GENSCAN 1.0	Date run:  6-Nov-116	Time: 19:15:23

Sequence gi568815597r:84401848_84606091 : 204244 bp : 38.48% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.10 PlyA -    250    245    6                              -1.75
 1.09 Term -   1671   1603   69  0  0   92   42   127 0.349   5.46
 1.08 Intr -   2591   2317  275  0  2   63   26   285 0.230  16.13
 1.07 Intr -   4761   4719   43  0  1  105  116    -2 0.416   1.19
 1.06 Intr -  10208  10132   77  0  2   87   91    88 0.906   7.32
 1.05 Intr -  10752  10635  118  0  1   30   65    82 0.865  -0.78
 1.04 Intr -  12140  11959  182  0  2   51   73   178 0.899  11.27
 1.03 Intr -  15298  15247   52  1  1   69  127    42 0.107   3.76
 1.02 Intr -  26045  25881  165  2  0   89   85   106 0.016   9.64
 1.01 Init -  31653  31531  123  0  0   96  -39   116 0.021  -0.08
 1.00 Prom -  39191  39152   40                              -3.65

 2.00 Prom +  40496  40535   40                              -4.05
 2.01 Sngl +  42263  42598  336  1  0   52   41   261 0.966  13.58
 2.02 PlyA +  42649  42654    6                               1.05

 3.00 Prom +  46917  46956   40                              -4.35
 3.01 Init +  53823  53896   74  2  2   87   92    21 0.509   2.99
 3.02 Intr +  55364  55429   66  2  0   88   56    85 0.345   2.40
 3.03 Intr +  61480  61650  171  1  0  107   -6   106 0.511   1.24
 3.04 Term +  61855  62122  268  1  1   18   49   226 0.386   5.68
 3.05 PlyA +  63171  63176    6                               1.05

 4.00 Prom +  69896  69935   40                              -5.35
 4.01 Init +  77435  77866  432  1  0   95   39   416 0.567  33.66
 4.02 Intr +  79109  79165   57  1  0   93   94    53 0.858   4.56
 4.03 Intr +  81068  81148   81  1  0   90   80   147 0.971  13.02
 4.04 Intr +  87786  87881   96  2  0  133   49    84 0.992   8.29
 4.05 Intr +  88472  88625  154  1  1   94    7   134 0.636   4.62
 4.06 Intr +  93526  93608   83  2  2   58  115    59 0.988   4.04
 4.07 Intr +  94035  94216  182  2  2   90   94    40 0.987   2.54
 4.08 Intr +  94397  94523  127  2  1   80   95    77 0.950   7.36
 4.09 Intr + 104191 104278   88  0  1   22   72    98 0.014   0.22
 4.10 Intr + 104553 104571   19  1  1  107   94     0 0.044  -2.75
 4.11 Intr + 120543 120660  118  0  1   27  103   111 0.864   6.05
 4.12 Term + 123998 124279  282  1  0   87   43   159 0.926   5.74
 4.13 PlyA + 124427 124432    6                               1.05

 5.00 Prom + 130934 130973   40                              -2.05
 5.01 Init + 142259 142457  199  1  1   41  106    86 0.891   4.81
 5.02 Intr + 143787 143912  126  1  0   53   58    72 0.563   0.43
 5.03 Intr + 146939 147117  179  0  2  101   62   154 0.968  12.82
 5.04 Intr + 148585 148683   99  0  0   72   86    43 0.750   1.89
 5.05 Intr + 154063 154132   70  0  1   72   90    67 0.030   3.14
 5.06 Term + 159821 159924  104  0  2   53   44   102 0.010  -0.24
 5.07 PlyA + 159959 159964    6                               1.05

 6.16 PlyA - 160093 160088    6                               1.05
 6.15 Term - 160549 160535   15  1  0   99   43     1 0.352  -6.04
 6.14 Intr - 161571 161398  174  0  0   93   88   116 0.643  11.31
 6.13 Intr - 161985 161888   98  1  2   59   75    79 0.999   2.51
 6.12 Intr - 164165 163994  172  2  1   61   99   113 0.694   8.29
 6.11 Intr - 168292 168084  209  2  2   65   98   121 0.999   8.67
 6.10 Intr - 168873 168735  139  0  1   94   95   134 0.999  13.82
 6.09 Intr - 172606 172392  215  2  2   41   60   341 0.092  24.11
 6.08 Intr - 172907 172841   67  2  1   54   66    80 0.051  -0.04
 6.07 Intr - 180511 180431   81  1  0   83   74    81 0.119   5.12
 6.06 Intr - 182033 181880  154  1  1    9   86   143 0.630   5.35
 6.05 Intr - 187550 187514   37  0  1   32  115    38 0.088  -2.70
 6.04 Intr - 194688 194584  105  1  0   82  103   100 0.260  10.17
 6.03 Intr - 196249 196102  148  1  1   94   94   121 0.981  12.19
 6.02 Intr - 197435 197336  100  1  1   81   48    81 0.817   2.59
 6.01 Intr - 204148 203915  234  0  0   73   47   163 0.913   6.58

