GENSCAN 1.0	Date run:  8-Nov-116	Time: 15:08:27

Sequence gi568815597f:170432149_170644846 : 212698 bp : 37.68% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   1268   1343   76  1  1   95   78    57 0.429   6.70
 1.02 Term +   2436   2587  152  1  2   26   49   130 0.549  -0.01
 1.03 PlyA +   5185   5190    6                               1.05

 2.04 PlyA -   8238   8233    6                               1.05
 2.03 Term -  21624  21023  602  1  2   73   38   136 0.686   0.80
 2.02 Intr -  22874  22726  149  1  2   21   84    56 0.612  -2.54
 2.01 Init -  25109  24877  233  2  2   50  113   186 0.650  15.08
 2.00 Prom -  28538  28499   40                              -6.95

 3.00 Prom +  29747  29786   40                              -5.35
 3.01 Sngl +  32754  33143  390  2  0   99   54   399 0.964  33.57
 3.02 PlyA +  33168  33173    6                               1.05

 4.00 Prom +  34169  34208   40                              -6.15
 4.01 Sngl +  34262  34939  678  1  0   45   48   295 0.735  17.13
 4.02 PlyA +  34976  34981    6                               1.05

 5.00 Prom +  37402  37441   40                              -3.65
 5.01 Init +  57947  58022   76  1  1   95   89    22 0.268   4.30
 5.02 Term +  71593  71711  119  2  2   99   42   107 0.548   4.92
 5.03 PlyA +  72944  72949    6                               1.05

 6.03 PlyA -  73312  73307    6                               1.05
 6.02 Term -  74566  74319  248  2  2   52   48   127 0.053   0.07
 6.01 Init -  81363  81270   94  0  1  103   77   131 0.856  14.09
 6.00 Prom -  82275  82236   40                              -8.85

 7.00 Prom +  96418  96457   40                              -3.55
 7.01 Init + 100076 100259  184  1  1   76   59    87 0.228   3.93
 7.02 Intr + 107062 107423  362  2  2   60   83   303 0.612  21.01
 7.03 Intr + 107953 107993   41  0  2   97    9    52 0.739  -5.70
 7.04 Intr + 110343 110444  102  0  0  131  100   131 0.971  16.97
 7.05 Intr + 112557 112697  141  0  0   49  109   183 0.950  15.05
 7.06 Intr + 119867 120282  416  2  2   66   90   577 0.013  48.52
 7.07 Intr + 120537 120562   26  1  2   76  106   -12 0.000  -3.77
 7.08 Term + 138129 138365  237  2  0   77   54   178 0.839   8.48
 7.09 PlyA + 138447 138452    6                               1.05

 8.00 Prom + 139486 139525   40                              -6.15
 8.01 Sngl + 141797 142498  702  1  0   74   35   227 0.516  11.96
 8.02 PlyA + 142840 142845    6                               1.05

 9.06 PlyA - 143249 143244    6                               1.05
 9.05 Term - 167489 167406   84  2  0   80   42   103 0.859   1.57
 9.04 Intr - 169711 169357  355  0  1    5   39   297 0.581  10.87
 9.03 Intr - 169858 169759  100  2  1   12   76    49 0.551  -5.65
 9.02 Intr - 170505 169918  588  1  0   10   47   361 0.381  15.87
 9.01 Init - 171542 171503   40  2  1   73  105    71 0.388   7.70
 9.00 Prom - 176573 176534   40                              -4.15

10.03 PlyA - 177331 177326    6                               1.05
10.02 Term - 179014 178453  562  0  1   18   41   236 0.761   4.76
10.01 Init - 181506 181361  146  0  2   68   98   152 0.758  13.84
10.00 Prom - 195590 195551   40                              -3.65

11.04 PlyA - 196858 196853    6                               1.05
11.03 Term - 199012 198866  147  1  0   95   52   106 0.311   4.62
11.02 Intr - 202900 202729  172  0  1   76   75    25 0.050  -0.98
11.01 Intr - 204903 204836   68  0  2   71   94    70 0.079   2.68

