GENSCAN 1.0	Date run:  7-Nov-116	Time: 21:25:35

Sequence gi568815597r:25194167_25394643 : 200477 bp : 45.95% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.05 Intr -   3538   3465   74  0  2   79   76    97 0.017   6.65
 1.04 Intr -   3728   3579  150  1  0   72   31   100 0.038   1.98
 1.03 Intr -   6481   6367  115  2  1   38   68    82 0.103   0.71
 1.02 Intr -   7684   7608   77  0  2   39   98    83 0.184   3.56
 1.01 Init -  17877  17816   62  0  2   77   76    65 0.197   4.92
 1.00 Prom -  24605  24566   40                              -3.96

 2.10 PlyA -  26038  26033    6                               1.05
 2.09 Term -  29265  29100  166  2  1   99   36   243 0.993  17.59
 2.08 Intr -  30934  30836   99  0  0   77   98    55 0.961   4.63
 2.07 Intr -  33366  33276   91  1  1   79   98    81 0.995   7.25
 2.06 Intr -  34069  33952  118  1  1   91   71   133 0.999  11.94
 2.05 Intr -  34957  34832  126  1  0   67   72   107 0.994   7.88
 2.04 Intr -  38045  37938  108  2  0  100  100   187 0.999  21.58
 2.03 Intr -  49467  49384   84  0  0   49  101    87 0.963   6.12
 2.02 Intr -  51135  50984  152  1  2  118  100   121 0.996  16.18
 2.01 Init -  52797  52278  520  0  1   69   98   448 0.921  38.93
 2.00 Prom -  59514  59475   40                              -4.96

 3.00 Prom +  68334  68373   40                              -3.26
 3.01 Init +  78382  78529  148  0  1   60  100    94 0.473   6.17
 3.02 Intr +  89742  89801   60  1  0  111  100    -2 0.237   2.01
 3.03 Intr +  90407  90593  187  0  1   27   72   247 0.366  15.75
 3.04 Intr +  96475  96625  151  1  1  100   92   143 0.933  16.06
 3.05 Intr +  97495  97626  132  0  0    0  116    86 0.884   3.44
 3.06 Intr + 106780 106927  148  0  1   80   82   134 0.679  11.81
 3.07 Intr + 107354 107520  167  0  2   84  105   126 0.974  13.58
 3.08 Intr + 109156 109293  138  0  0   95  111    49 0.996   8.56
 3.09 Intr + 112430 112563  134  1  2   65   34   204 0.970  12.14
 3.10 Intr + 122834 122913   80  2  2  122   82    68 0.881   8.79
 3.11 Intr + 157460 157527   68  0  2   78   99    87 0.555   7.42
 3.12 Term + 167889 167930   42  2  0  113   41    24 0.090  -2.64
 3.13 PlyA + 168081 168086    6                               1.05

 4.07 PlyA - 168165 168160    6                               1.05
 4.06 Term - 175270 175125  146  2  2   78   47    28 0.211  -4.23
 4.05 Intr - 181262 181183   80  1  2  122   82    63 0.896   8.29
 4.04 Intr - 191678 191545  134  2  2   78   34   151 0.979   8.14
 4.03 Intr - 194947 194810  138  1  0   95  111    50 0.995   8.66
 4.02 Intr - 196749 196583  167  1  2   84   89    62 0.933   5.58
 4.01 Intr - 197975 197828  148  2  1   80   82    98 0.810   8.21

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597r:25194167_25394643|GENSCAN_predicted_peptide_1|160_aa
MALMVLHQEVTYEFPGTAVKRLYEKHGANICSASGEDLRKLTIMVEGADFRSVRALWLGT
VVVLALQTREQRLRGLRYRFQTTLLFKASLVAHKGFSSSYCLIIMAINQRANDPPRALDL
SWRCHQRGLWLLSTRANLDFRARKFSGVSQGLADILEVPX

>gi568815597r:25194167_25394643|GENSCAN_predicted_CDS_1|480_bp
atggcgctgatggtcctccatcaggaagtgacatacgagtttcctgggactgctgtaaaa
aggctgtatgagaagcatggtgccaacatctgctcggcttctggtgaggacctcaggaag
cttacaatcatggtggaaggagctgattttcggagcgtgagagccctatggctgggcact
gtggtggtccttgccctccagacaagggagcaaaggctcagaggtttacgctaccggttc
cagaccacactgctatttaaagcttcattagtggcccacaaggggttctcaagcagctac
tgcctcatcatcatggccattaaccagcgtgcaaatgacccgccgagggccctcgacctg
tcatggcgctgtcaccagcgtggtttatggcttctgagcaccagagcaaatctggacttt
agagctcgtaaattcagcggggtgtcccaggggctggctgacatcttggaggtgccggnn

