GENSCAN 1.0	Date run:  5-Nov-116	Time: 01:31:06

Sequence gi568815596r:126457433_126658163 : 200731 bp : 39.63% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.03 PlyA -    251    246    6                               1.05
 1.02 Term -   3952   3690  263  2  2    8   37   230 0.213   4.60
 1.01 Init -  10071   9627  445  0  1   90   53   177 0.219  10.95
 1.00 Prom -  11264  11225   40                              -5.05

 2.00 Prom +  16672  16711   40                              -5.85
 2.01 Sngl +  25195  25605  411  0  0   45   47   361 0.997  23.74
 2.02 PlyA +  26480  26485    6                               1.05

 3.00 Prom +  31453  31492   40                              -5.85
 3.01 Init +  34185  34259   75  2  0   63   98    66 0.771   6.24
 3.02 Intr +  53259  53362  104  2  2  111   56    85 0.459   5.65
 3.03 Intr +  54389  54493  105  2  0   93  101    17 0.213   1.91
 3.04 Term +  55867  56029  163  1  1   86   36    99 0.125   0.93
 3.05 PlyA +  56279  56284    6                               1.05

 4.07 PlyA -  56828  56823    6                               1.05
 4.06 Term -  60075  59968  108  0  0  119   54    59 0.954   3.13
 4.05 Intr -  61231  61136   96  1  0  134   94    -6 0.898   3.89
 4.04 Intr -  61737  61627  111  0  0   77   30    87 0.492   1.46
 4.03 Intr -  62009  61881  129  2  0   66   91    36 0.470   1.67
 4.02 Intr -  62845  62743  103  0  1   34   97    73 0.250   2.06
 4.01 Init -  63239  63136  104  2  2   81   64   101 0.340   6.76
 4.00 Prom -  64377  64338   40                              -5.55

 5.08 PlyA -  64399  64394    6                               1.05
 5.07 Term -  70093  69905  189  1  0   37   44   185 0.760   5.47
 5.06 Intr -  70659  70526  134  1  2   17   49    54 0.055  -6.16
 5.05 Intr -  71966  71854  113  1  2   69   40   137 0.079   6.10
 5.04 Intr -  76896  76763  134  0  2  108   30    78 0.371   2.52
 5.03 Intr -  77402  77288  115  1  1   69   84   109 0.362   8.13
 5.02 Intr -  84314  84208  107  2  2   74  111    -3 0.038  -1.31
 5.01 Init -  94602  94492  111  0  0   18   75   107 0.133   2.66
 5.00 Prom -  98321  98282   40                              -6.75

 6.04 PlyA -  99021  99016    6                               1.05
 6.03 Term - 100179  99998  182  1  2   55   41   208 0.813   9.59
 6.02 Intr - 100766 100229  538  2  1   77   -7   541 0.790  35.06
 6.01 Init - 101500 101444   57  1  0   16   94     8 0.372  -4.44
 6.00 Prom - 104020 103981   40                              -5.75

 7.00 Prom + 111466 111505   40                              -6.95
 7.01 Init + 111707 111849  143  1  2   69   98    69 0.851   5.65
 7.02 Intr + 113720 113862  143  2  2  130   76    84 0.814  10.48
 7.03 Term + 116154 116290  137  1  2   93   47    57 0.574  -0.70
 7.04 PlyA + 118066 118071    6                               1.05

 8.04 PlyA - 118895 118890    6                               1.05
 8.03 Term - 119702 119695    8  0  2  139   49     0 0.026  -1.75
 8.02 Intr - 126196 126086  111  2  0   94   80    84 0.050   7.63
 8.01 Init - 128150 128096   55  2  1   75   81    31 0.040   2.60
 8.00 Prom - 140284 140245   40                              -3.35

 9.00 Prom + 149565 149604   40                              -0.95
 9.01 Init + 163197 163278   82  2  1   72   69    72 0.503   4.88
 9.02 Term + 163284 163546  263  1  2   16   48   183 0.582   1.80
 9.03 PlyA + 167862 167867    6                               1.05

