GENSCAN 1.0	Date run:  7-Nov-116	Time: 21:23:13

Sequence gi568815596r:70153858_70354010 : 200153 bp : 43.89% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.07 Intr -   6930   6768  163  0  1   84  111   127 0.832  14.15
 1.06 Intr -  11335  11235  101  2  2   41   78    17 0.820  -4.17
 1.05 Intr -  11778  11671  108  1  0  109   92    27 0.943   5.46
 1.04 Intr -  15804  15700  105  1  0   60  115    56 0.941   5.69
 1.03 Intr -  21920  21816  105  0  0   70  110    27 0.892   3.29
 1.02 Intr -  25785  25675  111  1  0  102   99    13 0.916   4.15
 1.01 Init -  28128  27306  823  0  1   59   78   641 0.998  55.08
 1.00 Prom -  31881  31842   40                              -4.76

 2.00 Prom +  47170  47209   40                              -2.16
 2.01 Init +  48116  48346  231  1  0   60  110   198 0.515  15.78
 2.02 Intr +  48773  48913  141  1  0   54   76    56 0.308   1.55
 2.03 Intr +  49490  49666  177  1  0   16   32   158 0.745   3.12
 2.04 Term +  50354  50755  402  1  0   16   51   212 0.981   5.45
 2.05 PlyA +  51850  51855    6                               1.05

 3.07 PlyA -  52954  52949    6                               1.05
 3.06 Term -  65144  65124   21  2  0  114   36     2 0.017  -4.09
 3.05 Intr -  70772  70697   76  1  1   73   80    60 0.155   3.22
 3.04 Intr -  73965  73878   88  1  1   62   97    60 0.311   3.33
 3.03 Intr -  75461  75407   55  2  1   65   92     2 0.395  -3.15
 3.02 Intr -  76997  76899   99  2  0  115  121    55 0.871  11.81
 3.01 Init -  94530  94375  156  0  0   91   57    95 0.415   4.61
 3.00 Prom -  99214  99175   40                              -6.76

 4.00 Prom + 102505 102544   40                              -7.66
 4.01 Init + 104308 104419  112  0  1   95   74   243 0.998  21.97
 4.02 Intr + 105503 105709  207  0  0   94   71   189 0.981  16.85
 4.03 Intr + 107355 107529  175  1  1  126   76    89 0.988  10.50
 4.04 Intr + 121102 121313  212  1  2   85   94   323 0.999  31.16
 4.05 Intr + 121657 121809  153  2  0   69  115    73 0.771   8.14
 4.06 Term + 122877 123535  659  1  2   94   45   465 0.999  36.92
 4.07 PlyA + 123648 123653    6                               1.05

 5.05 PlyA - 125459 125454    6                               1.05
 5.04 Term - 127827 127777   51  0  0  106   36    61 0.584   0.13
 5.03 Intr - 134335 134211  125  2  2   83  103    61 0.770   7.40
 5.02 Intr - 135515 135493   23  1  2  122  103    28 0.129   4.89
 5.01 Init - 139792 139761   32  1  2   78  106     0 0.092   0.06
 5.00 Prom - 140712 140673   40                              -2.86

 6.04 PlyA - 142145 142140    6                               1.05
 6.03 Term - 143620 143432  189  1  0  117   42   222 0.999  17.95
 6.02 Intr - 147123 146983  141  0  0  131   94   181 0.996  23.55
 6.01 Init - 148154 148068   87  2  0  108   74   146 0.735  15.87
 6.00 Prom - 181646 181607   40                              -3.26


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl +  66609  66776  168  2  0   81   54   148 0.879   5.46
S.002 Term + 139375 139665  291  0  0   96   48   224 0.842  14.54