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl -  74741  74319  423  2  0   50   48   192 0.855   7.44
S.002 Term + 119867 120314  448  2  1   66   45   613 0.987  48.50
S.003 Term - 122699 122634   66  2  0  132   53    20 0.924  -0.14


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597f:170432149_170644846|GENSCAN_predicted_peptide_1|75_aa
MDRAGEHSSNQTYTGTENQIPRIHICDSAAAGGPETTRENHWTREILYIIDTLVSLDTEW
ISEVKCNFADLDTMV

>gi568815597f:170432149_170644846|GENSCAN_predicted_CDS_1|228_bp
atggatagagctggagagcattcgtctaaccaaacttacacaggaacagaaaaccaaata
ccacgtattcacatttgtgattctgctgctgctggtggtccagagaccacacgtgagaac
cactggactagggagatcttgtacatcatagacacattggtttctctggacacagaatgg
atctcagaagtcaagtgtaattttgcagatttggacactatggtttaa

>gi568815597f:170432149_170644846|GENSCAN_predicted_peptide_2|327_aa
MNINKKDVQRKTPSEGHQHQRPKLDKSTKMKKNQCKKVENSKNQNASSPPKDHNSSPARE
QSWMENEFDELTEVGFRRTTWKLNNLLLNDYWVNNKIKTEKNKFFETNENKDTTYQNLWD
PAKAVLRGLEVLAWTIRKEKEIKGIHIGREKVKLSLFADDMIVYLENPIISAKNLLKLIS
NFDKVSRYKVNMQKPQAFLYTNNSQITSELPFTTDTKRIKYLGIQLTKDVKDLFKENYKP
LLKEIREDTNKWKSIPCSWIRRISFVKMAILQPNVIDRFNAIPMKLPLTFFTELEKNYLK
FHMEPKKSSYSQDNPKQKEQSWRHHTT

>gi568815597f:170432149_170644846|GENSCAN_predicted_CDS_2|984_bp
atgaacatcaacaaaaaggacgtccaaagaaaaaccccatccgaaggtcaccaacatcaa
agaccaaagctagataaatccacaaagatgaagaaaaaccagtgtaaaaaggttgaaaat
tccaaaaaccagaatgcctcttctcctccaaaggatcacaactcctcgccagcaagagag
caaagctggatggagaatgagtttgacgaactgacagaagtaggcttcagaagaacaaca
tggaaactgaacaacttgctcctgaatgactactgggtaaataacaaaattaagacagaa
aaaaataagttctttgaaaccaatgaaaacaaagacacaacgtaccagaatctctgggac
ccagctaaagcagtgttgagaggattggaagttttggcctggacaatcaggaaagagaaa
gaaataaagggtattcatataggaagagagaaagtcaaattgtctctgtttgcagatgac
atgattgtgtatttagaaaaccccatcatctcagccaaaaatctccttaagttgataagc
aactttgacaaagtctcaagatacaaagtcaatatgcaaaaaccacaggcattcctatac
accaataatagccaaatcacgagtgaactcccattcacaactgatacaaagagaataaaa
tatctaggaatacaacttacaaaggatgtgaaggacctcttcaaggagaactacaaacca
ctgctcaaggaaataagagaagacacaaacaaatggaaaagcattccatgctcatggata
agaagaatcagtttcgtgaaaatggccatactgcagcccaatgtaattgatagattcaat
gctattcccatgaagctaccattgactttcttcacagaattagaaaaaaactaccttaaa
tttcatatggaaccaaaaaagagctcatatagccaagacaatcctaaacaaaaagaacaa
agctggaggcatcacaccacctga

>gi568815597f:170432149_170644846|GENSCAN_predicted_peptide_3|129_aa
MGKKQSRKTENSKNQSASPPPKECSSSPAVEQSWTENDFDKLQQEGFRRSNFSELKEEVR
THGKEVKNVEKRLDEWLTRITNAEKSLKDLKELKTTTRDLRDECTSLSSQFNQLEETVSV
MEDQMNEMK

