GENSCAN 1.0	Date run:  6-Nov-116	Time: 19:16:01

Sequence gi568815597f:74633245_74864110 : 230866 bp : 37.19% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.06 Intr -   3194   3099   96  2  0   45   88    73 0.148   2.29
 1.05 Intr -   8215   8087  129  1  0   64  105    91 0.889   8.37
 1.04 Intr -   9854   9783   72  2  0   62  116    50 0.930   3.88
 1.03 Intr -  13548  13423  126  0  0   48   83    83 0.902   3.76
 1.02 Intr -  16071  15978   94  2  1   93  119    14 0.960   4.05
 1.01 Init -  21534  21422  113  0  2   71   74    63 0.387   2.93
 1.00 Prom -  24258  24219   40                              -6.25

 2.04 PlyA -  24275  24270    6                               1.05
 2.03 Term -  25030  24930  101  2  2   38   42   138 0.781   1.51
 2.02 Intr -  25613  25514  100  2  1   94   98    51 0.936   5.46
 2.01 Init -  26006  25944   63  2  0   97   89   -12 0.882   1.00
 2.00 Prom -  29598  29559   40                              -5.25

 3.00 Prom +  36226  36265   40                              -6.05
 3.01 Init +  38391  38434   44  2  2   74   63    30 0.642  -0.96
 3.02 Intr +  40178  40320  143  2  2  140   65    88 0.453  10.78
 3.03 Term +  40485  40609  125  1  2   90   44    89 0.618   2.27
 3.04 PlyA +  41788  41793    6                               1.05

 4.10 PlyA -  41885  41880    6                               1.05
 4.09 Term -  69425  69205  221  0  2   22   42   212 0.670   6.22
 4.08 Intr -  73213  73090  124  1  1   50   27   144 0.562   3.74
 4.07 Intr -  73750  73655   96  1  0   55   97    68 0.886   3.69
 4.06 Intr -  73960  73859  102  1  0   49   92    64 0.831   2.35
 4.05 Intr -  77003  76854  150  2  0  106   93   104 0.999  12.14
 4.04 Intr -  81386  81335   52  1  1   99   83    65 0.998   5.09
 4.03 Intr -  86128  85965  164  1  2   97   90   223 0.993  21.25
 4.02 Intr -  90026  89874  153  2  0   63   67   134 0.989   8.15
 4.01 Init -  91577  91467  111  2  0  108   75    98 0.965  10.76
 4.00 Prom -  92055  92016   40                              -8.95

 5.00 Prom +  92180  92219   40                              -6.05
 5.01 Init +  95908  95952   45  0  0   90   59    93 0.311   7.33
 5.02 Term +  99859 100080  222  0  0   85   49   166 0.701   8.33
 5.03 PlyA + 100927 100932    6                               1.05

 6.00 Prom + 101042 101081   40                             -14.16
 6.01 Init + 101152 101202   51  0  0   63   98    74 0.675   7.11
 6.02 Intr + 103298 103378   81  1  0   80  103    34 0.661   3.02
 6.03 Intr + 105446 105544   99  1  0   63   58   110 0.577   4.89
 6.04 Intr + 106814 106862   49  1  1   52   73    78 0.335   0.03
 6.05 Intr + 106913 107098  186  0  0   35   79   147 0.285   7.24
 6.06 Term + 107347 107804  458  2  2    8   41   228 0.244   4.40
 6.07 PlyA + 107949 107954    6                              -1.95

 7.07 PlyA - 108000 107995    6                              -4.04
 7.06 Term - 108280 108003  278  2  2   84   42   269 0.274  16.54
 7.05 Intr - 109386 109007  380  2  2  -38   48   252 0.212   2.28
 7.04 Intr - 109873 109596  278  1  2   54   68   140 0.246   3.99
 7.03 Intr - 110850 110707  144  0  0  103   83    53 0.372   5.86
 7.02 Intr - 111033 111029    5  1  2   87   94     0 0.392  -7.57
 7.01 Init - 111490 111331  160  1  1   84   89   125 0.780  12.23
 7.00 Prom - 122527 122488   40                              -2.25

