GENSCAN 1.0	Date run:  3-Nov-116	Time: 14:09:56

Sequence gi568815597f:103625744_103750469 : 124726 bp : 36.42% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.06 PlyA -    177    172    6                               1.05
 1.05 Term -  24655  24537  119  2  2  103   33   122 0.929   5.92
 1.04 Intr -  25336  25231  106  1  1   32   16   149 0.895   0.97
 1.03 Intr -  26808  26586  223  2  1   35   86   147 0.716   6.41
 1.02 Intr -  28279  27885  395  1  2    8   67   319 0.404  14.33
 1.01 Init -  28792  28595  198  1  0   64   55   120 0.311   5.25
 1.00 Prom -  29705  29666   40                             -10.65

 2.00 Prom +  29743  29782   40                              -5.25
 2.01 Init +  30588  30755  168  2  0   78   94   106 0.685   9.43
 2.02 Intr +  31101  31247  147  2  0   70   98    30 0.757   1.71
 2.03 Intr +  32051  32248  198  1  0   88   91   148 0.999  13.73
 2.04 Intr +  32697  32927  231  2  0   80   94   130 0.996   9.85
 2.05 Intr +  33667  33800  134  0  2   85   33   125 0.993   5.22
 2.06 Intr +  34617  34739  123  0  0   52   66    71 0.496   0.08
 2.07 Intr +  34834  34933  100  1  1   65  106    76 0.996   6.29
 2.08 Intr +  36914  37032  119  1  2   42  100   114 0.999   6.34
 2.09 Intr +  37143  37268  126  0  0   72  119   102 0.999  10.57
 2.10 Term +  38588  38777  190  2  1   88   38   143 0.998   5.24
 2.11 PlyA +  38868  38873    6                               1.05

 3.04 PlyA -  38951  38946    6                               1.05
 3.03 Term -  39855  39832   24  0  0  105   43     9 0.455  -4.65
 3.02 Intr -  42525  42328  198  0  0   78   91   192 0.708  17.13
 3.01 Init -  51162  51157    6  0  0   82   52     4 0.126  -3.01
 3.00 Prom -  53740  53701   40                              -5.75

 4.10 PlyA -  53904  53899    6                               1.05
 4.09 Term -  61895  61706  190  1  1   88   38   143 0.997   5.24
 4.08 Intr -  63340  63215  126  0  0   72  119   102 0.999  10.57
 4.07 Intr -  63569  63451  119  2  2   42  100   114 0.999   6.34
 4.06 Intr -  65650  65551  100  0  1   65  106    76 0.996   6.29
 4.05 Intr -  66817  66684  134  1  2   85   33   125 0.995   5.22
 4.04 Intr -  67787  67557  231  2  0   80   94   130 0.996   9.85
 4.03 Intr -  68433  68236  198  0  0   88   91   148 0.999  13.73
 4.02 Intr -  69383  69237  147  2  0   70   98    30 0.757   1.71
 4.01 Init -  69896  69729  168  2  0   78   94   106 0.679   9.43
 4.00 Prom -  70741  70702   40                              -5.25

 5.00 Prom +  70779  70818   40                             -10.65
 5.01 Init +  71692  71889  198  0  0   64   55   120 0.377   5.25
 5.02 Intr +  72205  72599  395  0  2    8   67   319 0.406  14.33
 5.03 Intr +  73676  73898  223  2  1   35   86   147 0.716   6.41
 5.04 Intr +  75148  75293  146  0  2   32   47   142 0.064   2.66
 5.05 Intr +  75372  75447   76  0  1   70   62    62 0.038   0.40
 5.06 Intr +  87980  88210  231  1  0   70   73   149 0.092   8.65
 5.07 Intr +  89012  89145  134  1  2   64   33   125 0.983   3.12
 5.08 Intr +  90176  90275  100  2  1   50  111    75 0.984   5.19
 5.09 Intr +  92248  92366  119  0  2   49  100   111 0.999   6.74
 5.10 Intr +  92478  92603  126  0  0   72  119    85 0.996   8.87
 5.11 Term +  93939  94128  190  0  1   79   38    96 0.882  -0.36
 5.12 PlyA +  96910  96915    6                               1.05

