GENSCAN 1.0	Date run:  7-Nov-116	Time: 22:35:19

Sequence gi568815597f:24414373_24635274 : 220902 bp : 45.22% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +    906   1008  103  1  1   57   77    71 0.176   2.13
 1.02 Intr +   1653   1744   92  0  2   57   59    86 0.336   2.24
 1.03 Intr +   1770   1927  158  1  2   27   81    90 0.116   1.93
 1.04 Intr +  21968  22057   90  1  0   83  -17   110 0.248   0.19
 1.05 Intr +  23788  23883   96  0  0   31  100    43 0.233   0.01
 1.06 Intr +  25800  25868   69  2  0   87  111    77 0.963   9.28
 1.07 Intr +  27683  27854  172  1  1   43   82   232 0.997  17.62
 1.08 Intr +  30813  30872   60  1  0   93   80    45 0.662   2.91
 1.09 Intr +  35109  35227  119  1  2  122   54   147 0.648  14.88
 1.10 Intr +  39036  39132   97  2  1  122  111   125 0.999  17.78
 1.11 Intr +  41766  41901  136  1  1  116   66   170 0.996  17.23
 1.12 Intr +  44516  44604   89  2  2   64  110   120 0.993  11.41
 1.13 Intr +  46109  46172   64  0  1   73   84   109 0.995   6.78
 1.14 Intr +  49654  49748   95  1  2  123  110   109 0.994  16.21
 1.15 Term +  54614  54813  200  0  2   28   53   197 0.769   7.76
 1.16 PlyA +  57050  57055    6                               1.05

 2.03 PlyA -  59468  59463    6                               1.05
 2.02 Term -  60320  60220  101  0  2  115   40    63 0.566   2.49
 2.01 Init -  76650  76380  271  0  1   82   53   148 0.185   7.99
 2.00 Prom -  80997  80958   40                              -2.86

 3.03 PlyA -  81777  81772    6                               1.05
 3.02 Term -  82224  82121  104  1  2  100   55    70 0.912   3.34
 3.01 Init -  88154  88001  154  2  1   64   70   148 0.938   8.75
 3.00 Prom -  90237  90198   40                              -5.06

 4.00 Prom +  92189  92228   40                              -4.16
 4.01 Init + 100016 100195  180  1  0   58  102   134 0.681  10.98
 4.02 Intr + 110200 110337  138  0  0   59   12   157 0.878   5.86
 4.03 Intr + 116846 117019  174  1  0   82   80    94 0.993   8.14
 4.04 Intr + 118711 118882  172  0  1   90   90    62 0.991   6.12
 4.05 Term + 120721 120905  185  2  2   88   54   147 0.968   9.01
 4.06 PlyA + 121362 121367    6                               1.05

 5.03 PlyA - 122408 122403    6                               1.05
 5.02 Term - 142382 142150  233  0  2   67   42   123 0.374   2.24
 5.01 Init - 148326 148248   79  0  1   91  109    35 0.336   7.12
 5.00 Prom - 150773 150734   40                              -6.16

 6.00 Prom + 152377 152416   40                              -3.66
 6.01 Init + 168600 168669   70  2  1   34   80   160 0.975  11.01
 6.02 Term + 169777 169868   92  2  2  124   54    31 0.420   1.18
 6.03 PlyA + 174276 174281    6                               1.05

 7.00 Prom + 178244 178283   40                              -5.56
 7.01 Init + 181059 181140   82  2  1   78   61    83 0.802   5.78
 7.02 Intr + 186568 186652   85  2  1  108   96   187 0.585  20.38
 7.03 Intr + 191234 191360  127  2  1  107   49   132 0.734  11.88
 7.04 Intr + 196363 196488  126  0  0  111   24    47 0.378   1.48
 7.05 Term + 206154 206294  141  2  0   69   43   105 0.502   2.03
 7.06 PlyA + 211405 211410    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init -  68656  68599   58  1  1   85  127    13 0.812   6.39


