPTKFLSDKVVKRPEERVKVG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CQQDNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVTGFIPTKFLSDKVVKRPEERVKVG
1210 1220 1230 1240 1250 1260
1270 1280 1290 1300 1310 1320
pF1KA0 MTVHCRIMKIDIEKFSADLTCRTSDLMDRNNEWKLPKDTYYDFDAEAADHKQEEDMKRKQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MTVHCRIMKIDIEKFSADLTCRTSDLMDRNNEWKLPKDTYYDFDAEAADHKQEEDMKRKQ
1270 1280 1290 1300 1310 1320
1330 1340 1350 1360 1370 1380
pF1KA0 QRTTYIKRVIAHPSFHNINFKQAEKMMETMDQGDVIIRPSSKGENHLTVTWKVSDGIYQH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QRTTYIKRVIAHPSFHNINFKQAEKMMETMDQGDVIIRPSSKGENHLTVTWKVSDGIYQH
1330 1340 1350 1360 1370 1380
1390 1400 1410 1420 1430 1440
pF1KA0 VDVREEGKENAFSLGATLWINSEEFEDLDEIVARYVQPMASFARDLLNHKYYQDCSGGDR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VDVREEGKENAFSLGATLWINSEEFEDLDEIVARYVQPMASFARDLLNHKYYQDCSGGDR
1390 1400 1410 1420 1430 1440
1450 1460 1470 1480 1490 1500
pF1KA0 KKLEELLIKTKKEKPTFIPYFICACKELPGKFLLGYQPRGKPRIEYVTVTPEGFRYRGQI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KKLEELLIKTKKEKPTFIPYFICACKELPGKFLLGYQPRGKPRIEYVTVTPEGFRYRGQI
1450 1460 1470 1480 1490 1500
1510 1520 1530 1540 1550 1560
pF1KA0 FPTVNGLFRWFKDHYQDPVPGITPSSSSRTRTPASINATPANINLADLTRAVNALPQNMT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FPTVNGLFRWFKDHYQDPVPGITPSSSSRTRTPASINATPANINLADLTRAVNALPQNMT
1510 1520 1530 1540 1550 1560
1570 1580 1590 1600 1610 1620
pF1KA0 SQMFSAIAAVTGQGQNPNATPAQWASSQYGYGGSGGGSSAYHVFPTPAQQPVATPLMTPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SQMFSAIAAVTGQGQNPNATPAQWASSQYGYGGSGGGSSAYHVFPTPAQQPVATPLMTPS
1570 1580 1590 1600 1610 1620
1630 1640 1650 1660 1670 1680
pF1KA0 YSYTTPSQPITTPQYHQLQASTTPQSAQAQPQPSSSSRQRQQQPKSNSHAAIDWGKMAEQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YSYTTPSQPITTPQYHQLQASTTPQSAQAQPQPSSSSRQRQQQPKSNSHAAIDWGKMAEQ
1630 1640 1650 1660 1670 1680
1690 1700 1710 1720
pF1KA0 WLQEKEAERRKQKQRLTPRPSPSPMIESTPMSIAGDATPLLDEMDR
::::::::::::::::::::::::::::::::::::::::::::::
NP_001 WLQEKEAERRKQKQRLTPRPSPSPMIESTPMSIAGDATPLLDEMDR
1690 1700 1710 1720
>>XP_016880467 (OMIM: 601333) PREDICTED: transcription e (1726 aa)
initn: 11614 init1: 11614 opt: 11614 Z-score: 6743.4 bits: 1260.8 E(85289): 0
Smith-Waterman score: 11614; 100.0% identity (100.0% similar) in 1726 aa overlap (1-1726:1-1726)
10 20 30 40 50 60
pF1KA0 MSDFVESEAEESEEEYNDEGEVVPRVTKKFVEEEDDDEEEEEENLDDQDEQGNLKGFIND
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MSDFVESEAEESEEEYNDEGEVVPRVTKKFVEEEDDDEEEEEENLDDQDEQGNLKGFIND
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 DDDEDEGEEDEGSDSGDSEDDVGHKKRKRTSFDDRLEDDDFDLIEENLGVKVKRGQKYRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DDDEDEGEEDEGSDSGDSEDDVGHKKRKRTSFDDRLEDDDFDLIEENLGVKVKRGQKYRR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA0 VKKMSDDEDDDEEEYGKEEHEKEAIAEEIFQDGEGEEGQEAMEAPMAPPEEEEEDDEESD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VKKMSDDEDDDEEEYGKEEHEKEAIAEEIFQDGEGEEGQEAMEAPMAPPEEEEEDDEESD
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA0 IDDFIVDDDGQPLKKPKWRKKLPGYTDAALQEAQEIFGVDFDYDEFEKYNEYDEELEEEY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IDDFIVDDDGQPLKKPKWRKKLPGYTDAALQEAQEIFGVDFDYDEFEKYNEYDEELEEEY
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA0 EYEDDEAEGEIRVRPKKTTKKRVSRRSIFEMYEPSELESSHLTDQDNEIRATDLPERFQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EYEDDEAEGEIRVRPKKTTKKRVSRRSIFEMYEPSELESSHLTDQDNEIRATDLPERFQL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA0 RSIPVKGAEDDELEEEADWIYRNAFATPTISLQESCDYLDRGQPASSFSRKGPSTIQKIK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RSIPVKGAEDDELEEEADWIYRNAFATPTISLQESCDYLDRGQPASSFSRKGPSTIQKIK