>gi568815597f:170432149_170644846|GENSCAN_predicted_CDS_3|390_bp
atggggaaaaaacagagcagaaaaactgaaaattctaaaaatcagagtgcctctcctcct
ccaaaggaatgcagctcctcaccagcagtggaacaaagctggacggagaatgactttgac
aagttgcaacaagaaggcttcagacgatcaaacttctctgagctaaaggaggaagttcga
actcatggcaaagaagttaaaaacgttgaaaaaagattagacgaatggctaactagaata
accaatgcagagaagtccttaaaggacctgaaggagctgaaaaccacaacacgagatcta
cgtgatgaatgcacaagcctcagtagccaattcaatcaactggaagaaacggtatcagtg
atggaagatcaaatgaatgaaatgaagtga

>gi568815597f:170432149_170644846|GENSCAN_predicted_peptide_4|225_aa
MGDFNTPLPTLDRSTRHKVNKDIQELNLALHQADLIDIYRTLHPISTEYTFFSAPHCTYS
KIDHIVGNKALLSKCKRTEMITNCLSDHSAIKLEWRIKKLTQNSSSTWKLNNLLLNDYWV
HNEMKAEIKMFFETNENKDTTYQNLWDTFKAVCRGKFIALNAHKRKQERSKIDTLTSRLK
ELEKQEQTHSKASRRQEITKIGAELKEIETQKTLQKNQRIQELVF

>gi568815597f:170432149_170644846|GENSCAN_predicted_CDS_4|678_bp
atgggagactttaacaccccactgccaacattagacaggtcaacaagacataaagttaac
aaggatatccaggaattgaacttagctctgcaccaagcagacctaatagacatctacaga
actctccaccccatatcaacagaatatacattcttctcagcaccacattgcacttattcc
aaaattgaccacatagttggaaataaagcactcctcagcaaatgtaaaagaacagaaatg
ataaccaactgtctctcagaccacagtgcaatcaaactagaatggaggattaagaaactc
actcaaaacagctcaagtacatggaaactgaacaacctgctcctgaatgactactgggta
cataacgaaatgaaggcagaaataaagatgttctttgaaaccaatgagaacaaagacaca
acataccagaatctctgggacacattcaaagcagtttgtagagggaaatttatagcacta
aatgcccacaaaagaaagcaggaaagatctaaaattgacaccctaacatcacgattaaaa
gaactagagaagcaagagcaaacacattcaaaagctagcagaaggcaagaaataactaag
atcggagcagaactgaaggaaatagagacacaaaaaacccttcaaaaaaatcaacgaatc
caggagctggtattttga

>gi568815597f:170432149_170644846|GENSCAN_predicted_peptide_5|64_aa
MDGARGHYHKQINAGTENQILHVITYVLSREQLMTRQQLHEVYLTVEMLNSLAPGPYIKL
RRPL

>gi568815597f:170432149_170644846|GENSCAN_predicted_CDS_5|195_bp
atggatggagctagaggccattatcataagcaaattaatgcaggaacagaaaaccaaata
ctgcatgttatcacttatgttttatcccgtgaacagctcatgactagacaacaactgcat
gaggtgtacttaactgttgagatgctgaattcattggcaccaggtccctacatcaaactc
agaagacctctttaa

>gi568815597f:170432149_170644846|GENSCAN_predicted_peptide_6|113_aa
MTTKATGTRKGSGNQNPRTWWLLLAEVVVVEVLEVLARAIRKEKEIKGIQIGKEEVKLSL
FADDMIVYLENPIVSAQNLLKLISNFSKVSGYKINMQNSQAFLHTNNRLTAKS

>gi568815597f:170432149_170644846|GENSCAN_predicted_CDS_6|342_bp
atgaccaccaaggccacaggaacaaggaaaggaagtggtaaccagaatccaagaacttgg
tggctgttgcttgctgaagttgtagttgtagaagtattggaagttctggccagggcaatc
aggaaagagaaagaaataaagggtattcaaataggaaaagaggaagtcaaattgtctctg
tttgcagatgacatgattgtatatttagaaaacccaatcgtctcagcccaaaatctcctt
aagctgataagcaacttcagcaaagtctcaggatacaagattaatatgcaaaattcacaa
gcattcctacacaccaataacagactaacagccaaatcatga

