GENSCAN 1.0	Date run:  4-Aug-121	Time: 20:32:44

Sequence gi568815597r:93054830_93280242 : 225413 bp : 37.66% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +  12586  12753  168  1  0  111   77    39 0.010   3.24
 1.02 Intr +  24331  24606  276  1  0   61  100   204 0.000  14.61
 1.03 Intr +  55401  55540  140  0  2   55   32   162 0.181   6.49
 1.04 Intr +  59859  59954   96  1  0   66   86    82 0.324   4.86
 1.05 Intr +  60159  60259  101  1  2   24   71    56 0.686  -3.59
 1.06 Intr +  60641  60789  149  1  2   80   89   119 0.990   9.31
 1.07 Intr +  64504  64572   69  1  0  111  103    23 0.891   3.48
 1.08 Intr +  74449  74619  171  1  0   33   93   171 0.991  10.24
 1.09 Intr +  81841  82156  316  1  1   64   56   357 0.060  25.24
 1.10 Intr +  85607  85654   48  1  0   79  116    28 0.060   2.66
 1.11 Intr +  94039  94210  172  0  1   42   99    86 0.131   3.69
 1.12 Term +  96237  96337  101  1  2  127   43    35 0.328   0.21
 1.13 PlyA +  97708  97713    6                               1.05

 2.06 PlyA -  97925  97920    6                               1.05
 2.05 Term - 100059  99841  219  0  0   97   41   137 0.994   5.96
 2.04 Intr - 101654 101471  184  1  1   92   65   128 0.991   9.77
 2.03 Intr - 105397 105300   98  1  2   91  113    63 0.881   6.99
 2.02 Intr - 116413 116289  125  2  2   41   89    47 0.078  -0.52
 2.01 Init - 116595 116523   73  0  1   28  101    90 0.150   5.58
 2.00 Prom - 120146 120107   40                              -6.75

 3.03 PlyA - 121040 121035    6                               1.05
 3.02 Term - 125151 125014  138  0  0   74   45   108 0.670   2.08
 3.01 Init - 125413 125225  189  1  0   82  108   321 0.999  30.56
 3.00 Prom - 127160 127121   40                              -8.65

 4.00 Prom + 128282 128321   40                              -8.85
 4.01 Init + 128533 128666  134  0  2   47  111    97 0.729   7.56
 4.02 Intr + 129149 129317  169  2  1   89   25   111 0.958   3.93
 4.03 Intr + 131516 131674  159  1  0  105   53    97 0.983   7.16
 4.04 Intr + 137171 137277  107  1  2   72   84    75 0.991   3.59
 4.05 Intr + 138787 138915  129  1  0   57   95    64 0.874   2.89
 4.06 Intr + 147063 147219  157  0  1   80   97   138 0.583  12.99
 4.07 Intr + 150681 150802  122  2  2   61   87    74 0.927   2.97
 4.08 Intr + 152278 152569  292  1  1   99  100   241 0.980  22.61
 4.09 Intr + 155973 156097  125  2  2   60   72    23 0.609  -3.64
 4.10 Intr + 157272 157432  161  0  2   95   97   110 0.997  11.31
 4.11 Intr + 159914 160137  224  0  2   28   74   176 0.483   7.12
 4.12 Intr + 161807 161917  111  1  0   83   53    91 0.964   4.76
 4.13 Intr + 162909 163040  132  2  0   86   89    89 0.997   8.72
 4.14 Intr + 171504 171620  117  2  0   95   84    91 0.997   9.14
 4.15 Intr + 177612 177764  153  2  0   35   76   132 0.737   6.05
 4.16 Intr + 181419 181561  143  2  2   33   98   176 0.999  11.33
 4.17 Intr + 184481 184644  164  2  2   70  107   132 0.999  12.00
 4.18 Intr + 184854 185067  214  1  1   65   95   147 0.560   9.95
 4.19 Intr + 191276 191375  100  2  1   37   15   112 0.314  -2.01
 4.20 Intr + 192009 192125  117  2  0   40   99    87 0.845   4.74
 4.21 Intr + 199642 199785  144  0  0   60   58   133 0.858   7.06
 4.22 Intr + 201506 201709  204  1  0   78   23   204 0.981  11.37
 4.23 Intr + 203919 204056  138  2  0   38   88   149 0.884   9.64
 4.24 Intr + 209872 210072  201  0  0   19  106   210 0.202  14.46
 4.25 Term + 210148 210186   39  0  0   39   42    18 0.201 -11.49
 4.26 PlyA + 210637 210642    6                               1.05