 8.00 Prom + 122744 122783   40                              -5.45
 8.01 Init + 122989 123332  344  0  2   60   47   286 0.846  18.45
 8.02 Term + 123570 124233  664  0  1   79   38   303 0.884  16.75
 8.03 PlyA + 125799 125804    6                               1.05

 9.00 Prom + 130002 130041   40                              -1.95
 9.01 Sngl + 130690 130869  180  0  0   80   43   201 0.702   9.55
 9.02 PlyA + 131136 131141    6                               1.05

10.00 Prom + 132903 132942   40                              -5.85
10.01 Init + 133022 133188  167  1  2   18   -1   245 0.089   7.75
10.02 Intr + 149383 149474   92  1  2   69   58    64 0.036   0.22
10.03 Intr + 159354 159393   40  1  1  113   86    33 0.186   1.96
10.04 Intr + 160315 160429  115  1  1   59   38   113 0.090   2.93
10.05 Intr + 211504 211620  117  0  0   91   92    45 0.300   4.94
10.06 Term + 220512 220610   99  2  0   98   48    15 0.005  -4.35
10.07 PlyA + 220615 220620    6                               1.05

11.03 PlyA - 221079 221074    6                               1.05
11.02 Term - 222599 222527   73  1  1  105   34    96 0.479   2.30
11.01 Init - 227064 226904  161  0  2   98   68    42 0.330   2.55

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl + 133022 133192  171  1  0   18   44   248 0.820   7.98


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597f:74633245_74864110|GENSCAN_predicted_peptide_1|210_aa
MGMIISSIMDCMSVSPQNSYVETLIPNVIVFGDEAFGRLLAAYNSLMDKHLAGYFNNTRI
RRHLLRSGLITRSGRILSEKEYKLNMMKRDHQKYIRECLAQAIFHKVLDMERYHQLEIKK
KLETLARKERIQRFKGEHTRRSVENNMPILSPHPPVGPKSNRGHSVLVDEGHSSPLALTA
PRPYTAPGNMQPPIRLQPLPSNPAVETVPK

>gi568815597f:74633245_74864110|GENSCAN_predicted_CDS_1|630_bp
atggggatgatcatatcttctattatggactgcatgtctgtgtctccccaaaattcatat
gttgaaaccctaatccccaatgtgatagtatttggagatgaggcctttgggaggttactt
gctgcatataatagccttatggataaacacctggctgggtattttaacaatacaaggata
aggcgtcatctcttaagatcaggactgatcacaagaagtggaagaatactttctgaaaaa
gaatataaactaaatatgatgaagcgggatcatcaaaaatatatccgggaatgcttagcc
caggcaatttttcataaagttcttgatatggagcgttaccatcagcttgaaataaaaaag
aaattggagaccttagctaggaaggagcgaatccagaggtttaagggagagcacacaaga
aggtctgttgaaaataacatgccaatcctgtctccccacccaccagttggcccaaagagt
aatcgtggccatagtgttctggttgatgaaggacattccagtccgttagcactgacagcc
cctcgaccatatactgctccaggaaatatgcagcctccaattcgattacagcctcttccc
agtaatcctgcagtagaaactgttccaaag

>gi568815597f:74633245_74864110|GENSCAN_predicted_peptide_2|87_aa
MVLSYPWTFACGNPSSWSNPLMRKLSLIVSKQLVGTHRVQVSIEDLKLGISEGGAKMGKE
DKELGSGGEKEEQKEEEYLIENIQFYG

>gi568815597f:74633245_74864110|GENSCAN_predicted_CDS_2|264_bp
atggtactctcttatccctggacctttgcatgtggtaatccctcttcctggagcaatcct
cttatgaggaaattgagcttaatagtgagtaaacaacttgttggaactcatagagtacaa
gtgtcaatagaagatttaaaactgggtatttcagagggtggggctaagatgggaaaggag
gacaaggaattgggaagtggaggggaaaaggaagagcagaaggaggaggaatacctcata
gagaacattcagttttatggttaa

