GENSCAN 1.0	Date run:  8-Nov-116	Time: 03:15:46

Sequence gi568815597f:24231550_24454485 : 222936 bp : 45.97% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   5028   5288  261  2  0   73   76   156 0.764   9.97
 1.02 Intr +   5369   5482  114  1  0   29   75    80 0.584   1.44
 1.03 Intr +  19345  19446  102  0  0   61   56    94 0.044   3.87
 1.04 Intr +  22976  23080  105  1  0   53   80   106 0.956   6.71
 1.05 Intr +  25362  25412   51  2  0   73  111    10 0.486   0.90
 1.06 Intr +  25871  25972  102  1  0   90   62    33 0.494   1.27
 1.07 Intr +  31116  31173   58  2  1   53   94    28 0.018  -1.64
 1.08 Term +  43939  44039  101  2  2   90   52    74 0.000   2.29
 1.09 PlyA +  44786  44791    6                               1.05

 2.00 Prom +  45466  45505   40                              -1.76
 2.01 Init +  66506  66545   40  1  1   83   94    31 0.368   3.56
 2.02 Intr +  70118  70226  109  0  1   31   91    56 0.040  -0.46
 2.03 Intr +  90311  90476  166  2  1   52  100    76 0.001   5.16
 2.04 Intr +  97647  97738   92  2  2  113   64    10 0.016  -0.11
 2.05 Intr +  99883 100063  181  1  1   73   88   280 0.749  26.37
 2.06 Intr + 103096 103157   62  0  2  117   78    37 0.911   3.13
 2.07 Intr + 104933 105278  346  2  1  115   78   318 0.994  28.90
 2.08 Intr + 105529 105602   74  0  2   80   88    50 0.997   2.40
 2.09 Intr + 106087 106240  154  1  1  134  100   193 0.999  25.17
 2.10 Intr + 106443 106554  112  2  1   69   72   217 0.997  18.15
 2.11 Intr + 108119 108213   95  0  2   96   86   168 0.993  17.08
 2.12 Intr + 110566 110724  159  0  0  113   34   214 0.808  18.68
 2.13 Intr + 111145 111223   79  0  1  155   49   121 0.999  14.02
 2.14 Intr + 111343 111476  134  2  2   81   60   173 0.997  14.16
 2.15 Intr + 113348 113382   35  1  2   76   80    16 0.339  -3.38
 2.16 Intr + 115004 115092   89  2  2   87   45   114 0.995   6.61
 2.17 Intr + 115919 116004   86  0  2   63  103   111 0.881   9.64
 2.18 Intr + 118509 118573   65  2  2  117   96    90 0.997  10.22
 2.19 Term + 122825 122939  115  2  1  110   48   227 0.967  18.94
 2.20 PlyA + 123737 123742    6                               1.05

 3.10 PlyA - 124299 124294    6                               1.05
 3.09 Term - 127070 126994   77  0  2  125   50   142 0.994  12.10
 3.08 Intr - 129492 129302  191  2  2   80   71   101 0.863   6.83
 3.07 Intr - 138290 138125  166  0  1   90   86    49 0.721   3.92
 3.06 Intr - 141731 141666   66  0  0   66  113    17 0.497   0.88
 3.05 Intr - 142261 142153  109  1  1   88  115    -4 0.805   2.16
 3.04 Intr - 148274 148104  171  2  0  109   64    56 0.876   5.44
 3.03 Intr - 152454 152353  102  0  0  123   81    21 0.938   5.27
 3.02 Intr - 153927 153734  194  1  2   72   29   112 0.785   2.91
 3.01 Init - 169839 169770   70  0  1   94   83    53 0.762   6.61
 3.00 Prom - 172766 172727   40                              -5.16

 4.00 Prom + 177516 177555   40                               1.34
 4.01 Init + 182059 182168  110  0  2   87  -23   125 0.172  -0.79
 4.02 Intr + 182188 182225   38  1  2   85   78    48 0.284   1.41
 4.03 Intr + 183729 183831  103  1  1   57   77    71 0.257   2.13
 4.04 Intr + 184476 184567   92  0  2   57   59    86 0.305   2.24
 4.05 Intr + 184593 184750  158  1  2   27   81    90 0.117   1.93
 4.06 Intr + 204791 204880   90  1  0   83  -17   110 0.248   0.19
 4.07 Intr + 206611 206706   96  0  0   31  100    43 0.233   0.01
 4.08 Intr + 208623 208691   69  2  0   87  111    77 0.963   9.28
 4.09 Intr + 210506 210677  172  1  1   43   82   232 0.997  17.62
 4.10 Intr + 213636 213695   60  1  0   93   80    45 0.662   2.91
 4.11 Intr + 217932 218050  119  1  2  122   54   147 0.648  14.88
 4.12 Intr + 221859 221955   97  2  1  122  111   125 0.970  17.78

