GENSCAN 1.0	Date run:  6-Nov-116	Time: 23:15:07

Sequence gi568815597r:31265889_31473014 : 207126 bp : 45.24% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.08 PlyA -   1422   1417    6                               1.05
 1.07 Term -   3560   3439  122  0  2  101   44    48 0.828   0.34
 1.06 Intr -   5611   5491  121  1  1  102   93    91 0.989  11.07
 1.05 Intr -  15608  15486  123  2  0   87   95   205 0.999  21.88
 1.04 Intr -  23531  23366  166  1  1  101   98    64 0.984   8.66
 1.03 Intr -  26118  26025   94  1  1   77  109   101 0.975  10.12
 1.02 Intr -  27460  27331  130  1  1   84   45   108 0.932   6.37
 1.01 Init -  30863  30723  141  2  0   90  115    89 0.936  11.93
 1.00 Prom -  53115  53076   40                              -3.06

 2.00 Prom +  56733  56772   40                              -6.66
 2.01 Init +  58872  58932   61  2  1   83   16   120 0.607   5.71
 2.02 Intr +  71287  71387  101  2  2  106   88    37 0.827   5.33
 2.03 Intr +  73069  73160   92  0  2   93   80    61 0.882   4.59
 2.04 Intr +  80752  80852  101  1  2   62   97    29 0.879   0.95
 2.05 Intr +  82941  83086  146  1  2  116   63    90 0.983   9.30
 2.06 Term +  98144  98305  162  1  0   83   54   203 0.987  14.34
 2.07 PlyA +  99593  99598    6                              -1.95

 3.07 PlyA -  99788  99783    6                               1.05
 3.06 Term - 100051  99998   54  1  0  123   43    35 0.195   0.06
 3.05 Intr - 101606 101505  102  2  0   82   99    98 0.839  10.67
 3.04 Intr - 102282 102148  135  0  0   48   27   156 0.982   6.26
 3.03 Intr - 103669 103497  173  2  2  114  115   136 0.978  18.56
 3.02 Intr - 107138 107054   85  2  1   35   97   147 0.821   9.69
 3.01 Init - 108085 107963  123  1  0  106   39    94 0.772   6.49
 3.00 Prom - 111727 111688   40                              -6.26

 4.00 Prom + 115935 115974   40                              -2.96
 4.01 Init + 120042 120114   73  2  1   39   94     3 0.152  -2.63
 4.02 Intr + 121147 122153 1007  2  2   51   56   493 0.267  32.86
 4.03 Term + 141296 141427  132  1  0  106   47   104 0.725   6.19
 4.04 PlyA + 142106 142111    6                              -0.45

 5.00 Prom + 145807 145846   40                              -6.46
 5.01 Init + 149008 149086   79  0  1   70   98    20 0.225   2.47
 5.02 Intr + 149954 150019   66  0  0   69   98    41 0.310   2.08
 5.03 Intr + 155233 155442  210  2  0   12   42   166 0.400   3.28
 5.04 Intr + 157531 157750  220  2  1   53   69    54 0.378  -2.64
 5.05 Intr + 157846 157966  121  1  1   84  113   178 0.996  20.40
 5.06 Intr + 158795 158985  191  1  2  118   72   284 0.993  28.18
 5.07 Intr + 159442 159521   80  1  2   90   22   144 0.998   7.19
 5.08 Intr + 159888 160025  138  1  0   94   82   277 0.999  28.14
 5.09 Intr + 160766 160935  170  0  2   75   99   304 0.994  29.87
 5.10 Intr + 163063 163180  118  0  1   44  119   132 0.824  11.94
 5.11 Intr + 163509 163650  142  1  1   71   80   143 0.975  11.21
 5.12 Intr + 167079 167297  219  0  0   94   51   371 0.534  31.42
 5.13 Term + 168176 168311  136  2  1   30   54   210 0.976   9.29
 5.14 PlyA + 168766 168771    6                               1.05

 6.03 PlyA - 174076 174071    6                               1.05
 6.02 Term - 175975 175848  128  2  2   93   41    61 0.616   0.34
 6.01 Init - 181712 181469  244  2  1   80   75   147 0.676  10.50
 6.00 Prom - 184464 184425   40                              -2.96

