GENSCAN 1.0	Date run:  6-Nov-116	Time: 05:17:17

Sequence gi568815597r:32913184_33136828 : 223645 bp : 46.61% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.12 PlyA -   2365   2360    6                               1.05
 1.11 Term -   8148   7993  156  0  0   21   43   187 0.846   5.43
 1.10 Intr -  13083  12941  143  1  2   35  115    17 0.065  -0.83
 1.09 Intr -  24076  23715  362  0  2   70   50   339 0.376  23.16
 1.08 Intr -  25345  25214  132  0  0  103   91   112 0.999  12.76
 1.07 Intr -  29276  29069  208  0  1   58   97   124 0.967   8.44
 1.06 Intr -  30976  30836  141  2  0  146   98   133 0.999  20.42
 1.05 Intr -  32445  32331  115  0  1   91   99    84 0.999   9.82
 1.04 Intr -  33381  33219  163  2  1  119  116   142 0.998  20.08
 1.03 Intr -  35183  35039  145  0  1   48  110   -13 0.427  -3.76
 1.02 Intr -  36591  36386  206  2  2   68   75   156 0.738  11.14
 1.01 Init -  51502  50868  635  1  2   95   88   930 0.134  88.52
 1.00 Prom -  63674  63635   40                              -6.96

 2.00 Prom +  65346  65385   40                              -7.96
 2.01 Sngl +  66762  67289  528  2  0   78   43   670 0.779  57.56
 2.02 PlyA +  67319  67324    6                               1.05

 3.05 PlyA -  70685  70680    6                               1.05
 3.04 Term -  74213  73831  383  0  2   40   43   190 0.761   4.70
 3.03 Intr -  79140  79047   94  0  1  102   75   -11 0.484  -1.46
 3.02 Intr -  84646  84528  119  2  2   33   72    94 0.452   2.48
 3.01 Init -  85430  85328  103  2  1   66   80    76 0.793   5.00
 3.00 Prom -  88249  88210   40                              -3.56

 4.07 PlyA -  90077  90072    6                               1.05
 4.06 Term - 100219  99998  222  1  0  112   35   269 0.952  20.92
 4.05 Intr - 101411 101339   73  1  1  124   52   104 0.999   9.81
 4.04 Intr - 108278 108184   95  2  2   30   63   123 0.998   2.76
 4.03 Intr - 108520 108410  111  1  0   90   64   107 0.870   9.08
 4.02 Intr - 111384 111259  126  0  0   82   82    58 0.612   5.48
 4.01 Init - 123645 123553   93  0  0  105   99   105 0.893  13.68
 4.00 Prom - 126786 126747   40                              -3.46

 5.00 Prom + 129057 129096   40                              -7.66
 5.01 Init + 137987 138230  244  1  1   72   53   134 0.099   6.24
 5.02 Intr + 145154 145224   71  0  2   64   35    62 0.070  -2.60
 5.03 Intr + 151243 151386  144  0  0   96   91    65 0.236   8.08
 5.04 Intr + 157465 157833  369  0  0 -118   78   351 0.004   8.80
 5.05 Intr + 168995 169171  177  1  0  116   89   190 0.924  22.02
 5.06 Intr + 170771 170944  174  1  0   84  105   100 0.912  11.44
 5.07 Intr + 178867 179039  173  0  2   66   82   203 0.426  16.24
 5.08 Intr + 181365 181530  166  0  1   82   76   169 0.728  15.06
 5.09 Intr + 183524 183686  163  1  1   92   73   210 0.995  19.45
 5.10 Intr + 184884 184996  113  1  2   95  105   200 0.986  22.50
 5.11 Term + 186352 186474  123  0  0   79   39    46 0.401  -2.82
 5.12 PlyA + 188379 188384    6                               1.05