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term -  88078  87969  110  2  2  123   54    79 0.903   6.67


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597f:24231550_24454485|GENSCAN_predicted_peptide_1|297_aa
MEASSRHTSRSWGDSSTEGIYGILAFMERMQALSSFFVVTAAFNPHNNWCFGNCYYFHFT
HEDDTAQGGKNSSKFHAREMRSWDLIKALTHIPDYGGPTLSPVLDARDTDNKTHSLSSSK
LSVYQNTAVKTSPDLSSADFEALTSAITQSDQNGHKALCDADALCGHGHVCIILMLHLVL
RLRQPSIESCPDFQDYVWFQFLPPYVIIINLKFCEWIILPHLADVATEDQKVEVISLTQC
QVSTQIISRVKILSLITSAKSLRAVPTKQAVILIFRWLNQSMTLNEKPKPFPRICKN

>gi568815597f:24231550_24454485|GENSCAN_predicted_CDS_1|894_bp
atggaggcttccagccgccacacttctaggagctggggagacagcagcacagagggcatt
tatggaatacttgcatttatggaacgcatgcaggctctgagctcattctttgttgtgact
gctgcctttaaccctcacaataactggtgctttgggaactgttattatttccactttacc
catgaggacgacacggcccagggaggaaagaactcgtccaagttccatgccagggagatg
cggagctgggatttgatcaaggcacttactcacatacctgattatggagggcccactctg
agccctgtgctagatgccagagatacagacaataaaacacactccctgtcctcctcaaag
ctctcggtctaccagaacacagctgtgaagacttcacctgatttgtcatctgcagatttt
gaggcgctaactagtgccataactcagagtgaccaaaatggtcacaaggccttgtgtgac
gcagatgctctttgtggacacgggcacgtgtgcatcatcttgatgctccacctggtgctt
aggttacggcagccatcaatcgagtcctgtccagacttccaagactatgtctggtttcag
tttctaccaccatatgtaataatcatcaacttgaaattctgtgaatggatcatattaccc
catcttgcagatgtggccactgaggatcagaaagttgaagtgatttcattaacacagtgc
caagtttcaacacagataatctctcgtgtcaagatccttagcttaattacatctgcaaag
tcccttcgagcagtccccaccaagcaggcagtcatcttgatcttcagatggctaaatcag
agcatgacactgaatgaaaaacccaagcccttccccaggatctgcaagaactga

>gi568815597f:24231550_24454485|GENSCAN_predicted_peptide_2|730_aa
MCFCTAELAPGEAANPSSYSENVTERILDPSSPAPEPVSSSTMLTCFQYSALGAWSPQPW
AAPGYRRAQGILGCGRGRRKSPPTAWVSQENSRRPRAAQRRVFLKSPAPHTLGPGGMGDT
VLDEAAGRAAASCMLRSVRLLKNDPVNLQKFSYTSEDEAWKTYLENPLTAATKAMMRVNG
DDDSVAALSFLYDYYMGPKEKRILSSSTGGRNDQGKRYYHGMEYETDLTPLESPTHLMKF
LTENVSGTPEYPDLLKKNNLMSLEGALPTPGKAAPLPAGPSKLEAGSVDSYLLPTTDMYD
NGSLNSLFESIHGVPPTQRWQPDSTFKDDPQESMLFPDILKTSPEPPCPEDYPSLKSDFE
YTLGSPKAIHIKSGESPMAYLNKGQFYPVTLRTPAGGKGLALSSNKVKSVVMVVFDNEKV
PVEQLRFWKHWHSRQPTAKQRVIDVADCKENFNTVEHIEEVAYNALSFVWNVNEEAKVFI
GVNCLSTDFSSQKGVKGVPLNLQIDTYDCGLGTERLVHRAVCQIKIFCDKGAERKMRDDE
RKQFRRKVKCPDSSNSGVKGCLLSGFRGNETTYLRPETDLETPPVLFIPNVHFSSLQRSG
GAAPSAGPSSSNRLPLKRTCSPFTEEFEPLPSKQAKEGDLQRVLLYVRRETEEVFDALML
KTPDLKGLRNAISEKYGFPEENIYKVYKKCKRGILVNMDNNIIQHYSNHVAFLLDMGELD
GKIQIILKEL