>gi568815597r:25194167_25394643|GENSCAN_predicted_peptide_2|487_aa
MSNYVNDMWPGSPQEKDSPSTSRSGGSSRLSSRSRSRSFSRSSRSHSRVSSRFSSRSRRS
KSRSRSRRRHQRKYRRYSRSYSRSRSRSRSRRYRERRYGFTRRYYRSPSRYRSRSRSRSR
SRGRSYCGRAYAIARGQRYYGFGRTVYPEEHSRWRDRSRTRSRSRTPFRLSEKDRMELLE
IAKTNAAKALGTTNIDLPASLRTVPSAKETSRGIGVSSNGAKPELSEKVTEDGTRNPNEK
PTQQRSIAFSSNVLVDSAEEGSLAAAAELAAQKREQRLRKFRELHLMRNEARKLNHQEVV
EEDKRLKLPANWEAKKARLEWELKEEEKKKECAARGEDYEKVKLLEISAEDAERWERKKK
RKNPDLGFSDYAAAQLRQYHRLTKQIKPDMETYERLREKHGEEFFPTSNSLLHGTHVPST
EEIDRMVIDLEKQIEKRDKYSRRRPYNDDADIDYINERNAKFNKKAERFYGKYTAEIKQN
LERGTAV

>gi568815597r:25194167_25394643|GENSCAN_predicted_CDS_2|1464_bp
atgtccaactacgtgaacgacatgtggccgggctcgccgcaggagaaggattcgccctcg
acctcgcggtcgggcgggtccagccggctgtcgtcgcggtctaggagccgctctttttcc
agaagctctcggtcccattcccgcgtctcgagccggttttcgtccaggagtcggaggagc
aagtccaggtcccgttcccgaaggcgccaccagcggaagtacaggcgctactcgcggtca
tactcgcggagccggtcgcgatcccgcagccgccgttaccgagagaggcgctacgggttc
accaggagatactaccggtctccttcgcggtaccggtcccggtcccgtagcaggtcgcgc
tctcggggaaggtcgtactgcggaagggcgtacgcgatcgcgcggggacagcgctactac
ggctttggtcgcacagtgtacccggaggagcacagcagatggagggacagatccaggacg
aggtcgcggagcagaaccccctttcgcttaagtgaaaaagatcgaatggagctgttagaa
atagcaaaaaccaatgcagcgaaagctctaggaacaaccaacattgacttgccagctagt
ctcagaactgttccttcagccaaagaaacaagccgtggaataggtgtatcaagtaatggt
gcaaagcctgaactgtcggaaaaggtaacagaagatggaactcgaaatcccaatgaaaaa
cctacccagcaaagaagcatagcttttagctctaatgtgctggtggacagcgcggaggag
gggtccctcgctgcggcggcggagctggccgctcagaagcgcgaacagagactgcgcaaa
ttccgggagctgcacctgatgcggaatgaagctcgtaaattaaatcaccaggaagttgtg
gaagaagataaaagactaaaattacctgcaaattgggaagccaaaaaagctcgtttggag
tgggaactaaaggaagaggaaaagaaaaaggaatgtgcggcaagaggagaagactatgag
aaagtgaagttgctggagatcagtgcagaagatgcagaaagatgggagaggaaaaagaag
aggaaaaaccctgatctgggattttcagattatgctgctgcccagttacgccagtatcat
cggttgaccaagcagatcaaacctgacatggaaacatatgagagactgagagaaaaacat
ggagaagagtttttcccaacatccaatagtcttcttcatggaacacatgtgccttccaca
gaggaaattgacaggatggtcatagatctggaaaaacagattgaaaaacgagacaaatat
agccggagacgtccttataatgatgatgcagatatcgactacattaatgaaaggaatgcc
aaattcaacaagaaagctgaaagattctatgggaaatacacagctgaaattaaacagaat
ttggaaagaggaacagctgtctaa

>gi568815597r:25194167_25394643|GENSCAN_predicted_peptide_3|484_aa
MSSKYPRSVRRCLPLWALTLEAALILLFYFFTHYDASLEDQKGLVASYQGASLPLTCHSS
LCSGSETGKVGQDLTVMAAIGLGFLTSSFRRHSWSSVAFNLFMLALGVQWAILLDGFLSQ
FPSGKVVITLFSIRLATMSALSVLISVDAVLGKVNLAQLVVMVLVEVTALGNLRMVISNI
FNSLTSSGSSKFVQPASSFSQCVSVTAYVLSLGEPVESLNLKAAVKTDYHMNMMHIYVFA
AYFGLSVAWCLPKPLPEGTEDKDQTATIPSLSAMLGALFLWMFWPSFNSALLRSPIERKN
AVFNTYYAVAVSVVTAISGSSLAHPQGKISKTYVHSAVLAGGVAVGTSCHLIPSPWLAMV
LGLVAGLISVGGAKYLPGCCNRVLGIPHSSIMGYNFSLLGLLGEIIYIVLLVLDTVGAGN
GMIGFQVLLSIGELSLAIVIALMSGLLTGLMQYRMDKSEVIVTVKVVWVKQCNSEYAQGM
PATL

