GENSCAN 1.0	Date run:  4-Nov-116	Time: 20:37:33

Sequence gi568815596r:80062451_80263211 : 200761 bp : 40.25% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   9878   9988  111  1  0   86   32    89 0.069   2.76
 1.02 Term +  16457  16606  150  1  0   69   40   108 0.508   1.03
 1.03 PlyA +  16759  16764    6                               1.05

 2.04 PlyA -  17504  17499    6                               1.05
 2.03 Term -  30362  30272   91  1  1   42   47   160 0.958   3.51
 2.02 Intr -  30866  30783   84  1  0   93   75    31 0.513   0.32
 2.01 Init -  31632  31214  419  0  2   71   53   135 0.242   4.25
 2.00 Prom -  31686  31647   40                              -6.15

 3.02 PlyA -  31803  31798    6                               1.05
 3.01 Sngl -  33800  33150  651  2  0   69   44   314 0.798  21.02
 3.00 Prom -  34264  34225   40                              -6.15

 4.02 PlyA -  34433  34428    6                               1.05
 4.01 Sngl -  35676  35287  390  0  0   79   54   305 0.750  22.17
 4.00 Prom -  37804  37765   40                              -8.45

 5.00 Prom +  38512  38551   40                              -3.45
 5.01 Init +  43547  43588   42  1  0   68  110    -3 0.090   0.37
 5.02 Term +  45082  45255  174  0  0   85   54   140 0.337   7.08
 5.03 PlyA +  46606  46611    6                               1.05

 6.05 PlyA -  46686  46681    6                               1.05
 6.04 Term -  60641  60550   92  0  2   55   53   143 0.560   4.40
 6.03 Intr -  63717  63689   29  2  2  109   93    23 0.342   1.74
 6.02 Intr -  66723  66657   67  1  1  126   89    22 0.460   3.14
 6.01 Init -  76228  76081  148  1  1   65   79    72 0.171   4.30
 6.00 Prom -  77100  77061   40                              -7.45

 7.00 Prom +  78130  78169   40                              -7.85
 7.01 Init +  83653  83736   84  0  0   77   78    80 0.817   6.77
 7.02 Intr +  85818  85921  104  2  2   50   80   110 0.748   4.45
 7.03 Intr +  89335  89533  199  1  1   31   -7   155 0.510  -1.27
 7.04 Term +  90609  90740  132  2  0  119   49   144 0.830  10.71
 7.05 PlyA +  91999  92004    6                               1.05

 8.09 PlyA -  92485  92480    6                               1.05
 8.08 Term - 100699 100098  602  2  2    6   34   240 0.112   4.10
 8.07 Intr - 114513 114277  237  1  0   85   88   146 0.650  10.96
 8.06 Intr - 115151 114945  207  0  0   59  -34   181 0.270   1.13
 8.05 Intr - 116848 116491  358  1  1   67   81   269 0.967  18.00
 8.04 Intr - 117695 117235  461  0  2   67   36   315 0.805  16.18
 8.03 Intr - 135871 135796   76  1  1   55   93    40 0.008  -0.63
 8.02 Intr - 141375 141091  285  0  0  -24   39   230 0.068   3.51
 8.01 Init - 146208 146125   84  0  0   41   87    46 0.217   0.68
 8.00 Prom - 148248 148209   40                              -2.85

 9.02 PlyA - 149014 149009    6                               1.05
 9.01 Sngl - 151379 150486  894  2  0   49   42   323 0.870  19.68
 9.00 Prom - 159414 159375   40                              -2.65

10.03 PlyA - 160659 160654    6                               1.05
10.02 Term - 180510 180205  306  0  0  101   55   136 0.772   5.73
10.01 Init - 181556 181431  126  2  0   77   47   106 0.833   5.70
10.00 Prom - 183031 182992   40                              -5.75

11.03 PlyA - 183301 183296    6                               1.05
11.02 Term - 186680 186577  104  0  2   44   41   142 0.061   2.56
11.01 Init - 192725 192650   76  2  1   71   68    80 0.745   5.60
11.00 Prom - 194679 194640   40                              -2.65


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596r:80062451_80263211|GENSCAN_predicted_peptide_1|86_aa
YVRCQKFQALLWFCQFLGAQLSLLISVALKLGKGPSGVLEETGVLFDSSFERTAAMGDFL
IDAKKLCFALPLRAFTIESLLTLPVN