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init +  22189  22433  245  0  2   51   80   225 0.848  15.25
S.002 Term +  25871  26105  235  2  1   43   49   142 0.885   0.61
S.003 Term + 154063 154170  108  0  0   72   42   106 0.864   1.93


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597r:84401848_84606091|GENSCAN_predicted_peptide_1|367_aa
MVSFSDSAGAKPIKRGWQHRQQGASGNRALIWLLLCDLGQNSPDGKMVGLACLRSYWAEE
WTEVGCKSDFLDIGKQLACSMYQSLLGHQTLLHLTEVLQQGVTITKIYQHPYHGVTHGSG
KEFGEDTIHVSVIKDLELTEFDGLIEGSEKEEMGSDWVTMQNTRKSRFVGDDDASVQQQN
YTACCLMMVFHTVKKRIRLCKMEEFLSLGRLKCDELTENLHHTPKIMKFVIDEIDIRTQN
QSLKTLHVAGFTKGKAMKAIKPKTIHSCWKNLCSDVEHDFTGFMTESIKKVMKEIVDMAR
KVGGDGFQDMIPGEIQKLIDTTLEKLTEHNSMEPEPDDEQEDIEELTQQEDDKDEDTYDD
PFPLNEE

>gi568815597r:84401848_84606091|GENSCAN_predicted_CDS_1|1104_bp
atggtgtccttctcagactcagctggagcaaagcctatcaagcgagggtggcagcatcgt
caacagggagcatcgggcaaccgggctctcatctggcttctgctctgtgatctcggacag
aacagccctgatgggaagatggttggactggcctgcctccgttcctactgggccgaggaa
tggactgaggttggctgcaagtctgactttttggatatagggaaacaactggcttgcagc
atgtaccagtctctccttggtcaccagacactgctccatctcacagaggttctacaacaa
ggagttaccatcaccaaaatataccaacacccctaccacggtgtgacccatggcagtggc
aaagagtttggagaagatacaatacatgtgagtgttattaaggatctggaactgactgaa
tttgatggtttgatagaagggtcagaaaaagaagagatggggagtgactgggtaactatg
cagaatacaagaaaaagtagatttgtaggggatgatgacgcatcagttcaacagcagaat
tatacagcatgttgtttgatgatggtctttcataccgtcaagaaaagaatccgactttgc
aaaatggaggaatttttgtccctgggccgactgaagtgtgatgaattaactgagaattta
catcacacacccaagattatgaagtttgtaattgatgaaattgatattcgaacccagaac
caatcactcaagacattgcatgtggcaggttttactaaaggaaaagccatgaaagccatc
aagcccaaaacaatacattcctgctggaaaaatctgtgttcagatgttgagcatgacttc
acaggatttatgacagagtcaatcaagaaagtcatgaaagagattgtggatatggcaaga
aaggttgggggtgatggatttcaagatatgattcctggagaaattcaaaagctaatagac
accacactagagaaattaacagaacataactcaatggaaccagagccagatgatgagcaa
gaagacatagaagagctgactcaacaggaagatgacaaggatgaagacacttatgatgat
ccatttccacttaatgaagagtga

>gi568815597r:84401848_84606091|GENSCAN_predicted_peptide_2|111_aa
MRKNQYKKAENSKNQNTSSPKDHNSSSAREQTWTESEFDEFTEVGFRRWVITNSSELKEH
VLTQCKEVKTLEKRLEELLTRITSLEKNINDLMELKNTARELSEAYTSINS

>gi568815597r:84401848_84606091|GENSCAN_predicted_CDS_2|336_bp
atgaggaaaaaccagtacaaaaaggctgaaaattccaaaaaccagaacacctcttctcca
aaggatcacaactcctcatcagcaagggaacaaacctggacagagagtgagtttgacgaa
ttcacagaagtaggcttcagaaggtgggtaataacaaactcctccgagctaaaggagcat
gttctaacccaatgcaaggaagttaagacccttgaaaaaaggttagaggaattgctaact
agaataaccagtttagagaagaacataaatgacctgatggagctgaaaaacacagcacga
gaacttagtgaagcatacacaagtatcaacagctga