 6.07 PlyA -  97502  97497    6                               1.05
 6.06 Term - 118793 118675  119  0  2  103   33   122 0.899   5.92
 6.05 Intr - 119474 119369  106  2  1   32   16   149 0.861   0.97
 6.04 Intr - 120946 120724  223  0  1   35   86   158 0.835   7.51
 6.03 Intr - 122417 122023  395  2  2    8   67   319 0.449  14.33
 6.02 Intr - 123101 122733  369  2  0   40   55   205 0.389   6.78
 6.01 Intr - 123618 123538   81  0  0   55   68    74 0.497   1.02

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Intr +  75148  75253  106  0  1   32   16   149 0.884   0.97
S.002 Term +  75829  75947  119  2  2  103   33   122 0.917   5.92
S.003 Init +  87938  88210  273  1  0   68   73   144 0.893   7.92


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597f:103625744_103750469|GENSCAN_predicted_peptide_1|346_aa
MAPTVPSTPYPVGRPPSPEPTAPRPPRVDKNKSETAGKSTSLAARLTAQDGNSNALREQR
YTRTDEDPNEGPDMERLRGYREALIERLKKGAQKGTNVNKVSEVIQGKEESPAQFYQRPC
EAYCMYTPFDLESPENQPLINTALVIQSAEDIQRKLQKQARFAGMKTLQLLERANEVFVN
RDATSGQESRKEGERQARFKKSPTIFGEASVGDLQMFPAKDLGCILLQYVDDLLLGHSMA
VRCAKRTGALLRHLEDCGYKVPKKKAQICRQQHNAKQGPSVPRGIEASGAAHFEDLQVDF
TEMPKCRSDIVWIKDWNVAPLWPQWKGPQTINLTTPTAVNVEGIPA

>gi568815597f:103625744_103750469|GENSCAN_predicted_CDS_1|1041_bp
atggcaccaacagtgccctcaaccccttatccagtggggaggcccccttctcctgagccc
acagcccctagaccacccagagtagacaagaacaaaagtgaaactgcgggaaaatccact
tccctggcagcccgcttaacggcccaagacgggaattcaaatgccctgagagagcagcga
tatactaggacagatgaggatccaaatgaaggaccagatatggaaaggctaagagggtac
cgagaggcattaattgaaaggttgaaaaaaggggctcaaaagggtaccaatgtaaataaa
gtttctgaagtcatccaaggaaaggaggaaagcccagcccagttctatcaaagaccgtgt
gaggcctattgcatgtacactcctttcgatctggagagtcctgaaaatcagccgttgatt
aatacggccttagttattcagagtgcagaagatatccagagaaaattgcaaaaacaggct
aggtttgcaggaatgaaaaccttgcagttactggaaagagctaatgaagtatttgtaaat
agagatgcaacaagcggccaagaaagccgtaaggagggcgaacgccaggccaggttcaaa
aagtcccccaccatctttggggaggcctcggttggagacctccaaatgtttcctgctaaa
gacctaggttgcatcctgctccagtatgtagatgaccttctgctaggacactccatggca
gtcaggtgtgcaaaaaggacgggtgccctgcttcgacacctggaggactgtggatataaa
gtgcccaaaaagaaagctcagatctgcagacagcagcacaatgcgaagcaaggcccctct
gtacctcggggaatagaagcctctggagcagctcattttgaagatcttcaagtggacttc
acagaaatgcctaaatgtagaagtgacattgtgtggatcaaggactggaacgtggctccg
ctgtggccacagtggaaaggaccccagacaattaacctgaccactcccacagctgtcaat
gtagaaggaatcccagcctag

