GENSCAN 1.0	Date run:  6-Nov-116	Time: 00:51:33

Sequence gi568815597r:112813894_113029308 : 215415 bp : 44.07% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +  17482  17641  160  0  1   66   99    60 0.755   4.89
 1.02 Intr +  17883  18073  191  1  2   34   64    82 0.616  -0.30
 1.03 Term +  22945  23121  177  0  0   56   32   128 0.625   1.69
 1.04 PlyA +  24921  24926    6                               1.05

 2.03 PlyA -  25336  25331    6                               1.05
 2.02 Term -  36120  35920  201  0  0  115   37   130 0.972   7.99
 2.01 Init -  40736  40533  204  2  0   97   44   150 0.684  10.62
 2.00 Prom -  63572  63533   40                               0.54

 3.03 PlyA -  63582  63577    6                               1.05
 3.02 Term -  73912  73784  129  1  0  141   55   104 0.818  10.58
 3.01 Init -  82020  82000   21  0  0   60  113    27 0.484   1.24
 3.00 Prom -  88294  88255   40                              -2.06

 4.03 PlyA -  88612  88607    6                               1.05
 4.02 Term - 100272  99998  275  1  2   61   41   318 0.758  20.03
 4.01 Init - 104113 103285  829  1  1   71   48   411 0.985  30.28
 4.00 Prom - 105937 105898   40                              -8.66

 5.00 Prom + 106758 106797   40                              -7.16
 5.01 Init + 108028 108037   10  0  1   63   99     8 0.606   0.01
 5.02 Intr + 108517 108585   69  2  0   83   50    54 0.320   0.25
 5.03 Term + 109580 110451  872  0  2  -53   47  1152 0.631  89.80
 5.04 PlyA + 112148 112153    6                               1.05

 6.04 PlyA - 114820 114815    6                               1.05
 6.03 Term - 142967 142674  294  2  0   48   38   123 0.019  -1.39
 6.02 Intr - 153865 153689  177  1  0   57   68    93 0.155   4.32
 6.01 Intr - 185324 185164  161  0  2   54   46   150 0.554   7.11

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597r:112813894_113029308|GENSCAN_predicted_peptide_1|175_aa
MWTHLASHRDWTAPTGLYRICGHRAYAKLPDQWAGSCVIDTIKPSFFLLPIKTAWQETQK
RNAIHKNRLALDYLLAAEGGVCGKFNLTNCCLHIDDQGQVVEDIVKDITKLAHVPVQLSK
HQVGVTTIQFSSATNDPEFVSDCKALKAQSHKTTFTVDGIFKYQAATCASKVNWL

>gi568815597r:112813894_113029308|GENSCAN_predicted_CDS_1|528_bp
atgtggacccacctggcatcccaccgggactggacagcccccactggattataccggata
tgtgggcatagagcctatgccaagttacctgaccaatgggcaggtagttgtgttattgac
accattaaaccatcctttttcctactgcccataaaaacagcctggcaagaaacccagaag
agaaatgctattcataaaaatagactagccctagactacttgctagcagctgaaggaggg
gtctgtggaaagtttaacctgaccaattgctgtctgcacatagatgaccaagggcaagta
gttgaagatatagttaaagatataacaaagctggcacatgtgcctgtgcagctctccaaa
caccaagtgggtgtcactacaattcagttcagttctgccactaacgacccagagttcgtg
tcagactgcaaagccttaaaggctcagtcccacaagactactttcactgtagatggtatt
ttcaagtaccaggctgccacttgtgcttctaaggtcaactggctataa

>gi568815597r:112813894_113029308|GENSCAN_predicted_peptide_2|134_aa
MPEPPTHSMGSYAAGASPMSAAPCSTVLSPIDHLRAEECGRTARNWQAAPPAAPCGIHWV
KPVGLLSLKLRGETDVCVPDACRWRRRSRETRGENQSVRAAVRSPDQAFHALVSGSRGRE
GRLRPQCAGSAGGA