 5.00 Prom + 210920 210959   40                              -4.65
 5.01 Init + 211393 212049  657  0  0   83   41   295 0.395  19.61
 5.02 Intr + 215518 215985  468  0  0   64   91   303 0.836  20.57

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597r:93054830_93280242|GENSCAN_predicted_peptide_1|602_aa
XLILCPFFALVCDQARPTSLVYITPAPLPSGFWLGQDTIKAPYKLTVWRSEGTRKESPSR
GRRARCSSALAAQSLPPRGFGELPFGTGVAPRSQNAPAVRGKPKWRGAVLKWAVFEAGVR
TLILPPTLVSKDLGLCVHMCRVPGGAGAQDSTGAGNSLVHKRSPLRRNQKTPTSLTKLSL
QDGHKAKKPACKFEEGATGSGEMVCTICQEEYSEAPNEMVICDKCGQGYHQLCHTPHIDS
SVIDSDEKWLCRQCVFATTTKRGGALKKGPNAKALQVMKQTLPYSVADLEWDAGHKTNVQ
QCYCYCGGPGEFYTFICSVCSSGPEYLKRLPLQWFMSGKEIKKKKHLFGLRIRVPPVPPN
VAFKAEKEPEGTSHEFKIKGRKASKPISDSRLSDSRKRTRTGRSWPAAIPHLRRRRGRLP
RRALQTQNSEIVKDDEGKEDYQFDELNTEILNNLADQELQLNHLKNSITSYFGAAGRIAC
GEKYRVLARRVTLDGKLISHVQENKNWTVKCKGIIRFVRATYNCLIFEHIWSAIAADPNT
YIMQCWISFTIAHVITFIKAAVDELKPETDAGIQSPSPLCPVLCNIILALDSLIGVLSPD
VH

>gi568815597r:93054830_93280242|GENSCAN_predicted_CDS_1|1809_bp
nngttgattctctgtcctttctttgccctggtctgtgaccaggcaagaccgacttctctg
gtctatattaccccagctcccttgccctctggcttctggttgggtcaagacaccataaag
gcaccttataagcttactgtatggagatcagagggcaccaggaaagaaagccccagtcgg
ggacgcagggcgcggtgttcctccgcgctcgccgcgcagtccctgcccccccgcggcttt
ggagagctgccattcggcaccggagtcgctccgcgctcccagaatgcaccggcagtccgc
gggaaaccaaaatggcgaggggctgtattgaagtgggctgtgtttgaggccggtgtaaga
acgctcattctacccccaacccttgtctccaaggacctcggtttgtgcgtgcatatgtgc
cgggtacccggtggggcgggtgcccaagactctacaggggcaggtaattcactggtccac
aagcggtctcctttacgtcgaaaccaaaagaccccaacatccttgaccaagctgtcttta
caggatggacataaagccaaaaagccagcatgtaaatttgaagagggagccactggaagt
ggggaaatggtctgtacaatatgtcaagaagagtattcagaagctcccaatgaaatggtt
atatgtgacaagtgtggccaaggatatcatcagttgtgtcacacacctcatattgattcc
agtgtgattgattcagatgaaaaatggctctgtcggcagtgtgtttttgcaacaacaaca
aagaggggtggtgcacttaagaaaggaccaaatgccaaagcattgcaagtcatgaagcag
acattaccctatagtgtggcagaccttgaatgggatgcaggtcataaaaccaatgtccag
cagtgttactgctattgtggaggccctggagaattttatacgtttatatgctctgtctgc
agttctggaccagaatacctcaaacgtctaccattacagtggtttatgtctgggaaagaa
ataaagaagaagaagcatttgtttgggttgcgaattcgtgttcctcctgtgccaccaaat
gtggctttcaaagcagagaaagaacctgaaggaacatctcatgaatttaaaattaaaggc
agaaaggcatccaaacctatatctgattcaagattatctgactccagaaaaagaacgcgt
acaggaagatcttggcctgctgcaataccacatttgcggagaagaagaggtcgtcttcca
agaagagcactccagactcagaactcagaaattgtaaaagatgatgaaggcaaagaagat
tatcagtttgatgaactcaacacagagattctgaataacttagcagatcaggagttacaa
ctcaatcatctaaagaactccattaccagttattttggtgctgcaggtagaatagcatgt
ggcgaaaaataccgagttttggcacgtcgggtgacacttgatggaaagttgatcagtcat
gttcaggaaaataaaaactggacagtgaaatgtaagggcatcattcggtttgtcagggcc
acatacaactgcctgatatttgaacacatttggtcagcaattgctgcagaccctaatacg
tatataatgcagtgctggatatcattcactattgctcatgtgataacattcatcaaagct
gcagtggatgaattaaaaccagaaacagatgcagggatccagagtccatctccattgtgc
cctgtcttatgtaacatcatcctagctctagattctttaattggtgtcctttccccagac
gtacattag

