GENSCAN 1.0	Date run:  7-Nov-116	Time: 22:01:50

Sequence gi568815597f:28136184_28337975 : 201792 bp : 46.54% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.02 PlyA -    177    172    6                               1.05
 1.01 Sngl -  14838  13810 1029  0  0   85   37  1671 0.802 158.80
 1.00 Prom -  20150  20111   40                              -4.96

 2.15 PlyA -  20373  20368    6                               1.05
 2.14 Term -  28281  28111  171  0  0   69   33   110 0.245   1.43
 2.13 Intr -  37940  37914   27  2  0   96   70    41 0.286   1.41
 2.12 Intr -  39418  39285  134  2  2  103   54    23 0.169   0.76
 2.11 Intr -  40685  40583  103  2  1  110   25    72 0.256   2.85
 2.10 Intr -  61551  61466   86  1  2   71   80    86 0.489   5.64
 2.09 Intr -  65187  65073  115  0  1   98   92   171 0.987  18.52
 2.08 Intr -  67639  67564   76  0  1   92   84    82 0.998   7.72
 2.07 Intr -  69166  69075   92  1  2   66   83    50 0.989   1.09
 2.06 Intr -  72230  72159   72  2  0   60  105    57 0.945   4.20
 2.05 Intr -  73883  73789   95  0  2    5   93   137 0.971   5.58
 2.04 Intr -  74454  74388   67  0  1   90   63    52 0.950   1.38
 2.03 Intr -  78813  78757   57  0  0   63   92    44 0.452   1.38
 2.02 Intr -  92840  92739  102  2  0   71   83    20 0.127   0.17
 2.01 Init -  96815  96738   78  2  0   92   51    66 0.268   4.37
 2.00 Prom -  97263  97224   40                              -5.76

 3.00 Prom +  97719  97758   40                             -10.05
 3.01 Init + 100001 100087   87  1  0   87  101   163 0.914  16.29
 3.02 Intr + 100178 100269   92  1  2   93   93   120 0.913  11.79
 3.03 Term + 101654 101795  142  2  1   65   42   183 0.999   8.80
 3.04 PlyA + 101898 101903    6                               1.05

 4.00 Prom + 104654 104693   40                              -9.16
 4.01 Init + 108455 108504   50  1  2   91   95     6 0.401   2.10
 4.02 Intr + 117226 117367  142  1  1   62   73    53 0.499   1.56
 4.03 Intr + 123301 123552  252  0  0   25  -30   316 0.944  11.13
 4.04 Intr + 123560 123754  195  1  0    1   99   281 0.835  20.11
 4.05 Intr + 131675 131899  225  1  0  116   75    81 0.865   7.78
 4.06 Intr + 133000 133065   66  0  0   94   99    76 0.992   8.40
 4.07 Intr + 135491 135688  198  1  0   92   89   248 0.988  24.85
 4.08 Intr + 136101 136283  183  2  0   83   61   266 0.789  23.38
 4.09 Intr + 136398 136610  213  2  0  149   98   225 0.999  28.51
 4.10 Intr + 137175 137325  151  2  1   47   92   344 0.999  30.44
 4.11 Intr + 137857 137975  119  2  2  110   91   133 0.996  15.98
 4.12 Intr + 138642 138832  191  2  2   68   99   316 0.968  29.08
 4.13 Intr + 142842 143058  217  0  1  119   86   188 0.726  20.21
 4.14 Term + 144533 144619   87  1  0  109   41   180 0.999  13.06
 4.15 PlyA + 146279 146284    6                               1.05

 5.00 Prom + 189013 189052   40                              -3.16
 5.01 Init + 192759 192812   54  2  0   79   68    54 0.778   3.80
 5.02 Intr + 194414 194552  139  1  1   69  110   137 0.788  14.04
 5.03 Term + 198234 198787  554  1  2  122   42   553 0.994  48.58
 5.04 PlyA + 199647 199652    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597f:28136184_28337975|GENSCAN_predicted_peptide_1|342_aa
MEPHDSSHMDSEFRYTLFPIVYSIIFVLGVIANGYVLWVFARLYPCKKFNEIKIFMVNLT
MADMLFLITLPLWIVYYQNQGNWILPKFLCNVAGCLFFINTYCSVAFLGVITYNRFQAVT
RPIKTAQANTRKRGISLSLVIWVAIVGAASYFLILDSTNTVPDSAGSGNVTRCFEHYEKG
SVPVLIIHIFIVFSFFLVFLIILFCNLVIIRTLLMQPVQQQRNAEVKRRALWMVCTVLAV
FIICFVPHHVVQLPWTLAELGFQDSKFHQAINDAHQVTLCLLSTNCVLDPVIYCFLTKKF
RKHLTEKFYSMRSSRKCSRATTDTVTEVVVPFNQIPGNSLKN

