GENSCAN 1.0 Date run: 6-Nov-116 Time: 23:11:30 Sequence gi568815597f:163226052_163455466 : 229415 bp : 37.83% C+G : Isochore 1 ( 0 - 43 C+G%) Parameter matrix: HumanIso.smat Predicted genes/exons: Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr.. ----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------ 1.04 PlyA - 767 762 6 1.05 1.03 Term - 2757 2273 485 1 2 -20 43 328 0.521 11.42 1.02 Intr - 3054 2815 240 1 0 38 34 190 0.232 5.20 1.01 Init - 9416 9401 16 2 1 82 94 48 0.336 5.23 1.00 Prom - 21599 21560 40 -5.05 2.00 Prom + 24811 24850 40 -6.75 2.01 Init + 29315 29719 405 1 0 68 13 245 0.413 11.64 2.02 Intr + 39954 40147 194 2 2 77 78 87 0.330 3.97 2.03 Intr + 59753 59796 44 2 2 127 106 48 0.339 7.47 2.04 Term + 80678 80862 185 0 2 32 38 146 0.024 0.72 2.05 PlyA + 81570 81575 6 1.05 3.03 PlyA - 81730 81725 6 1.05 3.02 Term - 83643 83489 155 1 2 18 42 154 0.475 0.90 3.01 Init - 86194 86155 40 1 1 86 94 45 0.708 5.31 3.00 Prom - 88313 88274 40 -3.95 4.03 PlyA - 90676 90671 6 1.05 4.02 Term - 96009 95656 354 0 0 77 43 405 0.337 28.41 4.01 Init - 96697 96686 12 1 0 85 70 11 0.281 -1.86 4.00 Prom - 97328 97289 40 -6.15 5.00 Prom + 99510 99549 40 -7.55 5.01 Init + 100001 100123 123 1 0 78 93 105 0.634 10.22 5.02 Intr + 117682 117819 138 0 0 55 70 74 0.556 2.04 5.03 Intr + 121712 121887 176 1 2 53 -1 238 0.985 9.22 5.04 Intr + 122894 123029 136 2 1 93 68 167 0.999 14.85 5.05 Term + 129284 129418 135 1 0 87 38 144 0.987 6.34 5.06 PlyA + 130149 130154 6 1.05 6.00 Prom + 149034 149073 40 -5.95 6.01 Init + 164616 164648 33 2 0 100 68 16 0.321 0.73 6.02 Intr + 172396 172476 81 0 0 76 90 41 0.375 2.02 6.03 Intr + 174055 174183 129 0 0 124 56 33 0.617 3.67 6.04 Intr + 176260 176359 100 0 1 106 42 76 0.050 3.56 6.05 Intr + 180919 181039 121 2 1 26 45 107 0.030 -1.17 6.06 Term + 183246 183573 328 0 1 84 55 178 0.437 7.30 6.07 PlyA + 186010 186015 6 1.05 7.04 PlyA - 186312 186307 6 1.05 7.03 Term - 186568 186494 75 1 0 91 35 60 0.046 -2.14 7.02 Intr - 192567 192440 128 1 2 36 70 78 0.111 0.28 7.01 Init - 197113 197047 67 1 1 82 59 124 0.515 10.19 7.00 Prom - 206537 206498 40 -3.25 8.00 Prom + 211147 211186 40 -3.45 8.01 Init + 216193 216224 32 0 2 83 100 31 0.065 3.06 8.02 Intr + 217519 217564 46 1 1 77 91 35 0.031 0.19 8.03 Intr + 227624 227657 34 1 1 127 119 -21 0.002 1.78 8.04 Term + 228554 228687 134 0 2 41 37 100 0.002 -2.53 8.05 PlyA + 229055 229060 6 1.05 Suboptimal exons with probability > 0.800 Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr.. ----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------ S.001 Term - 134689 134627 63 1 0 121 38 91 0.804 4.31 Predicted peptide sequence(s): Predicted coding sequence(s): >gi568815597f:163226052_163455466|GENSCAN_predicted_peptide_1|246_aa MSVAGEWGTAVKILKNLEMTLERVTGRGWNSLEDSEEDRKIWENLELPRNLLNGFGQNAD SDVDNKVQAELVSHGNEELLGNGGKDLWNFELETDDLGYLVEEISKWQSIEGEVEDESLE NLQPDDAIEKKNPFSGEKFKSAAEIYISNQEPNVNHQDNGEKVSRVCQRLSQQPLPSQAR RPRREKWCPGPGPGPPCCVQPWDLVPCIPATPTIAKRGQSTAQSIASEGESPKPWQLPCG VGPVDA >gi568815597f:163226052_163455466|GENSCAN_predicted_CDS_1|741_bp atgtccgtggctggagaatggggcactgctgtaaagatactaaaaaatttggaaatgact