 6.00 Prom + 192876 192915   40                              -6.16
 6.01 Init + 193468 193647  180  0  0   87   77   108 0.848   8.78
 6.02 Intr + 204719 204933  215  1  2   75   99   223 0.997  19.61
 6.03 Intr + 206861 206995  135  2  0  100   84   165 0.996  16.98
 6.04 Intr + 207234 207255   22  0  1   99   64     7 0.878  -3.05
 6.05 Term + 207760 207888  129  0  0  118   53   135 0.987  11.18
 6.06 PlyA + 208396 208401    6                               1.05

 7.03 PlyA - 210191 210186    6                               1.05
 7.02 Term - 216640 216571   70  0  1   95   36    84 0.623   1.31
 7.01 Init - 220420 220275  146  1  2   78  115    73 0.519   6.87

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl -  51502  50864  639  1  0   95   53   942 0.866  87.59


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597r:32913184_33136828|GENSCAN_predicted_peptide_1|801_aa
MGSEKDSESPRSTSLHAAAPDPKCRSGGRRRRLTLHSVFSASARGRRARAKPQAEPPPPA
AQPPPAPAPAAAQGPPPEALPAEPAAEAEAEAAAAAAEPGFDDEEAAEGGGPGAEEVECP
LCLVRLPPERAPRLLSCPHRSCRDCLRHYLRLEISESRVPISCPECSERLNPHDIRLLLA
DPPLMHKYEEFMLRRYLASDPDCRWCPAPDCGYAVIAYGCASCPKLTCEREGCQTEFCYH
CKQIWHPNQTCDMARQQRAQTLRVRTKHTSGLSYGQESGPADDIKPCPRCSAYIIKMNDG
SCNHMTCAVCGCEFCWLCMKEISDLHYLSPSGCTFWGKKPWSRKKKILWQLGTLIGAPVG
ISLIAGIAIPAMVIGIPVYVGRKIHSRYEGRKTSKHKRNLAITGGVTLSVIASPVIAAVS
VGIGVPIMLAYVYGVVPISLCRGGGCGVSTANGKGVKIEFDEDDGPITVADAWRALKNPS
IGESSIEGLTSVLSTSGSPTDGLSVMQGPYSETASFAALSGGTLSGGILSSGKGKYSRLE
VQADVQKEIFPKDTASLGAISDNASTRAMAGSIISSYNPQDRECNNMEIQVDIEAKPSHY
QLVSGSSTEDSLHVHAQMAENEEEGSGGGGSEEDPPCRHQSCEQKDCLASKPWDISLAQP
ESIRSDLESSDAQSDDVPDITSDECGSPRSHTAACPSTPRAQDGGLTGEAPPEDVPGPHK
TLSSGGERIDHRCVPTKNSTPKSSVSSPGKKARIESTFEIDQSNAFIRQRRKRRHKEEDI
KTTRPSAYSSLSRLLRPVDLS