>gi568815597f:28136184_28337975|GENSCAN_predicted_CDS_1|1029_bp
atggagccacatgactcctcccacatggactctgagttccgatacactctcttcccgatt
gtttacagcatcatctttgtgctcggggtcattgctaatggctacgtgctgtgggtcttt
gcccgcctgtacccttgcaagaaattcaatgagataaagatcttcatggtgaacctcacc
atggcggacatgctcttcttgatcaccctgccactttggattgtctactaccaaaaccag
ggcaactggatactccccaaattcctgtgcaacgtggctggctgccttttcttcatcaac
acctactgctctgtggccttcctgggcgtcatcacttataaccgcttccaggcagtaact
cggcccatcaagactgctcaggccaacacccgcaagcgtggcatctctttgtccttggtc
atctgggtggccattgtgggagctgcatcctacttcctcatcctggactccaccaacaca
gtgcccgacagtgctggctcaggcaacgtcactcgctgctttgagcattacgagaagggc
agcgtgccagtcctcatcatccacatcttcatcgtgttcagcttcttcctggtcttcctc
atcatcctcttctgcaacctggtcatcatccgtaccttgctcatgcagccggtgcagcag
cagcgcaacgctgaagtcaagcgccgggcgctgtggatggtgtgcacggtcttggcggtg
ttcatcatctgcttcgtgccccaccacgtggtgcagctgccctggacccttgctgagctg
ggcttccaggacagcaaattccaccaggccattaatgatgcacatcaggtcaccctctgc
ctccttagcaccaactgtgtcttagaccctgttatctactgtttcctcaccaagaagttc
cgcaagcacctcaccgaaaagttctacagcatgcgcagtagccggaaatgctcccgggcc
accacggatacggtcactgaagtggttgtgccattcaaccagatccctggcaattccctc
aaaaattag

>gi568815597f:28136184_28337975|GENSCAN_predicted_peptide_2|424_aa
MAASGESGTSGGGGSTEEAFMTFYSEVKQIEKRDSVLTSKNQIERLTRPGSSYFNLNPFE
VLQIDPEVTDEEIKKRFRQLSILVHPDKNQDDADRAQKAFEAVDKAYKLLLDQEQKKRAL
DVIQAGKEYVEHTVKERKKQLKKEGKPTIVEEDDPELFKQAVYKQTMKLFAELEIKRKER
EAKEMHERKRQREEEIEAQEKAKREREWQKNFEESRDGRVDSWRNFQANTKGKKEKKNRT
FLRPPKVKMEQLEQIGSPAVEPTAGKRTFVGRGEVEGASQLLASGAVYTPPHPSLFEKPL
CSAQVLAAQLGSSCGGPDMGLCTHSLVKYDRTSRLSPHTSGCSPLALTEYPAVFQVFGVH
DESGEKPLSKEYLDPRECAHLECGVPPPSPLLVLALLVNAPSGLRGCKELLVQELWMNLD
VSYL

>gi568815597f:28136184_28337975|GENSCAN_predicted_CDS_2|1275_bp
atggcggcttcaggagagagcgggacttcaggcggcggaggcagcaccgaggaagcattt
atgaccttctacagtgaggtgaaacaaatagagaagagagactcggttctaacttcgaaa
aatcagattgaaagactgacccgtcctggttcctcttacttcaatttgaacccatttgag
gttcttcagatagatcctgaagttacagatgaagaaataaaaaagaggtttcggcagtta
tccatcttggtgcatcctgacaaaaatcaagatgatgctgacagagcacaaaaggctttt
gaagctgtggacaaagcttacaagttgctactggatcaggagcaaaagaagagggccctg
gatgtaattcaggcaggaaaagaatacgtggaacacactgtgaaagagcgaaaaaaacaa
ttaaagaaggaaggaaaacctacaattgtagaggaggatgatcctgagctgttcaaacaa
gctgtatataaacagacaatgaaactctttgcagagctggaaattaaaaggaaagagaga
gaagccaaagagatgcatgaaaggaaacgacaaagggaagaagagattgaagctcaagaa
aaagccaaacgggaaagagagtggcagaaaaactttgaggaaagtcgagatggtcgtgtg
gacagctggcgaaacttccaagccaatacgaaggggaagaaagagaagaaaaatcggacc
ttcctgagaccaccgaaagtaaaaatggagcaactggagcagataggctccccagctgtg
gagccaactgctggcaagaggacctttgtgggcagaggtgaggtggaaggagccagccag
ctcctggcctcgggcgctgtctacaccccaccccatccctcgctctttgagaagcctctg
tgcagtgcccaggtcctggcggcccagcttggaagttcctgtggaggtccagacatgggg
ctgtgcactcactcacttgtgaaatatgacagaaccagcaggctctctccccacacctct
ggctgctctcctttagctctgactgaatacccagctgtgttccaggtgtttggggtgcat
gatgagagcggggagaagcctctgagcaaggagtacttggatccaagagagtgtgcccac
ttggaatgtggtgttcccccgccttcaccacttctagtccttgccctgttggtgaatgca
ccctcaggcctgcggggctgcaaggaactgctggtgcaggagctgtggatgaacttggat
gtatcttatttatag