ttggaacgggtaacaggcagaggttggaacagtttggaggactcagaagaagacaggaag atatgggaaaatttggaacttcctagaaacttgttgaatggttttggccaaaatgctgat agtgatgtggacaataaggtccaggctgagctggtctcacatggaaatgaggaacttctt gggaacgggggcaaagatctgtggaactttgaacttgaaacagatgatttagggtatctg gtggaagaaatttctaagtggcaaagcattgaaggggaagtagaggatgaaagtttggaa aatttgcagcctgatgatgcaatagaaaagaaaaacccattttctggggagaaattcaag tctgctgcagaaatttacataagtaatcaggagccaaatgttaatcaccaagacaatggg gaaaaggtgtccagggtgtgtcagagactttcacagcagccccttccatcacaggcccgg aggcctaggagggaaaaatggtgtcctgggccgggtccagggcccccttgctgtgtgcag ccttgggacttggtgccctgcatcccagccactccaaccatagctaaaaggggtcagagt acagctcagtccattgcttcagagggcgaaagccccaagccttggcagcttccatgtggt gttgggcctgtggatgcatag >gi568815597f:163226052_163455466|GENSCAN_predicted_peptide_2|275_aa MGKFLDTYILPRLNQEEVDSLNIPITGSEIVAIINSLPTKKSPGPDGFTAEFYQRYKEEL VPFLLKLFQSIEKEGILPNSFYEASIILIPKPGRDTTKKENFRPISLMNIDAKILSKILA NRIQQHIKKLIHHDQSYQPNCLLDSRWRLQQSQHPGQQQFSVELISYSTATPSTSEGSAP VFITTPIYGKTQTPASKLEKPYEDRAYFPFAFAMGNLDTKIHTRMPCEDKGYWGDKSTSQ GMPKIASKPPEARERHETDSSSQPSEGINLADILI >gi568815597f:163226052_163455466|GENSCAN_predicted_CDS_2|828_bp atgggtaaattcctcgacacatacatcctcccaagactaaaccaggaagaagttgactct ctgaatataccaataacaggctctgaaatagtggcaataatcaatagcttaccaaccaaa aagagtccaggaccagatggattcacagctgaattctaccagaggtacaaggaggaactg gtaccattccttctgaaactattccaatcaatagaaaaagagggaatcctccctaactca ttttatgaggccagcatcatcctgataccaaagccgggcagagacacaaccaaaaaagag aattttagaccaatatccttgatgaacattgatgcaaaaatcctcagtaaaatactggca aaccgaatccagcagcacatcaaaaagcttatccaccatgatcaaagttatcagcccaac tgcctactggactccaggtggaggctgcaacagtctcaacatccaggccagcaacagttc agtgttgaactaatctcctacagcactgccaccccatcaacctcagagggatctgctcct gtttttattacaaccccaatttatggcaagacccagaccccggcatctaagttagaaaag ccatatgaagaccgtgcctacttcccctttgcctttgccatgggaaatttggacacaaaa atacacacaagaatgccatgtgaagataaaggatattggggtgataaatctacaagccaa ggaatgccaaagattgccagcaaaccaccagaagccagggagaggcatgaaaccgattca tcctcacagccctcagaaggcatcaaccttgctgatatcttaatctag >gi568815597f:163226052_163455466|GENSCAN_predicted_peptide_3|64_aa MVEEEAGMSYMAAGIWKKLIPGLMNDFMTLVEEAPEDVMEIARELELEVAPEDVTKLLQY YNKT >gi568815597f:163226052_163455466|GENSCAN_predicted_CDS_3|195_bp atggtggaagaggaagcaggcatgtcttacatggcagcaggaatttggaagaagttaatt ccaggccttatgaatgacttcatgactttagtggaggaagcacctgaagatgtgatggaa atagcaagagaactagaattagaagtggcacctgaagatgtgactaaattgctgcaatat tataataaaacttga >gi568815597f:163226052_163455466|GENSCAN_predicted_peptide_4|121_aa MLSRCRPPTGRRRVRGAATSKVKNQQTSTVITFQTCRLLLEVPPHSAKPTSNRDGCRLGS RDARQVGLELSWKGQGAGRNHCSRSWRRVGTSDCRKWEHRGFGEETGVERLAHLCVTSAS V >gi568815597f:163226052_163455466|GENSCAN_predicted_CDS_4|366_bp atgctgagcagatgccggccgccgacaggaagacggcgagttcggggagcagctacaagc aaagtcaaaaatcagcaaacgtcaaccgtcatcacttttcaaacttgccgcctcctactg gaagtcccgccccattccgccaagcccacgtccaaccgcgacggatgccggttgggctca agagacgccaggcaggtgggactggagttgtcatggaaggggcagggcgcagggcggaac cattgctcgcggagctggcgtcgagtcggaacctcggactgcaggaagtgggagcaccgc ggtttcggggaagagaccggggttgagcgtctagcccatctctgcgtgacttccgccagc gtttag >gi568815597f:163226052_163455466|GENSCAN_predicted_peptide_5|235_aa METLSFPRYNVAEIVIHIRNKILTGADGKNLTKNDLYPNPKNELKLSVVSLKEIQESLKT