10.00 Prom + 169599 169638   40                              -2.05
10.01 Init + 181248 181352  105  2  0   37  100    81 0.415   4.55
10.02 Intr + 185187 185319  133  2  1   37   78    96 0.466   2.80
10.03 Term + 186146 186363  218  0  2  117   49   134 0.943   8.72
10.04 PlyA + 186378 186383    6                               1.05

11.06 PlyA - 188585 188580    6                               1.05
11.05 Term - 191532 191337  196  2  1  -49   37   242 0.507   1.30
11.04 Intr - 192477 192108  370  1  1   61   80   254 0.512  15.14
11.03 Intr - 194038 193684  355  1  1  -10   78   200 0.350   3.14
11.02 Intr - 195833 195734  100  1  1   93   80   117 0.669  10.59
11.01 Init - 199188 198824  365  0  2   34  -12   292 0.691   8.42

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term + 151645 151752  108  0  0   80   54   110 0.890   4.33


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596r:126457433_126658163|GENSCAN_predicted_peptide_1|235_aa
MPFVGCTPSSILAGLGFTYTPLNVAYAPLSAFQPRPWMPILSKMLSWNAGSGGSWHRAEV
PLPSLCSEGVQPAMWGGHTQVRMLGQPRVRAVSEGVIAEFSQVETSGISSCVQHRSAMTG
EIPSKTRTARQAWGTLRATRDNKTLLFQDQGSGPQRVINELKATQQMMGRIQCLLIIMRL
AALKSLLAVAQDCLFPVPILRCIWGVSTLASVSPNQTMTLASAPLRWSLKLVSPL

>gi568815596r:126457433_126658163|GENSCAN_predicted_CDS_1|708_bp
atgccttttgtaggctgcaccccttcttcaatcttggctggcttggggttcacttacacc
ccactgaatgtggcatatgctcctctgagtgccttccaacctaggccatggatgcctata
ctttctaaaatgctgtcttggaatgcaggttctggtggcagttggcatcgtgcagaggta
cccctcccttcactgtgctcggaaggagtccagccagccatgtggggaggtcacacgcag
gtgaggatgcttggccagcctagggtcagagctgtgagtgagggagtcatcgcagagttc
agccaggtcgagacctcaggtatctccagctgtgtccagcatcgaagtgcaatgactgga
gagattccaagcaagacgaggactgcccgccaagcctggggaaccctcagagccactaga
gataataagacattgttgtttcaagaccagggaagtgggccacagagagtgattaatgag
ctcaaggctacacagcagatgatgggccgcatccagtgtctgctcatcatcatgcgtctt
gctgccctcaagtcactcctagcagttgcccaggactgtttgttccccgttcctatcctc
aggtgtatctggggtgtttccaccctggcctcagtctcccctaaccaaaccatgacactg
gcctctgctcctctgcgctggtccctgaagcttgtctctcccctgtag

>gi568815596r:126457433_126658163|GENSCAN_predicted_peptide_2|136_aa
MVKSEAGFFSEPHRQPETSTASDTTHWISFILGSLQKAPCPLSLVGFTWLAVPPRSHASR
RICVQPESGQDVPQPVSALGASTWLKGTQCQNRDASDPEASEGMLQRPNSSFSPVVSPWL
SALMLLPVTCGCPLLA

>gi568815596r:126457433_126658163|GENSCAN_predicted_CDS_2|411_bp
atggttaaaagtgaggcaggatttttctcggagccgcatcgccagccggagacctccacg
gccagcgacaccacccactggatctcattcatcctgggctccctgcagaaggcaccctgc
ccactcagcctggtgggcttcacttggcttgcagtcccccctagatcccatgctagccga
aggatctgcgttcagcctgaatctgggcaggacgtgccacaacctgtttctgccttgggc
gccagcacctggctgaagggaacgcagtgccaaaacagggatgccagtgaccccgaagcc
tcagaagggatgttacagcgtcctaacagctcttttagtcctgttgtctcaccctggctg
tccgccctgatgctgcttcctgtcacatgtggctgccctctgctggcataa