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597f:24414373_24635274|GENSCAN_predicted_peptide_1|546_aa
XVPGGQERRDMFGPKSREGSGERWVFKDVLDLNTCLANLGPVALECSFQFCIEAKRSGGM
GYLTKGSDMELTLPEFLLFVPSGSGFLAAADGGVSRWDEGRRSWSKPASGTEVLSPRVSA
GFFAYKFGMYEAKRIQNTQEAHQYAIPGVSSEPFSSEILSSHRKDVFCLQVALFCLAAHR
ENLIGALLAIFGHLVVSIALNLQKYCHIRLAGSKDPRAYFKTKTWWLGLFLMLLGELGVF
ASYAFAPLSLIVPLSAVSVIASAIIGIIFIKEKWKPKDFLRRYVLSFVGCGLAVVGTYLL
VTFAPNSHEKMTGENVTRHLLVEIILFCLLLYFYKEKNANNIVVILLLVALLGSMTVVTV
KAVAGMLVLSIQGNLQLDYPIFYVMFVCMVATAVYQAAFLSQASQMYDSSLIASVGYILS
TTIAITAGAIFYLDFIGEDVLHICMFALGCLIAFLGVFLITRNRKKPIPFEPYISMDAMP
GMQNMHDKGMTVQPELKASFSYGALENNDNISEIYAPATLPVMQEEHGSRSASGVPYRVL
EHTKKE

>gi568815597f:24414373_24635274|GENSCAN_predicted_CDS_1|1641_bp
ngtgttccaggagggcaggaaaggagagatatgtttggtcccaagtctcgcgagggctct
ggggagcgctgggtcttcaaggacgttttggatttgaatacttgcctcgccaacctgggt
cccgttgccttggaatgttctttccagttttgcatcgaggccaagaggagcgggggcatg
ggctaccttactaaaggaagtgacatggagttaactttgccagaatttctcctcttcgtg
ccgagcggctcgggcttcctggcggcagcagatggtggagttagcaggtgggatgagggg
aggcgttcttggtctaagcccgcttctggaacagaggtgctgtctcctcgagttagtgct
ggcttcttcgcctacaagtttgggatgtatgaggcaaaaagaatacagaatacccaagaa
gctcaccaatatgccattcctggggtctccagcgagccttttagctctgagatcctgtca
tcccacaggaaggacgtgttctgcctgcaggtggctttattctgtcttgctgctcatcgg
gaaaacctgattggcgccctcttggcgatcttcgggcacctcgtggtcagcattgcactt
aacctccagaagtactgccacatccgcctggcaggctccaaggatccccgggcctatttc
aagaccaagacatggtggctgggcctgttcctgatgcttctgggcgagctgggtgtgttc
gcctcctacgccttcgcgccgctgtcactcatcgtgcccctcagcgcagtttctgtgata
gctagtgccatcataggaatcatattcatcaaggaaaagtggaaaccgaaagactttctg
aggcgctacgtcttgtcctttgttggctgcggtttggctgtcgtgggtacctacctgctg
gtgacattcgcacccaacagtcacgagaagatgacaggcgagaatgtcaccaggcacctc
ctggtggagatcattctgttctgcttgctgctctacttctacaaggagaagaacgccaac
aacattgtcgtgattcttctcttggtggcgttacttggctccatgacagtggtgacagtc
aaggccgtggctgggatgcttgtcttgtccattcaagggaacctgcagcttgactacccc
atcttctacgtgatgttcgtgtgcatggtggcaaccgccgtctatcaggctgcgtttttg
agtcaagcctcacagatgtacgactcctctttgattgccagtgtgggctacattctgtcc
acaaccattgctatcacagcaggtgcaatattttacctggacttcatcggggaggacgtg
ctgcacatctgcatgtttgcactggggtgcctcattgcattcttgggcgtcttcttaatc
acgcgtaacaggaagaagcccattccatttgagccctatatttccatggatgccatgcca
ggtatgcagaacatgcacgataaagggatgactgtccagcctgaacttaaagcttctttt
tcctatggggctctggaaaacaatgacaacatttctgagatctacgctcctgccaccctg
ccagtcatgcaagaagagcacggctccagaagtgcctctggggtcccctaccgagtccta
gagcacaccaagaaggaatga