>gi568815596r:80062451_80263211|GENSCAN_predicted_CDS_1|261_bp
tatgtccgctgccaaaagttccaagccctgctctggttctgccagtttcttggtgctcaa
ctctctctcctgatttctgtagcacttaagcttggaaaagggccttctggggttttagaa
gaaacaggagtcttatttgattcctcctttgaaagaactgctgccatgggtgatttcctc
attgatgcaaagaaactatgctttgccctacctttgagagcatttacaatagaaagtcta
cttactcttccagtgaactga

>gi568815596r:80062451_80263211|GENSCAN_predicted_peptide_2|197_aa
MGKDFMSKTPKAMATKAKIEKWDLIKLKSFCTAKETTIRVNRQPTEWEKIFATYSSDKGL
ISRIYNELKQIYKKKTNNPIKKWVKDINRHFSKEDIYAAKKHMKKCSSSLAIREIQIKTT
MRYHLTPVRMAIIKKSGKNRDMDEAGNHHSQQTIARTKNQTPHVLTHREPLDGIEAVMAM
GAEEEDAFSSMRDLGSS

>gi568815596r:80062451_80263211|GENSCAN_predicted_CDS_2|594_bp
atgggcaaggacttcatgtctaaaacaccaaaagcaatggcaacaaaagccaaaattgaa
aaatgggatctaattaaactaaagagcttctgcacagcaaaagaaactaccatcagagtg
aacaggcaacctacagaatgggagaaaatttttgcaacctactcatctgacaaagggcta
atatccagaatctacaatgaactcaaacaaatttacaagaaaaaaacaaacaaccccatc
aaaaagtgggtgaaggatatcaacagacacttctcaaaagaagacatttatgcagccaaa
aaacacatgaaaaaatgctcatcatcactggccatcagggaaatacaaatcaaaaccaca
atgagataccatctcacaccagttagaatggcgatcattaaaaagtcaggaaaaaacagg
gacatggatgaagctggaaaccatcattctcagcaaactatcgcaaggacaaaaaaccaa
acacctcatgttctcactcacagggaacctctggatggaatagaagctgtcatggcaatg
ggagctgaagaagaagatgcattctcctcaatgagagaccttggcagcagctag

>gi568815596r:80062451_80263211|GENSCAN_predicted_peptide_3|216_aa
MKAEIKMFFETNENKDTTYQNLWDTFKAVCRGKFIALNAHKRKQERSKIDTLTSQLKELE
KQEQTHSKASRRQEITKIRAELKEIETQKTLQKINVSRSWFFEKINKINRSLARLIKKKR
EKNQIDAIKNDKGDITTDPTEIQTTIREYYKHLYANKLENLEEMDKFLDTYTLPRLNQEE
VESLNRPVTGSEIEATINSLPTKKSPGPDGFTAKFY

>gi568815596r:80062451_80263211|GENSCAN_predicted_CDS_3|651_bp
atgaaggcagaaataaagatgttctttgaaaccaatgagaacaaagacacaacataccag
aatctctgggacacattcaaagcagtgtgtagagggaaatttatagcactaaatgcccac
aagagaaagcaggaaagatctaaaattgacaccctaacatcacaattaaaagaactagag
aagcaagagcaaacacattcaaaagctagcagaaggcaagaaataactaagatcagagca
gaactgaaggaaatagagacacaaaaaacccttcaaaaaatcaatgtatccaggagctgg
ttttttgaaaagatcaacaaaattaatagatcgctagcaagactaataaagaagaaaaga
gagaagaatcaaattgacgcaataaaaaatgataaaggggatatcaccaccgatcccaca
gaaatacaaactaccatcagagaatactataaacacctctatgcaaataaactagaaaat
ctagaagaaatggataaattcctcgacacatacaccctcccaagactaaaccaggaagaa
gttgaatctctgaatagaccagtaacaggctctgaaattgaagcaacaattaatagctta
ccaaccaaaaaaagtccaggaccagacggattcacagccaaattctactag

>gi568815596r:80062451_80263211|GENSCAN_predicted_peptide_4|129_aa
MRKKQSRKTGNSKNQSASPPPKECSSSPAMEQSWMETNFDRLREEGFRRSNYSELKEEVR
TNGKEVKNLEKKLGAWLTRITNAEKYLKDLMELKTMARELRDECISLSRQCDQLEERVSA
MEDEMNEMK