>gi568815597r:84401848_84606091|GENSCAN_predicted_peptide_3|192_aa
MNKNTKWSYRVQNISYLHHEDSGKRLVAKGEEKESEEGLQVLRAKQIIAIKAPKLKTIYI
KEPPSFKENQWATERQQNWRSSSKHQSPILSSSLLRYLHIMCCTRKTSIGEQKEVAPVEM
LLGLEQDAWIFQKTLKKKAKLEVNCWYLPKGAVHQVMGPQHQEAREHIAKEGVRRGGLSR
IRELCRGPCMAS

>gi568815597r:84401848_84606091|GENSCAN_predicted_CDS_3|579_bp
atgaacaagaatacaaagtggtcctatagggtccagaatataagttacctccatcatgag
gatagtggtaagaggttggtggctaagggagaagagaaggagagtgaagaaggtctacag
gttctgagagcaaagcaaataattgccatcaaagctccaaagctgaagacaatatacatc
aaggaacccccatcatttaaagagaaccagtgggctactgagaggcaacagaactggcgt
tcctcctccaagcatcagtctcccatcctttcctcctccctactgcgttatctacatatt
atgtgttgtacgagaaaaacaagtattggagaacaaaaagaagtggcaccagttgagatg
ctacttggattggagcaagatgcttggattttccagaagacactgaagaagaaagccaag
cttgaagttaattgctggtacctgcccaagggggctgtgcaccaagtgatgggaccccaa
caccaagaggctagggagcacattgctaaggaaggtgtcagaagaggtggcctgtcccgc
ataagggaactgtgcagaggcccttgtatggcttcctga

>gi568815597r:84401848_84606091|GENSCAN_predicted_peptide_4|572_aa
MAKAGDKSSSSGKKSLKRKAAAEELQEAAGAGDGATENGVQPPKAAAFPPGFSISEIKNK
QRRHLMFTRWKQQQRKVRERRGLPGACALFLTLRAVAGRTSVVVCWSQKCSLWLRGKGGV
AAHVFWSPRPSLETLGSAFCLSVKEKLAAKKKLKKEREALGDKAPPKPVPKTIDNQRVYD
ETTVDPNDEEVAYDEATDEFASYFNKQTSPKILITTSDRPHGRTVRLCEQLSTVIPNSHV
YYRRGLALKKIIPQCIARDFTDLIVINEDRKTPNGLILSHLPNGPTAHFKMSSVRLRKEI
KRRGKDPTEHIPEIILNNFTTRLGHSIGRMFASLFPHNPQFIGRQVATFHNQRDYIFFRF
HRYIFRSEKKVGIQELGPRFTLKLRSLQKGTFDSKYGEYEWVHKPELLNHFLHSGDAGGA
RHGARDGRADSWVEGPIRERVSPQLTLRALRERLGEFLGEDAIAEKFLFLKCIGNNLAVA
LQPELYLLPVMDHLGNVYSPSTVILDERQTNNGVNEADGTIHRPISVTLFKEELGRDPSL
LENTLKELPNKNQEEGDFKLEWEKERGYYSTF