>gi568815596r:126457433_126658163|GENSCAN_predicted_peptide_3|148_aa
MYQICREKDNRAYRGNGNRQTLKLTVKQLIMCGRGTASQDYHEQGIWNPIEEVCVTEISR
KAPANCKEPLSTHVNNTGGLGNVFLLIWEKGLFLMLCSVLDCKDDMPGLLGSLLIYTLAF
STAVTLFGPCWWSMSHSEGKGTPGLPEI

>gi568815596r:126457433_126658163|GENSCAN_predicted_CDS_3|447_bp
atgtatcagatctgcagagaaaaagacaacagggcttatcgtggcaatggaaacagacaa
acactaaagttaacagtcaaacagctgataatgtgtggaagaggcactgcatcccaagat
taccatgagcaagggatttggaatccaatagaagaagtttgcgtcactgagatatccagg
aaggctcctgctaactgcaaagagcccttaagtacccatgtgaataatacaggaggttta
ggaaacgttttcctcttaatatgggaaaagggactattcttaatgctctgctctgtgctg
gactgtaaggatgacatgcctggtcttcttgggtctctgctcatctataccctggctttt
tccactgccgtgaccctctttggtccctgctggtggtccatgtcacactcagagggtaaa
ggaacccctggacttcctgagatataa

>gi568815596r:126457433_126658163|GENSCAN_predicted_peptide_4|216_aa
MDIKPMNQDMIKRTSAGDNGYEESKTERSGWSCPGDAHAEMHMLTPRDLGCHSQPRPVGE
WTPGIIYQLDLLSLQLSTPHGRRSTQVSGCRGWDECFWALAGAELCVALGQQEESGDMNV
LKMVNVGDFIANKSGCQWDEELERGWSGKVLLYVSGCGASLINGVVFPCICRHTCTFYPL
QCSFPRQLMAQLYIWVCALTSAFPSPSLISTSRKAA

>gi568815596r:126457433_126658163|GENSCAN_predicted_CDS_4|651_bp
atggacattaaacccatgaatcaagacatgatcaagagaacttcagctggtgacaatggc
tatgaagaaagtaagacagagagaagtggttggagctgcccgggagacgcacatgctgaa
atgcacatgctgacacccagagacctgggatgtcatagccagccaagaccagtgggagaa
tggaccccaggcatcatctaccagttggacttactcagcctgcagctctcaacccctcat
gggaggaggagcacacaggtgagtgggtgcaggggctgggatgagtgcttctgggcgcta
gcaggagctgaactctgtgtggccttggggcagcaggaagaatcaggtgacatgaacgta
ttgaagatggtaaatgtgggggattttattgccaataaaagtggctgtcagtgggatgaa
gagctggaaaggggatggagtgggaaggtccttttatatgtcagtggatgtggggcatct
ttgattaatggggtggtgtttccctgcatttgcaggcacacctgcaccttctatccactg
cagtgctctttcccaagacagctgatggctcaactctacatctgggtctgtgctctgaca
tcagcttttccaagtccttctctgatctccacatctaggaaagcagcttga

>gi568815596r:126457433_126658163|GENSCAN_predicted_peptide_5|300_aa
MLPDLEHRTPSSSVLRLGLALPAPQACRQPTVGPCDCNLGILYSLTSPCTVSNNSLKSLA
ELLFLVSSSVRLRFCKCIALRTPQGLPVDPLTGLQDAGLDVTQNATMRALSELAIKKFSD
LLCLKVDHKTLIPEVLPYTQGKGMPHREAKKNLKDRDTDGGYYPQQINAGTENQTLRILT
YKEELYNDNTWTHGMEVMHELSNMDFHSPWLNWLWTLLSVPSASAKTNTKPPMWPHSLPP
VLFYNNTNALRQKIGTEEWGVAIHIPGNVEAALELAKAQKLEEFGGLRRRQEDERKFGTF