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA0 EALGFMRNQHFEVPFIAFYRKEYVEPELHINDLWRVWQWDEKWTQLRIRKENLTRLFEKM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EALGFMRNQHFEVPFIAFYRKEYVEPELHINDLWRVWQWDEKWTQLRIRKENLTRLFEKM
370 380 390 400 410 420
430 440 450 460 470 480
pF1KA0 QAYQYEQISADPDKPLADGIRALDTTDMERLKDVQSMDELKDVYNHFLLYYGRDIPKMQN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QAYQYEQISADPDKPLADGIRALDTTDMERLKDVQSMDELKDVYNHFLLYYGRDIPKMQN
430 440 450 460 470 480
490 500 510 520 530 540
pF1KA0 AAKASRKKLKRVREEGDEEGEGDEAEDEEQRGPELKQASRRDMYTICQSAGLDGLAKKFG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AAKASRKKLKRVREEGDEEGEGDEAEDEEQRGPELKQASRRDMYTICQSAGLDGLAKKFG
490 500 510 520 530 540
550 560 570 580 590 600
pF1KA0 LTPEQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPTPEAVLEGARYMVALQIAREP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LTPEQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPTPEAVLEGARYMVALQIAREP
550 560 570 580 590 600
610 620 630 640 650 660
pF1KA0 LVRQVLRQTFQERAKLNITPTKKGRKDVDEAHYAYSFKYLKNKPVKELRDDQFLKICLAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LVRQVLRQTFQERAKLNITPTKKGRKDVDEAHYAYSFKYLKNKPVKELRDDQFLKICLAE
610 620 630 640 650 660
670 680 690 700 710 720
pF1KA0 DEGLLTTDISIDLKGVEGYGNDQTYFEEIKQFYYRDEFSHQVQEWNRQRTMAIERALQQF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DEGLLTTDISIDLKGVEGYGNDQTYFEEIKQFYYRDEFSHQVQEWNRQRTMAIERALQQF
670 680 690 700 710 720
730 740 750 760 770 780
pF1KA0 LYVQMAKELKNKLLAEAKEYVIKACSRKLYNWLRVAPYRPDQQVEEDDDFMDENQGKGIR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LYVQMAKELKNKLLAEAKEYVIKACSRKLYNWLRVAPYRPDQQVEEDDDFMDENQGKGIR
730 740 750 760 770 780
790 800 810 820 830 840
pF1KA0 VLGIAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRTAWREEEREKKAQDIETLKKFL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VLGIAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRTAWREEEREKKAQDIETLKKFL
790 800 810 820 830 840
850 860 870 880 890 900
pF1KA0 LNKKPHVVTVAGENRDAQMLIEDVKRIVHELDQGQQLSSIGVELVDNELAILYMNSKKSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LNKKPHVVTVAGENRDAQMLIEDVKRIVHELDQGQQLSSIGVELVDNELAILYMNSKKSE
850 860 870 880 890 900
910 920 930 940 950 960
pF1KA0 AEFRDYPPVLRQAVSLARRIQDPLIEFAQVCSSDEDILCLKFHPLQEHVVKEELLNALYC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AEFRDYPPVLRQAVSLARRIQDPLIEFAQVCSSDEDILCLKFHPLQEHVVKEELLNALYC
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KA0 EFINRVNEVGVDVNRAIAHPYSQALIQYVCGLGPRKGTHLLKILKQNNTRLESRTQLVTM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EFINRVNEVGVDVNRAIAHPYSQALIQYVCGLGPRKGTHLLKILKQNNTRLESRTQLVTM
970 980 990 1000 1010 1020
1030 1040 1050 1060 1070 1080
pF1KA0 CHMGPKVFMNCAGFLKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CHMGPKVFMNCAGFLKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESA
1030 1040 1050 1060 1070 1080
1090 1100 1110 1120 1130 1140
pF1KA0 EDANPAGALEEILENPERLKDLDLDAFAEELERQGYGDKHITLYDIRAELSCRYKDLRTA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EDANPAGALEEILENPERLKDLDLDAFAEELERQGYGDKHITLYDIRAELSCRYKDLRTA
1090 1100 1110 1120 1130 1140
1150 1160 1170 1180 1190 1200
pF1KA0 YRSPNTEEIFNMLTKETPETFYIGKLIICNVTGIAHRRPQGESYDQAIRNDETGLWQCPF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YRSPNTEEIFNMLTKETPETFYIGKLIICNVTGIAHRRPQGESYDQAIRNDETGLWQCPF
1150 1160 1170 1180 1190 1200
1210 1220 1230 1240 1250 1260
pF1KA0 CQQDNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVTGFIPTKFLSDKVVKRPEERVKVG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CQQDNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVTGFIPTKFLSDKVVKRPEERVKVG
1210 1220 1230 1240 1250 1260
1270 1280 1290 1300 1310 1320
pF1KA0 MTVHCRIMKIDIEKFSADLTCRTSDLMDRNNEWKLPKDTYYDFDAEAADHKQEEDMKRKQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MTVHCRIMKIDIEKFSADLTCRTSDLMDRNNEWKLPKDTYYDFDAEAADHKQEEDMKRKQ
1270 1280 1290 1300 1310 1320