>gi568815597f:74633245_74864110|GENSCAN_predicted_peptide_3|103_aa
MRVTKNQHEWEDLISRREEEGQLAEAATCHSVEKLQLSLTQRGENGSFLQDPFWTPRQVR
RVASLLLREERGKRPGSGEAEALLEPSLRKLEVKPASTPFSGP

>gi568815597f:74633245_74864110|GENSCAN_predicted_CDS_3|312_bp
atgagggtaactaaaaaccagcatgagtgggaagatttaataagcaggagggaggaggag
gggcagctggctgaagccgccacctgccacagcgtggaaaagctccagttgtcacttacc
cagcggggtgagaatggctcatttttgcaggatcccttttggaccccgcggcaggtgcgg
agggtggcttccctgttgctaagggaggagagaggcaagcgcccagggtctggagaagcg
gaggcgctactggaaccgagcctgcggaagctggaagtgaagccagcttctacccctttt
tctgggccctga

>gi568815597f:74633245_74864110|GENSCAN_predicted_peptide_4|390_aa
MATGQKLMRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYS
RKPLLPYTPGSDVAGVIEAVGDNASAFKKGDRVFTSSTISGGYAEYALAADHTVYKLPEK
LDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTA
GTEEGQKIVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEMLANVNLSKDLSLLSHG
GRVIVVGSRGTIEINPRDTMAKESSIIGVTLFSSTKEEFQQYAAALQAGMEIGWLKPVIG
SQYPLEKVAEAHENIIHAKPDNVKIGAEDARTLVQQALELTQNIEEAISLQILIWKKLTS
LMGREEGHKYISGIVVKSMGSEGKETGFKA

>gi568815597f:74633245_74864110|GENSCAN_predicted_CDS_4|1173_bp
atggcgactggacagaagttgatgagagctgttagagtttttgaatttggtgggccagaa
gtcctgaaattgcgatcagatattgcagtaccgattccaaaagaccatcaggttctaatc
aaggtccatgcatgtggtgtcaaccccgtggagacatacattcgctctggtacttatagt
agaaaaccactcttaccctatactcctggctcagatgtggctggggtgatagaagctgtt
ggagataatgcatctgctttcaagaaaggtgacagagttttcactagcagcacgatctct
gggggttatgcagagtatgctcttgcagcagaccacactgtttacaaactacctgaaaaa
ctggactttaaacaaggagctgccatcggcattccatattttactgcttatcgagctctg
atccacagtgcctgtgtgaaagctggagagagtgttctggttcatggggcaagtggagga
gttggattagcagcatgccaaattgctagagcttatggcttaaagattttgggcactgct
ggtactgaggaaggacaaaagattgttttgcaaaatggagcccatgaagtgttcaatcac
agagaagtgaattacattgataaaattaagaagtatgttggtgagaaaggaattgatata
attattgaaatgttagctaatgtaaatcttagtaaagacttgagtcttctgtcacatgga
ggacgagtgatagttgttggcagcagaggtactattgaaataaacccacgagacaccatg
gcaaaggagtcgagtataattggagttactctcttttcctcaaccaaggaggaatttcag
caatatgcagcagcccttcaagctggaatggaaattggctggttgaaacctgtgataggt
tctcaatatccattggagaaggtggccgaggctcatgaaaatatcattcatgcaaagcca
gataatgtaaaaattggagcagaagatgcccgtaccttagtccagcaggcactggaattg
acgcaaaatattgaagaggctatctcactccagatattgatctggaagaaactgacctct
cttatgggcagggaggaaggccacaagtacatctctggtatagttgtcaagagcatgggt
tctgaaggcaaagaaactggatttaaagcctag

>gi568815597f:74633245_74864110|GENSCAN_predicted_peptide_5|88_aa
MTLRKEQVLEYAARGAKALEFPKLRTKRKFGPFRPPLASIWLPPGRDEATMKEPSADPES
VTHGSQRGVQEMEGAMFEQSGPQPEGQC

