GENSCAN 1.0	Date run:  7-Nov-116	Time: 17:03:24

Sequence gi568815597r:37945430_38146743 : 201314 bp : 49.87% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.21 Intr -    421    327   95  1  2   26   77   149 0.281   6.36
 1.20 Intr -   3519   3457   63  0  0  123   30    34 0.267   0.01
 1.19 Intr -   4266   4171   96  0  0  117   83    45 0.692   7.11
 1.18 Intr -   6418   6351   68  2  2   98  115    63 0.964   8.62
 1.17 Intr -   9398   9308   91  2  1  100   36    25 0.330  -1.93
 1.16 Intr -  14746  14691   56  2  2   88   90    32 0.812   2.10
 1.15 Intr -  22705  22615   91  1  1  119   95    19 0.983   5.27
 1.14 Intr -  23057  23034   24  2  0   83  111    19 0.783   1.92
 1.13 Intr -  24035  23925  111  2  0   91   59   166 0.835  14.58
 1.12 Intr -  24306  24142  165  0  0   49  106   218 0.958  19.86
 1.11 Intr -  31524  31455   70  2  1   74   98    42 0.987   2.98
 1.10 Intr -  33398  33291  108  1  0  102  101    67 0.988   8.80
 1.09 Intr -  33626  33559   68  2  2   90   90   -33 0.801  -5.20
 1.08 Intr -  35295  35157  139  2  1   93  105    44 0.823   7.07
 1.07 Intr -  36382  36300   83  1  2  102   80    67 0.992   5.74
 1.06 Intr -  38831  38740   92  0  2   69   94    88 0.999   7.21
 1.05 Intr -  39350  39278   73  2  1   87  106    82 0.999   8.88
 1.04 Intr -  42249  42144  106  2  1   47   87   112 0.997   7.22
 1.03 Intr -  42407  42355   53  2  2   80  106    34 0.972   2.11
 1.02 Intr -  44166  44119   48  0  0   91   76    26 0.589   0.58
 1.01 Init -  44536  44441   96  1  0   95  113   194 0.999  22.91
 1.00 Prom -  45753  45714   40                              -5.96

 2.06 PlyA -  46486  46481    6                               1.05
 2.05 Term -  50036  49945   92  0  2  106   54    57 0.953   1.98
 2.04 Intr -  52441  52255  187  1  1   64   47   194 0.382  12.16
 2.03 Intr -  52703  52534  170  0  2  113   81   152 0.999  16.67
 2.02 Intr -  53719  53545  175  1  1  116   84   204 0.982  22.31
 2.01 Init -  53983  53828  156  1  0  108   86   268 0.895  28.51
 2.00 Prom -  65262  65223   40                              -5.36

 3.00 Prom +  66541  66580   40                              -7.16
 3.01 Init +  67374  67436   63  2  0  103   91    70 0.801   9.96
 3.02 Intr +  70930  70991   62  0  2  101   70    92 0.997   6.23
 3.03 Intr +  72239  72341  103  2  1   69   94   118 0.997  10.68
 3.04 Intr +  73035  73148  114  2  0   30   86    68 0.726   1.44
 3.05 Intr +  73630  73723   94  0  1   74   86    63 0.970   4.24
 3.06 Intr +  73824  73954  131  1  2   30   86    66 0.917   1.01
 3.07 Intr +  77270  77380  111  1  0   82   77   137 0.999  12.58
 3.08 Term +  78116  78199   84  1  0  125   45    68 0.996   3.85
 3.09 PlyA +  79371  79376    6                               1.05

 4.04 PlyA -  79451  79446    6                               1.05
 4.03 Term -  79999  79906   94  0  1  123   47    57 0.514   2.40
 4.02 Intr -  81836  81685  152  2  2   70   41    52 0.158  -2.34
 4.01 Init -  85099  85043   57  1  0   59  102    59 0.279   5.71
 4.00 Prom -  94505  94466   40                              -3.06

 5.02 PlyA -  96442  96437    6                              -0.45
 5.01 Sngl - 101314  99959 1356  1  0  103   46  2115 0.937 202.95
 5.00 Prom - 104453 104414   40                              -6.26

