GENSCAN 1.0	Date run:  3-Nov-116	Time: 23:33:41

Sequence gi568815596r:128418791_128619177 : 200387 bp : 48.79% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.16 Intr -   2770   2699   72  2  0   98   96    45 0.022   5.68
 1.15 Intr -  16119  15974  146  2  2   87   82   102 0.752   9.43
 1.14 Intr -  17801  17668  134  2  2   64   73    76 0.930   3.14
 1.13 Intr -  21759  21468  292  2  1  128   85    38 0.192   4.64
 1.12 Intr -  27856  27726  131  1  2  127    8   105 0.203   5.89
 1.11 Intr -  37294  37072  223  0  1   48   86   103 0.093   4.23
 1.10 Intr -  67886  67756  131  2  2   30   89    70 0.021   0.79
 1.09 Intr -  68775  68598  178  2  1   62   90    36 0.071   1.12
 1.08 Intr -  74432  74293  140  2  2   99   70    24 0.056   0.96
 1.07 Intr -  75843  75688  156  0  0   74   56   102 0.455   5.81
 1.06 Intr -  76334  76238   97  1  1   40   60    58 0.563  -1.79
 1.05 Intr -  79358  79244  115  0  1  104   97    63 0.950   8.31
 1.04 Intr -  84943  84719  225  2  0   60   77    90 0.248   3.06
 1.03 Intr -  86552  86447  106  2  1   69   -8    96 0.220  -2.11
 1.02 Intr -  92195  92122   74  0  2   62  108    69 0.640   5.43
 1.01 Init -  96158  95789  370  2  1   26  100   187 0.545   9.35
 1.00 Prom -  97568  97529   40                              -8.46

 2.10 PlyA -  97721  97716    6                               1.05
 2.09 Term - 100478 100103  376  1  1   55   55   231 0.769  10.71
 2.08 Intr - 101572 101520   53  1  2   56   75    14 0.142  -5.39
 2.07 Intr - 102240 102044  197  1  2   39   61   129 0.190   4.43
 2.06 Intr - 109765 109502  264  2  0   75   40   193 0.566  10.68
 2.05 Intr - 124286 124155  132  0  0   82   69    81 0.249   6.22
 2.04 Intr - 125720 125691   30  0  0   84  110     8 0.437   0.70
 2.03 Intr - 145766 145572  195  0  0   74   97    46 0.016   3.49
 2.02 Intr - 146434 146297  138  2  0   55   68    85 0.017   3.64
 2.01 Init - 162337 162265   73  1  1  103   63    43 0.113   4.53
 2.00 Prom - 166652 166613   40                              -3.76

 3.06 PlyA - 169357 169352    6                               1.05
 3.05 Term - 180179 179540  640  1  1   -1   45  1015 0.604  81.98
 3.04 Intr - 180877 180664  214  2  1   19   11    86 0.285  -8.23
 3.03 Intr - 182290 182179  112  1  1   81   89    43 0.539   3.65
 3.02 Intr - 186806 186696  111  2  0   18  108   101 0.662   5.68
 3.01 Init - 187817 187419  399  2  0   74   33   246 0.969  14.37

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term + 146515 146681  167  2  2   85   53   106 0.922   4.88


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596r:128418791_128619177|GENSCAN_predicted_peptide_1|864_aa
MLGCLGWHRLWEEQTWLGMGREQESGVQECSICDTCWTSLLSSQVDSQVTRPRAQGEVEA
EGQNLGSIDNYVDWNTRRLTAWRHLKQITKSQAQLFNAATGIGEAAPPGLGSSGSLAGLR
AQQDEPGPTYTIAKSPLSQRILEEPQMQTSTDPQRGEVTGSVTQLFSIQAETQPYSVYTA
HRQNIFTGKLEMFFIHQNGRVLHREHHCHGPGIRPAFWEFSLKPNLQYAKELAAPAVFVS
KVTSGHSFAGCWGPQVSCAGYVGPHQAGVTGCTGQDCSLPALQGKTGPMWVLAPDLRAQS
FKATFASFTIWSAPMGPGMGTPFLTRYRQTDRLSPDINKQKQRSPLVPAERMRVWNNGND
LHYRHLLPAPLQTHSIIPILHALLPCRVRARPSGSCQRKFLRQRTRSGQEQGGRCGRAHA
PAGSARHRHCEEPYWNPQVLDDRQKLRGATPPAVLFMLTFMEGLLCTRHLAKHLPAIISF
NLLNNLERGRLRLCHRHDPPPTPPPATRLTCKQCPRILQHRRSTFLIQQQRCICHTRSFS
GYAQVIAIGHICPTEFQQKYPVGVVDLETGMWAELKLLSWGRAAIAVWVCLRRVVGEDTA
HQQVKKGTALSGNCHQSLREIELLFRGNCWVLAEAPMPARGWKQQISKRTSAAPQGFCAH
GHLGGARSLLTGAVLLCPASLKPLLAALHCLEADQESPLHSASEFAPLIQGRTTVAWNKA
CREPLTVARGFDFEFMGLLQLGDFSLQSAHIPGLMGMPLKPSSNEALAVILQMLHPQYFT
EQVFGVQLPCMAKEESTGTKAMVFNGDSSGPTSPDPLTKFTWGLGNCARDKLPKEVTEKE
HKPPMGRSYHLAQCPMPFASILPX