>gi568815597f:24231550_24454485|GENSCAN_predicted_CDS_2|2193_bp
atgtgcttttgtaccgctgaacttgcccctggtgaggcagcaaatccaagttcctatagt
gagaatgtgacagagaggattttggacccaagtagtccagctccagaacctgtttcctcg
tccaccatgctgacctgctttcagtacagcgctctgggtgcctggagcccgcagccctgg
gcagccccgggctaccgcagggcgcaagggatcctgggctgcggccgagggcgccggaag
tcgccgccgaccgcctgggtctcgcaggaaaacagccggcgcccgcgagctgcccagcgt
cgggttttcctgaagagcccagctcctcacaccttggggcctggtgggatgggagacact
gtcctggatgaagccgctgggagagctgccgcctcctgtatgctgaggtctgtgcggctg
ctaaagaacgacccagtcaacttgcagaaattctcttacactagtgaggatgaggcctgg
aagacgtacctagaaaacccgttgacagctgccacaaaggccatgatgagagtcaatgga
gatgatgacagtgttgcggccttgagcttcctctatgattactacatgggtcccaaggag
aagcggatattgtcctccagcactgggggcaggaatgaccaaggaaagaggtactaccat
ggcatggaatatgagacggacctcactccccttgaaagccccacacacctcatgaaattc
ctgacagagaacgtgtctggaaccccagagtacccagatttgctcaagaagaataacctg
atgagcttggagggggccttgcccacccctggcaaggcagctcccctccctgcaggcccc
agcaagctggaggccggctctgtggacagctacctgttacccaccactgatatgtatgat
aatggctccctcaactccttgtttgagagcattcatggggtgccgcccacacagcgctgg
cagccagacagcaccttcaaagatgacccacaggagtcgatgctcttcccagatatcctg
aaaacctccccggaacccccatgtccagaggactaccccagcctcaaaagtgactttgaa
tacaccctgggctcccccaaagccatccacatcaagtcaggcgagtcacccatggcctac
ctcaacaaaggccagttctaccccgtcaccctgcggaccccagcaggtggcaaaggcctt
gccttgtcctccaacaaagtcaagagtgtggtgatggttgtcttcgacaatgagaaggtc
ccagtagagcagctgcgcttctggaagcactggcattcccggcaacccactgccaagcag
cgggtcattgacgtggctgactgcaaagaaaacttcaacactgtggagcacattgaggag
gtggcctataatgcactgtcctttgtgtggaacgtgaatgaagaggccaaggtgttcatc
ggcgtaaactgtctgagcacagacttttcctcacaaaagggggtgaagggtgtccccctg
aacctgcagattgacacctatgactgtggcttgggcactgagcgcctggtacaccgtgct
gtctgccagatcaagatcttctgtgacaagggagctgagaggaagatgcgcgatgacgag
cggaagcagttccggaggaaggtcaagtgccctgactccagcaacagtggcgtcaagggc
tgcctgctgtcgggcttcaggggcaatgagacgacctaccttcggccagagactgacctg
gagacgccacccgtgctgttcatccccaatgtgcacttctccagcctgcagcgctctgga
ggggcagccccctcggcaggacccagcagctccaacaggctgcctctgaagcgtacctgc
tcgcccttcactgaggagtttgagcctctgccctccaagcaggccaaggaaggcgacctt
cagagagttctgctgtatgtgcggagggagactgaggaggtgtttgacgcgctcatgttg
aagaccccagacctgaaggggctgaggaatgcgatctctgagaagtatgggttccctgaa
gagaacatttacaaagtctacaagaaatgcaagcgaggaatcttagtcaacatggacaac
aacatcattcagcattacagcaaccacgtcgccttcctgctggacatgggggagctggac
ggcaaaattcagatcatccttaaggagctgtaa

>gi568815597f:24231550_24454485|GENSCAN_predicted_peptide_3|381_aa
MDNSAQKNERTGKHPRRASEVQKALRICIHNTRVLLGSRPGVLEYLAPQCLLLPASLSMA
VSSSSVHRGSFSPKAGISTPVVTSHGARNDIPGPGFYNVIHQSPVSNSVSLSKKGTCMFP
SMCARLDTIISKYPAANAYTIPSDFISKRDFSNSCSSMFQLPSFMKALKFETPAPNYYNA
SVSCCKQRNNVCTRAGFMSKTQRGSFAFADKGPPPEVTSSSSHKTEEAALFPEHPLHGHY
DINESLVKQSPNTLMSCFKSKTNRGLKLTSTGPGPGYYNPSDCTKVPKKTLFPKNPILNF
SAQPSPLPPKPPFPGPGQYEIVDYLGPRKHFISSASFVSNTSRWTAAPPQPGLPGPATYK
PELPGKQSFLYNEDKKWIPVL