1330 1340 1350 1360 1370 1380
pF1KA0 QRTTYIKRVIAHPSFHNINFKQAEKMMETMDQGDVIIRPSSKGENHLTVTWKVSDGIYQH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QRTTYIKRVIAHPSFHNINFKQAEKMMETMDQGDVIIRPSSKGENHLTVTWKVSDGIYQH
1330 1340 1350 1360 1370 1380
1390 1400 1410 1420 1430 1440
pF1KA0 VDVREEGKENAFSLGATLWINSEEFEDLDEIVARYVQPMASFARDLLNHKYYQDCSGGDR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VDVREEGKENAFSLGATLWINSEEFEDLDEIVARYVQPMASFARDLLNHKYYQDCSGGDR
1390 1400 1410 1420 1430 1440
1450 1460 1470 1480 1490 1500
pF1KA0 KKLEELLIKTKKEKPTFIPYFICACKELPGKFLLGYQPRGKPRIEYVTVTPEGFRYRGQI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KKLEELLIKTKKEKPTFIPYFICACKELPGKFLLGYQPRGKPRIEYVTVTPEGFRYRGQI
1450 1460 1470 1480 1490 1500
1510 1520 1530 1540 1550 1560
pF1KA0 FPTVNGLFRWFKDHYQDPVPGITPSSSSRTRTPASINATPANINLADLTRAVNALPQNMT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FPTVNGLFRWFKDHYQDPVPGITPSSSSRTRTPASINATPANINLADLTRAVNALPQNMT
1510 1520 1530 1540 1550 1560
1570 1580 1590 1600 1610 1620
pF1KA0 SQMFSAIAAVTGQGQNPNATPAQWASSQYGYGGSGGGSSAYHVFPTPAQQPVATPLMTPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SQMFSAIAAVTGQGQNPNATPAQWASSQYGYGGSGGGSSAYHVFPTPAQQPVATPLMTPS
1570 1580 1590 1600 1610 1620
1630 1640 1650 1660 1670 1680
pF1KA0 YSYTTPSQPITTPQYHQLQASTTPQSAQAQPQPSSSSRQRQQQPKSNSHAAIDWGKMAEQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YSYTTPSQPITTPQYHQLQASTTPQSAQAQPQPSSSSRQRQQQPKSNSHAAIDWGKMAEQ
1630 1640 1650 1660 1670 1680
1690 1700 1710 1720
pF1KA0 WLQEKEAERRKQKQRLTPRPSPSPMIESTPMSIAGDATPLLDEMDR
::::::::::::::::::::::::::::::::::::::::::::::
XP_016 WLQEKEAERRKQKQRLTPRPSPSPMIESTPMSIAGDATPLLDEMDR
1690 1700 1710 1720
>>XP_016880468 (OMIM: 601333) PREDICTED: transcription e (1726 aa)
initn: 11614 init1: 11614 opt: 11614 Z-score: 6743.4 bits: 1260.8 E(85289): 0
Smith-Waterman score: 11614; 100.0% identity (100.0% similar) in 1726 aa overlap (1-1726:1-1726)
10 20 30 40 50 60
pF1KA0 MSDFVESEAEESEEEYNDEGEVVPRVTKKFVEEEDDDEEEEEENLDDQDEQGNLKGFIND
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MSDFVESEAEESEEEYNDEGEVVPRVTKKFVEEEDDDEEEEEENLDDQDEQGNLKGFIND
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 DDDEDEGEEDEGSDSGDSEDDVGHKKRKRTSFDDRLEDDDFDLIEENLGVKVKRGQKYRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DDDEDEGEEDEGSDSGDSEDDVGHKKRKRTSFDDRLEDDDFDLIEENLGVKVKRGQKYRR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA0 VKKMSDDEDDDEEEYGKEEHEKEAIAEEIFQDGEGEEGQEAMEAPMAPPEEEEEDDEESD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VKKMSDDEDDDEEEYGKEEHEKEAIAEEIFQDGEGEEGQEAMEAPMAPPEEEEEDDEESD
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA0 IDDFIVDDDGQPLKKPKWRKKLPGYTDAALQEAQEIFGVDFDYDEFEKYNEYDEELEEEY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IDDFIVDDDGQPLKKPKWRKKLPGYTDAALQEAQEIFGVDFDYDEFEKYNEYDEELEEEY
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA0 EYEDDEAEGEIRVRPKKTTKKRVSRRSIFEMYEPSELESSHLTDQDNEIRATDLPERFQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EYEDDEAEGEIRVRPKKTTKKRVSRRSIFEMYEPSELESSHLTDQDNEIRATDLPERFQL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA0 RSIPVKGAEDDELEEEADWIYRNAFATPTISLQESCDYLDRGQPASSFSRKGPSTIQKIK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RSIPVKGAEDDELEEEADWIYRNAFATPTISLQESCDYLDRGQPASSFSRKGPSTIQKIK
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA0 EALGFMRNQHFEVPFIAFYRKEYVEPELHINDLWRVWQWDEKWTQLRIRKENLTRLFEKM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EALGFMRNQHFEVPFIAFYRKEYVEPELHINDLWRVWQWDEKWTQLRIRKENLTRLFEKM
370 380 390 400 410 420
430 440 450 460 470 480
pF1KA0 QAYQYEQISADPDKPLADGIRALDTTDMERLKDVQSMDELKDVYNHFLLYYGRDIPKMQN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QAYQYEQISADPDKPLADGIRALDTTDMERLKDVQSMDELKDVYNHFLLYYGRDIPKMQN
430 440 450 460 470 480
490 500 510 520 530 540