>gi568815597r:32913184_33136828|GENSCAN_predicted_CDS_1|2406_bp
atgggctccgagaaggactccgagtcgccgcgctccacatcgctacatgcggccgcaccc
gaccctaagtgccgcagcggcggccggcgccggcgcctcaccttgcacagcgtcttctct
gcctcggcccgcggccgccgcgcccgggccaagccgcaggccgagccgccgcccccggct
gcgcagccgccgcccgccccggcccctgccgcggcccagggcccgccgcccgaggcgctg
cccgccgagccggccgccgaggccgaggcggaggccgcggcggcggcggcggagcctggg
ttcgacgatgaggaggcggcggagggcggtggcccgggcgcggaggaggtggagtgtccg
ctgtgcctggtgcggctgccgcctgagcgggccccgcgcctcctcagctgtccgcaccgc
tcgtgccgggactgcctccgccactacctgcgcctggagataagcgagagcagggtgccc
atcagctgccccgagtgcagcgagcgactcaacccgcacgacatccgcttgctgctcgcc
gacccgccgcttatgcacaagtacgaggagttcatgctgcgccgctacctagcctcggac
cccgactgccgctggtgcccggccccggactgcggttatgctgttattgcctatggctgt
gccagctgcccgaagctaacttgtgagagggaaggttgccagactgagttctgctaccac
tgcaagcagatatggcatccaaatcagacatgcgatatggcccgtcaacagagggcccag
actttacgagttcggaccaaacacacttcaggtctcagttatgggcaagaatctggacca
gcagatgacatcaagccatgcccacgatgcagtgcatacattatcaagatgaatgatgga
agctgtaatcacatgacctgtgcagtgtgtggctgtgaattctgttggctttgtatgaaa
gagatctcagacttgcattacctcagcccctctggctgtacattctggggcaagaagcca
tggagccgtaagaagaaaattctttggcagctgggcacgttgattggtgctccagtgggg
atttctctcattgctggcattgccattcctgccatggtcattggcattcctgtttatgtt
ggaaggaagattcacagcaggtatgagggaaggaaaacctccaaacacaagaggaatttg
gctatcactggaggagtgactttgtcggtcattgcatccccagttattgctgcagttagt
gttggtattggtgtccccattatgctggcatatgtttatggggttgtgcccatttctctt
tgtcgtggaggcggctgtggagttagcacagccaacggaaaaggagtgaaaattgaattt
gatgaagatgatggtccaatcacagtggcagatgcctggagagccctcaagaatcccagc
attggggaaagcagcattgaaggcctgactagtgtattgagcactagtggaagccctaca
gatggacttagtgttatgcaaggtccttacagcgaaacggccagctttgcagccctctca
gggggcacgctgagtggcggcattctctccagtggcaagggaaaatatagcaggttagaa
gttcaagccgatgtccaaaaggaaattttccccaaagacacagccagtcttggtgcaatt
agtgacaacgcaagcactcgtgctatggccggttccataatcagttcctacaacccacag
gacagagaatgcaacaatatggaaatccaagtggacattgaagccaaaccaagccactat
cagctggtgagtggaagcagcacggaggactcgctccatgttcatgctcagatggcagag
aatgaagaagaaggtagtggtggcggaggcagtgaagaggatcccccctgcagacaccaa
agctgtgaacagaaagactgcctggccagcaaaccttgggacatcagcctggcccagcct
gaaagcatccgcagtgacctagagagttctgatgcacagtcagacgatgtgccagacatc
acctcagatgagtgtggctccccccgctcccatactgcagcctgcccctcgacccccaga
gcccaagacggcggacttacaggggaggcgccacctgaagacgttccagggccccataag
accctatcttccggaggggaacggatcgaccaccggtgtgtgcccacaaaaaattcaact
cctaagtcctcagtttctagtcccgggaagaaagccagaattgaaagcacctttgagatc
gaccagtccaacgccttcattcgacaaagaaggaaacgaaggcacaaggaggaagacata
aaaaccacgaggccgagtgcctacagctccctcagtcgcctcctgaggccagtggacctg
agctga

>gi568815597r:32913184_33136828|GENSCAN_predicted_peptide_2|175_aa
MKALGTQQEYKVVCHCLPTPKCHTLPLYHMQIFAPNHVVAKFHFWYFLSQLKKMKKSSGE
TVNCGQVFEKYPLWVKNFGIWLRYDSRSSTHNMYREYRDLTTMGAVTQCYQDMGTQYRAR
ANFIQIMKVEEIAASKCWWPVVKQFHDSKIKFLLPHLVLCHQQKPRFTRRPNTFF

>gi568815597r:32913184_33136828|GENSCAN_predicted_CDS_2|528_bp
atgaaggccttgggcacacaacaagagtacaaggtggtgtgtcactgcctgcccaccccc
aaatgccacacactgcccctctaccacatgcaaatctttgcgcctaatcatgtagtcgcc
aagttccacttctggtacttcctatctcaattaaagaagatgaagaagtcttcaggggag
actgtcaactgtgggcaggtgtttgagaagtacccactgtgggtgaagaactttggcatc
tggctgcgctatgactcccggagcagcacccacaacatgtacagggaataccgggaccta
accaccatgggcgctgtcacccagtgctaccaagacatgggcacccagtaccgcgcccgg
gccaacttcatccagatcatgaaggtggaggagattgcggccagcaagtgctggtggcca
gttgtcaagcaattccacgactccaagatcaagttcctgctgccccacttggtgctgtgc
catcagcagaagccacgcttcaccaggagacccaacaccttcttctag