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596r:70153858_70354010|GENSCAN_predicted_peptide_1|506_aa
MEPNSLRTKVPAFLSDLGKATLRGIRKCPRCGTYNGTRGLSCKNKTCGTIFRYGARKQPS
VEAVKIITGSDLQVYSVRQRDRGPDYRCFVELGVSETTIQTVDGTIITQLSSGRCYVPSC
LKAATQGVVENQCQHIKLAVNCQAEATPLTLKSSVLNAMQASPETKQTIWQLATEPTGPL
VQRITKNILVVKCKASQKHSLGYLHTSFVQKVSGKSLPERRFFCSCQTLKSHKSNASKDE
TAQRCIHFFACICAFASDETLAQEFSDFLNFDSSGLKEIIVPQLGCHSESTVSACESTAS
KSKKRRKDEVSGAQMNSSLLPQDAVSSNLRKSGLKKPVVASSLKRQACGQLLDEAQVTLS
FQDWLASVTERIHQTMHYQFDGKPEPLVFHIPQSFFDALQQRISIGSAKKRLPNSTTAFV
RKDALPLGTFSKYTWHITNILQVKQILDTPEMPLEITRSFIQNRDGTYELFKCPKVEVES
IAETYGRIEKQPVLRPLELKTFLKVX

>gi568815596r:70153858_70354010|GENSCAN_predicted_CDS_1|1518_bp
atggaaccaaattctctgaggactaaagtcccagctttcttatctgatttggggaaggcc
acattgaggggaatcagaaagtgtccccgatgtggcacatacaatggaacccggggactg
agctgtaagaacaagacatgtggaaccatattccgctacggtgcacgcaagcagcctagt
gttgaagctgtcaaaatcattacaggctctgatcttcaggtctactcagtgcggcaaaga
gaccggggccctgattaccgatgctttgtggagctcggggtttcagagacaacaatccag
acagtggatgggacgatcatcactcagctgagctctggacggtgttatgtcccctcatgc
ctgaaagctgccactcaaggcgttgtggaaaaccagtgccagcacatcaagctggcggtg
aactgccaggcagaggccacccctctgaccctgaagagctcggtcctgaatgcaatgcag
gcctccccggaaaccaaacagaccatctggcagttggccacggaacccacaggtcctctg
gtgcagagaattactaaaaacatcttggtggtgaaatgcaaggcaagccagaagcacagt
ttggggtatttgcatacatcttttgtgcagaaagtcagtggcaaaagcttgcctgagcgc
cgcttcttctgctcctgtcagactctgaaatcgcacaagtcaaatgcctccaaggatgag
acagcccagagatgcattcatttctttgcttgcatctgtgcctttgccagtgatgagaca
ctggctcaggaattctcagacttcctaaattttgattccagcggtcttaaagagattatt
gtaccccagttaggttgccattcagaatcaacagtatctgcttgtgagtctactgcctct
aagtcaaagaagaggagaaaggatgaagtatctggtgcacagatgaacagttcactactg
cctcaagatgcagtgagcagtaatctaaggaaaagtggcctgaaaaagcctgtggttgct
tcctcgttaaaaaggcaggcctgtggtcagctgttagatgaggcacaagtgactttatcc
ttccaagactggctggccagtgtcacagaacgcatccatcaaaccatgcactatcagttt
gatggcaaaccagaaccattggtgttccacattcctcagtcattttttgatgccctgcaa
caaagaatatctataggaagtgcaaaaaaacggctccccaactccaccacagcttttgtt
cggaaagatgccttgccactgggaaccttttccaagtatacttggcatatcactaatatc
ctgcaagttaaacaaatcttagataccccagagatgcccttggaaatcacccgtagcttt
atccagaaccgagatgggacttatgagctatttaaatgccctaaagtggaagtagaaagc
atagcagaaacctacggtcgtatagaaaaacaaccagtgctgcgacccttggaactaaaa
acttttctcaaagttgnn

>gi568815596r:70153858_70354010|GENSCAN_predicted_peptide_2|316_aa
MWPQHGLRYLVAAVLSRWALVETWAEVDRSPMSMEKALKHLEAYNTEKEGAFASRVGWAF
LTMLWKVHAQSLRDTAQVSRQLAQGKGDHILTEWLMAAMWTGWNDARELSKTVSKWQSYA
ELVEDTRDQRPHVELAIHWYPTNVQQVLVLVGTDADYSLVYGKRDKFLGKAAYTDGYRGQ
SVKMTVDYQELNKVTAPLHAAVLSITDLMDHLTMELGQYHYAVDLANASLSDDIAPESQE
QFGFTWEGRQWTFTVLPQGYVHSPTICHGLVATDLATWKFPKGIRLFHYIDDIMLTSDSP
ADLEAVVPLLQQHLAA