pF1KA0 AAKASRKKLKRVREEGDEEGEGDEAEDEEQRGPELKQASRRDMYTICQSAGLDGLAKKFG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AAKASRKKLKRVREEGDEEGEGDEAEDEEQRGPELKQASRRDMYTICQSAGLDGLAKKFG
490 500 510 520 530 540
550 560 570 580 590 600
pF1KA0 LTPEQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPTPEAVLEGARYMVALQIAREP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LTPEQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPTPEAVLEGARYMVALQIAREP
550 560 570 580 590 600
610 620 630 640 650 660
pF1KA0 LVRQVLRQTFQERAKLNITPTKKGRKDVDEAHYAYSFKYLKNKPVKELRDDQFLKICLAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LVRQVLRQTFQERAKLNITPTKKGRKDVDEAHYAYSFKYLKNKPVKELRDDQFLKICLAE
610 620 630 640 650 660
670 680 690 700 710 720
pF1KA0 DEGLLTTDISIDLKGVEGYGNDQTYFEEIKQFYYRDEFSHQVQEWNRQRTMAIERALQQF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DEGLLTTDISIDLKGVEGYGNDQTYFEEIKQFYYRDEFSHQVQEWNRQRTMAIERALQQF
670 680 690 700 710 720
730 740 750 760 770 780
pF1KA0 LYVQMAKELKNKLLAEAKEYVIKACSRKLYNWLRVAPYRPDQQVEEDDDFMDENQGKGIR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LYVQMAKELKNKLLAEAKEYVIKACSRKLYNWLRVAPYRPDQQVEEDDDFMDENQGKGIR
730 740 750 760 770 780
790 800 810 820 830 840
pF1KA0 VLGIAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRTAWREEEREKKAQDIETLKKFL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VLGIAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRTAWREEEREKKAQDIETLKKFL
790 800 810 820 830 840
850 860 870 880 890 900
pF1KA0 LNKKPHVVTVAGENRDAQMLIEDVKRIVHELDQGQQLSSIGVELVDNELAILYMNSKKSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LNKKPHVVTVAGENRDAQMLIEDVKRIVHELDQGQQLSSIGVELVDNELAILYMNSKKSE
850 860 870 880 890 900
910 920 930 940 950 960
pF1KA0 AEFRDYPPVLRQAVSLARRIQDPLIEFAQVCSSDEDILCLKFHPLQEHVVKEELLNALYC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AEFRDYPPVLRQAVSLARRIQDPLIEFAQVCSSDEDILCLKFHPLQEHVVKEELLNALYC
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KA0 EFINRVNEVGVDVNRAIAHPYSQALIQYVCGLGPRKGTHLLKILKQNNTRLESRTQLVTM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EFINRVNEVGVDVNRAIAHPYSQALIQYVCGLGPRKGTHLLKILKQNNTRLESRTQLVTM
970 980 990 1000 1010 1020
1030 1040 1050 1060 1070 1080
pF1KA0 CHMGPKVFMNCAGFLKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CHMGPKVFMNCAGFLKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESA
1030 1040 1050 1060 1070 1080
1090 1100 1110 1120 1130 1140
pF1KA0 EDANPAGALEEILENPERLKDLDLDAFAEELERQGYGDKHITLYDIRAELSCRYKDLRTA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EDANPAGALEEILENPERLKDLDLDAFAEELERQGYGDKHITLYDIRAELSCRYKDLRTA
1090 1100 1110 1120 1130 1140
1150 1160 1170 1180 1190 1200
pF1KA0 YRSPNTEEIFNMLTKETPETFYIGKLIICNVTGIAHRRPQGESYDQAIRNDETGLWQCPF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YRSPNTEEIFNMLTKETPETFYIGKLIICNVTGIAHRRPQGESYDQAIRNDETGLWQCPF
1150 1160 1170 1180 1190 1200
1210 1220 1230 1240 1250 1260
pF1KA0 CQQDNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVTGFIPTKFLSDKVVKRPEERVKVG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CQQDNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVTGFIPTKFLSDKVVKRPEERVKVG
1210 1220 1230 1240 1250 1260
1270 1280 1290 1300 1310 1320
pF1KA0 MTVHCRIMKIDIEKFSADLTCRTSDLMDRNNEWKLPKDTYYDFDAEAADHKQEEDMKRKQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MTVHCRIMKIDIEKFSADLTCRTSDLMDRNNEWKLPKDTYYDFDAEAADHKQEEDMKRKQ
1270 1280 1290 1300 1310 1320
1330 1340 1350 1360 1370 1380
pF1KA0 QRTTYIKRVIAHPSFHNINFKQAEKMMETMDQGDVIIRPSSKGENHLTVTWKVSDGIYQH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QRTTYIKRVIAHPSFHNINFKQAEKMMETMDQGDVIIRPSSKGENHLTVTWKVSDGIYQH
1330 1340 1350 1360 1370 1380
1390 1400 1410 1420 1430 1440
pF1KA0 VDVREEGKENAFSLGATLWINSEEFEDLDEIVARYVQPMASFARDLLNHKYYQDCSGGDR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VDVREEGKENAFSLGATLWINSEEFEDLDEIVARYVQPMASFARDLLNHKYYQDCSGGDR