>gi568815597r:32913184_33136828|GENSCAN_predicted_peptide_3|232_aa
MPKELQGSMERATDCLQCPGWLPYRKDVELLHLPDREGIPELQFEHEVLENQLPEAAQEE
CYQVRDDLFQVIWPGLLSGLKRGIEYQVLVFVLLSENFLKIAWERDGRGYLLGALNTQTN
VATVVPNGNTHLEPGMLVSAGLLLHGRGLQNLILERCPQEKVNDLRLLDGQGEGLDFLQG
LDLHVLDQVAQLGDRHPFLIFILASASSMAQALTPTTIQAPMPLPKPPWKPL

>gi568815597r:32913184_33136828|GENSCAN_predicted_CDS_3|699_bp
atgcccaaggagctgcagggctccatggagagagcaactgactgcctgcagtgtcctgga
tggcttccctataggaaggacgtggagctactacatcttccagacagggaaggcatccct
gagttgcagtttgaacatgaggttctagagaaccagcttcctgaagcagcacaggaagag
tgttaccaagtacgagatgacttgtttcaggtcatctggccagggctgcttagtggactc
aaaagaggtatcgagtatcaggttttggtttttgttctgctatcagaaaattttttgaag
attgcctgggagagagatggccgtggctacctcctcggagcacttaacacccagaccaac
gtggccactgtagtccccaatggcaacacacaccttgaacctggtatgctggtcagcgca
ggtctgcttttgcacgggcgtggtcttcaaaacctcatccttgagagatgcccccaggaa
aaagtcaatgatctcagactcctcgatggtcaaggagaagggctagatttcctccaggga
cttgatcttcatgtccttgaccaggtagcccaacttggtgacaggcatccattcctcatc
ttcatccttgcctctgcaagctccatggcccaggccctgaccccaaccactatccaggcc
ccaatgccactgccaaagcctccgtggaaaccactatga

>gi568815597r:32913184_33136828|GENSCAN_predicted_peptide_4|239_aa
MAPSVPAAEPEYPKGIRAVLLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGSEL
GKKLKATMDAGKLVSDEMVVELIEKNLETPLCKNGFLLDGFPRTVRQAEMLDDLMEKRKE
KLDSVIEFSIPDSLLIRRITGRLIHPKSGRSYHEEFNPPKEPMKDDITGEPLIRRSDDNE
KALKIRLQAYHTQTTPLIEYYRKRGIHSAIDASQTPDVVFASILAAFSKATCKDLVMFI

>gi568815597r:32913184_33136828|GENSCAN_predicted_CDS_4|720_bp
atggctcccagcgtgccagcggcagaacccgagtatcctaaaggcatccgggccgtgctg
ctggggcctcccggggccggtaaagggacccaggcacccagattggctgaaaacttctgt
gtctgccatttagctactggggacatgctgagggccatggtggcttctggctcagagcta
ggaaaaaagctgaaggcaactatggatgctgggaaactggtgagtgatgaaatggtagtg
gagctcattgagaagaatttggagacccccttgtgcaaaaatggttttcttctggatggc
ttccctcggactgtgaggcaggcagaaatgctcgatgacctcatggagaagaggaaagag
aagcttgattctgtgattgaattcagcatcccagactctctgctgatccgaagaatcaca
ggaaggctgattcaccccaagagtggccgttcctaccacgaggagttcaaccctccaaaa
gagcccatgaaagatgacatcaccggggaacccttgatccgtcgatcagatgataatgaa
aaggccttgaaaatccgcctgcaagcctaccacactcaaaccaccccactcatagagtac
tacaggaaacgggggatccactccgccatcgatgcatcccagacccccgatgtcgtgttc
gcaagcatcctagcagccttctccaaagccacatgtaaagacttggttatgtttatctaa