>gi568815597r:112813894_113029308|GENSCAN_predicted_CDS_2|405_bp
atgcctgagcctcccacccactccatgggctcctatgcggccggagcctccccgatgagc
gccgccccctgctccacggtgctcagtcccatcgaccacctaagggctgaggagtgcggg
cgcacggcgcggaactggcaggcagctccacctgcagccccgtgcgggatccactgggtg
aagccagttgggctcctgagtctgaaactaaggggtgagaccgacgtttgtgtgccggac
gcgtgcaggtggcggcgacgctcccgggagacgcggggggagaaccagtctgtgcgcgcg
gctgtgagaagccccgaccaagctttccacgcgcttgtttcgggcagcagaggacgcgag
ggccgactgcgtccccagtgcgcaggctcggccgggggcgcgtaa

>gi568815597r:112813894_113029308|GENSCAN_predicted_peptide_3|49_aa
MKPRTLTVVTGHWMLLQEKACICMALLARKNQPKQQEGGLCLFHLPNLM

>gi568815597r:112813894_113029308|GENSCAN_predicted_CDS_3|150_bp
atgaagccacggaccctcacggtggtaactggacactggatgctgctgcaggaaaaagcg
tgcatctgtatggccctgcttgccagaaagaaccagccaaagcagcaggaaggcggactc
tgcctcttccaccttccaaatctcatgtga

>gi568815597r:112813894_113029308|GENSCAN_predicted_peptide_4|367_aa
MIGKYFYKRRPLANGLAMAGSPVFLCTLAPLNQVFFGIFGWRGSFLILGGLLLNCCVAGA
LMRPIGPKPTKAGKDKSKASLEKAGKSGVKKDLHDANTDLIGRHPKQEKRSVFQTINQFL
DLTLFTHRGFLLYLSGNVIMFFGLFAPLVFLSSYGKSQHYSSEKSAFLLSILAFVDMVAR
PSMGLVANTKPIRPRIQYFFAASVVANGVCHMLAPLSTTYVGFCVYAGFFGFAFGWLSSV
LFETLMDLVGPQRFSSAVGLVTIVECCPVLLGPPLLGRLNDMYGDYKYTYWACGVVLIIS
GIYLFIGMGINYRLLAKEQKANEQKKESKEEETSIDVAGKPNEVTKAAESPDQKDTDGGP
KEEESPV

>gi568815597r:112813894_113029308|GENSCAN_predicted_CDS_4|1104_bp
atgattggcaagtatttctacaagaggcgaccattggccaacggactggccatggcaggc
agccctgtgttcctctgtactctggcccccctcaatcaggttttcttcggtatctttgga
tggagaggaagctttctaattcttgggggcttgctactaaactgctgtgttgctggagcc
ctcatgcgaccaatcgggcccaagccaaccaaggcagggaaagataagtctaaagcatcc
cttgagaaagctggaaaatctggtgtgaaaaaagatctgcatgatgcaaatacagatctt
attggaagacaccctaaacaagagaaacgatcagtcttccaaacaattaatcagttcctg
gacttaaccctattcacccacagaggctttttgctatacctctctggaaatgtgatcatg
ttttttggactctttgcacctttggtgtttcttagtagttatgggaagagtcagcattat
tctagtgagaagtctgccttccttctttccattctggcttttgttgacatggtagcccga
ccatctatgggacttgtagccaacacaaagccaataagacctcgaattcagtatttcttt
gcggcttccgttgttgcaaatggagtgtgtcatatgctagcacctttatccactacctat
gttggattctgtgtctatgcgggattctttggatttgccttcgggtggctcagctccgta
ttgtttgaaacattgatggaccttgttggaccccagaggttctccagcgctgtgggattg
gtgaccattgtggaatgctgtcctgtcctcctggggccaccacttttaggtcggctcaat
gacatgtatggagactacaaatacacatactgggcatgtggcgtcgtcctaattatttca
ggtatctatctcttcattggcatgggcatcaattatcgacttttggcaaaagaacagaaa
gcaaacgagcagaaaaaggaaagtaaagaggaagagaccagtatagatgttgctgggaag
ccaaatgaagttaccaaagcagcagaatctccggaccagaaagacacagatggagggccc
aaggaggaggaaagtccagtctga