 7.00 Prom + 188907 188946   40                              -3.56
 7.01 Init + 192813 192897   85  2  1   40  116     6 0.305  -0.42
 7.02 Intr + 196739 196950  212  0  2  104   79    49 0.618   4.23
 7.03 Term + 198597 198731  135  2  0    0   47   181 0.949   3.22
 7.04 PlyA + 199553 199558    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597r:31265889_31473014|GENSCAN_predicted_peptide_1|298_aa
MIEQQKRKGPELPLVPVKRQRHELLLGAGSGPGAGQQQATPGALLQAGPPRCSSLQAPIM
LLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTD
GSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWD
IRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTG
LSLSSEGSYLLSNAMDNTASPSYWDLDVFSCLKKKRALTGSSMSSWTLPTEETASAID

>gi568815597r:31265889_31473014|GENSCAN_predicted_CDS_1|897_bp
atgatagaacagcagaagcgtaagggcccagagttgccgctggttccagtcaagcggcag
cggcatgagttgctgttgggagcggggtctggcccaggagccgggcagcagcaggcgacg
ccgggagccttgctgcaagcgggacctccaagatgttcctcccttcaagccccaatcatg
ctgctctctggacatgaaggggaagtctactgctgcaagttccaccccaacggatccacc
ttagcatctgcaggatttgaccgactgatattactgtggaatgtctatggtgactgtgat
aactatgccacactgaagggacacagtggagcagtgatggaattgcattacaacacagat
ggcagtatgcttttctcagcatccacagataaaaccgtggctgtgtgggatagtgaaaca
ggtgagagggttaaaaggctaaagggacatacttcctttgtgaattcctgttatccagcc
aggagaggccctcagcttgtctgcactggcagtgacgatggcacagttaagctttgggac
atccggaagaaagcagccatccagacatttcagaacacgtaccaggtgttagctgtgacc
ttcaatgacacaagtgatcagattatttctggtggaatagacaatgatatcaaggtctgg
gacctgcgccagaacaagctaacctacaccatgagaggccatgcagattcagtgactggc
ctgagtttaagttctgaaggctcttatcttttgtccaatgcaatggacaatacagctagc
cccagttattgggatttagatgtgttttcctgcttgaaaaagaaaagagccttaacaggt
agcagtatgtcaagttggactttgcccaccgaggaaacagcatctgccattgattga

>gi568815597r:31265889_31473014|GENSCAN_predicted_peptide_2|220_aa
MGLQVPLGTEQLGVMDNMIDGLVHRTHMSSCRVDKPSEIVDVGDKVWVKLIGREMKNDRI
KVSLSMKVVNQGTGKDLDPNNVIIEQEERRRRSFQDYTGQKITLEAVLNTTCKKCGCKGH
FAKDCFMQPGGTKYSLIPDEEEEKEEAKSAEFEKPDPTRNPSRKRKKEKKKKKHRDRKSS
DSDSSDSESDTGKRARHTSKDSKAAKKKKKKKKHKKKHKE

>gi568815597r:31265889_31473014|GENSCAN_predicted_CDS_2|663_bp
atgggcctgcaggtgcccctgggcacagaacaactgggcgtcatggacaacatgattgat
ggtctggtccatcgaactcatatgtcatcctgtcgggtggataagccctctgagatagta
gatgttggagataaagtgtgggtgaagcttattggccgagagatgaaaaatgatagaata
aaagtatccctctccatgaaggttgtcaatcaagggactgggaaagaccttgatcccaac
aatgttatcattgagcaagaagagaggcggaggcgatccttccaggattacactgggcag
aagatcacccttgaggctgtcttgaacactacctgcaagaagtgtggctgtaaaggccac
tttgcaaaagattgtttcatgcaaccaggtgggactaaatactctctgatacctgatgag
gaagaggaaaaggaagaggcaaagtcagcagagtttgagaagcctgaccctacaaggaat
ccttctagaaaaagaaagaaggagaagaagaaaaagaaacatagagataggaagtcatct
gactctgacagctcagactctgagagtgatacaggcaagagggcaaggcacacatcaaaa
gacagcaaggcagcaaagaagaagaaaaagaagaagaagcacaagaagaagcacaaggag
tga