>gi568815597f:24231550_24454485|GENSCAN_predicted_CDS_3|1146_bp
atggacaactctgcacagaaaaatgaacgcactggcaaacatcccagacgtgccagtgaa
gtacagaaagcccttcgcatctgcatccacaacacgagggttctcctgggctctcggcct
ggggtgctggagtacctggctccacagtgcctcctgctgcctgcctcactctccatggca
gtcagttcctcttccgtccaccggggatcattctcacctaaagcaggaatcagcacccct
gtcgtcacctcccatggggcaaggaatgatatcccaggacctgggttctacaatgttatt
caccagtcaccggtgtccaacagtgtctcattgtccaagaaaggaacttgcatgtttccc
tcaatgtgcgcccgattggacaccatcatttctaaataccctgcagcgaatgcatacact
atcccatcggattttatttccaagagagactttagtaattcgtgttccagcatgttccag
ttgccaagctttatgaaagctctcaagtttgaaactcctgcaccaaactattacaatgcc
tctgtctcttgctgcaagcagagaaacaacgtctgtactcgagccgggtttatgtcaaaa
acccaaagaggatctttcgcttttgctgataaaggacctcccccagaggtgacttcatca
tccagtcataaaacagaggaggcagctctgtttccggagcacccactccacgggcattat
gatatcaacgaatcccttgtgaagcagtcgccaaatacattaatgtcttgttttaaatca
aaaaccaaccgtggattaaaactgacgtcaacaggcccgggacctggttattacaacccc
agtgattgcacaaaagttccaaaaaagactcttttcccgaaaaaccccatcctgaacttc
tctgctcagccttcgcctctgcctccgaagccacctttcccaggtcctggtcagtatgag
atcgtggactacttaggcccccgcaagcatttcatctctagtgcatcattcgtgtccaat
accagccggtggacagcggcgccgcctcagccaggcctgcctggcccagctacgtacaag
ccagagcttccaggaaagcagtccttcctctacaacgaggacaagaaatggatcccggtt
ctgtag

>gi568815597f:24231550_24454485|GENSCAN_predicted_peptide_4|402_aa
MVRRVLFPTTSGTGPPAGTASYLVRSRQLNLASPTSRPNIRESTFRRPRGVPGGQERRDM
FGPKSREGSGERWVFKDVLDLNTCLANLGPVALECSFQFCIEAKRSGGMGYLTKGSDMEL
TLPEFLLFVPSGSGFLAAADGGVSRWDEGRRSWSKPASGTEVLSPRVSAGFFAYKFGMYE
AKRIQNTQEAHQYAIPGVSSEPFSSEILSSHRKDVFCLQVALFCLAAHRENLIGALLAIF
GHLVVSIALNLQKYCHIRLAGSKDPRAYFKTKTWWLGLFLMLLGELGVFASYAFAPLSLI
VPLSAVSVIASAIIGIIFIKEKWKPKDFLRRYVLSFVGCGLAVVGTYLLVTFAPNSHEKM
TGENVTRHLLVEIILFCLLLYFYKEKNANNIVVILLLVALLX

>gi568815597f:24231550_24454485|GENSCAN_predicted_CDS_4|1206_bp
atggtgcgccgtgtcctcttccccacgacctcagggaccggtccccccgccggaactgct
tcctacctggtccggtcccggcagctgaatctggccagcccaacctcccggcctaacatt
cgcgagtccaccttccgccgtccgcgaggtgttccaggagggcaggaaaggagagatatg
tttggtcccaagtctcgcgagggctctggggagcgctgggtcttcaaggacgttttggat
ttgaatacttgcctcgccaacctgggtcccgttgccttggaatgttctttccagttttgc
atcgaggccaagaggagcgggggcatgggctaccttactaaaggaagtgacatggagtta
actttgccagaatttctcctcttcgtgccgagcggctcgggcttcctggcggcagcagat
ggtggagttagcaggtgggatgaggggaggcgttcttggtctaagcccgcttctggaaca
gaggtgctgtctcctcgagttagtgctggcttcttcgcctacaagtttgggatgtatgag
gcaaaaagaatacagaatacccaagaagctcaccaatatgccattcctggggtctccagc
gagccttttagctctgagatcctgtcatcccacaggaaggacgtgttctgcctgcaggtg
gctttattctgtcttgctgctcatcgggaaaacctgattggcgccctcttggcgatcttc
gggcacctcgtggtcagcattgcacttaacctccagaagtactgccacatccgcctggca
ggctccaaggatccccgggcctatttcaagaccaagacatggtggctgggcctgttcctg
atgcttctgggcgagctgggtgtgttcgcctcctacgccttcgcgccgctgtcactcatc
gtgcccctcagcgcagtttctgtgatagctagtgccatcataggaatcatattcatcaag
gaaaagtggaaaccgaaagactttctgaggcgctacgtcttgtcctttgttggctgcggt
ttggctgtcgtgggtacctacctgctggtgacattcgcacccaacagtcacgagaagatg
acaggcgagaatgtcaccaggcacctcctggtggagatcattctgttctgcttgctgctc
tacttctacaaggagaagaacgccaacaacattgtcgtgattcttctcttggtggcgtta
cttgnn