 6.03 PlyA - 107747 107742    6                               1.05
 6.02 Term - 114721 114458  264  1  0   44   36   104 0.200  -3.69
 6.01 Init - 117720 117448  273  0  0   89   81   147 0.668   9.31
 6.00 Prom - 136658 136619   40                              -2.66

 7.04 PlyA - 136716 136711    6                              -0.45
 7.03 Term - 138084 138014   71  1  2   95   43    53 0.427  -0.40
 7.02 Intr - 138553 138489   65  0  2   83  106    15 0.418   1.16
 7.01 Init - 143383 143235  149  1  2   66  108    87 0.549   6.21
 7.00 Prom - 143952 143913   40                              -5.36

 8.00 Prom + 149676 149715   40                              -7.36
 8.01 Init + 150413 150486   74  1  2    9   87   127 0.636   3.26
 8.02 Term + 151999 152215  217  1  1  120   37   153 0.938  10.02
 8.03 PlyA + 157679 157684    6                               1.05

 9.07 PlyA - 157906 157901    6                               1.05
 9.06 Term - 167821 167678  144  1  0   86   45    76 0.152   1.01
 9.05 Intr - 170164 170051  114  1  0  111   81    11 0.179   3.34
 9.04 Intr - 178029 177963   67  2  1   81   28    95 0.025   1.71
 9.03 Intr - 182502 182375  128  0  2   61   56   105 0.262   4.08
 9.02 Intr - 190984 190616  369  1  0   96   22   116 0.140   1.10
 9.01 Intr - 193569 193494   76  2  1  115   64    56 0.371   5.42

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597r:37945430_38146743|GENSCAN_predicted_peptide_1|599_aa
METILEQQRRYHEEKERLMDVMAKEMLTKKSTLRDQINSDHRTRAMQDRYMEVSGNLRDL
YDDKDGLRKEELNAISGPNEFAEFYNRLKQIKEFHRKHPNEICVPMSVEFEELLKARENP
SEEAQNLVEFTDEEGYGRYLDLHDCYLKYINLKASEKLDYITYLSIFDQLFDIPKERKNA
EYKRYLEMLLEYLQDYTDRVKPLQDQNELFGKIQAEFEKKWENGTFPGWPELASLGLDRL
KSALLALGLKCGGTLEERAQRLFSTKGKSLESLDTSLFAKNPKSKGTKRDTERNKDIAFL
EAQIYEYVEILGEQRHLTHENVQRKQARTGEEREEEEEEQISESESEDEENEIIYNPKNL
PLGWDGKPIPYWLYKLHGLNINYNCEICGNYTYRGPKAFQRHFAVFGVAGALEWRHAHGM
RCLGIPNTAHFANVTQIEDAVSLWAKLKLQKASERWQPDTEVLLSASAQSSQGGNEPVTL
STLIQKSPPITVLLLALLVAQNLASSQLTPAPVQKKICATFSCQGGDCFKGPKAVAMCPE
GLDFCELGPAESGSSSQEDPVGSTSLQAVQGVLCEGDSRQSRLLGLVRYRLEHGGQEHA