>gi568815597r:84401848_84606091|GENSCAN_predicted_CDS_4|1719_bp
atggcgaaagccggggataagagcagcagcagcgggaagaaaagtctaaaacggaaagcc
gctgccgaagaacttcaggaggctgcaggcgctggggatggggcgacggaaaacggggtc
caacccccgaaagcggctgcctttccgccaggctttagcatttcggagattaaaaacaaa
cagcggcgacacttaatgttcacgcggtggaaacagcagcagcggaaggtacgcgagagg
cgggggctgccgggcgcttgcgcgttgttcctgacgcttagggcggtcgcggggcgcaca
tctgtggttgtctgctggtctcaaaagtgttctctgtggctccgtgggaagggtggcgtc
gcggcccacgtgttctggtcccctcgccctagtttggagactctaggttcagccttttgc
ctgagcgtcaaggaaaagttggcagctaagaaaaaacttaaaaaagaaagagaggctctt
ggcgataaggctccaccaaagcctgtacccaagaccattgacaaccagcgagtgtatgat
gaaaccacagtagaccctaatgatgaagaggtcgcttatgatgaagctacagatgaattt
gcttcttacttcaacaaacagacttctcccaagattctcatcacaacatcagatagacct
catgggagaacagtacgactctgtgaacagctctccacagttataccaaactcacatgtt
tattacagaagaggactggctctgaaaaaaattattccacagtgcatcgcaagagatttc
acagacctgattgttattaatgaagatcgtaaaaccccaaatggacttattttgagtcac
ttgccaaatggcccaactgctcattttaaaatgagcagtgttcgtcttcgtaaagaaatt
aagagaagaggcaaggaccccacagaacacatacctgaaataattctgaataattttaca
acacggctgggtcattcaattggacgtatgtttgcatctctctttcctcataatcctcaa
tttatcggaaggcaggttgccacattccacaatcaacgggattacatattcttcagattt
cacagatacatattcaggagtgaaaagaaagtgggaattcaggaacttggaccacgtttt
accttaaaattaaggtctcttcagaaaggaacctttgattctaaatatggagagtatgaa
tgggtccataagccggagctgttgaaccactttcttcatagcggcgacgctggaggagcc
agacatggtgcacgcgacggccgggccgattcgtgggtcgaggggccgattagggagaga
gtatctcctcaacttactttacgagccctgagggagcgtcttggtgagttcctgggtgaa
gatgctattgcagaaaaatttttatttctgaaatgcattggaaataatttagctgtggct
cttcaaccagaattatatttgcttcctgtaatggaccatttaggaaatgtttattcacca
tcaacagttattttagatgagcggcagactaataatggtgttaatgaggctgatggaaca
atccacagaccaattagtgtaactttgttcaaggaggaacttggaagagatcccagtttg
ttagaaaacactttgaaagagcttcctaacaagaatcaggaagaaggtgattttaaactg
gaatgggaaaaagaaagaggctattatagtacattttag

>gi568815597r:84401848_84606091|GENSCAN_predicted_peptide_5|258_aa
MHFWFALSNTYGQVKKECDSVADLTHFHVCLQTAEKEYITLPDHPSLPCQPVLSSGITDI
SLLQTEREKIIKQMKQVKEERRYLERNREELVKTVEKLFEQSKLKRYHAYNGWKKKYLET
KKVTASMEEVLTKLREDLELYYKKLLMQLEAREIKMRPKNLANITDSKNYLIIQITEVQH
AIDQLKRKLDTDKMKLIVEVKLLEVCLARRSTEDFVYDESAKSKEIAIATPTFSNHHPDQ
SAAINDKARHSSSKQVIT

>gi568815597r:84401848_84606091|GENSCAN_predicted_CDS_5|777_bp
atgcatttctggtttgcattatcaaatacctacgggcaagtgaaaaaagaatgtgacagt
gtagccgatcttactcattttcacgtttgcttacagacagctgaaaaagagtacatcacc
ctaccagatcacccttcacttccttgtcaacctgttctttcttcaggaataactgatata
tctttattacaaactgaaagagagaagattatcaaacaaatgaaacaagtaaaggaagaa
agaaggtatctggaaagaaatagagaagaactagtaaaaacggttgaaaagctatttgaa
caaagcaaattaaaacgatatcatgcctacaatggttggaagaaaaaatacttggaaaca
aagaaagtcacagcatcaatggaggaggttttaacaaaacttcgagaagatttggaactc
tactataaaaaactgctcatgcaacttgaagccagggagatcaagatgagaccaaagaat
ctggcaaacatcacagactccaagaattacctaataatccagatcactgaggtacagcat
gcaattgaccagcttaagagaaaactagatactgacaaaatgaaactcatagtagaagtt
aagttgctagaagtgtgcctggctaggaggtctacagaagattttgtttatgatgaatca
gccaagtcaaaagaaattgccatagccaccccaaccttcagcaaccaccaccctgatcag
tcagcagccatcaatgacaaggcaagacactcttccagcaagcaggttataacttga