1390 1400 1410 1420 1430 1440
1450 1460 1470 1480 1490 1500
pF1KA0 KKLEELLIKTKKEKPTFIPYFICACKELPGKFLLGYQPRGKPRIEYVTVTPEGFRYRGQI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KKLEELLIKTKKEKPTFIPYFICACKELPGKFLLGYQPRGKPRIEYVTVTPEGFRYRGQI
1450 1460 1470 1480 1490 1500
1510 1520 1530 1540 1550 1560
pF1KA0 FPTVNGLFRWFKDHYQDPVPGITPSSSSRTRTPASINATPANINLADLTRAVNALPQNMT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FPTVNGLFRWFKDHYQDPVPGITPSSSSRTRTPASINATPANINLADLTRAVNALPQNMT
1510 1520 1530 1540 1550 1560
1570 1580 1590 1600 1610 1620
pF1KA0 SQMFSAIAAVTGQGQNPNATPAQWASSQYGYGGSGGGSSAYHVFPTPAQQPVATPLMTPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SQMFSAIAAVTGQGQNPNATPAQWASSQYGYGGSGGGSSAYHVFPTPAQQPVATPLMTPS
1570 1580 1590 1600 1610 1620
1630 1640 1650 1660 1670 1680
pF1KA0 YSYTTPSQPITTPQYHQLQASTTPQSAQAQPQPSSSSRQRQQQPKSNSHAAIDWGKMAEQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YSYTTPSQPITTPQYHQLQASTTPQSAQAQPQPSSSSRQRQQQPKSNSHAAIDWGKMAEQ
1630 1640 1650 1660 1670 1680
1690 1700 1710 1720
pF1KA0 WLQEKEAERRKQKQRLTPRPSPSPMIESTPMSIAGDATPLLDEMDR
::::::::::::::::::::::::::::::::::::::::::::::
XP_016 WLQEKEAERRKQKQRLTPRPSPSPMIESTPMSIAGDATPLLDEMDR
1690 1700 1710 1720
>>NP_003161 (OMIM: 601333) transcription elongation fact (1726 aa)
initn: 11614 init1: 11614 opt: 11614 Z-score: 6743.4 bits: 1260.8 E(85289): 0
Smith-Waterman score: 11614; 100.0% identity (100.0% similar) in 1726 aa overlap (1-1726:1-1726)
10 20 30 40 50 60
pF1KA0 MSDFVESEAEESEEEYNDEGEVVPRVTKKFVEEEDDDEEEEEENLDDQDEQGNLKGFIND
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 MSDFVESEAEESEEEYNDEGEVVPRVTKKFVEEEDDDEEEEEENLDDQDEQGNLKGFIND
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 DDDEDEGEEDEGSDSGDSEDDVGHKKRKRTSFDDRLEDDDFDLIEENLGVKVKRGQKYRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 DDDEDEGEEDEGSDSGDSEDDVGHKKRKRTSFDDRLEDDDFDLIEENLGVKVKRGQKYRR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA0 VKKMSDDEDDDEEEYGKEEHEKEAIAEEIFQDGEGEEGQEAMEAPMAPPEEEEEDDEESD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 VKKMSDDEDDDEEEYGKEEHEKEAIAEEIFQDGEGEEGQEAMEAPMAPPEEEEEDDEESD
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA0 IDDFIVDDDGQPLKKPKWRKKLPGYTDAALQEAQEIFGVDFDYDEFEKYNEYDEELEEEY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 IDDFIVDDDGQPLKKPKWRKKLPGYTDAALQEAQEIFGVDFDYDEFEKYNEYDEELEEEY
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA0 EYEDDEAEGEIRVRPKKTTKKRVSRRSIFEMYEPSELESSHLTDQDNEIRATDLPERFQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 EYEDDEAEGEIRVRPKKTTKKRVSRRSIFEMYEPSELESSHLTDQDNEIRATDLPERFQL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA0 RSIPVKGAEDDELEEEADWIYRNAFATPTISLQESCDYLDRGQPASSFSRKGPSTIQKIK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 RSIPVKGAEDDELEEEADWIYRNAFATPTISLQESCDYLDRGQPASSFSRKGPSTIQKIK
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA0 EALGFMRNQHFEVPFIAFYRKEYVEPELHINDLWRVWQWDEKWTQLRIRKENLTRLFEKM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 EALGFMRNQHFEVPFIAFYRKEYVEPELHINDLWRVWQWDEKWTQLRIRKENLTRLFEKM
370 380 390 400 410 420
430 440 450 460 470 480
pF1KA0 QAYQYEQISADPDKPLADGIRALDTTDMERLKDVQSMDELKDVYNHFLLYYGRDIPKMQN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 QAYQYEQISADPDKPLADGIRALDTTDMERLKDVQSMDELKDVYNHFLLYYGRDIPKMQN
430 440 450 460 470 480
490 500 510 520 530 540
pF1KA0 AAKASRKKLKRVREEGDEEGEGDEAEDEEQRGPELKQASRRDMYTICQSAGLDGLAKKFG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 AAKASRKKLKRVREEGDEEGEGDEAEDEEQRGPELKQASRRDMYTICQSAGLDGLAKKFG
490 500 510 520 530 540
550 560 570 580 590 600
pF1KA0 LTPEQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPTPEAVLEGARYMVALQIAREP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 LTPEQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPTPEAVLEGARYMVALQIAREP
550 560 570 580 590 600