>gi568815597r:37945430_38146743|GENSCAN_predicted_CDS_1|1797_bp
atggagacaatactggagcagcagcggcgctatcatgaggagaaggaacggctcatggac
gtcatggctaaagagatgctcaccaagaagtccacgctccgggaccagatcaattctgat
caccgcactcgggccatgcaagataggtatatggaggtcagtgggaacctgagggatttg
tatgatgataaggatggattacgaaaggaggagctcaatgccatttcaggacccaatgag
tttgctgaattctataatagactcaagcaaataaaggaattccaccggaagcacccaaat
gagatctgtgtgccaatgtcagtggaatttgaggaactcctgaaggctcgagagaatcca
agtgaagaggcacaaaacttggtggagttcacagatgaagagggatatggtcgttatctc
gatctccatgactgttacctcaagtacattaacctgaaggcatctgagaagctggattat
atcacatacctgtccatctttgaccaattatttgacattcctaaagaaaggaagaatgca
gagtataagagatacctagagatgctgcttgagtaccttcaggattacacagatagagtg
aagcctctccaagatcagaatgaactttttgggaagattcaggctgagtttgagaagaaa
tgggagaatgggacctttcctggatggccggagttggcttctctgggtttggacagattg
aaatctgctctcttagctttaggcttgaaatgtggcgggaccctagaagagcgagcccag
agactattcagtaccaaaggaaagtccctggagtcacttgatacctctttgtttgccaaa
aatcccaagtcaaagggcaccaagcgagacactgaaaggaacaaagacattgcttttcta
gaagcccagatctatgaatatgtagagattctcggggaacagcgacatctcactcatgaa
aatgtacagcgcaagcaagccaggacaggagaagagcgagaagaagaggaagaagagcag
atcagtgagagtgagagtgaagatgaagagaacgagatcatttacaaccccaaaaacctg
ccacttggctgggatggcaaacctattccctactggctgtataagcttcatggcctaaat
atcaactacaactgtgagatttgtggaaactacacctaccgagggcccaaagccttccag
cgacactttgctgtgtttggagttgctggggctttggaatggcgtcatgctcatggcatg
aggtgtttgggcatcccaaacactgctcactttgctaatgtgacacagattgaagatgct
gtctccttgtgggccaaactgaaattgcagaaggcttcagaacgatggcagcctgacact
gaggtcctactgtcagcctcagctcagagttctcagggtgggaatgaacctgtgaccctc
tccaccctcatccagaagagtcctcccattacagtcctcctgctggccttactggtagcc
cagaacctggcaagcagtcagttgacccctgctcctgtccagaagaaaatctgtgctact
ttctcctgccaaggtggtgactgtttcaaagggccgaaagctgtggccatgtgccctgag
ggcttggacttctgtgagctgggcccagcagaatctgggagcagcagtcaagaagaccct
gtaggatctacaagccttcaggcggtgcaaggtgtgctgtgtgagggggacagccggcag
agccgcctcctgggactcgtgcgctaccgcctggagcacggcggccaggaacacgcn

>gi568815597r:37945430_38146743|GENSCAN_predicted_peptide_2|259_aa
MSESFDCAKCNESLYGRKYIQTDSGPYCVPCYDNTFANTCAECQQLIGHDSRELFYEDRH
FHEGCFRCCRCQRSLADEPFTCQDSELLCNDCYCSAFSSQCSACGETVMPGSRKLEYGGQ
TWHEHCFLCSGCEQPLGSRSFVPDKGAHYCVPCYENKFAPRCARCSKTLTQGGVTYRDQP
WHRECLVCTGCQTPLAGQQFTSRDEDPYCVACFGELFAPKCSSCKRPIVAPGTYYVFSKY
LLRKSSPSIENNWRKGLEA

>gi568815597r:37945430_38146743|GENSCAN_predicted_CDS_2|780_bp
atgagcgagtcatttgactgtgcaaaatgcaacgagtccctgtatggacgcaagtacatc
cagacagacagcggcccctactgtgtgccctgctatgacaatacctttgccaacacctgt
gctgagtgccagcagcttatcgggcatgactcgagggagctgttctatgaagaccgccat
ttccacgagggctgcttccgctgctgccgctgccagcgctcactagccgatgaacccttc
acctgccaggacagtgagctgctctgcaatgactgctactgcagtgcgttttcctcgcag
tgctccgcttgtggggagactgtcatgcctgggtcccggaagctggaatatggaggccag
acatggcatgagcactgcttcctgtgcagtggctgtgaacagccactgggctcccgttct
tttgtgcccgacaagggtgctcactactgcgtgccctgctatgagaacaagtttgctcct
cgctgcgcccgctgcagcaagacgctgacacagggtggagtgacataccgtgatcagccg
tggcatcgagaatgtctggtctgtaccggatgccagacgcccctggcagggcagcagttc
acctcccgggatgaagatccctactgtgtggcctgttttggagaactctttgcacctaag
tgcagcagctgcaagcgccccatcgtagctcccggcacttactatgtgttcagtaaatac
ttgttgaggaagagcagtccaagcatagaaaacaactggcgcaaaggcctggaggcctga