>gi568815596r:128418791_128619177|GENSCAN_predicted_CDS_1|2592_bp
atgttggggtgcctgggctggcaccggctgtgggaggagcagacgtggctgggcatgggc
agggagcaggagtcaggtgttcaggaatgttccatttgtgatacctgctggacatccctg
ctgagctctcaagtggacagtcaggtaaccaggccgagggcccagggagaggtcgaggct
gaagggcagaacctgggaagcatcgataattacgtggactggaatacaaggagactgact
gcctggcggcacctcaaacaaataacaaaatcacaggcacagctcttcaacgcggccaca
ggcatcggagaagcagctcccccgggactgggcagcagtgggtccctagctggtctgagg
gcccagcaagatgaaccaggcccaacatacaccattgccaagagtcctctcagccagaga
attcttgaagagccccagatgcaaacgagcacagatccccagagaggtgaagtgacaggc
tcggtcacccagctgttcagcatccaagctgagacacaaccgtattctgtctacacagcc
caccgccagaacatttttacaggaaaacttgaaatgtttttcatccatcagaatggcagg
gtgttgcacagggagcaccattgccatgggcctggtatccgccccgctttctgggagttt
agtcttaaacctaatctccagtacgccaaggagctggcggctccagctgtgtttgtgagc
aaggtcacctcgggtcacagctttgcaggctgttggggaccacaggtgtcgtgtgcaggg
tacgtgggacctcaccaagcaggagtcaccggatgcactggacaggactgcagcctccca
gcattgcaaggcaagactggaccaatgtgggtgctggcccctgacctcagagcacagtca
ttcaaagcaacctttgcctccttcaccatctggtcagcaccaatgggcccagggatgggg
acaccatttctcacccgctatcggcagacagacaggctaagcccagacatcaacaagcaa
aagcagcgaagtccacttgtgcctgctgaacggatgcgggtgtggaataatggtaatgac
ctccattacagacatctgctgcctgcacctctgcagacccatagcatcatccccatttta
catgctttattgccctgccgcgtgcgggccagaccctccgggagctgccagcgcaaattc
cttcggcagaggacccgctctgggcaggagcagggtggacggtgtgggcgcgcccacgcc
ccggcgggcagtgccaggcatcggcattgtgaggagccatactggaacccccaggtcctt
gatgacagacagaagctgagaggagccactccaccagctgttttgtttatgctcacattt
atggagggcttgctctgcactagacaccttgctaagcacctcccagctatcatctcattt
aatcttctcaacaacctggagagggggagactaaggctatgtcaccggcatgaccccccc
cccaccccgcccccggccacgcggctgacgtgcaagcagtgcccccgtatccttcagcac
aggagaagcactttcctcattcagcagcagcggtgcatctgccatacacggtcattctca
gggtatgctcaagttattgctatcgggcacatctgccctacagaattccagcagaaatac
ccagtgggagtggtggatctggaaacaggaatgtgggcagagctgaagctgctctcctgg
gggagggctgctattgctgtgtgggtgtgcctgagaagagtagtaggggaggacacagcc
caccagcaggtcaagaaggggacagccctttctgggaactgccaccaaagcctcagggaa
attgagcttctcttccggggaaactgctgggtgctggctgaggcacccatgccggcccga
gggtggaagcagcagatctccaagaggacttccgcagctccccaaggattctgtgcccat
ggccatctgggtggggcccgctccttgctcactggggccgtcctcctatgccctgcctcc
ctgaagcctctgcttgctgcgctgcactgtcttgaggccgaccaggagtctcctctgcac
agtgcctctgagtttgctcccttgatccagggcaggaccactgtggcttggaacaaggct
tgcagggagccactgacagttgctaggggcttcgattttgaattcatggggctactccag
cttggggatttctcactgcaatcagcccacatcccaggactcatggggatgcccttgaaa
cccagcagcaatgaggcactagcagtgatactgcagatgctgcacccccaatacttcact
gaacaagtatttggggtgcagctgccatgtatggccaaggaagagagtactggaacaaag
gcgatggtgttcaatggagatagttcaggacccacttcccctgatcctctcaccaagttc
acttggggcctgggaaattgtgcaagagacaagctaccaaaggaggtcactgaaaaagaa
cataagccccccatgggcaggagttaccatcttgcccagtgccccatgcccttcgccagc
atactgccagnn