610 620 630 640 650 660
pF1KA0 LVRQVLRQTFQERAKLNITPTKKGRKDVDEAHYAYSFKYLKNKPVKELRDDQFLKICLAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 LVRQVLRQTFQERAKLNITPTKKGRKDVDEAHYAYSFKYLKNKPVKELRDDQFLKICLAE
610 620 630 640 650 660
670 680 690 700 710 720
pF1KA0 DEGLLTTDISIDLKGVEGYGNDQTYFEEIKQFYYRDEFSHQVQEWNRQRTMAIERALQQF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 DEGLLTTDISIDLKGVEGYGNDQTYFEEIKQFYYRDEFSHQVQEWNRQRTMAIERALQQF
670 680 690 700 710 720
730 740 750 760 770 780
pF1KA0 LYVQMAKELKNKLLAEAKEYVIKACSRKLYNWLRVAPYRPDQQVEEDDDFMDENQGKGIR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 LYVQMAKELKNKLLAEAKEYVIKACSRKLYNWLRVAPYRPDQQVEEDDDFMDENQGKGIR
730 740 750 760 770 780
790 800 810 820 830 840
pF1KA0 VLGIAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRTAWREEEREKKAQDIETLKKFL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 VLGIAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRTAWREEEREKKAQDIETLKKFL
790 800 810 820 830 840
850 860 870 880 890 900
pF1KA0 LNKKPHVVTVAGENRDAQMLIEDVKRIVHELDQGQQLSSIGVELVDNELAILYMNSKKSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 LNKKPHVVTVAGENRDAQMLIEDVKRIVHELDQGQQLSSIGVELVDNELAILYMNSKKSE
850 860 870 880 890 900
910 920 930 940 950 960
pF1KA0 AEFRDYPPVLRQAVSLARRIQDPLIEFAQVCSSDEDILCLKFHPLQEHVVKEELLNALYC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 AEFRDYPPVLRQAVSLARRIQDPLIEFAQVCSSDEDILCLKFHPLQEHVVKEELLNALYC
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KA0 EFINRVNEVGVDVNRAIAHPYSQALIQYVCGLGPRKGTHLLKILKQNNTRLESRTQLVTM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 EFINRVNEVGVDVNRAIAHPYSQALIQYVCGLGPRKGTHLLKILKQNNTRLESRTQLVTM
970 980 990 1000 1010 1020
1030 1040 1050 1060 1070 1080
pF1KA0 CHMGPKVFMNCAGFLKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 CHMGPKVFMNCAGFLKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESA
1030 1040 1050 1060 1070 1080
1090 1100 1110 1120 1130 1140
pF1KA0 EDANPAGALEEILENPERLKDLDLDAFAEELERQGYGDKHITLYDIRAELSCRYKDLRTA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 EDANPAGALEEILENPERLKDLDLDAFAEELERQGYGDKHITLYDIRAELSCRYKDLRTA
1090 1100 1110 1120 1130 1140
1150 1160 1170 1180 1190 1200
pF1KA0 YRSPNTEEIFNMLTKETPETFYIGKLIICNVTGIAHRRPQGESYDQAIRNDETGLWQCPF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 YRSPNTEEIFNMLTKETPETFYIGKLIICNVTGIAHRRPQGESYDQAIRNDETGLWQCPF
1150 1160 1170 1180 1190 1200
1210 1220 1230 1240 1250 1260
pF1KA0 CQQDNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVTGFIPTKFLSDKVVKRPEERVKVG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 CQQDNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVTGFIPTKFLSDKVVKRPEERVKVG
1210 1220 1230 1240 1250 1260
1270 1280 1290 1300 1310 1320
pF1KA0 MTVHCRIMKIDIEKFSADLTCRTSDLMDRNNEWKLPKDTYYDFDAEAADHKQEEDMKRKQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 MTVHCRIMKIDIEKFSADLTCRTSDLMDRNNEWKLPKDTYYDFDAEAADHKQEEDMKRKQ
1270 1280 1290 1300 1310 1320
1330 1340 1350 1360 1370 1380
pF1KA0 QRTTYIKRVIAHPSFHNINFKQAEKMMETMDQGDVIIRPSSKGENHLTVTWKVSDGIYQH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 QRTTYIKRVIAHPSFHNINFKQAEKMMETMDQGDVIIRPSSKGENHLTVTWKVSDGIYQH
1330 1340 1350 1360 1370 1380
1390 1400 1410 1420 1430 1440
pF1KA0 VDVREEGKENAFSLGATLWINSEEFEDLDEIVARYVQPMASFARDLLNHKYYQDCSGGDR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 VDVREEGKENAFSLGATLWINSEEFEDLDEIVARYVQPMASFARDLLNHKYYQDCSGGDR
1390 1400 1410 1420 1430 1440
1450 1460 1470 1480 1490 1500
pF1KA0 KKLEELLIKTKKEKPTFIPYFICACKELPGKFLLGYQPRGKPRIEYVTVTPEGFRYRGQI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 KKLEELLIKTKKEKPTFIPYFICACKELPGKFLLGYQPRGKPRIEYVTVTPEGFRYRGQI
1450 1460 1470 1480 1490 1500
1510 1520 1530 1540 1550 1560
pF1KA0 FPTVNGLFRWFKDHYQDPVPGITPSSSSRTRTPASINATPANINLADLTRAVNALPQNMT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 FPTVNGLFRWFKDHYQDPVPGITPSSSSRTRTPASINATPANINLADLTRAVNALPQNMT