>gi568815597r:37945430_38146743|GENSCAN_predicted_peptide_3|253_aa
MAAAFRKAAKSRQREHRERSQPGFRKHLGLLEKKKDYKLRADDYRKKQEYLKALRKKALE
KNPDEFYYKMTRVKLQDGVHIIKETKEEVTPEQLKLMRTQDVKYIEMKRVAEAKKIERLK
SELHLLDFQGKQQNKHVFFFDTKKEVEQFDVATHLQTAPELVDRVFNRPRIETLQKEKVK
GVTNQTGLKRIAKERQKQYNCLTQRIEREKKLFVIAQKIQTRKDLMDKTQKVKVKKETVN
SPAIYKFQSRRKR

>gi568815597r:37945430_38146743|GENSCAN_predicted_CDS_3|762_bp
atggcggcggcttttcggaaggcggctaagtcccggcagcgggaacacagagagcgaagc
cagcctggctttcgaaaacatctgggcctgctggagaaaaagaaagattacaaacttcgt
gcagatgactaccgtaaaaaacaagaatacctcaaagctcttcggaagaaggctcttgaa
aaaaatccagatgaattctactacaaaatgactcgggttaaactccaggatggagtacat
attattaaggagactaaggaagaagtaaccccagaacaactaaagctgatgagaactcag
gacgtcaaatatatagaaatgaagagggttgcagaagctaagaaaatcgaaagactaaaa
tcagagctccatctgctggatttccaggggaagcaacagaacaagcatgtgttctttttt
gacaccaaaaaggaagttgaacagtttgatgtcgcaactcacctgcaaacagccccggag
ctagtcgacagagtctttaataggcccaggatagagaccttgcagaaagaaaaagtgaaa
ggagttaccaatcagactggacttaagcgaatagctaaagaaaggcaaaagcagtataac
tgcctgacacagcggattgaacgagagaagaaattgttcgttattgctcagaaaattcaa
acacgcaaagatcttatggataaaactcagaaagtgaaggtgaagaaagaaacggtgaac
tccccagctatttataaatttcagagtcgtcgaaaacgttga

>gi568815597r:37945430_38146743|GENSCAN_predicted_peptide_4|100_aa
MIKPTEKIDKGAKQLQLCKVGRASLHLLAAFPAGGRAALTAQCPTVSSMGERTVSDKQML
KAARRETPPRAPDLNSTGYTLRKQASSLGLYRKLTVMGTY

>gi568815597r:37945430_38146743|GENSCAN_predicted_CDS_4|303_bp
atgattaaacccacagagaagattgataagggagctaaacagctgcaactctgcaaggta
ggcagagcgagtctgcatctgttggctgccttccctgctggaggacgtgcagctctaact
gctcagtgccccaccgtcagcagcatgggggagaggacagtgagcgacaaacagatgctt
aaagctgcacggagggagacccctcccagggcccctgatttaaattccactgggtacacc
ctgaggaaacaggcttctagtctaggcttgtacaggaagctcacagtcatgggcacttat
taa

>gi568815597r:37945430_38146743|GENSCAN_predicted_peptide_5|451_aa
MATTAQYLPRGPGGGAGGTGPLMHPDAAAAAAAAAAAERLHAGAAYREVQKLMHHEWLGA
GAGHPVGLAHPQWLPTGGGGGGDWAGGPHLEHGKAGGGGTGRADDGGGGGGFHARLVHQG
AAHAGAAWAQGSTAHHLGPAMSPSPGASGGHQPQPLGLYAQAAYPGGGGGGLAGMLAAGG
GGAGPGLHHALHEDGHEAQLEPSPPPHLGAHGHAHGHAHAGGLHAAAAHLHPGAGGGGSS
VGEHSDEDAPSSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQ
LSFKNMCKLKPLLNKWLEETDSSSGSPTNLDKIAAQGRKRKKRTSIEVGVKGALESHFLK
CPKPSAHEITGLADSLQLEKEVVRVWFCNRRQKEKRMTPAAGAGHPPMDDVYAPGELGPG
GGGASPPSAPPPPPPAALHHHHHHTLPGSVQ