>gi568815597f:103625744_103750469|GENSCAN_predicted_peptide_2|511_aa
MKLFWLLFTIGFCWAQYSSNTQQGRTSIVHLFEWRWVDIALECERYLAPKGFGGVQVSPP
NENVAIHNPFRPWWERYQPVSYKLCTRSGNEDEFRNMVTRCNNVGVRIYVDAVINHMCGN
AVSAGTSSTCGSYFNPGSRDFPAVPYSGWDFNDGKCKTGSGDIENYNDATQVRDCRLSGL
LDLALGKDYVRSKIAEYMNHLIDIGVAGFRIDASKHMWPGDIKAILDKLHNLNSNWFPEG
SKPFIYQEVIDLGGEPIKSSDYFGNGRVTEFKYGAKLGTVIRKWNGEKMSYLKNWGEGWG
FMPSDRALVFVDNHDNQRGHGAGGASILTFWDARLYKMAVGFMLAHPYGFTRVMSSYRWP
RYFENGKDVNDWVGPPNDNGVTKEVTINPDTTCGNDWVCEHRWRQIRNMVNFRNVVDGQP
FTNWYDNGSNQVAFGRGNRGFIVFNNDDWTFSLTLQTGLPAGTYCDVISGDKINGNCTGI
KIYVSDDGKAHFSISNSAEDPFIAIHAESKL

>gi568815597f:103625744_103750469|GENSCAN_predicted_CDS_2|1536_bp
atgaagctcttttggttgcttttcaccattgggttctgctgggctcagtattcctcaaat
acacaacaaggacgaacatctattgttcatctgtttgaatggcgatgggttgatattgct
cttgaatgtgagcgatatttagctcccaagggatttggaggggttcaggtctctccacca
aatgaaaatgttgccattcacaaccctttcagaccttggtgggaaagataccaaccagtt
agctataaattatgcacaagatctggaaatgaagatgaatttagaaacatggtgactaga
tgcaacaatgttggggttcgtatttatgtggatgctgtaattaatcatatgtgtggtaat
gctgtgagtgcaggaacaagcagtacctgtggaagttacttcaaccctggaagtagggac
tttccagcagtcccatattctggatgggattttaatgatggtaaatgtaaaactggaagt
ggagatatcgagaactataatgatgctactcaggtcagagattgtcgtctgtctggtctt
ctcgatcttgcactggggaaggattatgtgcgttctaagattgccgaatatatgaaccat
ctcattgacattggtgttgcagggttcagaattgatgcttccaagcacatgtggcctgga
gacataaaggcaattttggacaaactgcataatctaaacagtaactggttcccggaaggt
agtaaacctttcatttaccaggaggtaattgatctgggtggtgagccaattaaaagcagt
gactactttggtaatggccgggtgacagaattcaagtatggtgcaaaactcggcacagtt
attcgcaagtggaatggagagaagatgtcttacttaaagaactggggagaaggttggggt
ttcatgccttctgacagagcgcttgtctttgtggataaccatgacaatcaacgaggacat
ggcgctggaggagcctctatacttaccttctgggatgctaggctgtacaaaatggcagtt
ggatttatgcttgctcatccttatggatttacacgagtaatgtcaagctaccgttggcca
agatattttgaaaatggaaaagatgttaatgattgggttgggccaccaaatgataatgga
gtaactaaagaagttactattaatccagacactacttgtggcaatgactgggtctgtgaa
catcgatggcgccaaataaggaacatggttaatttccgcaatgtagtggatggccagcct
tttacaaactggtatgataatgggagcaaccaagtggcttttgggagaggaaacagagga
ttcattgttttcaacaatgatgactggacattttctttaactttgcaaactggtcttcct
gctggcacatactgtgatgtcatttctggagataaaattaatggcaactgcacaggcatt
aaaatctacgtttctgatgatggcaaagctcatttttctattagtaactctgctgaagat
ccatttattgcaattcatgctgaatctaaattgtaa

>gi568815597f:103625744_103750469|GENSCAN_predicted_peptide_3|75_aa
MVVRIYVDAVINHMCGNAVSAGTSSTCGSYFNPGSRDFPAVPYSGWDFNDGKCKTGSGDI
ENYNDATQLYKLIRP