>gi568815597r:93054830_93280242|GENSCAN_predicted_peptide_2|232_aa
MFHCVRNWRVLGLTDFKNEAADPRGVKLQTFAVRVTALKVACLELFVPPGGFVVSLASGV
KLQTFVVLDGAGLDIDFHLASPEGKTLVFEQRKSDGVHTVETEVGDYMFCFDNTFSTISE
KVIFFELILDNMGEQAQEQEDWKKYITGTDILDMKLEDILESINSIKSRLSKSGHIQTLL
RAFEARDRNIQESNFDRVNFWSMVNLVVMVVVSAIQVYMLKSLFEDKRKSRT

>gi568815597r:93054830_93280242|GENSCAN_predicted_CDS_2|699_bp
atgttccactgtgtccggaattggcgggttcttggtctcactgacttcaagaatgaagcc
gcggaccctcgcggagtgaagctgcagacctttgcagtgagagttacagctcttaaggtg
gcgtgtctggagttgttcgttcctcctggtgggtttgtggtctcgctggcttcaggagtg
aagctgcagaccttcgtggttttagatggagcaggattagatattgatttccatcttgcc
tctccagaaggcaaaaccttagtttttgaacaaagaaaatcagatggagttcacactgta
gagactgaagttggtgattacatgttctgctttgacaatacattcagcaccatttctgag
aaggtgattttctttgaattaatcctggataatatgggagaacaggcacaagaacaagaa
gattggaagaaatatattactggcacagatatattggatatgaaactggaagacatcctg
gaatccatcaacagcatcaagtccagactaagcaaaagtgggcacatacaaactctgctt
agagcatttgaagctcgtgatcgaaacatacaagaaagcaactttgatagagtcaatttc
tggtctatggttaatttagtggtcatggtggtggtgtcagccattcaagtttatatgctg
aagagtctgtttgaagataagaggaaaagtagaacttaa

>gi568815597r:93054830_93280242|GENSCAN_predicted_peptide_3|108_aa
MGDKIWLPFPVLLLAALPPVLLPGAAGFTPSLDSDFTFTLPAGQKECFYQPMPLKASLEI
EYQKLLVDGPGGEEARAVQEASPLRAGARGEARLSLGPGTQNLGWTWN

>gi568815597r:93054830_93280242|GENSCAN_predicted_CDS_3|327_bp
atgggcgacaagatctggctgcccttccccgtgctccttctggccgctctgcctccggtg
ctgctgcctggggcggccggcttcacaccttccctcgatagcgacttcacctttaccctt
cccgccggccagaaggagtgcttctaccagcccatgcccctgaaggcctcgctggagatc
gagtaccaaaaacttctggtggacggccctggtggtgaagaggcgagggccgttcaggaa
gccagcccgctccgcgcaggcgcgcgaggcgaggcgaggctctcgctggggccggggacc
cagaacttaggctggacctggaattga