>gi568815597r:37945430_38146743|GENSCAN_predicted_CDS_5|1356_bp
atggccaccaccgcgcagtacctgccgcggggccccggtggcggagccgggggcaccggg
ccgcttatgcacccggacgccgcggcggcggcggcggcggcggcggccgcggagcgattg
catgcaggggccgcgtaccgcgaagtgcagaagctgatgcaccacgagtggctgggcgcg
ggcgcgggccaccccgtgggcctagcgcacccccagtggctacccacgggaggaggcggc
ggcggcgattgggccggcggcccgcacctagaacacggcaaggcaggcggcggcggcacc
ggccgagccgacgacggcggcggcggcggaggtttccacgcgcgcctggtgcaccagggg
gcggcccacgcgggcgcggcatgggcgcagggcagcacagcgcaccacttgggcccggcc
atgtcgccctcgcccggggccagcgggggccaccagccccagccgctcgggctgtacgcg
caggcggcctacccggggggcggcggcggcggcctggccgggatgctggcggcgggcggt
ggcggcgcggggccgggcctgcaccacgcgctgcacgaggatggccacgaggcgcagctg
gagccgtcgccgccgccgcatctgggcgcccacggacacgcacacggacatgcacacgcg
ggcggcctgcacgcggcggcggcgcacctgcacccgggcgcgggcggcggcggctcatcg
gtgggcgagcactcggacgaggatgcgcccagctcggacgacctggagcagttcgccaag
cagttcaagcagcggcgcatcaagctgggctttacgcaggccgacgtggggctggcgctg
ggcacgctctacggtaacgtgttctcgcagaccaccatctgccgcttcgaggccctgcag
ctgagcttcaagaacatgtgcaagctcaagccgctgctcaacaagtggctggaggagacc
gactcgtccagcggcagccccaccaacctggacaagatcgcggcgcagggccgcaagcgc
aagaagcgcacgtccatcgaggtgggggtcaaaggcgcgctcgagagccactttctcaag
tgccccaagccctcggcgcacgagatcaccggcttggcagacagcctgcagctggagaag
gaggtggtgcgcgtctggttctgcaaccggcggcagaaggagaagcgcatgacccctgcg
gccggcgcgggccacccgcccatggacgatgtatacgcgcctggggagctagggcctggc
gggggcggcgcatcgccaccctccgcgcccccaccgcccccgccggcggcgctgcaccac
caccaccaccacacactgcccggctcagtgcagtga

>gi568815597r:37945430_38146743|GENSCAN_predicted_peptide_6|178_aa
MGRLPGNKALPLEQCKALALLTWRPHWHTPQLGLKVIGLVQQEWQQHARFPTNQGAQARQ
LLPTPQPTQSPSSWLYRDGGTSLHKELSTNLTSPTHTSCPNHARITGSRLLTTPSMAASH
YLWLPATTHGCHFQATREPPHAHTEPAATLMPAMPLQGPEAWQKNHTGTLTLIKDTHK

>gi568815597r:37945430_38146743|GENSCAN_predicted_CDS_6|537_bp
atgggcaggctgccaggcaacaaggccctgcccctggagcagtgcaaagccctggccctg
ctcacctggcgaccacattggcacactccacagctgggactgaaggtcataggcctggtg
cagcaggagtggcagcagcatgcaagattccccactaaccagggtgcccaagccaggcag
ctgctgccaaccccacagccaacacagagcccctcctcttggctctacagagatggaggg
acttcacttcacaaggagctctctacaaacctgacatccccgactcacaccagctgccca
aatcacgctagaataacaggctccaggctgctcaccacgccctctatggctgccagccac
tacctatggctgccagccactacccatggctgtcactttcaggccacccgagaaccccca
catgctcacacggagcctgcagccacattgatgccagccatgcccttgcagggcccagaa
gcctggcagaaaaatcacacaggcactttgacattaatcaaagacactcataaataa