>gi568815597f:103625744_103750469|GENSCAN_predicted_CDS_3|228_bp
atggtggttcgtatttatgtggatgctgtaattaatcatatgtgtggtaacgctgtgagt
gcaggaacaagcagtacctgtggaagttacttcaaccctggaagtagggactttccagca
gtcccatattctggatgggatttcaatgatggtaaatgtaaaactggaagtggagatatc
gagaactacaatgatgctactcagctatacaagttgattaggccctag

>gi568815597f:103625744_103750469|GENSCAN_predicted_peptide_4|470_aa
MKLFWLLFTIGFCWAQYSSNTQQGRTSIVHLFEWRWVDIALECERYLAPKGFGGVQVSPP
NENVAIHNPFRPWWERYQPVSYKLCTRSGNEDEFRNMVTRCNNVGVRIYVDAVINHMCGN
AVSAGTSSTCGSYFNPGSRDFPAVPYSGWDFNDGKCKTGSGDIENYNDATQVRDCRLSGL
LDLALGKDYVRSKIAEYMNHLIDIGVAGFRIDASKHMWPGDIKAILDKLHNLNSNWFPEG
SKPFIYQEVIDLGGEPIKSSDYFGNGRVTEFKYGAKLGTVIRKWNGEKMSYLKLYKMAVG
FMLAHPYGFTRVMSSYRWPRYFENGKDVNDWVGPPNDNGVTKEVTINPDTTCGNDWVCEH
RWRQIRNMVNFRNVVDGQPFTNWYDNGSNQVAFGRGNRGFIVFNNDDWTFSLTLQTGLPA
GTYCDVISGDKINGNCTGIKIYVSDDGKAHFSISNSAEDPFIAIHAESKL

>gi568815597f:103625744_103750469|GENSCAN_predicted_CDS_4|1413_bp
atgaagctcttttggttgcttttcaccattgggttctgctgggctcagtattcctcaaat
acacaacaaggacgaacatctattgttcatctgtttgaatggcgatgggttgatattgct
cttgaatgtgagcgatatttagctcccaagggatttggaggggttcaggtctctccacca
aatgaaaatgttgccattcacaaccctttcagaccttggtgggaaagataccaaccagtt
agctataaattatgcacaagatctggaaatgaagatgaatttagaaacatggtgactaga
tgcaacaatgttggggttcgtatttatgtggatgctgtaattaatcatatgtgtggtaat
gctgtgagtgcaggaacaagcagtacctgtggaagttacttcaaccctggaagtagggac
tttccagcagtcccatattctggatgggattttaatgatggtaaatgtaaaactggaagt
ggagatatcgagaactataatgatgctactcaggtcagagattgtcgtctgtctggtctt
ctcgatcttgcactggggaaggattatgtgcgttctaagattgccgaatatatgaaccat
ctcattgacattggtgttgcagggttcagaattgatgcttccaagcacatgtggcctgga
gacataaaggcaattttggacaaactgcataatctaaacagtaactggttcccggaaggt
agtaaacctttcatttaccaggaggtaattgatctgggtggtgagccaattaaaagcagt
gactactttggtaatggccgggtgacagaattcaagtatggtgcaaaactcggcacagtt
attcgcaagtggaatggagagaagatgtcttacttaaagctgtacaaaatggcagttgga
tttatgcttgctcatccttatggatttacacgagtaatgtcaagctaccgttggccaaga
tattttgaaaatggaaaagatgttaatgattgggttgggccaccaaatgataatggagta
actaaagaagttactattaatccagacactacttgtggcaatgactgggtctgtgaacat
cgatggcgccaaataaggaacatggttaatttccgcaatgtagtggatggccagcctttt
acaaactggtatgataatgggagcaaccaagtggcttttgggagaggaaacagaggattc
attgttttcaacaatgatgactggacattttctttaactttgcaaactggtcttcctgct
ggcacatactgtgatgtcatttctggagataaaattaatggcaactgcacaggcattaaa
atctacgtttctgatgatggcaaagctcatttttctattagtaactctgctgaagatcca
tttattgcaattcatgctgaatctaaattgtaa