>gi568815596r:70153858_70354010|GENSCAN_predicted_CDS_2|951_bp
atgtggccccaacatgggttgcggtacttggtggcagctgtgctgtccagatgggccctg
gtggaaacatgggcagaggtagacaggtcccccatgagcatggagaaggccctgaagcac
ctggaagcatacaacaccgagaaggagggtgcctttgccagcagagttggatgggcattt
ttgactatgctatggaaagtgcatgcccagtccctgcgggatacagcacaggtgagcagg
cagttggcacaagggaaaggtgaccatatcctgactgaatggctgatggcagccatgtgg
acagggtggaatgatgccagagaattatcaaaaactgtgagtaaatggcaatcatatgca
gagctggtggaggacaccagagatcagaggccacatgtggaattggcaatccactggtac
cccaccaatgtacagcaggtgttggtgctggtaggtactgatgcagattatagcctcgtc
tatgggaaacgggataagtttttaggcaaggctgcatacacagatggttatagaggccag
tcagtgaaaatgacagtggactatcaagaactaaataaagtaacagcccctttacatgca
gcagtcctgtctatcacggatttgatggaccacctgacgatggaattgggacagtaccat
tatgcagtggatttggctaatgcatccctttcagatgatatcgctccagagagccaggaa
cagtttggcttcacatgggaagggcgacaatggactttcacagtgttgccacagggctac
gtgcatagtcccaccatatgtcatggtctcgttgctacggatttagccacctggaaattt
ccaaaggggatccgcctattccattacattgatgatattatgttaacctctgattctcct
gcagatttagaagctgtggtgcccctcttgcaacaacatttggcagcatga

>gi568815596r:70153858_70354010|GENSCAN_predicted_peptide_3|164_aa
MREAGWWSSRREGLGPAPLPAYCSPWTPRYRGFCFLSMHLDAYNQDPICEDETAGNDPYC
FVEFHEHRHAAAALAAMNGRKIMGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTE
DIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWSFSAFQ

>gi568815596r:70153858_70354010|GENSCAN_predicted_CDS_3|495_bp
atgagggaggcgggatggtggtcgtcccggagggaaggcctcggccctgcgccgctccca
gcctattgttctccgtggacaccgcgatatcgtggtttttgtttccttagcatgcacctg
gatgcttacaaccaagacccaatctgtgaggacgagacagctggaaatgatccctattgt
tttgtggagtttcatgagcatcgtcatgcagctgcagcattagctgctatgaatggacgg
aagataatgggtaaggaagtcaaagtgaattgggcaacaacccctagcagtcaaaagaaa
gatacaagcaatcatttccatgtctttgttggtgatctcagcccagaaattacaactgaa
gatataaaagctgcttttgcaccatttggaagaatatcagatgcccgagtggtaaaagac
atggcaacaggaaagtctaagggatatggctttgtctcctttttcaacaaatggtctttc
tccgcatttcaataa

>gi568815596r:70153858_70354010|GENSCAN_predicted_peptide_4|505_aa
MGRVVAELVSSLLGLWLLLCSCGCPEGAELRAPPDKIAIIGAGIGGTSAAYYLRQKFGKD
VKIDLFEREEVGGRLATMMVQGQEYEAGGSVIHPLNLHMKRFVKDLGLSAVQASGGLLGI
YNGETLVFEESNWFIINVIKLVWRYGFQSLRMHMWVEDVLDKFMRIYRYQSHDYAFSSVE
KLLHALGGDDFLGMLNRTLLETLQKAGFSEKFLNEMIAPVMRVNYGQSTDINAFVGAVSL
SCSDSGLWAVEGGNKLVCSGLLQASKSNLISGSVMYIEEKTKTKYTGNPTKMYEVVYQIG
TETRSDFYDIVLVATPLNRKMSNITFLNFDPPIEEFHQYYQHIVTTLVKGELNTSIFSSR
PIDKFGLNTVLTTDNSDLFINSIGIVPSVREKEDPEPSTDGTYVWKIFSQETLTKAQILK
LFLSYDYAVKKPWLAYPHYKPPEKCPSIILHDRLYYLNGIECAASAMEMSAIAAHNAALL
AYHRWNGHTDMIDQDGLYEKLKTEL