>gi568815596r:128418791_128619177|GENSCAN_predicted_peptide_2|485_aa
MPHYSTMPGAVGIGTKACIMACVRDPYTRTKLPNSQSSSVLRLAQCSHPSHHQCKFNHSS
KREDAKASQPGTKTFMKTSRDHDCGTSSIHCKKGLSDHRKEPSMQPPLGSQTQVSWPWEK
LHPVMVMFKAYMDPEEQGSQTFYPSEDTGENAPTKKQAGPGFRTQETLHGRNIKGTSRTK
DKEDPTGQPYLSLSQSVLLQKQAPGEDSSGGSLFERCKDPSRREVEEDRKEKAGKMEDSV
IPGVLEQAGTCQQELTVEASPPSSTFSDVTRVAEIGLVIRSPAARSPGLETPTCLLFVIA
AIAAVFVDSAIPRLTQHRPQDGSFPYTILDPPLYLPGQCAPPQPLLGVKIPSSPVSRCLH
SPYLQCARRVHGERLRRPTSGPRHRGIGTAKMSASLVRATVQAVSKRKLQPTRAALTLTP
SAVNKIKQLLKDKPEHVGVKVGVRTRGCNGLSYTLEYTKTKGDSEEEVIQDGVRVLIEKK
AQLTL

>gi568815596r:128418791_128619177|GENSCAN_predicted_CDS_2|1458_bp
atgccccactacagcactatgcctggagcagttggaattggcaccaaggcttgcattatg
gcttgtgttagggatccctacacccgtaccaaacttccaaacagccagagcagcagtgtg
ctgcgtcttgcacaatgcagccatccctcacaccatcagtgtaaattcaatcattcctct
aaaagggaagatgcaaaggccagtcaaccaggaaccaagactttcatgaaaacaagcagg
gaccatgactgtggaaccagtagcatacattgcaagaagggccttagcgatcacagaaag
gagccctccatgcagccacctcttggttctcagacccaggtgtcctggccctgggagaaa
ctgcatccagtcatggttatgttcaaggcatatatggatcctgaagaacagggcagccag
accttttacccctcagaagatactggagaaaatgcgccaaccaagaaacaggcaggccca
ggattcaggacacaggagacccttcacgggagaaatataaagggaacctccaggaccaag
gacaaggaagaccccacaggacaaccctacctttcactgtctcagagcgtgctccttcag
aagcaggccccaggcgaggattcaagtggaggtagtttatttgagaggtgcaaggatccc
agcaggagggaggtagaggaagacaggaaagagaaggcaggaaagatggaggacagcgtg
atccctggagtgctggagcaggcaggcacctgccagcaagagctgacggtggaggcatct
cctcccagctccaccttcagtgacgtcacaagagtggctgaaattggccttgtcatccgg
tctccggcagccaggtccccaggcctggagacgcccacttgcctcctgtttgtcatcgct
gctattgccgctgtttttgtagacagtgctatccccagattgactcagcacagaccacag
gacgggagtttcccgtacaccatccttgaccctcccctgtacctgccaggccagtgtgcc
cctcctcagcctctgcttggcgtgaagattccatcttctcctgtgtcccgatgtctgcac
agcccctatctccaatgcgcccgccgtgtccatggagagaggctgaggcggccgacctcc
ggcccgaggcaccggggcatcgggacggcgaagatgtcggcttccttagtccgggcaact
gtccaggctgtgagcaagaggaagctgcagcccacccgggcagccctcaccctgacacct
tcagcagtaaacaagataaaacaacttcttaaagataagcctgagcatgtaggtgtaaaa
gttggtgtccgaaccaggggctgtaatggcctttcttatactctagaatatacaaagaca
aaaggagattctgaagaagaagttattcaagatggagtcagagtgctcatcgaaaagaaa
gcacagctaacactttga