>gi568815597f:103625744_103750469|GENSCAN_predicted_peptide_5|645_aa
MAPTVPSTPYPVGRPPSPEPTAPRPPRVDKNKSETAGKSTSLAARLTAQDGNSNALREQR
YTRTDEDPNEGPDMERLRGYREALIERLKKGAQKGTNVNKVSEVIQGKEESPAQFYQRPC
EAYCMYTPFDLESPENQPLINTALVIQSAEDIQRKLQKQARFAGMKTLQLLERANEVFVN
RDATSGQESRKEGERQARFKKSPTIFGEASVGDLQMFPAKDLGCILLQYVDDLLLGHSMA
VRCAKRTGALLRHLEDCGYKVPKKKAQICRQQHNAKQGPSVPRGIEASGAAHFEDLQVDF
TEMPKCRSNKYLLVLVFTYSKFGLPLRIGSNNRPAFVADLIQKTAKVRDCRLTGLLDLAL
EKDYVRSKIAEYMNHLIDIGVAGFRLDASKLMWPGDIKAILDKLHNLNSNWFPAGSKPFI
YQEVIDLGGEPIKSSDYFGNGRVTEFKYGAKLGTVIRKWNGEKMSYLKLYKMAVGFMLAH
PYGFTRVMSSYRWPRQFQNGNDVNDWVGPPNNNGVIKEVTINPDTTCGNDCVCEHRWRQI
RNMVIFRNVVDGQPFTNWYDNGSNQVAFGRGNRGFIVFNNDDWSFSLTLQTGLPAGTYCD
VISGDKINGNCTGIKIYVSDDGKAHFSISNSAEDPFIAIHAESKL

>gi568815597f:103625744_103750469|GENSCAN_predicted_CDS_5|1938_bp
atggcaccaacagtgccctcaaccccttatccagtggggaggcccccttctcctgagccc
acagcccctagaccacccagagtagacaagaacaaaagtgaaactgcgggaaaatccact
tccctggcagcccgcttaacggcccaagacgggaattcaaatgccctgagagagcagcga
tatactaggacagatgaggatccaaatgaaggaccagatatggaaaggctaagagggtac
cgagaggcattaattgaaaggttgaaaaaaggggctcaaaagggtaccaatgtaaataaa
gtttctgaagtcatccaaggaaaggaggaaagcccagcccagttctatcaaagaccgtgt
gaggcctattgcatgtacactcctttcgatctggagagtcctgaaaatcagccgttgatt
aatacggccttagttattcagagtgcagaagatatccagagaaaattgcaaaaacaggct
aggtttgcaggaatgaaaaccttgcagttactggaaagagctaatgaagtatttgtaaat
agagatgcaacaagcggccaagaaagccgtaaggagggcgaacgccaggccaggttcaaa
aagtcccccaccatctttggggaggcctcggttggagacctccaaatgtttcctgctaaa
gacctaggttgcatcctgctccagtatgtagatgaccttctgctaggacactccatggca
gtcaggtgtgcaaaaaggacgggtgccctgcttcgacacctggaggactgtggatataaa
gtgcccaaaaagaaagctcagatctgcagacagcagcacaatgcgaagcaaggcccctct
gtacctcggggaatagaagcctctggagcagctcattttgaagatcttcaagtggacttc
acagaaatgcctaaatgtagaagtaacaagtatttactggttctagtgtttacttactct
aagtttggactgcctctacgaattggctcaaataataggccagcatttgttgctgacttg
atacagaagacggcaaaggtcagagattgtcgtctgactggtcttcttgatcttgcactg
gagaaggattacgtgcgttctaagattgccgaatatatgaaccatctcattgacattggt
gttgcagggttcagacttgatgcttccaagctcatgtggcctggagacataaaggcaatt
ttggacaaactgcataatctaaacagtaactggttccctgcaggaagtaaacctttcatt
taccaggaggtaattgatctgggtggtgagccaattaaaagcagtgactactttggtaat
ggccgggtgacagaattcaagtatggtgcaaaactcggcacagttattcgcaagtggaat
ggagagaagatgtcttacttaaagctgtacaaaatggcagttggatttatgcttgctcat
ccttacggatttacacgagtaatgtcaagctaccgttggccaagacagtttcaaaatgga
aacgatgttaatgattgggttgggccaccaaataataatggagtaattaaagaagttact
attaatccagacactacttgtggcaatgactgcgtctgtgaacatcgatggcgccaaata
aggaacatggttattttccgcaatgtagtggatggccagccttttacaaattggtatgat
aatgggagcaaccaagtggcttttgggagaggaaacagaggattcattgttttcaacaat
gatgactggtcattttctttaactttgcaaactggtcttcctgctggcacatactgtgat
gtcatttctggagataaaattaatggcaattgcacaggcattaaaatttacgtttctgat
gatggcaaagctcatttttctattagtaactctgctgaagatccatttattgcaattcat
gctgaatctaaattgtaa