>gi568815597f:170432149_170644846|GENSCAN_predicted_peptide_7|502_aa
MAQGWAGFSEEELRRLKQTKGYKMGLQWFNSWVLRGRGGDAALAGKGGVEAATFVLAEGA
VNPFEPQRRLPAKKSRQQLQREKALVEQSQKLGLQDGSTSLLPEQLLSAPKQRVNVQKPP
FSSPTLPSHFTLTSPVGDGQPQGIESQPKELGLENSHDGHNNVEILPPKPDCKLEKKKVE
LLTISIGPEIGTCGETQEKSRWEVLQQEQRLMEEKNKRKKALLAKAIAERSKRTQAETMK
LKRIQKELQALDDMVSADIGILRNRIDQASLDYSYARKRFDRAEAEYIAAKLDIQRKTEI
KEQLTEHLCTIIQQNELRKAKKLEELMQQLDVEADEETLELEVEVERLLHEQEVESRRPV
VRLERPFQPAEESVTLEFAKENRKCQEQAVSPKVDDQCGNSSSIPFLSPNCPNQEVFRLP
FLLKDQNSSPAREQNWTENEFDKWTEVVFRRWVITNSTELKEHVLTQCKEAKNLDKRLEE
LLTRITSLEKNINDLMDLKNTA

>gi568815597f:170432149_170644846|GENSCAN_predicted_CDS_7|1509_bp
atggcgcaaggttgggcaggattctctgaggaggaactgaggagactaaagcagactaaa
ggttacaagatgggtttacagtggtttaattcttgggtcttaaggggaagaggcggggat
gcagctttggcggggaaagggggcgtggaagcggctacgtttgtgttagcggaaggcgct
gtaaatccatttgaaccacagcgacgtctccccgcgaagaaaagtcgacaacaacttcag
cgagaaaaagcccttgtagagcaaagccaaaaacttgggcttcaagatggatcaacctca
ttacttccagagcagctgctttcagcaccaaaacagagagttaacgttcaaaaaccacct
ttttcttcccctactcttccgagtcatttcactctcacctcccccgttggtgatggacaa
ccacagggcattgaaagtcagccaaaggaactgggacttgagaattcccatgatggtcac
aacaatgttgagattctacctccaaagccagattgcaaattggagaaaaagaaagtggaa
ttgttaactatttccattggcccagaaattggaacttgtggagagacgcaagaaaaatct
cgttgggaagtcctccaacaagaacaacggctaatggaagagaaaaataaacgtaaaaaa
gctcttttggctaaagctattgcagaaagatccaaaagaactcaggcagagaccatgaaa
ctaaagcggatccagaaggagttgcaggctttagatgacatggtgtcagctgacattgga
attctcaggaaccggattgatcaggccagcttagactattcatacgctcggaagcggttt
gacagggctgaagcagagtacattgcagcaaagctagatatacagcgcaagactgagata
aaagagcaactcactgaacacctttgtacgatcatacagcaaaatgagctccgaaaggcc
aagaagttggaggagttgatgcaacaactagatgtagaagccgatgaagagactttggag
cttgaggtggaggtcgagagattgctacacgaacaagaagtagaatcaaggagaccagtg
gttcgtttagagaggccatttcagcctgcggaggagagtgtgacattagaatttgctaaa
gagaacagaaagtgtcaagaacaagctgtttccccaaaggtagatgaccagtgtggaaat
tccagtagcatcccctttcttagtccaaactgcccaaatcaagaagtgttccgtttaccc
tttttactgaaagatcaaaactcctcaccagcaagggaacaaaactggacggaaaatgaa
tttgacaaatggacagaagtagtcttcagaaggtgggtaataacaaattccaccgagtta
aaggagcatgttctaacccaatgcaaggaagctaagaaccttgataaaaggctagaggaa
ttgctaactagaataaccagtttagagaagaacataaatgacctgatggacctgaaaaac
acagcatga