>gi568815597r:93054830_93280242|GENSCAN_predicted_peptide_4|1251_aa
MESSSSDYYNKDNEEESLLANVASLRHELKITEWSLQSLGEELSSVSPSENSDYAPNPSR
SEKLILDVQPSHPGLLNYSPYENVCKISGSSTDFQKKPRDKMFSSSAPVDQEIKSLREKL
NKLRQQNACLVTQNHSLMTKFESIHFELTQSRAKVSMLESAQQQAASVPILEEQIINLEA
EVSAQDKVLREAENKLEQSQKMVIEKEQSLQESKEECIKLKVDLLEQTKQGKRAERQRNE
ALYNAEELSKAFQQYKKKVAEKLEKVKGSCANSVFCITVYIPTVKVQAEEEILERNLTNC
EKENKRLQERCGLYKSELEILKEKLRQLKEENNNGKEKLRIMAVKNSEVMAQLTESRQSI
LKLESELENKDEILRDKFSLMNENRELKVRVAAQNERLDLCQQEIESSRVELRSLEKIIS
QLPLKRELFGFKSYLSKYQMSSFSNKEDRCIGCCEANKLVISELRIKLAIKEAEIQKLHA
NLTANQLSQSLITCNDSQESSKLSSLETEPVKLGGHQVAESVKDQNQHTMNKQYEKERQR
LVTGIEELRTKLIQIEAENSDLKVNMAHRTSQFQLIQEELLEKASNSSKLESEMTKKCSQ
LLTLEKQLEEKIVAYSSIAAKNAELEQELMEKNEKIRSLETNINTEHEKICLAFEKAKKI
HLEQHKEMEKQIERVRQLDSALEICKEELVLHLNQLEGNKEKFEKQLKKKSEEKELKIKN
HSLQETSEQNVILQHTLQQQQQMLQQETIRNGELEDTQTKLEKQVSKLEQELQKQRESSA
EKLRKMEEKCESAAHEADLKRQKVIELTGTARQVKIEMDQYKEELSKMEKEIMHLKRDGE
NKAMHLSQLDMILDQTKTELEKKTNAVKELEKLQHSTETELTEALQKREVLETELQNAHG
ELKSTLRQLQELRDVLQKAQLSLEEKYTTIKDLTAELRECKMEIEDKKQELLEMDQALKE
RNWELKQRAAQVTHLDMTIREHRGEMEQKIIKLEGTLEKSELELKECNKQIESLNDKLQN
AKEQLREKEFIMLQNEQEISQLKKEIERTQQRMKEMESVMKEQEQYIATQYKEAIDLGQE
LRLTREQVQNSHTELAEARHQQVQAQREIERLSSELEDMKQLSKEKDAHGNHLAEELGAS
KVREAHLEARMQAEIKKLSAEVESLKEAYHMEMISHQENHAKWKISADSQKSSVQQLNEQ
LEKAKLELEEAQDTVSNLHQQVQDRNEVIEAANEALLTKFIEDYMTKYWPV