>gi568815597r:32913184_33136828|GENSCAN_predicted_peptide_5|638_aa
MKRSRCRDRPQPPPPDRREDGVQRAAELSQSLPPRRRAPPGRQRLEERTGPAGPEGKEQP
PALASQSAEIAASARPPPRLGRLLGFQKACRCWSLNPHILMALLRSLVPPDKKHPQVWRG
RPPLHLAPNVGLFSRVKVRSSVVIEDKSMRDSRRGLSQRRRRRKKKKRGSSSKKKKRRKK
RKKKKRKKRKRRKNRKKKKKRKNKRKKKRKKEEKKEEEEERRKKEEEDEEGRGRGRRKRK
RKKRKKRRSRKKKETAAAAAAGERLGKWWPGECPVECVAYFLRRRLQQRLHPARQLLLQG
MAGYLSESDFVMVEEGFSTRDLLKELTLGASQATTDEVAAFFVADLGAIVRKHFCFLKCL
PRVRPFYAVKCNSSPGVLKVLAQLGLGFSCANKAEMELVQHIGIPASKIICANPCKQIAQ
IKYAAKHGIQLLSFDNEMELAKVVKSHPSANFHIGSGCPDPQAYAQSIADARLVFEMGTE
LGHKMHVLDLGGGFPGTEGAKVRFEEIASVINSALDLYFPEGCGVDIFAELGRYYVTSAF
TVAVSIIAKKEVLLDQPGREEENGSTSKTIVYHLDEGVYGIFNSVLFDNICPTPILQKYS
SSCCMLALTHSTPFIGSSEEEMMVPAHCHAPHRDLCFG

>gi568815597r:32913184_33136828|GENSCAN_predicted_CDS_5|1917_bp
atgaagcggagccgctgccgtgaccgaccgcagccgccgccgcccgaccgccgggaggat
ggagttcagcgggcagcggagctgtctcagtctttgccgccgcgccggcgagcgccgccc
gggaggcagcggctggaggagcggacgggccccgcggggcccgagggcaaggagcagccg
cctgccttggcctcccaaagtgccgagattgcagcctctgcccggccgccaccccgtctg
ggaaggcttctgggattccagaaagcctgcaggtgttggagcctcaaccctcatatcctc
atggccctgctgaggtctcttgtcccacctgacaagaaacacccacaggtgtggaggggc
aggccaccccttcatctggcgcccaacgtggggcttttctctagggtgaaggtacgctcg
agcgtggtcattgaggacaagtcaatgagagattcccgaagaggcctatctcaaagaaga
agaaggagaaagaagaagaagagaggtagcagcagcaagaagaagaagaggaggaagaag
agaaagaagaagaagaggaagaagaggaagaggaggaagaataggaagaagaagaagaag
aggaagaacaagaggaagaagaagaggaagaaggaagaaaagaaagaagaggaagaagaa
agaagaaagaaggaggaggaagatgaagaaggaagaggaagaggaagaaggaagaggaag
aggaagaagaggaagaaaagaagaagcagaaagaagaaagaaacagcagcagcagcagca
gctggagaaaggctgggaaaatggtggccaggagagtgtccggtagagtgtgttgcatac
tttctaaggcggcggctgcagcagcggctccatccagcccgtcagctcctcctgcaaggc
atggctggctacctgagtgaatcggactttgtgatggtggaggagggcttcagtacccga
gacctgctgaaggaactcactctgggggcctcacaggccaccacggacgaggtagctgcc
ttcttcgtggctgacctgggtgccatagtgaggaagcacttttgctttctgaagtgcctg
ccacgagtccggcccttttatgctgtcaagtgcaacagcagcccaggtgtgctgaaggtt
ctggcccagctggggctgggctttagctgtgccaacaaggcagagatggagttggtccag
catattggaatccctgccagtaagatcatctgcgccaacccctgtaagcaaattgcacag
atcaaatatgctgccaagcatgggatccagctgctgagctttgacaatgagatggagctg
gcaaaggtggtaaagagccaccccagtgccaattttcacattggcagtggctgtcctgac
cctcaggcctatgctcagtccatcgcagacgcccggctcgtgtttgaaatgggcaccgag
ctgggtcacaagatgcacgttctggaccttggtggtggcttccctggcacagaaggggcc
aaagtgagatttgaagagattgcttccgtgatcaactcagccttggacctgtacttccca
gagggctgtggcgtggacatctttgctgagctggggcgctactacgtgacctcggccttc
actgtggcagtcagcatcattgccaagaaggaggttctgctagaccagcctggcagggag
gaggaaaatggttccacctccaagaccatcgtgtaccaccttgatgagggcgtgtatggg
atcttcaactcagtcctgtttgacaacatctgccctacccccatcctgcagaagtactcg
tcttcctgttgcatgctggctctcacccactccactcccttcattggctcctcagaagag
gagatgatggtcccagcccactgccacgccccccaccgggatctttgctttggctga