>gi568815596r:80062451_80263211|GENSCAN_predicted_CDS_4|390_bp
atgaggaaaaaacagagcagaaaaactggaaactctaaaaatcagagtgcctctcctcct
ccaaaggaatgcagctcctcaccagcaatggaacaaagctggatggagactaactttgac
aggttgagagaagaaggtttcagaagatcgaactactccgagctaaaggaggaagttcga
accaatggcaaagaagttaaaaaccttgaaaaaaaattaggtgcatggctaactagaata
accaatgcagagaagtacttaaaggacctgatggagctgaaaaccatggcacgagaacta
cgtgacgaatgcataagcctcagtaggcaatgcgatcaactggaagaaagggtatcagcg
atggaagacgaaatgaatgaaatgaagtga

>gi568815596r:80062451_80263211|GENSCAN_predicted_peptide_5|71_aa
MKEDLTRGFYYLPQPFPSLNKILCLTILQVSGQPHSSWMPNRAQDSRSVVPNKGCHTGTL
PLLAEGRHPTG

>gi568815596r:80062451_80263211|GENSCAN_predicted_CDS_5|216_bp
atgaaggaggatttaacaagggggttttattacttgccacagccatttccatcacttaat
aaaattctctgcctcaccatccttcaagtgtctgggcaacctcattcttcttggatgccg
aacagagctcaggactcacggagtgtggtgcccaacaaaggctgtcacactggcactttg
cccttgctggcagagggccgtcaccccaccggatga

>gi568815596r:80062451_80263211|GENSCAN_predicted_peptide_6|111_aa
MKPEYELRQSSCSTCVLNLHAYHVPALCCDGYLGRCPQKAHDTCSQEAHNVRLASWSEAL
PNIMSTPIIIYRKKRGKTQKKVKDDRRLDELIPRGKEVVGPTPYHPQRQQK

>gi568815596r:80062451_80263211|GENSCAN_predicted_CDS_6|336_bp
atgaaaccagaatatgaactcaggcagtccagctgctcaacctgtgttcttaaccttcat
gcatatcatgtgccagccctgtgttgtgatgggtacttgggaagatgcccacaaaaagca
catgatacctgttctcaagaagctcacaatgttaggcttgcatcatggtctgaggctctc
ccaaacatcatgtctactcccatcatcatttacagaaaaaagaggggaaaaacacagaag
aaagtgaaagatgaccggagactggatgaacttatccccagaggaaaggaggtggtggga
cccacaccatatcaccctcagagacagcagaagtga

>gi568815596r:80062451_80263211|GENSCAN_predicted_peptide_7|172_aa
MQRSTEVLQWTALAVSSNSREPSLAAMEGVTKVASAAKTAEYREVGKHHVKDKELDIYKS
TVRVAMPDVWGPAAAASAASSAANPTLFILLLLPPTFLLPSPKLQMLPALQLCFPPAVLL
LHCHGHQARNTVVKFAAPSGAKFSIQVTGATESVATDACAGKGTSPLLQCPC

>gi568815596r:80062451_80263211|GENSCAN_predicted_CDS_7|519_bp
atgcagaggagcactgaggtgctccaatggacagccctagctgtctcttcaaacagcagg
gagccttcactggcagccatggagggggttacaaaagtagcatcagcagcaaagactgct
gagtacagggaagttgggaaacatcatgtgaaagacaaggaactggatatttacaagtca
acagtcagggttgccatgcctgatgtctggggtccagctgctgctgccagtgctgcctct
tctgctgccaaccccactcttttcatcctcctgctgcttccaccaacatttctgctgcca
tcgccaaaattacagatgctgccagcactgcagctttgcttcccccctgctgtcttgttg
ctgcattgccatgggcatcaggcaaggaacaccgtggtgaaatttgcagcaccatccggt
gccaaatttagcatccaggtcactggtgccacggaaagcgttgccactgatgcttgtgcc
gggaaaggcacctctcctctgcttcagtgtccatgctaa