>gi568815597f:24414373_24635274|GENSCAN_predicted_peptide_2|123_aa
MTSGMKPQTLVVLQFLKMVRPEFFPSGGFTVSLTSRVKLQTFTMRLQLIKTARPEFFIPS
GGFVDSLASKVKLQTFVVSVTAHKVTANPNSGTIANVVPRDSANELLSFKSAPSFETGPK
VMS

>gi568815597f:24414373_24635274|GENSCAN_predicted_CDS_2|372_bp
atgacttcaggaatgaagccgcagaccctcgtggtgttacagttcttaaagatggtacga
ccggagttttttccttctggtgggttcacggtctcactgacttcaagagtgaagctgcag
accttcaccatgaggcttcagctcataaaaacagcacgtccagagttcttcattccttca
ggtgggttcgtggactcactggcttcaaaagtgaagctacaaaccttcgtggtgagtgtt
acagctcacaaggtcactgccaacccaaacagtgggaccattgcaaacgtggtccccaga
gactcagctaatgagcttctgtccttcaagtctgcaccttcctttgaaactgggccaaag
gtgatgtcctaa

>gi568815597f:24414373_24635274|GENSCAN_predicted_peptide_3|85_aa
MTNVYSGLVTMYTAPRARRVYLGSPPGNRRPGYYQMLWASRRLIARGEAAAACNVNTMAG
APAAILDQEVALKMEATCWDGESKR

>gi568815597f:24414373_24635274|GENSCAN_predicted_CDS_3|258_bp
atgacgaacgtttactcagggctggttactatgtacactgcgccccgcgcgcggcgagtt
tacctcggttcacctcccggcaaccggcggcccggatattatcagatgctgtgggcttcc
cggcgcctcattgcccgaggagaggcggccgcagcctgcaatgtgaacacgatggctgga
gctccggcagccattctggaccaggaggtagccttgaagatggaagccacatgttgggat
ggtgaatccaaaagatga

>gi568815597f:24414373_24635274|GENSCAN_predicted_peptide_4|282_aa
MKSWNDSQSDLCSTDQEEEEEMIFGENEDDLDEMMDLSDLPTSLFACSVHEAVFEAREQK
SVVIDENQKHFAYPQAEMEALPLILVDLQALDTGEMEFSRSDLQKDERFEALFTIYDDQV
TFQLFKSFRRVRINFSKPEAAARARIELHETDFNGQKLKLYFAQVQMSGEVRDKSYLLPP
QPVKQFLISPPASPPVGWKQSEDAMPVINYDLLCAVSKLGPGEKYELHAGTESTPSVVVH
VCESETEEEEETKNPKQKIAQTRRPDPPTAALNEPQTFDCAL