>gi568815597f:74633245_74864110|GENSCAN_predicted_CDS_5|267_bp
atgacgttacggaaagagcaggttttggaatatgcagctcgaggtgcgaaggcactagaa
tttcccaaattaagaacgaagaggaagtttggaccttttcggccaccgctcgcttcaata
tggctgcccccagggagagacgaggctaccatgaaggagccgagcgcagaccctgagtcc
gtcacccatggatcgcagcgcggagttcaggaaatggaaggcgcaatgtttgagcaaagc
ggacctcagccggaagggcagtgttga

>gi568815597f:74633245_74864110|GENSCAN_predicted_peptide_6|307_aa
MAPKYGSNDAGDLDLPTGINGFEVQKQNCCWLLVTHKLCVKDDVIVALKKANGDATLKFE
PFVLHVQCRQLQDAQILWVIGLADFKNEAVDPRNVQMCPEFLPSSGFVVLLTSGVKLQTF
AVSVTALKGGMSRVVCSSQWVRGLADFRNEAADFHTRHRALIGAFLQSADWCVYNPLARH
RALIGAFLQSADWCVYNPLARHRALIGAFLQSADWCIYSPLATHRALIGAFLQSADWCIC
SPLARQKSSPSPHLTQKVQLASSLNPPSKQDTSTAAGNLAMTALATSCWIGVKKGPCSCS
VLQRGTL

>gi568815597f:74633245_74864110|GENSCAN_predicted_CDS_6|924_bp
atggccccaaagtacgggagtaatgatgctggcgatttggatctgccaacaggtataaat
ggttttgaggttcagaaacaaaactgttgctggctactggttacacacaaactttgtgta
aaagatgatgtgattgtagctctgaagaaagcaaatggtgatgccactttgaaatttgaa
ccatttgttcttcatgtgcagtgtcgacaattgcaggatgcacagattctgtgggttatt
ggtctcgctgacttcaagaatgaagccgtggaccctcgcaatgttcagatgtgtccggag
tttcttccttccagtgggttcgtggtcttgctgacttcaggagtgaagctgcagaccttc
gcagtgagtgttacagctcttaaaggtggcatgtccagagttgtttgttcctcccagtgg
gttcgtggtcttgctgatttcagaaatgaagccgcagacttccacactagacatagagcg
ctgattggtgcgtttttacagagtgctgattggtgcgtttacaatcctttagctagacac
agagcgctgattggtgcatttttacagagtgctgattggtgcgtttacaatcctttagct
agacacagagcgctgattggtgcatttttacagagtgctgattggtgcatttacagtcct
ttagctacacacagagcgctaattggtgcgtttttacagagtgctgattggtgcatttgc
agtcctctagctagacagaaaagttctccaagtccccacttgacccagaaagtccagctg
gcttcatctctcaatccaccctctaaacaggacacctcaactgctgctgggaatttggcg
atgacggctctagctacttcctgctggataggggtgaagaaggggccctgcagttgtagt
gtcctccagaggggaactctttag

>gi568815597f:74633245_74864110|GENSCAN_predicted_peptide_7|414_aa
MSVCNFILEVSETKNPSEGTNSRHILATQMGHIWRPRWDTFWRPRWDNRLLPSGKKETSK
EISKGPQKRLGYQLCPLQAVAGGEFGPTWVHVSFSLSDLKQIKGNHWKVHCPREQTFSEP
EAPNQLTQQQDSGCRGQVPAHVITLTEPWACLTIEGQEIDFLLDTGVAFSVLISCLRELS
SRSVTIQGILGQPVTSHRKGEGEKAEGNRWADAEAKIAARQNIPLEIPTEGPLVWNNPLQ
EVKLQYSPTETEWGLSRGHSFLPSAWLTTEEGKVLIPKASQWKILKTLHETVHMGIENTH
QMAKSLFTGPNLLQAIRQVVKAYSLWEGPYSVILSTPTAVKMAGVESWIHHTPVKFWTPP
EEPAGPSAQESQDQPDQPRYTCEPLEDLHLLFWKETSQTKKALTSDPEEKPIPP