>gi568815597r:31265889_31473014|GENSCAN_predicted_peptide_3|223_aa
MGLEELTELAEFLQEGSWERPELKLGAVRRNRKSPEHLQGRPSITMVDAFLGTWKLVDSK
NFDDYMKSLGVGFATRQVASMTKPTTIIEKNGDILTLKTHSTFKNTEISFKLGVEFDETT
ADDRKVKERELEELPNENQLMYVCWQHPELRNHFKGIQSQDFVVAALLLAKESIVTLDGG
KLVHLQKWDGQETTLVRELIDGKLILTLTHGTAVCTRTYEKEA

>gi568815597r:31265889_31473014|GENSCAN_predicted_CDS_3|672_bp
atgggccttgaagagctgaccgaattggcagaatttctgcaggaggggagctgggaacga
cctgagctaaagctcggagctgtgcgaagaaaccggaaaagcccagagcacttgcagggg
cggcccagcatcactatggtggacgctttcctgggcacctggaagctagtggacagcaag
aatttcgatgactacatgaagtcactcggtgtgggttttgctaccaggcaggtggccagc
atgaccaagcctaccacaatcatcgaaaagaatggggacattctcaccctaaaaacacac
agcaccttcaagaacacagagatcagctttaagttgggggtggagttcgatgagacaaca
gcagatgacaggaaggtcaaggaaagagagctggaagagctgccaaatgagaaccagctg
atgtatgtatgctggcagcacccagagctgaggaaccacttcaagggcatccagtcacag
gactttgtggttgctgccctcttgttggctaaagagtccattgtgacactggatggaggg
aaacttgttcacctgcagaaatgggacgggcaagagaccacacttgtgcgggagctaatt
gatggaaaactcatcctgacactcacccacggcactgcagtttgcactcgcacttatgag
aaagaggcatga

>gi568815597r:31265889_31473014|GENSCAN_predicted_peptide_4|403_aa
MLLDPGVSDCTWHQRLGQRPAAGPDTSTQRTSPSTPRHIPTDDLTHTPRHFHTDDITHTP
RPIHTDDLTIHTPRHIHTDDLTHTPRHNHTDDLTHTPRHIHTDDHTIDTPRHIHTDDHTI
DTPRHIHTDDHTIDTPRHIHTDDLTIHTQTYPHRGPHHPHADTSPQTSLSTPRHIHTDDL
TIHTQTHPHRGPHHPHPDTSPQRTSPSTPRHVPTEDLTIHTQTHPHRRPHHPHPDTSPRM
TSPSTPRHIPTDDLTIHTPRHIHTDDLTHTPRHIHTDDLTHIPRHVHTDDLIHTPRHIHA
DDLTHTSRHIHMDDLTHISSPHTWHQRLGQRPAAGPWWTIHTQPLHRRLQNWQDPVQSEN
ETASHTLAAGRMTPLGLSVSKPQVTEFLVPYAALGLVAALPRS