>gi568815596r:128418791_128619177|GENSCAN_predicted_peptide_3|491_aa
MEGAVKNQQLSTPEGVHTHQESLATPEGMHTHQESLATPEGMHTHQESLATPEGVHTHQE
SLATPESVHTHQESHSTPEGMHTHQESLATPEGVHTHQESHSTPEGMHTHQESLATLARG
PSPHSLEGPMGPDHSWRRGSGAHILNSSQGTLTPMDTCTWHNRTIATIHQACACVHSHER
LCILTDMCPCASSYTPYTLKLRVDNFADQNTAAVQQQKHRQQEFPRNKTCFQPAIYKHPW
VHMHLMFTMTLNPGDACTDRQKHSAIYWLLVNLGLICYADGDGDNNSDGDDDGDDHAYGD
GDNDSDGDGDDSDGGDDNDYGDDNDSDGDCDDSDGRDDNDYGDGDNDSDGDGDDSDGGDD
NDYGDDNDSDGDCDDSDGGDDNDYGDGDNDSDGDGDDSDGGDDNDYGDGDNDSDGDGDDS
DGGDNNYGDGDNDSDGDGGDSDGRDDNDNGDDDNDSDGDGDDSNGGDDNDYGDGNNDSDG
DGDVMMVMMMG

>gi568815596r:128418791_128619177|GENSCAN_predicted_CDS_3|1476_bp
atggagggagctgtcaagaaccagcagctttccacacctgagggcgtgcacactcaccag
gaaagcctggccacacctgagggcatgcacactcaccaggaaagcctggccacacctgag
ggcatgcacactcaccaggaaagcctggccacacctgagggcgtgcacactcaccaggaa
agcctggccacacctgagagcgtgcacactcaccaggaaagccattccacacctgagggc
atgcacactcaccaggaaagcctggccacacctgagggcgtgcacactcaccaggaaagc
cattccacacctgaaggcatgcacactcaccaggaaagcctggctacactcgccagaggg
cccagcccccattccttggaagggcctatggggcctgaccattcctggagaaggggcagc
ggtgcacacatcctcaacagcagccaggggacactgaccccgatggacacctgcacctgg
cacaaccgtacaatcgccaccatccaccaagcatgtgcatgtgtgcattctcatgagcgt
ctgtgcatcctcacagacatgtgcccatgtgcatcttcatacaccccatacacactaaag
ttgcgtgtggacaactttgcagaccagaacacagctgctgttcaacaacaaaagcatagg
cagcaagaatttccacgtaataagacctgcttccagccagcaatttacaagcatccctgg
gtgcacatgcacttaatgttcacaatgaccctcaatcccggagatgcctgcactgacagg
cagaagcactctgccatttactggctcttggtcaacttgggcctaatttgttatgctgat
ggtgatggtgacaataatagtgatggtgatgatgatggtgatgaccatgcttatggagat
ggtgataatgacagtgatggtgatggtgatgatagtgatggtggtgatgataatgattat
ggagatgataatgacagtgatggtgattgtgatgatagtgatggtcgtgatgataacgat
tatggagatggtgataatgacagtgatggtgatggtgatgatagtgatggtggtgatgat
aatgattatggagatgataatgacagtgatggtgattgtgatgatagtgatggtggtgat
gataatgattatggagatggtgataatgacagtgatggtgatggtgatgatagtgatggt
ggtgatgataatgattatggagatggtgataatgacagtgatggtgatggtgatgatagt
gatggtggtgataacaattatggagatggtgataatgacagtgatggtgatggtggtgat
agtgatggtcgtgatgataatgataatggagatgatgataatgacagtgatggtgatggt
gatgatagcaatggtggtgatgataatgattatggagatggtaataatgacagtgatggt
gatggtgatgtgatgatggtgatgatgatgggatga