>gi568815597f:28136184_28337975|GENSCAN_predicted_peptide_3|106_aa
MAVTALAARTWLGVWGVRTMQARGFGSDQSENVDRGAGSIREAGGAFGKREQAEEERYFR
AQSREQLAALKKHHEEEIVHHKKEIERLQKEIERHKQKIKMLKHDD

>gi568815597f:28136184_28337975|GENSCAN_predicted_CDS_3|321_bp
atggcagtgacggcgttggcggcgcggacgtggcttggcgtgtggggcgtgaggaccatg
caagcccgaggcttcggctcggatcagtccgagaatgtcgaccggggcgcgggctccatc
cgggaagccggtggggccttcggaaagagagagcaggctgaagaggaacgatatttccga
gcacagagtagagaacaactggcagctttgaaaaaacaccatgaagaagaaatcgttcat
cataagaaggagattgagcgtctgcagaaagaaattgagcgccataagcagaagatcaaa
atgctaaaacatgatgattaa

>gi568815597f:28136184_28337975|GENSCAN_predicted_peptide_4|762_aa
MTLSNSFELKLLQGPGRKAERREEAAVEKLKPSIVCFMRLKERSLLNNRKIQGEAAHADG
EAAARAELLVSEPGERWQFRGGDAEERWVREQPWPLRTSEAVKTPALRPFPGPRGRSPFP
KPDWGKSPAPKRPFSDSGAFWSPERRPGKLPGGAQSRLHSGVPPKPTRVHGSSASRDRVL
ARTMIVADSECRAELKDYLRFAPGGVGDSGPGETSMNDLALLSTKCDLVSGKQNRQFDDS
VFRSKSPGNFGVIGEGQKKVPRLLWFSFAKGVTTGTGPVVSGSPWEGEEQRESRARRGPR
GPSAFIPVEEVLREGAESLEQHLGLEALMSSGRVDNLAVVMGLHPDYFTSFWRLHYLLLH
TDGPLASSWRHYIAIMAAARHQCSYLVGSHMAEFLQTGGDPEWLLGLHRAPEKLRKLSEI
NKLLAHRPWLITKEHIQALLKTGEHTWSLAELIQALVLLTHCHSLSSFVFGCGILPEGDA
DGSPAPQAPTPPSEQSSPPSRDPLNNSGGFESARDVEALMERMQQLQESLLRDEGTSQEE
MESRFELEKSESLLVTPSADILEPSPHPDMLCFVEDPTFGYEDFTRRGAQAPPTFRAQDY
TWEDHGYSLIQRLYPEGGQLLDEKFQAAYSLTYNTIAMHSGVDTSVLRRAIWNYIHCVFG
IRVGLRGGSCLWEESMSNAAGTFPSRYDDYDYGEVNQLLERNLKVYIKTVACYPEKTTRR
MYNLFWRHFRHSEKVHVNLLLLEARMQAALLYALRAITRYMT