>gi568815597r:31265889_31473014|GENSCAN_predicted_CDS_4|1212_bp
atgctcctagacccaggagtcagtgactgcacctggcatcagagactggggcagaggcct
gcagctggcccagacacatccacacagaggacctcaccatccacacccagacacatcccc
acggacgacctcacccacacccccagacacttccacacagatgacatcacccacaccccc
aggcccatccacacagatgacctcaccatccacacccccagacacatccacacagacgac
ctcacccacacccccaggcacaaccacacagacgacctcacccacacccccagacacatc
cacacagatgaccacaccatcgacacccccagacacatccacacagatgaccacaccatc
gacacccccagacacatccacacagatgaccacaccatcgatacccccagacacatccac
acagatgacctcaccatccacactcagacatatccccacagaggacctcaccatccacac
gcagacacatccccacagacctcactatccacacccagacacatccacacagacgacctc
accatccacacccagacacatccccacagaggacctcaccatccacacccagacacatcc
ccacagaggacctcaccatccacacccagacacgtccccacagaggacctcaccatccac
acccagacacatccacacagacgacctcaccatccacacccagacacatccccacggatg
acctcaccatccacacccagacacatccccacggatgacctcaccatccacacccccaga
cacatccacacagatgacctcacccacaccccgagacacatccacacggacgacctcacc
cacatccccagacacgtccacacagacgacctcatccacacccccagacacatccatgca
gatgatctcacccacacatccagacacatccacatggacgacctcacccacatatcctca
ccacatacgtggcatcagagactagggcagaggcctgcagctggcccatggtggaccata
cacacacagcccctacacagaaggctacaaaattggcaggatccagtgcaaagtgaaaat
gaaacagcctcccacactctcgctgctggccggatgacgccgcttggcctgagcgtgtcc
aagcctcaggtgacagagttcctggtcccttatgctgccctggggctggtggctgccctt
cctcgatcctaa

>gi568815597r:31265889_31473014|GENSCAN_predicted_peptide_5|629_aa
MLLGDEAQFLAYRECSLWELLLTSRKGVTHLLIVLLSIGTGLKVNWAEVAALDSHRSANP
IVNCACEGSKLRASYENLIPDDQRWNSFIPKPYLPPASTPAAICGKSVFPEIGSWYQKER
NSVTSASSRFQATVSLEIDPGLNLGSVVTGCVALYDPASLSDLKVQWAGVWGTVCSCLAQ
HRCADLWAGGESCCPASRNSTVSRLIFTFFLFLGVLVSIIMLSPGVESQLYKLPWVCEEG
AGIPTVLQGHIDCGSLLGYRAVYRMCFATAAFFFFFTLLMLCVSSSRDPRAAIQNGFWFF
KFLILVGLTVGAFYIPDGSFTNIWFYFGVVGSFLFILIQLVLLIDFAHSWNQRWLGKAEE
CDSRAWYAGLFFFTLLFYLLSIAAVALMFMYYTEPSGCHEGKVFISLNLTFCVCVSIAAV
LPKVQGSYQGSSCQDAQPNSGLLQASVITLYTMFVTWSALSSIPEQKCNPHLPTQLGNET
VVAGPEGYETQWWDAPSIVGLIIFLLCTLFISLRSSDHRQVNSLMQTEECPPMLDATQQQ
QQVAACEGRAFDNEQDGVTYSYSFFHFCLVLASLHVMMTLTNWYKPGETRKMISTWTAVW
VKICASWAGLLLYLWTLVAPLLLRNRDFS