>gi568815597r:93054830_93280242|GENSCAN_predicted_CDS_4|3756_bp
atggaatctagttcatcagactactataataaagacaatgaagaggaaagtttgcttgca
aatgttgcttccttaagacatgaactgaagataacagaatggagtttgcagagtttaggg
gaagagttatccagtgttagtccaagtgaaaattctgattatgcccctaatccttcaagg
tctgaaaagctaattttggatgttcagcctagccaccctggacttttgaattattcacct
tatgaaaacgtctgtaaaatatctggtagcagcactgattttcaaaaaaagccaagagat
aagatgttttcatcttctgcccctgtggatcaggagattaaaagccttcgagagaaacta
aataaacttaggcaacagaatgcttgtttggtcacacagaatcattccttaatgactaaa
tttgaatctattcactttgaattaacacagtcaagagcaaaagtttctatgcttgagtct
gctcaacagcaggcagccagtgtcccaatcttagaagaacagattataaatttggaagca
gaggtttcagctcaagataaagttttgagagaggcagaaaataagctggaacagagccag
aaaatggtaattgaaaaggaacagagtttgcaggagtccaaagaggaatgtataaaatta
aaggtggacttacttgaacaaaccaaacaaggaaaaagagctgaacgacaaaggaatgaa
gcactatataatgccgaagagctgagtaaagctttccaacaatataaaaaaaaagtggct
gaaaaactggaaaaggtaaaaggcagttgtgcaaattcagtgttttgtattactgtctat
attccaacagtaaaggttcaagctgaagaagaaatattagagagaaatctaactaactgt
gaaaaagaaaataaaaggctacaagaaaggtgtggtctatataaaagtgaacttgaaatt
ctgaaagagaaattaaggcagttaaaagaagaaaataacaacggaaaagaaaaattaagg
atcatggcagtgaaaaattcagaagtcatggcacaactaactgaatctagacaaagtatt
ttgaagctagagagtgagttagagaacaaagacgaaatacttagagacaaattttcttta
atgaatgaaaaccgagaattaaaggtccgtgttgcagcacagaatgagcgactagattta
tgtcaacaagaaattgaaagttcaagggtagaactaagaagtttggaaaagattatatcc
cagttgccattaaaaagagaattatttggctttaaatcatatctttctaaataccagatg
agtagcttctcaaacaaggaagaccgttgcattggctgctgtgaggcaaataaattggtg
atttcggaattgagaattaagcttgcaataaaagaggcagaaattcaaaagcttcatgca
aacctgactgcaaatcagttatctcagagtcttattacttgtaatgacagccaagaaagt
agcaaattaagtagtttagaaacagaacctgtaaagctaggtggtcatcaagtagcagaa
agcgtaaaagatcaaaatcaacatactatgaacaagcaatatgaaaaagagaggcaaaga
cttgttactggaatagaagaactacgtactaagctgatacaaatagaagctgaaaattct
gatttgaaggttaacatggctcacagaactagtcagtttcagctgattcaagaggagctg
ctagagaaagcttcaaactccagcaaactggaaagtgaaatgacaaagaaatgttctcaa
cttttaactcttgagaaacagctggaagaaaagatagttgcttattcctctattgctgca
aaaaatgcagaactagaacaggagcttatggaaaagaatgaaaagataaggagtctagaa
accaatattaatacagagcatgagaaaatttgtttagcctttgaaaaagcaaagaaaatt
cacttggaacagcataaagaaatggaaaagcagattgaaagagttaggcaactagattca
gcattggaaatttgtaaggaagaacttgtcttgcatttgaatcaattggaaggaaataag
gaaaagtttgaaaaacagttaaagaagaaatctgaagagaaagagctaaagataaaaaat
cacagtcttcaagagacttctgagcaaaacgttattctacagcatactcttcagcaacag
cagcaaatgttacaacaagagacaattagaaatggagagctagaagatactcaaactaaa
cttgaaaaacaggtgtcaaaactggaacaagaacttcaaaaacaaagggaaagttcagct
gaaaagttgagaaaaatggaggagaaatgtgaatcagctgcacatgaagcagatttgaaa
aggcaaaaagtgattgagcttactggcactgccaggcaagtaaagattgagatggatcag
tacaaagaagagctgtctaaaatggaaaaggaaataatgcacctaaaacgagatggagaa
aataaagcaatgcacctctctcaattagatatgatcttagatcagacaaagacagagcta
gaaaagaaaacaaatgctgtaaaggagttagaaaagttacagcacagtactgaaactgaa
ctaacagaagccttgcaaaaacgggaagtacttgagactgaactacaaaatgctcatgga
gaattaaaaagtactttaagacaactccaggaattgagagatgtactacagaaggctcaa
ttatcattagaggaaaaatacactactataaaggatctcacagctgaacttagagaatgc
aagatggagattgaagacaaaaagcaggagctccttgaaatggatcaggcacttaaagag
agaaattgggaactaaagcaaagagcagctcaggttacacatttggatatgactattcgt
gagcacagaggagaaatggaacaaaaaataattaaattagaaggtactctggagaaatca
gaattggaacttaaagaatgtaacaaacagatagaaagtctgaatgacaaattacaaaat
gctaaagaacagcttcgagaaaaagagtttataatgctacaaaatgaacaggagataagt
caactgaaaaaagaaattgaaagaacacaacaaaggatgaaagaaatggagagtgttatg
aaagagcaagaacagtacattgccactcagtacaaggaggccatagatttggggcaagaa
ttgaggctgacccgggagcaggtgcagaactctcatacagaattggcagaggctcgtcat
cagcaagtccaagcacagagagaaatagaaaggctctctagtgaactggaggatatgaag
caactctctaaagagaaagatgctcatggaaaccatttagctgaagaactgggggcttct
aaagtacgtgaagctcatttagaagcaagaatgcaagcagaaatcaagaaattgtcagca
gaagtagaatctctcaaagaagcttatcatatggagatgatttcacatcaagagaaccat
gcaaagtggaagatttctgctgactctcaaaagtcttctgttcagcaactaaacgaacag
ttagagaaggcaaaattggaattagaagaagctcaggatactgtaagcaatttgcatcaa
caagtccaagataggaatgaagtaattgaagctgcaaatgaagcattacttactaaattt
atagaggactatatgaccaaatattggcctgtttga