>gi568815597f:170432149_170644846|GENSCAN_predicted_peptide_8|233_aa
MLPDFKLCYKATVTKTACYWHQNRYTDQWNRTETSEITPHIYSHLIFDKPDKNKQWGKDS
LFNKWCWENWLAICRKLKLDPLLTPYTKINSRWIKDLNIRPKSIKTLEENLGNTIQDIGM
GKDFMTETPKAVATKAKNDKWDPIKLKSFCTAKETIIRVNRQPTEWEKIFAIYPSDKGLI
SRICKELQQIYKKKTNNPIKKWVKDLDRRFSKEDIYAANKHLKKCSSLFIREM

>gi568815597f:170432149_170644846|GENSCAN_predicted_CDS_8|702_bp
atgctacctgacttcaaactatgctacaaggctacagtaaccaaaacagcatgttactgg
caccaaaacagatatacagaccaatggaacagaacagaaacctcagaaataacaccacac
atctacagccatctgatctttgacaaacctgacaaaaacaagcaatggggaaaggattcg
ctatttaacaaatggtgttgggaaaactggctagccatatgcagaaaactgaaactggac
cccttgctcacaccttatacaaaaattaactcaagatggattaaagatttaaatataaga
cctaaaagcataaaaaccctagaagaaaatctaggcaataccattcaggacataggcatg
ggcaaagacttcatgactgaaacaccaaaagcagtggcaacaaaagccaaaaatgacaaa
tgggatccaattaaactaaagagcttctgcacagcaaaagaaactatcatcagagtgaac
aggcaacctacagaatgggagaaaatttttgcaatctatccatctgacaaagggctaata
tccagaatctgcaaagaacttcaacaaatttacaagaaaaaaacaaacaaccccatcaaa
aagtgggtgaaggatttggacagacgattttcaaaagaagacatttatgcagccaacaaa
catttgaaaaaatgctcatcacttttcattagagaaatgtaa

>gi568815597f:170432149_170644846|GENSCAN_predicted_peptide_9|388_aa
MKENDAREMGDKQGRGWNSLDGSEEDRKMWESLELPRDLLNGFDQNADNDMDNEIQSEMV
SDGDEELVGNWSKGDSCYVLAKRLVAFCPFPRDLWDFGLERDDLGYLVEEISKQQCIQEV
TRVLLKAFSFIRETDHKSSENLQPDNAIENKIAFSKKKFKPVAEICISNKEPNVNPQDNG
EMSPGHVRDLHGSPSQHRPRGLGGKNGFTAAPAMAEGSNIELWLWLQRVQAPNHGSFHVV
LSLVQKMYGNTWMTRQKLAAGAGSSWRTSARAAQKGNVGLEPPSTVPTGVPPSGAVRRRP
PSSRPQNGRSTDSLHHAPGKATSTQCQPLKAAMREAVPCKATEAELPKTMGTHLLHQHDL
DLIEHLDVEPADMEGHCDAKIMTKTVPN

>gi568815597f:170432149_170644846|GENSCAN_predicted_CDS_9|1167_bp
atgaaggaaaatgatgctcgagagatgggagacaaacaaggcagaggttggaacagtttg
gatggctcagaagaagacaggaaaatgtgggaaagtttggaactccctagagacttgtta
aatggctttgatcaaaatgctgataatgatatggacaatgaaatccagtctgagatggtc
tcagatggagatgaggaacttgttgggaactggagcaaaggtgactcttgttatgtttta
gcaaagagactggtggcattttgtcccttccctagagatttgtgggactttggacttgag
cgggatgatttggggtacctggtggaagaaatttctaagcagcaatgcattcaagaggtt
actcgtgtgctgttaaaggcattcagttttataagggaaacagaccataaaagttcagaa
aatttgcagcctgacaatgccatagaaaataaaatagcattttctaagaagaaattcaag
ccagttgcagaaatttgcataagtaataaggagccgaatgttaatccccaagacaatggt
gaaatgtctccaggccatgtcagagaccttcatggcagcccctcccaacacaggcccaga
ggcctaggaggaaaaaatggtttcacagctgctccagctatggctgaagggtccaacata
gagctctggctgtggcttcagagggtgcaagccccaaaccatggcagcttccatgtggtg
ttgagcctagttcagaagatgtatggaaacacctggatgaccaggcagaagcttgctgca
ggagcaggttcctcatggagaacctctgctagggcagcacagaagggaaatgtggggttg
gaacccccaagcacagtccctactggagtaccacccagtggagctgtgagaagaaggcca
ccatcctccagaccccagaatggtagatccactgacagcttgcaccatgcacctggaaaa
gccacaagcactcaatgccagcccctgaaagcagctatgagggaggcggtaccctgcaaa
gccacagaggcagagctgcccaagaccatgggaacccacctcttgcatcagcatgacctg
gatttgattgaacacttagatgtagaaccagcagatatggagggacactgtgatgccaaa
ataatgaccaaaacagttccaaattga