>gi568815597f:28136184_28337975|GENSCAN_predicted_CDS_4|2289_bp
atgaccctgtccaacagttttgaactcaagttgctacaggggccaggcaggaaagctgag
agacgtgaggaagctgctgtagaaaagcttaaacctagcatagtttgcttcatgaggttg
aaagaaagaagccttctcaataacagaaaaatacaaggtgaagcagcccatgctgatgga
gaagctgctgcacgggctgaactgctggtgtcagagcccggcgagcgctggcagttccgc
ggcggggatgctgaggagcgctgggtccgggagcagccctggcccctgcggacttccgag
gccgtgaaaacccctgcgctgcggcccttcccaggcccccgaggccgttcgccgttcccg
aagcccgactgggggaagagtccagcaccaaagcggccgttctcggattccggagcgttc
tggagccccgagagacgccccgggaagctccccggcggcgcccagtcccggcttcattcg
ggcgtccctccgaaacccactcgggtgcacgggtcgtcggcgagccgcgaccgggtcctg
gcgcgcaccatgatcgtggcggactccgagtgccgcgcagagctcaaggactacctgcgg
ttcgccccgggcggcgtcggcgactcgggccccggagagactagtatgaatgacctggcg
ctgctctccactaaatgtgatctggtgtcagggaaacaaaacagacaatttgatgacagt
gtttttagaagcaaaagccctgggaattttggggtcataggtgagggccagaaaaaggtt
cctagactattgtggtttagctttgcaaaaggagtgaccactgggactgggccagttgta
tctggaagcccatgggagggggaggagcagagggagagccgggctcggcgaggccctcga
gggcccagcgccttcatccccgtggaggaggtccttcgggagggggctgagagcctcgag
cagcacctggggctggaggcactgatgtcctctgggcgagtagacaacctggcagtggtg
atgggcctgcaccctgactactttaccagcttctggcgcctgcactacctgctgctgcac
acggatggtcccttggccagctcctggcgccactacattgccatcatggctgccgcccgc
catcagtgttcttacctggtaggctcccacatggccgagtttctgcagactggtggtgac
cctgagtggctgctgggcctccaccgggcccccgagaagctgcgcaaactcagcgagatc
aacaagttgctggcgcatcggccatggctcatcaccaaggaacacatccaggccttgctg
aagaccggcgagcacacttggtccctggccgagctcattcaggctctggtcctgctcacc
cactgccactcgctctcctccttcgtgtttggctgtggcatcctccctgagggggatgca
gatggcagccctgccccccaggcacctacaccccctagtgaacagagcagccccccaagc
agggacccgttgaacaactctgggggctttgagtctgcccgcgacgtggaggcgctgatg
gagcgcatgcagcagctgcaggagagcctgctgcgggatgaggggacgtcccaggaggag
atggagagccgctttgagctggagaagtcagagagcctgctggtgaccccctcagctgac
atcctggagccctctccacacccagacatgctgtgctttgtggaagaccctactttcgga
tatgaggacttcactcggagaggggctcaggcaccccctaccttccgggcccaggattat
acctgggaagaccatggctactcgctgatccagcggctttaccctgagggtgggcagctg
ctggatgagaagttccaggcagcctatagcctcacctacaataccatcgccatgcacagt
ggtgtggacacctccgtgctccgcagggccatctggaactatatccactgcgtctttggc
atcagggtggggttgcggggagggagctgcctttgggaagaaagcatgagtaatgctgct
gggacctttccatccagatatgatgactatgattatggggaggtgaaccagctcctggag
cggaacctcaaggtctatatcaagacagtggcctgctacccagagaagaccacccgaaga
atgtacaacctcttctggaggcacttccgccactcagagaaggtccacgtgaacttgctg
ctcctggaggcgcgcatgcaagccgctctgctgtacgccctccgtgccatcacccgctac
atgacctga

>gi568815597f:28136184_28337975|GENSCAN_predicted_peptide_5|248_aa
MKLFGLLGTHTFGNGSFEVYPVPYLTGGSESSCVVFNLDTMEAPPVTMMPVTGGTINMME
YLLQGSVLDHSLESLIHRLRGLCDNMEPETFLDHEMVFLLKGQQASPFVLRARRSMDRAG
APWHLRYLGQPEMGDKNRHALVRNCVDIATSENLTDFLMEMGFRMDHEFVAKGHLFRKGI
MKIMVYKIFRILVPGNTDSTEALSLSYLVELSVVAPAGQDMVSDDMKNFAEQLKPLVHLE
KIDPKRLM

>gi568815597f:28136184_28337975|GENSCAN_predicted_CDS_5|747_bp
atgaagctcttcggccttctcggcacccatacgtttgggaacggcagtttcgaggtatat
cccgtgccttacctgactgggggctctgagtccagttgtgttgtcttcaacttagacacc
atggaggcacctccagtcaccatgatgcctgtcactgggggcaccattaacatgatggag
tacctgttgcagggaagtgttttagatcacagtttggaaagcctcatccaccgccttcgt
ggtttgtgtgacaacatggaacctgagactttccttgaccatgagatggtattcctcctt
aagggccagcaagccagcccatttgttctcagggcccgacgctctatggacagggcaggg
gcaccctggcatctgcgctacctgggacagccagaaatgggagacaagaaccgccatgcc
ctggtgcgaaactgcgtggacattgccacatctgagaacctcaccgacttcttgatggaa
atgggcttccgcatggaccatgagtttgttgctaagggacatttgttccgtaagggcatc
atgaagattatggtgtacaagattttccgcatcctggtgccagggaacacagacagcact
gaggccttgtcactctcctatctcgtggaattaagtgtggtagcacccgctgggcaggac
atggtctctgatgacatgaagaacttcgcagaacagctaaaacctctggttcacctagag
aaaatagaccccaagaggctcatgtga