>gi568815597f:103625744_103750469|GENSCAN_predicted_peptide_6|430_aa
CCVPLKGTEIVHLGSSDFETVAIRCSQRFLVTASFRSSTVVKGQAAAVVVAKGHLFQESS
RSTGQEKPAPKVLFDPELEDSRQEMAPTVPSTPYPVGRPPSPEPTAPRPPRVDKNKSETA
GKSTSLAARLTAQDGNSNALREQRYTRTDEDPNEGPDMERLRGYREALIERLKKGAQKGT
NVNKVSEVIQGKEESPAQFYQRPCEAYCMYTPFDLESPENQPLINTALVIQSAEDIQRKL
QKQARFAGMKTLQLLERANEVFVNRDATSGQESRKEGERQARFKKSPTIFREASVGDLQM
FPAKDLGCILLQYVDDLLLGHSMAVRCAKRTGALLRHLEDCGYKVPKKKAQICRQQHNAK
QGPSVPRGIEASGAAHFEDLQVDFTEMPKCRSDIVWIKDWNVAPLWPQWKGPQTINLTTP
TAVNVEGIPA

>gi568815597f:103625744_103750469|GENSCAN_predicted_CDS_6|1293_bp
tgctgtgtgcccttaaaagggacagaaattgtgcacttggggagctcggattttgagaca
gtagctatccgatgctcccagagattcctagttacagctagttttagatcctctacagtg
gtaaaaggacaggcagcagcagtagtagtagcaaagggacatttatttcaggaaagttct
cgctccaccggccaagagaagccagcacctaaagttctgtttgacccagagctcgaggac
tcaaggcaggagatggcaccaacagtgccctcaaccccttatccagtggggaggccccct
tctcctgagcccacagcccctagaccacccagagtagacaagaacaaaagtgaaactgcg
ggaaaatccacttccctggcagcccgcttaacggcccaagacgggaattcaaatgccctg
agagagcagcgatatactaggacagatgaggatccaaatgaaggaccagatatggaaagg
ctaagagggtaccgagaggcattaattgaaaggttgaaaaaaggggctcaaaagggtacc
aatgtaaataaagtttctgaagtcatccaaggaaaggaggaaagcccagcccagttctat
caaagaccgtgtgaggcctattgcatgtacactcctttcgatctggagagtcctgaaaat
cagccgttgattaatacggccttagttattcagagtgcagaagatatccagagaaaattg
caaaaacaggctaggtttgcaggaatgaaaaccttgcagttactggaaagagctaatgaa
gtatttgtaaatagagatgcaacaagcggccaagaaagccgtaaggagggcgaacgccag
gccaggttcaaaaagtcccccaccatctttcgggaggcctcggttggagacctccaaatg
tttcctgctaaagacctaggttgcatcctgctccagtatgtagatgaccttctgctagga
cactccatggcagtcaggtgtgcaaaaaggacgggtgccctgcttcgacacctggaggac
tgtggatataaagtgcccaaaaagaaagctcagatctgcagacagcagcacaatgcgaag
caaggcccctctgtacctcggggaatagaagcctctggagcagctcattttgaagatctt
caagtggacttcacagaaatgcctaaatgtagaagtgacattgtgtggatcaaggactgg
aacgtggctccgctgtggccacagtggaaaggaccccagacaattaacctgaccactccc
acagctgtcaatgtagaaggaatcccagcctag