>gi568815597r:37945430_38146743|GENSCAN_predicted_peptide_7|94_aa
MPTVPALGLPSLPQASQSVLCLKILGAFWELWHSLELLAQKRAGESVEGNTYPQAFQRSM
GWPATDLPVAVVSMHINASLHCQCSSTSHIFVGV

>gi568815597r:37945430_38146743|GENSCAN_predicted_CDS_7|285_bp
atgcccactgtacctgcacttgggttgccaagccttccccaggccagccagtcagtcctc
tgcctcaagattcttggtgctttctgggaactctggcacagcctggagctgctggcccag
aagagggctggggagagtgtggaaggcaacacatatccacaggcatttcaaaggagcatg
ggctggccagctactgatctccctgtggccgtggtctccatgcacatcaatgcttcgtta
cattgtcagtgtagcagtacaagtcacatctttgtcggggtctag

>gi568815597r:37945430_38146743|GENSCAN_predicted_peptide_8|96_aa
MLLQMGLCLWACGFLVATQLPVWPNTRRPEPDASALPPPSRSTWDGRVLVAVAVLSSPTP
GAATAGPRGLETTNGSLLMGCLPPPVCQPVLLHTGR

>gi568815597r:37945430_38146743|GENSCAN_predicted_CDS_8|291_bp
atgttgctgcagatgggactctgcctctgggcctgtggcttcctggttgccactcagctg
cccgtgtggccaaacacaaggaggccagagccggatgccagcgcccttcctcccccatcc
cgcagcacctgggatgggcgtgtgctcgtcgctgtcgccgtgctctcgtctcccactcct
ggagcagccacagcaggtcccaggggcctggagacaacaaatggctccctgctgatgggc
tgcttgccgcctcctgtctgccagccagtcctgctgcacaccggcagataa

>gi568815597r:37945430_38146743|GENSCAN_predicted_peptide_9|299_aa
XATTYAPPLGSCPEGKAVGSRAVDNQERRPEFHAGSLQSQWRRLYETQPHWLQPLRMHLR
EQPGRHPPAWPVLSAGQSVSESRKADWGSIHTDSSRKASLWFLITPSREAFLVMREKIFN
NLSLQCADLLERERERERAEKVEEGFQRRNQENTTRPPGVVIQSKQSEEGKGGVEQNGKE
EEGGCHMVEKSVGFGLDNFKGSWVMSKAFKLPGRTLILHTPTIHLIDVHTRIHVWAPQEH
PYLHTISPVPPKTAHFKHSKSAWLPYTAIQARPQVLREEYHYGAAKEPLFQDSWNHRNL

>gi568815597r:37945430_38146743|GENSCAN_predicted_CDS_9|900_bp
nnggccacaacttatgctcctcctctggggtcctgccctgaaggcaaagctgtgggcagc
agggctgtggacaatcaggagaggcgccctgaattccatgccgggtcattacagagccag
tggcggagactctatgagacccagccccactggctgcagccccttcggatgcatctgcga
gagcagcctggccgtcacccgccggcctggcccgtgctgtcagccggccagagcgtgtct
gaatcgaggaaagctgactggggctcgattcacactgactcgagccgcaaggcgagttta
tggttcttgattacacccagcagggaggccttcttagtgatgagagagaaaatattcaac
aacctgtctttgcaatgtgctgatctcttggagagagagagagagagagagagagcagag
aaagtggaggaggggtttcaaaggaggaaccaagagaacacaaccaggccaccaggtgtt
gtcatccagtcaaagcagagtgaagaaggaaaaggaggggtggagcagaatggcaaggag
gaggagggtggttgtcacatggtagagaaaagtgtgggatttggactggacaatttcaaa
ggctcttgggtgatgtcgaaggccttcaagctgccagggaggactctcattttacacaca
cctacaattcacttaatagacgtacacactcgcatacacgtctgggccccccaggaacac
ccgtatttacacacgatatccccagtccccccaaagactgctcatttcaagcattccaag
tccgcctggctgccgtacacagcaatacaagctaggccacaggttctgagggaggagtac
cactatggggcagccaaggagcccctcttccaggactcatggaaccacagaaatctatga