>gi568815597f:170432149_170644846|GENSCAN_predicted_peptide_10|235_aa
MRKIQHKKAQNSKNQNASSPSKNHNFLPAKEQNWTENEFDEMTEVGFRRSWFFDKTNKID
RLLARPIRKKRQNNQIDTVKNDKGDITTDPTEIQTTIREYYKYFYTNKLENAEEMDNFLD
TSTLQRLNQEEDESLNRPITSSEIEAVIDSLSTKIRLGTDGFTTEFYQRYNEELVPFLLK
LFQTIEKEGLLSNSFYEASIILIPKPGKDTTNKENFRPISLMNIDAKILNKILAN

>gi568815597f:170432149_170644846|GENSCAN_predicted_CDS_10|708_bp
atgaggaaaatccagcacaaaaaggctcaaaattccaaaaaccagaatgcctcttctcct
tcaaagaatcacaacttcttgccagcaaaggaacaaaactggaccgagaatgagtttgat
gaaatgacagaagtgggcttcagaaggagctggttttttgacaagactaacaaaatagac
agactgctagccagaccaataaggaagaaaagacagaataatcaaatagacacagtaaaa
aatgataaaggggatatcaccactgatcccacagaaatacaaactaccatcagagaatac
tataaatacttctacacaaataaactagaaaatgcagaagaaatggataatttcctggac
acatctaccctccaaagactaaatcaggaagaagatgaatccctgaatagaccaataaca
agttctgaaattgaggcagtaattgatagcctatcaacgaaaatacgcttaggtacagat
ggattcacaactgaattctaccagaggtacaatgaggagctggtaccattccttttgaaa
ctattccaaacaatagaaaaagagggactcctctctaactcattttatgaggccagcatc
atcctgataccaaaacctggcaaagacacaacaaacaaagaaaatttcaggccaatatcc
ctgatgaacatcgatgcaaaaatcctcaataaaatactggcaaactga

>gi568815597f:170432149_170644846|GENSCAN_predicted_peptide_11|128_aa
GSGILPLASVLEAKEQLTEGSVSILHNQSFPLKLGLLETMDRMTLICVCFLPCPVSSFLS
NDRRTSNLQCGEGKVENRKRPNTPAGLRSECIFRPNSDPSFLSGRGFPAGSPITPARASG
TEFGSPWA

>gi568815597f:170432149_170644846|GENSCAN_predicted_CDS_11|387_bp
ggtagcggcatcctgcctttggcttcagtgcttgaagccaaagaacaattaacagaaggt
agtgtcagcatactccacaaccaatcatttcctctgaagcttgggcttttagaaacaatg
gacagaatgactttgatctgtgtttgcttccttccttgccctgtatcatcattcctgagt
aatgacaggaggactagcaaccttcaatgtggagaagggaaggtggaaaatagaaaaagg
cccaacacaccagctggcctgcggtcagagtgcatcttcaggcctaattctgacccatcc
ttcctcagtgggcggggctttcctgcaggatctccaataactccagccagagcctcaggg
acagaatttggatctccctgggcctga