>gi568815597r:84401848_84606091|GENSCAN_predicted_peptide_6|649_aa
XGRSEVWAVGSFGDGGAGGADGAAGGGPGQRGLEGLGHLEAASNGSSKTCSSDLGELLST
DLSDMIAKRAELVLQCLQRVNTGGDSPPSLQGELSLYSIPKGSPERSCKVELLAVLEFAH
QICHPRRPKVQQDDCEQDQGPQPLQKKVEDYVHERHSRLSSAFCHVRMWHKGAIWEQKLD
PHQTPDLPEFKSIRGHGLFDKVQLFILAREGPAARKYRLVHIRPDHREMVKVRQRNSDFT
QEFLLVLKQENEKWPQGIRKDPLVLMNGVIHKPEDLVETSVLTHHIPTPQGVHDQPRQNE
MQTIGRTINGGRNPLRPARPAAMSRPQLRRWRLVSSPPSGVPGLALLALLALLALRLAAG
TDCPCPEPELCRPIRHHPDFEVFVFDVGQKTWKSYDWSQITTVATFGKYDSELMCYAHSK
GARVVLKGDVSLKDIIDPAFRASWIAQKLNLAKTQYMDGINIDIEQEVNCLSPEYDALTA
LVKETTDSFHREIEGSQVTFDVAWSPKNIDRRCYNYTGIADACDFLFVMSYDEQSQIWSE
CIAAANAPYNQTLTGYNDYIKMSINPKKLVMGVPWYGYDYTCLNLSEDHVCTIAKVPFRG
APCSDAAGRQVPYKTIMKQINSSISGNLWDKDQRAPYYNYKVRLFRALV

>gi568815597r:84401848_84606091|GENSCAN_predicted_CDS_6|1950_bp
nngggtaggagtgaagtctgggcagtggggagctttggagatggtggagctggaggagct
gatggtgcagctggagggggccctggacaaaggggactggaaggactggggcacttagaa
gctgcctctaatggttcctccaaaacttgctcttctgacttaggggaactactctccaca
gacctgtctgatatgattgctaagagggctgagttggttttgcaatgcttgcaaagagtt
aacactggaggagactcgcccccaagtttgcagggagagctaagtctatatagcattcct
aaagggagcccagagaggtcctgtaaggtggaactgttggcagttttggagtttgcccac
cagatatgccatccaagaagaccaaaagtacagcaggatgattgtgaacaagaccaggga
cctcagcccttgcaaaaaaaggttgaagactatgtacatgaacgacattctaggctatcc
tcagccttctgccatgtgaggatgtggcacaaaggtgccatttgggagcagaaactggac
cctcaccagacaccagacctgccagagtttaagagcattagaggccacggtttatttgat
aaagtccagttgttcatccttgcaagagaagggcctgcagcgcggaaatacagacttgtc
cacattaggccagatcacagagaaatggtaaaagtccggcagaggaattcggacttcact
caggagttcctgctggttctgaagcaggaaaatgagaagtggcctcagggaattagaaag
gatccactggtgttgatgaatggagtaatccacaagccggaggatctggtggaaacatcg
gtgctcacacatcacattccgactccacaaggagtacacgaccagccacgacaaaacgag
atgcagactattgggaggactataaacggcggtaggaacccactccggcccgctagacct
gctgctatgtcccggccgcagcttcgacgctggcgcctcgtctctagcccgccgagcggc
gtcccgggtctagcgctgctggcgctgctggcgctgctggcgctgcggctcgcggccggg
accgactgcccatgcccggagcctgagctctgccgcccgattcgccaccatccagatttc
gaggtctttgtgtttgatgttggacagaaaacttggaaatcttatgattggtcacagatt
acaactgtggcaacatttggaaaatatgactcagaacttatgtgctacgctcattcaaaa
ggagccagagtagtacttaaaggagatgtatccttaaaggatatcattgatcctgctttc
agagcatcctggatagctcaaaaacttaatttggccaaaacacaatatatggatggaatt
aatatagatatagagcaagaagttaattgtttatcacctgaatatgatgcattaactgct
ttagtcaaagaaactacagactctttccatcgtgaaattgagggatcacaggtaaccttt
gatgtagcttggtctccaaagaacatagacagaagatgctataattatactggaatcgca
gatgcttgtgacttcctctttgtgatgtcttatgatgaacaaagtcagatctggtcagaa
tgtattgcagcagccaatgctccctataatcagacattaactggatataatgactacatc
aagatgagcattaatcctaagaaacttgtaatgggtgttccttggtatggttatgattat
acctgcctgaatctgtctgaggatcatgtttgtaccattgcaaaagtccctttccggggg
gctccttgtagtgacgctgcaggacgtcaggtgccctacaaaacgatcatgaagcaaata
aatagttctatttctggaaacctatgggataaagatcagcgggctccttattataactat
aaagtaagacttttcagagctttagtgtag