>gi568815597r:31265889_31473014|GENSCAN_predicted_CDS_5|1890_bp
atgctgttgggagatgaggcacagttcctggcatatcgtgagtgctccttgtgggaatta
ttgctaacatcaaggaaaggtgtgactcatctgctgattgtgcttctcagcattggaact
gggctgaaggtgaactgggctgaagtggcagcattagattctcataggagtgcgaaccct
attgtgaactgtgcatgcgagggatccaagttgcgtgcttcttatgagaatctaattcct
gatgatcagaggtggaacagtttcatcccaaaaccatatctgccccctgccagcacccct
gctgccatctgtggaaaaagtgtcttccctgaaattggctcctggtaccagaaagaaaga
aacagcgtgacctcggctagctctcgctttcaagccacagtatcactggagatagaccca
ggtttgaatctgggttctgtggttactggctgtgtagccctatatgacccagcctccctc
tcggacctgaaagttcaatgggctggtgtctggggaacagtgtgctcctgcctagcgcag
cacagatgcgccgacctctgggcaggtggtgagagctgctgccccgccagccgcaactcc
accgtgagccgcctcatcttcacgttcttcctcttcctgggggtgctggtgtccatcatt
atgctgagcccgggcgtggagagtcagctctacaagctgccctgggtgtgtgaggagggg
gccgggatccccaccgtcctgcagggccacatcgactgtggctccctgcttggctaccgc
gctgtctaccgcatgtgcttcgccacggcggccttcttcttctttttcaccctgctcatg
ctctgcgtgagcagcagccgggacccccgggctgccatccagaatgggttttggttcttt
aagttcctgatcctggtgggcctcaccgtgggtgccttctacattcctgacggctccttc
accaacatctggttctacttcggcgtcgtgggctccttcctcttcatcctcatccagctg
gtgctgctcatcgactttgcgcactcctggaaccagcggtggctgggcaaggccgaggag
tgcgattcccgtgcctggtacgcaggcctcttcttcttcactctcctcttctacttgctg
tcgatcgcggccgtggcgctgatgttcatgtactacactgagcccagcggctgccacgag
ggcaaggtcttcatcagcctcaacctcaccttctgtgtctgcgtgtccatcgctgctgtc
ctgcccaaggtccaggggtcttaccaggggtcctcttgccaggacgcccagcccaactcg
ggtctgctgcaggcctcggtcatcaccctctacaccatgtttgtcacctggtcagcccta
tccagtatccctgaacagaaatgcaacccccatttgccaacccagctgggcaacgagaca
gttgtggcaggccccgagggctatgagacccagtggtgggatgccccgagcattgtgggc
ctcatcatcttcctcctgtgcaccctcttcatcagtctgcgctcctcagaccaccggcag
gtgaacagcctgatgcagaccgaggagtgcccacctatgctagacgccacacagcagcag
cagcaggtggcagcctgtgagggccgggcctttgacaacgagcaggacggcgtcacctac
agctactccttcttccacttctgcctggtgctggcctcactgcacgtcatgatgacgctc
accaactggtacaagcccggtgagacccggaagatgatcagcacgtggaccgccgtgtgg
gtgaagatctgtgccagctgggcagggctgctcctctacctgtggaccctggtagcccca
ctcctcctgcgcaaccgcgacttcagctga

>gi568815597r:31265889_31473014|GENSCAN_predicted_peptide_6|123_aa
MKEMQIKITRYFYTPALDLGSPLTEVRDIGYLSIMALDTFTTYTFVWLLDLRPPPPPDLS
PLMASVTSAADPCVNKACYRIGFPMAAAESTNVHSDGQPVNQETRRLLNTFSLSGSVLGT
GKL

>gi568815597r:31265889_31473014|GENSCAN_predicted_CDS_6|372_bp
atgaaggagatgcagattaaaatcacaagatacttctatacccctgctttggacctcggc
tcacccctaacggaagtgcgtgacattggctatctttctatcatggcccttgacacattt
acaacgtacacgtttgtgtggctactggatttacgtccacctcctccaccagatctcagc
cccctaatggcaagtgtgacatctgctgctgatccttgtgtaaacaaggcctgctataga
ataggctttcccatggctgctgcagaatcaactaatgttcattcagatggtcagccagtc
aatcaagaaacccgacgcttgctgaataccttctctttatcaggctctgttctaggcact
gggaaactataa

>gi568815597r:31265889_31473014|GENSCAN_predicted_peptide_7|143_aa
MNKPGLLATRGKKGLQHCCDQVILCTYQEKPFHLFVNVDNGVALGVLTQEHGGCRQPVAF
LSKVLDPVACRWPQRIQSIVATVILVEESRKLTFGGYLTNFQYTSTSLGTIKGRKEAKLE
PAWEGPYLVLLTTETAIGTAEKG

>gi568815597r:31265889_31473014|GENSCAN_predicted_CDS_7|432_bp
atgaataaacccgggctcttagcaacacggggaaagaagggcttgcaacactgctgtgac
caggtaattctgtgcacataccaagaaaaaccatttcatctttttgttaacgtagataat
ggagtggctctaggagtgcttacccaagaacatgggggctgccgacagccagtggccttc
ctgtcaaaagttctagatccagtcgcctgcagatggcctcagcgtattcaatccattgtg
gccacggtgatattggttgaagaaagcaggaaattaacttttggaggatatctgacaaat
ttccagtacaccagcaccagcctggggaccatcaaaggacggaaagaagcaaaactcgag
ccagcctgggaaggaccctacctcgtgctgctaaccaccgagactgccattggcacagca
gaaaaaggatga