>gi568815597f:74633245_74864110|GENSCAN_predicted_CDS_7|1245_bp
atgagtgtctgcaacttcattcttgaagtcagtgagaccaagaacccatcggaaggaacc
aattctagacacattttggcaacccagatgggacacatttggcgacccagatgggacaca
ttttggcgacccagatgggacaatcgcctattgccaagtgggaagaaggaaacaagcaaa
gaaatctccaaaggaccacaaaaacgcctgggctatcagttatgtccccttcaagctgta
gcgggaggggaatttggcccaacttgggtacatgtctccttctccctctctgatttaaag
cagatcaagggcaatcactggaaggtgcactgccccagagaacaaacgttctctgagcca
gaagcccccaaccagctgacccaacaacaggactcagggtgccgggggcaagtgccagct
catgtcatcaccctcactgagccctgggcatgtttaaccattgagggccaggaaattgac
ttcctcctggacactggtgtggctttctcagtgttaatctcctgtctcagggagttgtcc
tcaaggtccgttaccatccaaggaatcctgggacagcctgtaaccagccatcggaaaggt
gaaggagaaaaggcagaaggaaaccgttgggcagatgctgaggctaaaattgctgccagg
cagaacatcccattagaaatacctacggaaggacccttggtatggaacaaccccctccaa
gaggttaagctccagtattccccaaccgaaacagagtggggactttcacgggggcatagt
tttctcccctcggcgtggttaacgacagaagaaggaaaggtacttatacccaaagccagc
cagtggaaaatacttaaaaccctccacgaaactgttcacatgggtattgaaaacacgcat
caaatggccaaatccctatttacagggccaaatctcctccaggccatccgacaggtagtc
aaagcctattctttgtgggaaggaccatactcggtaatcctctctacccccactgcagtt
aagatggcaggagtggaatcttggattcaccacaccccagttaaattttggacacccccg
gaggaacctgcgggaccatcagctcaggagtcccaagatcagccagaccagcctcgatac
acctgcgaaccattggaggacttgcatctcctattttggaaggaaacatcccagactaaa
aaggctcttacctctgatcctgaggaaaaacccattcctccttaa

>gi568815597f:74633245_74864110|GENSCAN_predicted_peptide_8|335_aa
MWKRLWNWVTGRGWNSLEDSEEDRKMWESLELPRDLSNGFDQNADNDMDKEIQADVVSDG
DEELVGNWSKGDSCYVLAKRLAAFYPCPRDLWNFDVERDDLGYPAEFLSSKAFKRPRGLG
GKSGFVGWAQGPCAVCSLGTWCPVSQPLKPWLKGTNVELGAVASEGASPKPWQLPCGVEP
TSGQKSRIGIWGPPSRFQKIYGNTWMPRWKFSAEAGPSWRTSARAVPKGSVGSEPPHRVP
TRAMPSGAVRSGLPSSRPQNDRSTDSLYCVPGKATDTQCQLVKVARREAVSCKATEAELP
KTMGTHLLHQHDLDVRHGVKGDHFGALMFDCPAGF