>gi568815597r:32913184_33136828|GENSCAN_predicted_peptide_6|226_aa
MKDKNHMIISVDGEQAFDKIQHPFMIKTFNKLGMEGMYLNMIRAIYDKLTANVILNKDPK
KPSTEQPLYSSSLWGPAVDGCDCVAEGLWLPQLHVGDWLVFDNMGAYTVGMGSPFWGTQA
CHITYAMSRVAWEALRRQLMAAEQEDDVEGVCKPLSCGWEITDTLCVGPVFTPASIIARG
LVSQVGKAVRVKQTPGGRFCFFGQCLLEQGWPRSIAVSSADSPGIP

>gi568815597r:32913184_33136828|GENSCAN_predicted_CDS_6|681_bp
atgaaggataaaaatcatatgatcatctcagtagatggagaacaagcatttgacaaaatt
cagcatcctttcatgataaaaactttcaacaaattaggtatggaaggaatgtacctcaac
atgataagggccatatatgacaagctcacagctaatgttatactcaacaaggatcctaag
aaaccatccacggagcagcccctgtacagcagcagcctgtggggcccggcggttgatggc
tgtgattgcgtggctgagggcctgtggctgccgcaactacacgtaggggactggctggtc
tttgacaacatgggcgcctacactgtgggcatgggttcccccttttgggggacccaggcc
tgccacatcacctatgccatgtcccgggtggcctgggaagcgctgcgaaggcagctgatg
gctgcagaacaggaggatgacgtggagggtgtgtgcaagcctctgtcctgcggctgggag
atcacagacaccctgtgcgtgggccctgtcttcaccccagcgagcatcattgcaaggggc
ctggtcagccaggttggcaaggcagtcagagtaaagcagacacctggtggtcgcttttgc
ttctttgggcagtgcctgttagaacagggctggccacggagtattgctgtgtccagtgcc
gacagccctggcatcccctga

>gi568815597r:32913184_33136828|GENSCAN_predicted_peptide_7|71_aa
MGGLQAAVITIPALLSSSTLLVISCINGKRAAGGPRSPAPAHHPHEGPRNSDDLLILRNI
TLYCPKDHQNG

>gi568815597r:32913184_33136828|GENSCAN_predicted_CDS_7|216_bp
atgggtggcttgcaagctgcagtgatcaccatcccggccctgctctcctcatccactctg
ctggtcatcagctgtataaatggaaaacgtgccgccggtggtcccaggtcacctgcccca
gcccaccatccccatgaggggcccagaaattctgatgacttgctgatacttcggaacatc
accctttattgtccaaaagatcaccagaatgggtaa