>gi568815597f:24414373_24635274|GENSCAN_predicted_CDS_4|849_bp
atgaaatcttggaatgatagccagtcagatctgtgtagcactgaccaagaagaggaagaa
gagatgatttttggtgaaaatgaagatgatttggatgagatgatggatttaagtgatctg
cctacctcactttttgcttgcagcgtccatgaagcagtgtttgaggcacgagagcagaag
tcagtggtgattgatgagaaccaaaagcactttgcctacccccaggcagaaatggaggcc
ttgcctttgatattagtggacctgcaggctctggacactggagaaatggaattttctaga
tcagatttacagaaagacgaaagatttgaagcactcttcaccatctatgatgaccaggtt
acttttcagctgtttaaaagctttagaagagtcagaataaatttcagcaaacctgaagcg
gcagcaagagcgcgaatagaactccacgaaacagacttcaatgggcagaagctaaagcta
tattttgcacaggtgcagatgtccggcgaagtgcgggacaagtcctatctcctgccgccc
cagcctgtcaagcagttcctcatctcccctccagcctctcccccggtggggtggaagcag
agcgaagatgcgatgcctgttataaattatgatttactctgtgctgtttccaaattggga
ccaggagagaaatatgaacttcacgcgggaacagagtcgacacccagcgtggtggttcat
gtctgtgaaagtgaaactgaagaggaagaagagacaaaaaaccccaaacagaaaattgcc
cagacgaggcgccccgaccctccgaccgcagcgttgaatgagccccagacctttgattgc
gcgctgtga

>gi568815597f:24414373_24635274|GENSCAN_predicted_peptide_5|103_aa
MAVAANICTKVTGSDCFKTKSRGPEAGYPEDWSRLCILPQERCWMSDPRAPPNVLWMETT
ALGSFSAVGFHLAESQIFRRGLCIGQTHQGAHLTDGADKAPSG

>gi568815597f:24414373_24635274|GENSCAN_predicted_CDS_5|312_bp
atggctgtagctgccaatatctgcaccaaagtgacaggcagtgattgtttcaagacaaag
agcaggggacctgaagcaggatacccagaggactggagccgtctctgcatccttcctcag
gagcgctgctggatgagcgacccccgagcccctccaaacgtgctgtggatggaaactacg
gccctgggctccttctctgccgtgggttttcatctcgctgaatcgcagatcttccggagg
ggcctctgcatagggcagacccatcaaggcgcccatttaacagatggggcggataaggcc
ccaagtgggtaa

>gi568815597f:24414373_24635274|GENSCAN_predicted_peptide_6|53_aa
MAVIVLLVIAIVVIIMVIGCLSTGTAGHLEIYMGAPMEVEDSQELGPWLEPRD

>gi568815597f:24414373_24635274|GENSCAN_predicted_CDS_6|162_bp
atggcagtaattgtgcttttggtcatcgccatcgtcgtcatcatcatggttattggttgt
ttatccacagggacagcgggacacctggagatttacatgggagctcctatggaggtcgag
gactctcaagagttgggtccttggcttgagcccagagactga

>gi568815597f:24414373_24635274|GENSCAN_predicted_peptide_7|186_aa
MTTATPLGDTTFFSLNMTTRGEDFLYKSSGAIVAAVVVVVIIIFTVVLILLKMYNRKMRT
RRELEPKGPKPTAPSAVGPNSNGSQHPATVTFSPVDVQMLLDEAESSKDSTKCCGILEKV
ELSPTVGIQRLCDLVNVNEGIKNKQEPSVDNTGPFKALLDLSAFLDSKPVRKCCLYCYIH
FSSMSF

>gi568815597f:24414373_24635274|GENSCAN_predicted_CDS_7|561_bp
atgaccacagccacccctctgggggataccaccttcttctcactgaacatgaccaccagg
ggagaagacttcctgtataagagttctggagccattgttgctgccgttgtggtggttgtc
atcatcatcttcaccgtggttctgatcctgctgaagatgtacaacaggaaaatgaggacg
aggcgggaactagagcccaagggccccaagccaaccgccccttctgccgtgggcccaaac
agcaacggcagccaacacccagcaactgtgaccttcagtcctgttgacgtccagatgctt
ctagatgaggctgagtcatccaaggactctaccaagtgctgtggaatcttggagaaagta
gagttgtctccaactgtaggtatccagagactttgtgacttggtgaatgttaatgaaggg
attaaaaacaaacaagaaccctccgttgacaacacaggccccttcaaagcactgctcgac
ctctccgctttcctggacagcaaacctgttcgaaagtgctgtctctactgctacatccat
ttctcttccatgtctttctag