>gi568815597r:25194167_25394643|GENSCAN_predicted_CDS_3|1455_bp
atgagctctaagtacccgcggtctgtccggcgctgcctgcccctctgggccctaacactg
gaagcagctctcattctcctcttctatttttttacccactatgacgcttccttagaggat
caaaaggggctcgtggcatcctatcaaggtgcgtctcttccactcacctgccacagcagc
ctctgctcagggtctgagaccgggaaagttggccaagatctgaccgtgatggcggccatt
ggcttgggcttcctcacctcgagtttccggagacacagctggagcagtgtggccttcaac
ctcttcatgctggcgcttggtgtgcagtgggcaatcctgctggacggcttcctgagccag
ttcccttctgggaaggtggtcatcacactgttcagtattcggctggccaccatgagtgct
ttgtcggtgctgatctcagtggatgctgtcttggggaaggtcaacttggcgcagttggtg
gtgatggtgctggtggaggtgacagctttaggcaacctgaggatggtcatcagtaatatc
ttcaacagcctcaccagcagtgggtccagcaagtttgtacagccagcatcttctttcagt
cagtgcgtgtcagtaactgcatatgtcctctcattgggagagcctgtcgaaagtctaaat
ttgaaggcagctgtgaagacagactaccacatgaacatgatgcacatctacgtgttcgca
gcctattttgggctgtctgtggcctggtgcctgccaaagcctctacccgagggaacggag
gataaagatcagacagcaacgatacccagtttgtctgccatgctgggcgccctcttcttg
tggatgttctggccaagtttcaactctgctctgctgagaagtccaatcgaaaggaagaat
gccgtgttcaacacctactatgctgtagcagtcagcgtggtgacagccatctcagggtca
tccttggctcacccccaagggaagatcagcaagacttatgtgcacagtgcggtgttggca
ggaggcgtggctgtgggtacctcgtgtcacctgatcccttctccgtggcttgccatggtg
ctgggtcttgtggctgggctgatctccgtcgggggagccaagtacctgccggggtgttgt
aaccgagtgctggggattccccacagctccatcatgggctacaacttcagcttgctgggt
ctgcttggagagatcatctacattgtgctgctggtgcttgataccgtcggagccggcaat
ggcatgattggcttccaggtcctcctcagcattggggaactcagcttggccatcgtgata
gctctcatgtctggtctcctgacaggattaatgcagtatcgaatggacaagtccgaggtg
atagttacagtgaaggttgtctgggtcaaacagtgcaattcagaatatgctcagggaatg
ccagccaccttgtaa

>gi568815597r:25194167_25394643|GENSCAN_predicted_peptide_4|270_aa
TDYHMNLRHFYVFAAYFGLTVAWCLPKPLPKGTEDNDQRATIPSLSAMLGALFLWMFWPS
VNSALLRSPIQRKNAMFNTYYALAVSVVTAISGSSLAHPQRKISMTYVHSAVLAGGVAVG
TSCHLIPSPWLAMVLGLVAGLISIGGAKCLPVCCNRVLGIHHISVMHSIFSLLGLLGEIT
YIVLLVLHTVWNGNGMIGFQVLLSIGELSLAIVIALTSGLLTGHPLVNAVGRLDQQGPVL
SQQVQANSGQAAARCCAFVSGRSKTGTQAF

>gi568815597r:25194167_25394643|GENSCAN_predicted_CDS_4|813_bp
acagactaccacatgaacctgaggcacttctacgtgttcgcagcctattttgggctgact
gtggcctggtgcctgccaaagcctctacccaagggaacggaggataatgatcagagagca
acgatacccagtttgtctgccatgctgggcgccctcttcttgtggatgttctggccaagt
gtcaactctgctctgctgagaagtccaatccaaaggaagaatgccatgttcaacacctac
tatgctctagcagtcagtgtggtgacagccatctcagggtcatccttggctcacccccaa
aggaagatcagcatgacttatgtgcacagtgcggtgttggcaggaggcgtggctgtgggt
acctcgtgtcacctgatcccttctccgtggcttgccatggtgctgggtcttgtggctggg
ctgatctccatcgggggagccaagtgcctgccggtgtgttgtaaccgagtgctggggatt
caccacatctccgtcatgcactccatcttcagcttgctgggtctgcttggagagatcacc
tacattgtgctgctggtgcttcatactgtctggaacggcaatggcatgattggcttccag
gtcctcctcagcattggggaactcagcttggccatcgtgatagctctcacgtctggtctc
ctgacaggccatcctctagtcaatgctgtgggtaggctggaccagcagggaccagtattg
tcacagcaagtccaggccaacagtggtcaggctgctgcccggtgttgtgcctttgtgagt
ggcagatccaagaccggaacccaggccttctga