>gi568815596r:70153858_70354010|GENSCAN_predicted_CDS_4|1518_bp
atggggcgcgtcgtcgcggagctcgtctcctcgctgctggggttgtggctgttgctgtgc
agctgcggatgccccgagggcgccgagctgcgtgctccgccagataaaatcgcgattatt
ggagccggaattggtggcacttcagcagcctattacctgcggcagaaatttgggaaagat
gtgaagatagacctgtttgaaagagaagaggtcgggggccgcctggctaccatgatggtg
caggggcaagaatacgaggcaggaggttctgtcatccatcctttaaatctgcacatgaaa
cgttttgtcaaagacctgggtctctctgctgttcaggcctctggtggcctactggggata
tataatggagagactctggtatttgaggagagcaactggttcataattaacgtgattaaa
ttagtttggcgctatggatttcaatccctccgtatgcacatgtgggtagaggacgtgtta
gacaagttcatgaggatctaccgctaccagtctcatgactatgccttcagtagtgtcgaa
aaattacttcatgctctaggaggagatgacttccttggaatgcttaatcgaacacttctt
gaaaccttgcaaaaggccggcttttctgagaagttcctcaatgaaatgattgctcctgtt
atgagggtcaattatggccaaagcacggacatcaatgcctttgtgggggcggtgtcactg
tcctgttctgattctggcctttgggcagtagaaggtggcaataaacttgtttgctcaggg
cttctgcaggcatccaaaagcaatcttatatctggctcagtaatgtacatcgaggagaaa
acaaagaccaagtacacaggaaatccaacaaagatgtatgaagtggtctaccaaattgga
actgagactcgttcagacttctatgacatcgtcttggtggccactccgttgaatcgaaaa
atgtcgaatattacttttctcaactttgatcctccaattgaggaattccatcaatattat
caacatatagtgacaactttagttaagggggaattgaatacatctatctttagctctaga
cccatagataaatttggccttaatacagttttaaccactgataattcagatttgttcatt
aacagtattgggattgtgccctctgtgagagaaaaggaagatcctgagccatcaacagat
ggaacatatgtttggaagatcttttcccaagaaactcttactaaagcacaaattttaaag
ctctttctgtcctatgattatgctgtgaagaagccatggcttgcatatcctcactataag
cccccggagaaatgcccctctatcattctccatgatcgactttattacctcaatggcata
gagtgtgcagcaagtgccatggagatgagtgccattgcagcccacaacgctgcactcctt
gcctatcaccgctggaacgggcacacagacatgattgatcaggatggcttatatgagaaa
cttaaaactgaactatga

>gi568815596r:70153858_70354010|GENSCAN_predicted_peptide_5|76_aa
MSKAHPPELKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVEMATSGQQNNIGMV
VIRGNSIIMLEALERV

>gi568815596r:70153858_70354010|GENSCAN_predicted_CDS_5|231_bp
atgagcaaagctcaccctcccgagttgaaaaaatttatggacaagaagttatcattgaaa
ttaaatggtggcagacatgtccaaggaatattgcggggatttgatccctttatgaacctt
gtgatagatgaatgtgtggagatggcgactagtggacaacagaacaatattggaatggtg
gtaatacgaggaaatagtatcatcatgttagaagccttggaacgagtataa

>gi568815596r:70153858_70354010|GENSCAN_predicted_peptide_6|138_aa
MAELQQLRVQEAVESMVKSLERENIRKMQGLMFRCSASCCEDSQASMKQVHQCIERCHVP
LAQAQALVTSELEKFQDRLARCTMHCNDKAKDSIDAGSKELQVKQQLDSCVTKCVDDHMH
LIPTMTKKMKEALLSIGK

>gi568815596r:70153858_70354010|GENSCAN_predicted_CDS_6|417_bp
atggctgagctgcagcagctccgggtgcaggaggcggtggagtccatggtgaagagtctg
gaaagagagaacatccggaagatgcagggtctcatgttccggtgcagcgccagctgttgt
gaggacagccaggcctccatgaagcaggtgcaccagtgcatcgagcgctgccatgtgcct
ctggctcaagcccaggctttggtcaccagtgagctggagaagttccaggaccgcctggcc
cggtgcaccatgcattgcaacgacaaagccaaagattcaatagatgctgggagtaaggag
cttcaggtgaagcagcagctggacagttgtgtgaccaagtgtgtggatgaccacatgcac
ctcatcccaactatgaccaagaagatgaaggaggctctcttatcaattggaaaataa