1510 1520 1530 1540 1550 1560
1570 1580 1590 1600 1610 1620
pF1KA0 SQMFSAIAAVTGQGQNPNATPAQWASSQYGYGGSGGGSSAYHVFPTPAQQPVATPLMTPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 SQMFSAIAAVTGQGQNPNATPAQWASSQYGYGGSGGGSSAYHVFPTPAQQPVATPLMTPS
1570 1580 1590 1600 1610 1620
1630 1640 1650 1660 1670 1680
pF1KA0 YSYTTPSQPITTPQYHQLQASTTPQSAQAQPQPSSSSRQRQQQPKSNSHAAIDWGKMAEQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 YSYTTPSQPITTPQYHQLQASTTPQSAQAQPQPSSSSRQRQQQPKSNSHAAIDWGKMAEQ
1630 1640 1650 1660 1670 1680
1690 1700 1710 1720
pF1KA0 WLQEKEAERRKQKQRLTPRPSPSPMIESTPMSIAGDATPLLDEMDR
::::::::::::::::::::::::::::::::::::::::::::::
NP_003 WLQEKEAERRKQKQRLTPRPSPSPMIESTPMSIAGDATPLLDEMDR
1690 1700 1710 1720
>>XP_016880469 (OMIM: 601333) PREDICTED: transcription e (1603 aa)
initn: 10798 init1: 10798 opt: 10798 Z-score: 6271.0 bits: 1173.3 E(85289): 0
Smith-Waterman score: 10798; 100.0% identity (100.0% similar) in 1603 aa overlap (124-1726:1-1603)
100 110 120 130 140 150
pF1KA0 DRLEDDDFDLIEENLGVKVKRGQKYRRVKKMSDDEDDDEEEYGKEEHEKEAIAEEIFQDG
::::::::::::::::::::::::::::::
XP_016 MSDDEDDDEEEYGKEEHEKEAIAEEIFQDG
10 20 30
160 170 180 190 200 210
pF1KA0 EGEEGQEAMEAPMAPPEEEEEDDEESDIDDFIVDDDGQPLKKPKWRKKLPGYTDAALQEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EGEEGQEAMEAPMAPPEEEEEDDEESDIDDFIVDDDGQPLKKPKWRKKLPGYTDAALQEA
40 50 60 70 80 90
220 230 240 250 260 270
pF1KA0 QEIFGVDFDYDEFEKYNEYDEELEEEYEYEDDEAEGEIRVRPKKTTKKRVSRRSIFEMYE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QEIFGVDFDYDEFEKYNEYDEELEEEYEYEDDEAEGEIRVRPKKTTKKRVSRRSIFEMYE
100 110 120 130 140 150
280 290 300 310 320 330
pF1KA0 PSELESSHLTDQDNEIRATDLPERFQLRSIPVKGAEDDELEEEADWIYRNAFATPTISLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PSELESSHLTDQDNEIRATDLPERFQLRSIPVKGAEDDELEEEADWIYRNAFATPTISLQ
160 170 180 190 200 210
340 350 360 370 380 390
pF1KA0 ESCDYLDRGQPASSFSRKGPSTIQKIKEALGFMRNQHFEVPFIAFYRKEYVEPELHINDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ESCDYLDRGQPASSFSRKGPSTIQKIKEALGFMRNQHFEVPFIAFYRKEYVEPELHINDL
220 230 240 250 260 270
400 410 420 430 440 450
pF1KA0 WRVWQWDEKWTQLRIRKENLTRLFEKMQAYQYEQISADPDKPLADGIRALDTTDMERLKD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 WRVWQWDEKWTQLRIRKENLTRLFEKMQAYQYEQISADPDKPLADGIRALDTTDMERLKD
280 290 300 310 320 330
460 470 480 490 500 510
pF1KA0 VQSMDELKDVYNHFLLYYGRDIPKMQNAAKASRKKLKRVREEGDEEGEGDEAEDEEQRGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VQSMDELKDVYNHFLLYYGRDIPKMQNAAKASRKKLKRVREEGDEEGEGDEAEDEEQRGP
340 350 360 370 380 390
520 530 540 550 560 570
pF1KA0 ELKQASRRDMYTICQSAGLDGLAKKFGLTPEQFGENLRDSYQRHETEQFPAEPLELAKDY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ELKQASRRDMYTICQSAGLDGLAKKFGLTPEQFGENLRDSYQRHETEQFPAEPLELAKDY
400 410 420 430 440 450
580 590 600 610 620 630
pF1KA0 VCSQFPTPEAVLEGARYMVALQIAREPLVRQVLRQTFQERAKLNITPTKKGRKDVDEAHY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VCSQFPTPEAVLEGARYMVALQIAREPLVRQVLRQTFQERAKLNITPTKKGRKDVDEAHY
460 470 480 490 500 510
640 650 660 670 680 690
pF1KA0 AYSFKYLKNKPVKELRDDQFLKICLAEDEGLLTTDISIDLKGVEGYGNDQTYFEEIKQFY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AYSFKYLKNKPVKELRDDQFLKICLAEDEGLLTTDISIDLKGVEGYGNDQTYFEEIKQFY
520 530 540 550 560 570
700 710 720 730 740 750
pF1KA0 YRDEFSHQVQEWNRQRTMAIERALQQFLYVQMAKELKNKLLAEAKEYVIKACSRKLYNWL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YRDEFSHQVQEWNRQRTMAIERALQQFLYVQMAKELKNKLLAEAKEYVIKACSRKLYNWL
580 590 600 610 620 630
760 770 780 790 800 810
pF1KA0 RVAPYRPDQQVEEDDDFMDENQGKGIRVLGIAFSSARDHPVFCALVNGEGEVTDFLRLPH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RVAPYRPDQQVEEDDDFMDENQGKGIRVLGIAFSSARDHPVFCALVNGEGEVTDFLRLPH
640 650 660 670 680 690
820 830 840 850 860 870