>gi568815597r:112813894_113029308|GENSCAN_predicted_peptide_5|316_aa
MNAGQAENTLVMDVHKVLDVSRIRLTFTRAFLEHGHTKIDTAFVYSDSQSKTILGGLKID
TKANPLFGNSLKPDSLRFQLETSLKWLQCPRVDLFYLLRPDHSTPVEETLSACHQLHQEG
KFLDLGLSNYATWEVAKICNLCKSNGWTLPTVYQGMYNATTQQVKTELFPCLRHSGLRFY
AFNPLAGDLLTGKYKYKDKDRKQPMGRFFGTQWAEIYRNRFWKKHHFDGIALVEKALQAA
YGASAPSMTSAALWWMYHHSQLQGAHGDAVILGMSSLEQLEQNLAAAEEGPLEPDVVEAF
NQAWQLVAHECPNYFH

>gi568815597r:112813894_113029308|GENSCAN_predicted_CDS_5|951_bp
atgaatgcagggcaggctgaaaacaccttggtaatggatgttcacaaggttcttgatgta
tctaggatacgattaacattcacccgcgccttcctggagcacggccacaccaagatagac
acggccttcgtgtacagcgacagccagtccaagaccatcctgggtggcctgaaaattgat
accaaggccaatccattgtttgggaactccctgaaacctgacagtctccggttccagctg
gagacgtcactgaagtggctgcagtgtccccgagtggacctcttctacctgctcaggcca
gaccacagcaccccggtggaagagacactgagtgcctgccaccagctgcaccaggagggc
aagttcctggatcttggcctctccaactatgccacctgggaagtggccaagatctgtaac
ctctgcaagagcaatggctggaccctgcccactgtgtaccagggcatgtacaacgccacc
acccagcaggtgaaaacggagctcttcccctgcctcaggcactctggactgaggttctat
gccttcaaccctctggctggggacctgctgactggcaagtacaagtataaggacaaggac
aggaaacagcccatgggccgcttctttgggactcaatgggcagagatctacaggaatcgc
ttctggaagaagcaccacttcgatggcattgccctggtagagaaggccctgcaggccgcg
tatggcgccagcgcccccagcatgacctcggctgccctctggtggatgtaccaccactca
cagctgcagggtgcccacggggacgcagtcatcctgggcatgtccagcttggagcagttg
gagcagaacttggcagcggcagaggaagggcccctggagccagatgttgtggaggccttt
aatcaagcctggcaattggttgctcacgaatgtcccaactacttccactag

>gi568815597r:112813894_113029308|GENSCAN_predicted_peptide_6|210_aa
XRENVAIRFLPVYRKQRITNTVSVATKETDCLENDLHSSADALVVPAPGESVHMCSSMKV
QVEHPGLDPQADGYTKPVTVMLEASFAACTPQLNHSRLDVQLSNNSNYLLLLWDLPMSLR
GRFYYCRHFRGRKQARRVGELPEVTELVSGPDWNPNTSQPMPGSTAPAPSVFPGASGTRI
HSNAAHSPLLSRFPLLRTRISPTRQGQASR

>gi568815597r:112813894_113029308|GENSCAN_predicted_CDS_6|633_bp
naaagagagaatgtcgccatcagatttttgcctgtctaccgaaaacaaaggataacaaac
actgtttctgtagctaccaaagagacagactgcttggagaacgacttacatagctctgca
gacgccctggtggtgccagctccaggggagtcggtgcacatgtgcagcagtatgaaggtc
caggtagaacacccaggtctggatccccaggcagatggatacacaaagccagtcactgtg
atgttagaggcctccttcgctgcatgcacccctcagctgaatcacagtaggcttgatgtg
cagctgtccaataattccaactatctgctgctgctttgggacctcccgatgagcctacga
ggtcggttctactactgtcgccacttcagagggaggaaacaggcccggagggttggggaa
cttcccgaggtcactgaactggtgtcaggcccggattggaatccaaacacatcccagccc
atgcccggctctacagcgccggcccccagcgtcttcccgggtgccagcggcacccgcatc
cattcaaatgctgcccattccccgctcctcagtcgcttcccgctactccgcacgcgcatc
tcccccacccgtcagggtcaggcctctcggtga