>gi568815596r:80062451_80263211|GENSCAN_predicted_peptide_8|769_aa
MVREVSALNALCPETEMQNFCLPDHSHKRTSAKAVRKGNVELEPPHRVPTGAPPSGAVRR
GPPSSRNQSGNSTNSLHCAPGKAADTQNQPVKAARREAISCKATGVEVPKTIGTYHLHQH
DLDSHVPINLKEQRPQTRVRAEDTPDVTGDLQPFTRVTVHWGKGNDQNFRGLLDPGFELM
LIPRDTKHHYSSPIKVGSYVCQVINEVLAQVQLTVGPVSPQTHPVVTSPVPECIIGIDIL
NSWQNPHIGYLTGKMTASMEGKAKWKPLELPLPRKIVNQKQYCISGGIAEISAIIKDLKY
AKKTDGSWRMTVDYHKFNQVVTPTASAVPDVVSLLEQINTSLGNWYAATDSANAIPFHKA
HQKQSAFSCQDQQYTFSVLPQGYINSLALYHDLVHKDLDRFSLPQDIILVHYIDDITLIG
SITPVIAQWAHEKSGHGNRDGGYAWAQQHGLPLTKADLAMTTTECPICWQQRPTLSPQYG
NIPWVINQLLARIHGSRNQGMEMEASFLTITRRHNNDSIKLEVKIATWPLWAPPTSKSTG
NKGRKEVIGLAGVIDPDYQDKISLLLHSGGWASNKGEIPKDKDGKPKQFAFVNFKHEVSV
PYAMNLLNGIKLYGRPIKIQFRSGSSHASQDVSLPYPQYHVGNSSPTSTTPSRYERTRDN
MTSSAQIIQRSFSSPENFQRQAVMNSALRQMSYGGKFASSPLDQSGFSPSVQSHSHSFNQ
SSSSQWRQGTPSSQRKVRMNSHPYLADRHYSREQRYTDHGSDHHYRGKR

>gi568815596r:80062451_80263211|GENSCAN_predicted_CDS_8|2310_bp
atggtacgcgaggtctcagccctaaatgctctgtgccccgagactgagatgcagaatttc
tgcctgcctgatcactcccataagagaacctctgctaaggcagtgcggaagggaaatgtg
gagttggagcccccacacagagtccctactggggcaccacctagtggagctgtgagaaga
gggccaccatcctccagaaaccagagtggtaactccaccaacagcttgcactgtgcacct
ggaaaagctgcagacacccaaaaccagcctgtgaaagcagccaggagggaagcaatatcc
tgcaaagccacaggagtggaggtgccaaagactataggaacctaccacttgcatcagcat
gacctggattcccatgttcctataaatctgaaagagcaaagacctcaaacaagggtaaga
gcagaagacacccctgacgtaactggagatctccagccttttaccagggtaactgtgcac
tggggaaagggaaatgatcagaactttcggggactactggaccctggctttgagctgatg
ttgattccaagggacacaaaacatcattatagttctccaattaaagtggggtcttatgtt
tgtcaagtaattaatgaagttttagctcaggtccaacttacagtgggtccagtgagtccc
cagactcatcctgtggtcacttctccagtgccagaatgcataattggcatagacatactt
aacagctggcagaacccccacattggctacctgactggtaagatgacggctagtatggag
ggaaaggccaaatggaagccattagagctgcctctacctagaaagatagtaaatcaaaaa
caatattgcatctctggagggattgcagagatcagtgccatcatcaaggacttgaaatat
gcaaagaagacagatggatcttggagaatgacagtggattatcataagtttaaccaagtg
gtgactccaactgcatctgctgtaccagatgtggtttcattgcttgagcaaattaacaca
tctcttggtaactggtatgcagccactgattcggcaaatgccattccttttcataaggcc
caccagaagcaatctgccttcagctgtcaagaccagcaatataccttctctgtcctacct
caggggtacatcaactctctggcattgtatcatgatcttgttcacaaagatcttgatcgc
ttttcccttccacaagatatcatactggtccattacattgatgatattacgctgattgga
tccatcacccctgtcattgcccagtgggcccatgaaaaaagtggccatggtaacagagat
ggaggttatgcatgggctcagcaacacggacttccactcaccaaggctgacctggctatg
accaccactgagtgcccaatttgctggcagcagagaccaacactgagccctcaatatggc
aacattccttgggtaatcaaccagctacttgccaggattcatggttccaggaatcaaggg
atggaaatggaagcgtcatttctcaccatcaccagaagacacaacaacgattctattaaa
ctggaagttaagattgccacttggccactttgggctccccctacctctaagtcaacaggc
aacaaaggaagaaaggaagttatagggttggctggggtgattgacccagattatcaagat
aaaatcagtttactactccacagtggaggctgggccagtaataaaggtgaaattccaaaa
gataaggatggtaaaccaaagcagtttgcgtttgtgaatttcaaacatgaagtatctgtt
ccttatgcaatgaatctacttaatggaatcaaactttatggaaggcctatcaaaattcaa
tttagatcaggaagtagtcatgcctcgcaagatgtcagtttgccatatccccaatatcat
gttggaaattcaagccctacctccacaactcctagcaggtacgaaaggactagggataac
atgacttcatcagcacagataattcagagatctttctcttctccagaaaattttcagaga
caagcagtgatgaacagtgctttgagacaaatgtcatatggtggaaaatttgcttcttca
cctctggatcaatcaggattttcaccatcagttcaatcacacagtcatagttttaatcag
tcttcaagctcccagtggcgccaaggtacaccatcatcacagcgtaaagtcagaatgaat
tctcatccctacctagcagatagacattatagccgggaacagcgttacactgatcatggg
tctgaccatcattacagaggaaagagatga