>gi568815597r:93054830_93280242|GENSCAN_predicted_peptide_5|375_aa
MKMFFETNENKDTTYQNLWDTFKAVWRGKFIALNAHKRKQERSKIDILTSQLKELEKQEQ
THSKASRRQEISKIRAELKEIETQKTLQKINESRSWFLEKINKIDRPLARLIKKKREKNQ
IEAIKNDKEDITTDPIEIQTTIREYYKHLYTNKLENLEEMDKVLDTYTLPRLNQEEVESL
SRPTTGSEIEAVINSLPTKKSPGPDRFIAEFYQRYKEELESELTRLQAKISGHEKAEDIK
FLPAPFTSPTEIMPDVQDPKFAKCFHTSFSKCTKLRRSISASDLTFKIHGDEDLSEELLQ
DLKKMQLEQPSTLEESHKNLTYTQPDSFKPLTYNLEADSSENNDFNTLSGMLRYINKEVR
LLKKSSMQTGAGLNQ

>gi568815597r:93054830_93280242|GENSCAN_predicted_CDS_5|1125_bp
atgaagatgttctttgaaaccaatgagaacaaagacacaacataccagaatctctgggac
acatttaaagcagtgtggagagggaaatttatagcactaaatgcccacaagagaaagcag
gaaagatctaaaattgacatcctgacatcacaattaaaagagctagagaagcaagagcaa
acacattcaaaagctagcagaaggcaagaaataagtaagatcagagcagaactgaaggag
atagagacacaaaaaacccttcaaaaaatcaatgaatccaggagctggtttttagaaaag
atcaacaaaattgatagaccgctagcaagactaataaagaagaaaagagagaagaatcaa
atagaggcaataaaaaatgataaagaggatatcaccactgatcccatagaaatacaaact
accatcagagaatactataaacacctctacacaaataaactagaaaacctagaagaaatg
gataaagtcctcgacacatacaccctcccaagactaaaccaggaagaagttgaatccctg
agtagaccaacaacaggttctgaaattgaggcagtaattaatagcctaccaaccaaaaaa
agtccaggaccagacagattcatagctgaattctaccagaggtacaaagaggagctggaa
tcagaattaaccagattacaggccaaaatttctggacatgaaaaggcagaagacatcaag
tttctgccagccccatttacatctccaacagaaattatgcctgatgttcaagatccaaaa
tttgctaaatgttttcacacatctttttccaagtgtacaaaattacgtcgctctattagt
gccagtgatcttactttcaaaattcatggtgatgaagatctttctgaagaattactacag
gacttaaagaaaatgcaattagaacagccttcaacattagaagaaagccataagaatctg
acttacacccagccagactcatttaaacctctcacatataacctagaagctgatagttct
gagaataatgactttaacacgcttagtgggatgctaagatacataaacaaagaagtaaga
ctattaaaaaagtcttctatgcaaacaggtgctggtttaaatcag