pF1KA0 FTKRRTAWREEEREKKAQDIETLKKFLLNKKPHVVTVAGENRDAQMLIEDVKRIVHELDQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FTKRRTAWREEEREKKAQDIETLKKFLLNKKPHVVTVAGENRDAQMLIEDVKRIVHELDQ
700 710 720 730 740 750
880 890 900 910 920 930
pF1KA0 GQQLSSIGVELVDNELAILYMNSKKSEAEFRDYPPVLRQAVSLARRIQDPLIEFAQVCSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GQQLSSIGVELVDNELAILYMNSKKSEAEFRDYPPVLRQAVSLARRIQDPLIEFAQVCSS
760 770 780 790 800 810
940 950 960 970 980 990
pF1KA0 DEDILCLKFHPLQEHVVKEELLNALYCEFINRVNEVGVDVNRAIAHPYSQALIQYVCGLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DEDILCLKFHPLQEHVVKEELLNALYCEFINRVNEVGVDVNRAIAHPYSQALIQYVCGLG
820 830 840 850 860 870
1000 1010 1020 1030 1040 1050
pF1KA0 PRKGTHLLKILKQNNTRLESRTQLVTMCHMGPKVFMNCAGFLKIDTASLGDSTDSYIEVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PRKGTHLLKILKQNNTRLESRTQLVTMCHMGPKVFMNCAGFLKIDTASLGDSTDSYIEVL
880 890 900 910 920 930
1060 1070 1080 1090 1100 1110
pF1KA0 DGSRVHPETYEWARKMAVDALEYDESAEDANPAGALEEILENPERLKDLDLDAFAEELER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DGSRVHPETYEWARKMAVDALEYDESAEDANPAGALEEILENPERLKDLDLDAFAEELER
940 950 960 970 980 990
1120 1130 1140 1150 1160 1170
pF1KA0 QGYGDKHITLYDIRAELSCRYKDLRTAYRSPNTEEIFNMLTKETPETFYIGKLIICNVTG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QGYGDKHITLYDIRAELSCRYKDLRTAYRSPNTEEIFNMLTKETPETFYIGKLIICNVTG
1000 1010 1020 1030 1040 1050
1180 1190 1200 1210 1220 1230
pF1KA0 IAHRRPQGESYDQAIRNDETGLWQCPFCQQDNFPELSEVWNHFDSGSCPGQAIGVKTRLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IAHRRPQGESYDQAIRNDETGLWQCPFCQQDNFPELSEVWNHFDSGSCPGQAIGVKTRLD
1060 1070 1080 1090 1100 1110
1240 1250 1260 1270 1280 1290
pF1KA0 NGVTGFIPTKFLSDKVVKRPEERVKVGMTVHCRIMKIDIEKFSADLTCRTSDLMDRNNEW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NGVTGFIPTKFLSDKVVKRPEERVKVGMTVHCRIMKIDIEKFSADLTCRTSDLMDRNNEW
1120 1130 1140 1150 1160 1170
1300 1310 1320 1330 1340 1350
pF1KA0 KLPKDTYYDFDAEAADHKQEEDMKRKQQRTTYIKRVIAHPSFHNINFKQAEKMMETMDQG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KLPKDTYYDFDAEAADHKQEEDMKRKQQRTTYIKRVIAHPSFHNINFKQAEKMMETMDQG
1180 1190 1200 1210 1220 1230
1360 1370 1380 1390 1400 1410
pF1KA0 DVIIRPSSKGENHLTVTWKVSDGIYQHVDVREEGKENAFSLGATLWINSEEFEDLDEIVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DVIIRPSSKGENHLTVTWKVSDGIYQHVDVREEGKENAFSLGATLWINSEEFEDLDEIVA
1240 1250 1260 1270 1280 1290
1420 1430 1440 1450 1460 1470
pF1KA0 RYVQPMASFARDLLNHKYYQDCSGGDRKKLEELLIKTKKEKPTFIPYFICACKELPGKFL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RYVQPMASFARDLLNHKYYQDCSGGDRKKLEELLIKTKKEKPTFIPYFICACKELPGKFL
1300 1310 1320 1330 1340 1350
1480 1490 1500 1510 1520 1530
pF1KA0 LGYQPRGKPRIEYVTVTPEGFRYRGQIFPTVNGLFRWFKDHYQDPVPGITPSSSSRTRTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LGYQPRGKPRIEYVTVTPEGFRYRGQIFPTVNGLFRWFKDHYQDPVPGITPSSSSRTRTP
1360 1370 1380 1390 1400 1410
1540 1550 1560 1570 1580 1590
pF1KA0 ASINATPANINLADLTRAVNALPQNMTSQMFSAIAAVTGQGQNPNATPAQWASSQYGYGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ASINATPANINLADLTRAVNALPQNMTSQMFSAIAAVTGQGQNPNATPAQWASSQYGYGG
1420 1430 1440 1450 1460 1470
1600 1610 1620 1630 1640 1650
pF1KA0 SGGGSSAYHVFPTPAQQPVATPLMTPSYSYTTPSQPITTPQYHQLQASTTPQSAQAQPQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SGGGSSAYHVFPTPAQQPVATPLMTPSYSYTTPSQPITTPQYHQLQASTTPQSAQAQPQP
1480 1490 1500 1510 1520 1530
1660 1670 1680 1690 1700 1710
pF1KA0 SSSSRQRQQQPKSNSHAAIDWGKMAEQWLQEKEAERRKQKQRLTPRPSPSPMIESTPMSI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SSSSRQRQQQPKSNSHAAIDWGKMAEQWLQEKEAERRKQKQRLTPRPSPSPMIESTPMSI
1540 1550 1560 1570 1580 1590
1720
pF1KA0 AGDATPLLDEMDR
:::::::::::::
XP_016 AGDATPLLDEMDR
1600
1726 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 02:21:04 2016 done: Sat Nov 5 02:21:07 2016
Total Scan time: 20.670 Total Display time: 0.690
Function used was FASTA [36.3.4 Apr, 2011]