>gi568815597f:74633245_74864110|GENSCAN_predicted_CDS_8|1008_bp
atgtggaagcgactttggaactgggtaacaggtagaggttggaacagtttggaggattca
gaagaagacaggaaaatgtgggaaagtttggaacttcctagagacttgtctaatggcttt
gaccaaaatgctgataatgatatggacaaggaaatccaggctgatgtagtctcagatgga
gatgaggaacttgttgggaactggagcaaaggtgactcttgttatgttttagcaaagaga
ctggcagcattttacccctgccctcgagacttgtggaactttgatgttgagagagatgat
ttagggtatccggcagaatttctaagcagcaaagcattcaagaggcccagaggcctagga
ggaaaaagtggttttgtgggctgggcccaaggtccctgtgctgtgtgcagcctaggaact
tggtgccctgtgtcccagccactcaagccatggctgaaagggaccaatgtagagcttggg
gctgtggcttcagagggtgcaagccccaaaccttggcagcttccatgtggtgttgagcct
acgagtggacaaaagtcaagaattggcatctggggacctccatctagatttcagaagata
tatggcaacacctggatgcccagatggaagtttagtgcagaggcggggccctcatggaga
acctctgctagggcagtgccaaagggaagtgtggggtcagagcccccacacagagtccct
actcgggcaatgcctagtggagctgtgagaagcgggctaccatcctccagaccccagaat
gatagatccaccgacagcttgtactgtgtacctggaaaagccacagacactcagtgccag
cttgtgaaggtagccagaagggaagctgtatcctgcaaagccacagaggcagagctgccc
aagactatgggaacccacctcttgcatcagcatgatctggatgtgagacatggagtcaaa
ggagatcattttggagctttaatgtttgactgccctgctggattttag

>gi568815597f:74633245_74864110|GENSCAN_predicted_peptide_9|59_aa
MTNLHPKIKEKNNSSYIHKKKRNPEKTRAQCITKESDEELENDDDDDLGINVTIFPEDY

>gi568815597f:74633245_74864110|GENSCAN_predicted_CDS_9|180_bp
atgactaacttacatcccaagatcaaagagaaaaataactcatcatatattcataagaaa
aaaagaaacccagaaaaaacacgtgcccagtgtattactaaagaaagtgatgaagaactt
gaaaatgatgatgatgatgatctaggaatcaatgttaccatcttccctgaagattactaa

>gi568815597f:74633245_74864110|GENSCAN_predicted_peptide_10|209_aa
MLTVKQLLTGPSGSTPEEGIVIIEGDSFMCVIAPEDLPVVQDVEEEDSDTEDSDPVNLKF
PPCPITALPGAGYTQRTEFLSAPNKHGRNVTQKEAIKSRSPIQFTNQLYQGWSWRPPTSY
KWKSAENLSATADRESVRGEASMEPRRCVTQPPLLDNVPGGTLEIPVKFSKPTSRIYSLQ
KSIKITGGDEIRKREMWCCLGQGARHDKR

>gi568815597f:74633245_74864110|GENSCAN_predicted_CDS_10|630_bp
atgttaactgtaaaacagcttctgacaggtccttcaggaagtactccagaagaaggcatt
gttatcatagaaggtgacagcttcatgtgtgttattgcccctgaagaccttccagtggta
caagatgtggaggaggaagacagtgatactgaggattctgaccctgtgaacctgaagttc
cctccatgccctatcactgctctgccaggtgctggctacacccaacgtactgaattcctc
agtgcgccaaataagcatgggagaaatgtcacccaaaaggaagctattaagtcaagaagt
cccatccaattcaccaaccagctctaccagggctggtcctggagaccacccacatcctac
aagtggaaaagtgctgaaaacctgtcagccacagctgacagagagtccgtcaggggtgag
gcttccatggaaccaagaagatgtgtcactcagcctccacttctagataatgttccaggt
gggaccctggaaatccctgtcaaattctctaaacccacttccaggatctattctttacag
aaatcgataaaaatcactggaggtgacgagattaggaaaagagaaatgtggtgttgcctt
ggtcagggagccagacatgacaaaagatga

>gi568815597f:74633245_74864110|GENSCAN_predicted_peptide_11|77_aa
MPLVLSCDTILMRSGCLKVSSHPCEDVPVSPSTSAMIVSFLRPPAMLTAQPVELPAAMDM
VIERANELEARKPGFKI

>gi568815597f:74633245_74864110|GENSCAN_predicted_CDS_11|234_bp
atgcccctagtgctgtcttgtgataccattctcatgagatctggttgtttgaaagtgtcc
tcccacccatgtgaagatgtgcctgtttctccttcaacttcagccatgattgtaagtttc
ctgaggcccccagccatgcttactgcacagcctgtggaattgccagcggccatggatatg
gttattgaaagggcaaatgaactagaagccaggaaacctggattcaagatctga