>gi568815596r:80062451_80263211|GENSCAN_predicted_peptide_9|297_aa
MGDFNTPLSTLDRSTRQKVNKDTQELNSALHQADLIDIYRTLHPKSAEYTFFSAPHHTYS
KIDHTVGSKALLSKCKRTEIITNCLSDHSAIKLELRIKKLTQNCSTTWKLNNVLLNDYWV
HNEMKAEIKMFFETNKNKDTTYQNLWDTFKAVCRGKFIALNAHKRKQERSKIDTLTSQLK
ELEKQEQTHSKTSRRQEITKIRGEVKEIETQKTLQKINESSSWFFEKINKIDGPLARQIK
KKREKNQIDTIKNDKGDITTDPTEIQTTIREYYKHLCANKLENLEEMDKFLDTYTLP

>gi568815596r:80062451_80263211|GENSCAN_predicted_CDS_9|894_bp
atgggagactttaacaccccactgtcaacattagacagatcaacaagacagaaagttaac
aaggatacccaggaattgaactcagctctgcaccaagcagacctaatagacatctataga
actctccaccccaaatcagcagaatatacattcttttcagcaccacaccacacttattcc
aaaattgaccacacagttggaagtaaagcactcctcagcaaatgtaaaagaacagaaatt
ataacaaactgtctctcagaccacagtgcaatcaaattagaactcaggattaagaaactc
actcaaaactgctcaactacgtggaaactgaacaatgtgctcctgaatgactactgggta
cataatgaaatgaaggcagaaataaaaatgttctttgaaaccaataagaacaaagacaca
acataccagaatctctgggacacatttaaagcagtgtgtagagggaaatttatagcacta
aatgcccacaagagaaagcaggaaagatctaaaattgacaccctaacatcacaattaaaa
gaactagagaagcaagagcaaacacattcaaaaactagcagaaggcaagaaataactaag
atcagaggagaagtgaaggagatagagacacaaaaaacccttcaaaaaatcaatgaatcc
agtagctggttttttgaaaagatcaacaaaattgatgggccgctagcaagacaaataaag
aagaaaagagagaagaatcaaatagacacaataaaaaatgataaaggggatatcaccact
gatcccacagagatacaaactaccatcagagaatactataaacacctctgtgcaaataaa
ctagaaaatctagaagaaatggataaattcctcgacacatacaccctcccatga

>gi568815596r:80062451_80263211|GENSCAN_predicted_peptide_10|143_aa
MRPRLMQMALQAAALMSPSRNCSKSQPGCGGIGTLSQWEYKMKLFLALCCSLRLSPPVVL
VKTHSLDPGGSIAILLHLAGSLQNEENTPPRVTIKKREQTQAGRGTARARLLFSCPIWIR
EASGEMEPNSEWEMPLFELTLRQ

>gi568815596r:80062451_80263211|GENSCAN_predicted_CDS_10|432_bp
atgaggccacgtttgatgcagatggccctgcaggctgctgcattgatgtcccctagtaga
aactgcagcaaaagccagccaggatgtggaggaattgggactctcagtcagtgggaatat
aaaatgaaactgtttctggccctttgctgctccctccgcctctctcctccagtggtccta
gtgaaaacccatagcctggaccctggtggcagcatagctattctgctccatctagcagga
tccctgcagaatgaagaaaacacaccacccagagttaccatcaagaagagagaacagacc
caggctggcagaggaacagctcgggccagactgctgttcagctgccctatctggataagg
gaggcatctggggagatggagccaaactctgagtgggaaatgccattgtttgagttgaca
cttagacagtga

>gi568815596r:80062451_80263211|GENSCAN_predicted_peptide_11|59_aa
MKGLGNQFAQTQISGKTNIYRHRKAEIKACCGNETTSSPFLLEEPADDGGEKGTAGSFY

>gi568815596r:80062451_80263211|GENSCAN_predicted_CDS_11|180_bp
atgaaaggattaggaaatcaatttgctcaaacacagatcagtggaaagacgaacatctat
cgacacaggaaggctgaaataaaagcatgctgtggaaatgaaaccacatcatcacctttt
cttctggaagagcctgctgatgatggaggagagaagggcactgcaggctctttctactaa