KIVDSPEKLKNYKEKMKDTVQKLKNARSLNLEDQIESDESELKKLKTEENSFKRLMIVKK EKLATAQFKINKKHEDVKQYKRTVIEDCNKVQEKRGAVYERVTTINQEIQKIKLGIQQLK DAAEREKLKSQEIFLNLKTALEKYHDGIEKAAEDSYAKIDEKTAELKRKMFKMST >gi568815597f:163226052_163455466|GENSCAN_predicted_CDS_5|708_bp atggaaactttgtctttccccagatataatgtagctgagattgtgattcatattcgcaat aagatcttaacaggagctgatggtaaaaacctcaccaagaatgatctttatccaaatcca aagaatgaactaaaattgtcggtggtttctttgaaagaaatacaagagagtttgaaaaca aaaattgtggattctccagagaagttaaagaattataaagaaaaaatgaaagatacggtc cagaagcttaaaaatgccagaagcctgaacttggaggaccaaattgagagtgatgagtca gaactgaagaaattgaagactgaagaaaattcgttcaaaagactgatgattgtgaagaag gaaaaacttgccacagcacaattcaaaataaataagaagcatgaagatgttaagcaatac aaacgcacagtaattgaggattgcaataaagttcaagaaaaaagaggtgctgtctatgaa cgagtaaccacaattaatcaagaaatccaaaaaattaaacttggaattcaacaactaaaa gatgctgctgaaagggagaaactgaagtcccaggaaatatttctaaacttgaaaactgct ttggagaaataccacgacggtattgaaaaggcagcagaggactcctatgctaagatagat gagaagacagctgaactgaagaggaagatgttcaaaatgtcaacctga >gi568815597f:163226052_163455466|GENSCAN_predicted_peptide_6|263_aa MPGTHCLSGEWDDTFTSENLKQKSTPIGSLRSEFLDKKVSEQLCCRRSQGVGGFKPWGFF YEPSAEKGAFHMLQPAVRYSLSFLGVFCGYSGSRAKLWAQLALQSDIKEVVQCPCVIIGS HVDTPWAKQPSLQHLHKSSRGGWALPVQGLPVEAGVDNSPYYASPSSHRHGEKAVTSNIL QMRMQKRLRSLCIWPEVNGFELGVHICLASKLAVFSLCYAVLWAGEELWKAVEEKKGEMR MMVSKSRACGDSQKEDLEWPKGS >gi568815597f:163226052_163455466|GENSCAN_predicted_CDS_6|792_bp atgcctggaacacattgtctcagtggagaatgggatgacacatttacttctgaaaacctt aagcagaaatctactccaattgggtcattgaggtcagagttcctagacaaaaaggtctcg gagcagctctgctgtcggagatcgcagggagttggtggattcaagccatggggcttcttt tatgagccaagtgcagagaaaggagcttttcatatgctccagcctgcagtcaggtactcc ctgtcctttctgggagtattctgtggctattcaggttccagggcaaaactatgggcacaa cttgctctccagagtgacataaaggaagtggttcagtgcccttgtgttatcatcgggagc catgtggatactccctgggccaagcagccgtcccttcagcaccttcacaaaagcagccgt ggaggatgggctctgcctgtgcaaggcctccctgtggaagctggtgtagacaactcacct tattatgccagtccctcctcccaccgacacggtgagaaggctgttaccagtaacatctta cagatgaggatgcagaagaggctcagatccctgtgtatatggcctgaagtcaatggtttt gaacttggagtccacatctgtttagcttcaaagcttgcggtcttttcactctgctatgct gtcctgtgggctggtgaggaactgtggaaagcagtggaagagaagaagggagagatgagg atgatggtatcaaagtcgagggcatgtggggactcacaaaaggaggatttagagtggccc aagggttcatga >gi568815597f:163226052_163455466|GENSCAN_predicted_peptide_7|89_aa MAAAVPVLPVRLRNSVKHRCAGALSQYEASIFWRWEGQDGGSKCLKRTFPLQKKGEELRE WAMNTSWGKAMTPVLFCSKAGEECLDDSR >gi568815597f:163226052_163455466|GENSCAN_predicted_CDS_7|270_bp atggcggcggctgtgccggtgctcccagtacgcctcaggaattccgtgaagcaccgctgt gcgggagcactcagtcagtatgaggccagcatcttctggagatgggaaggacaagatgga ggttcaaaatgtctgaagagaactttcccccttcagaaaaagggggaagaattgagagag tgggccatgaatacaagttggggcaaagcaatgactcctgtgctgttctgttctaaagct ggagaggagtgcttggatgacagcagataa >gi568815597f:163226052_163455466|GENSCAN_predicted_peptide_8|81_aa MNKTDSMEKEKLLLLLPENGFDNERMGNKCIGQSHRAGKLKPPMVVIKSELEQLAEPNTK PSVKMTRMYTGANGEREKETR >gi568815597f:163226052_163455466|GENSCAN_predicted_CDS_8|246_bp atgaacaagacagatagcatggagaaagagaagcttctcctgcttttacctgagaatggt tttgataatgagagaatgggaaacaaatgcataggccaaagtcacagagctgggaaactg aagccacccatggtggtcataaaatctgaattagagcaattggctgaaccaaatacaaaa ccttcagtcaagatgactagaatgtacacaggtgccaatggggagagggagaaggaaact cgctag