>gi568815596r:126457433_126658163|GENSCAN_predicted_CDS_5|903_bp
atgcttcctgatcttgaacatcggactccaagttcttcagttttgagacttggactggct
ctgcctgctcctcaagcttgcagacagcctactgtgggaccttgtgattgtaacctaggg
attctatattctctcactagcccatgcactgtatcaaacaattcattaaaatcattagct
gaattattatttctggtgtctagcagtgtccgcctcaggttttgtaaatgtattgctctc
agaacacctcagggacttcctgtggacccactcactggtctacaggatgcggggcttgac
gtcacacagaatgctaccatgagggctctttctgagctggctataaagaaattctctgac
ctactttgtttgaaagtagatcataagaccctcattccagaggtcctgccctacacccag
gggaaaggaatgccacacagagaggccaagaagaatctgaaagacagggacacggatgga
ggctattatcctcagcaaattaatgcaggaacagaaaaccaaacactgcgtattctcaca
tataaggaggagctgtacaatgacaacacatggacacatgggatggaggttatgcatgag
ctcagcaatatggacttccactcaccatggctgaactggctgtggacattgctgagtgtg
ccatctgccagcgcaaagaccaatactaagcctccaatgtggccccattccctgcctccg
gtactattttataacaacacaaatgcgctaagacagaaaattggcactgaggagtggggt
gttgctatacacatacctggaaatgtggaagcagctttggaactggctaaggcacagaag
ttggaagagtttggagggctcagaagaagacaggaagatgaaagaaagtttggaactttt
tag

>gi568815596r:126457433_126658163|GENSCAN_predicted_peptide_6|258_aa
MFFFSSLFTFKTVDLKRCLPPPTPDTEHPVTDKNELVQKAKLAEQAEQYDDMAACMKSVT
KQGAELSNEERNLLSVAYKNVVGARKSSWRVVSSIEQKTEGAEKKQQMAREHREKIETEL
RDICNDVLSLLEKFLIPNASQAESKVFYLKMKGDYYRYLTEVTAGDDKIGIVDQSQQAYQ
EAFEISKKEMQPTHPVRLEKACCLAKTAFDEAIAELDTLSEESYKDSMLIMQLLRDNLTL
WTSDTQGDEAEAGEGGEN

>gi568815596r:126457433_126658163|GENSCAN_predicted_CDS_6|777_bp
atgtttttctttagctctctgttcacatttaagactgttgatttaaagcgttgtctacca
ccacccactccggacacagaacatccagtcacggataaaaatgagctggttcagaaggcc
aaactggccgagcaggctgagcaatatgatgacatggcagcctgcatgaagtctgtaact
aagcaaggagctgaattatccaatgaggagaggaatcttctctcagttgcttataaaaat
gttgtaggagcccgtaagtcatcttggagggtcgtctcaagtattgaacaaaaaacggaa
ggtgctgagaaaaaacagcagatggctcgagaacacagagagaaaattgagacggagcta
agagatatctgtaatgatgtattgtctcttttggaaaagttcttgatccccaatgcttca
caagcagagagcaaagtcttctatttgaaaatgaaaggagattactaccgttacttgact
gaggttactgctggtgatgacaagatagggattgtggatcagtcacaacaagcataccaa
gaagcttttgaaatcagcaaaaaagaaatgcaaccaacacatcctgtcagattggagaaa
gcctgctgtcttgcaaagaccgcttttgatgaagccattgctgaacttgatacattaagt
gaagagtcatacaaagacagcatgctaataatgcaattactgagagacaacttgacattg
tggacatcggatacccaaggagacgaagctgaagcaggagaaggaggggaaaattaa

>gi568815596r:126457433_126658163|GENSCAN_predicted_peptide_7|140_aa
MSPHKDFRINFHSSIAHNSQKVGTTDEWIMVNGGTSNNRILAQQQKPQPALNILCHCPKR
VCNMQLAELRGCQRMLSGCQLQCEQCLWKAMRGSRLQCLDWTCRNDPNCGYAFNTVMVLL
LNMGASPLEYMSPMHIRQET

>gi568815596r:126457433_126658163|GENSCAN_predicted_CDS_7|423_bp
atgtctccacacaaagactttagaataaattttcatagcagcattgctcataatagccaa
aaagtaggaacaactgatgaatggataatggtgaatggtggtacatccaataatagaata
ttggctcagcaacagaaaccacagccagcccttaatatcctttgccactgcccaaagagg
gtctgcaatatgcagctagcagagctgcggggatgccagcggatgctgagcggatgccag
ctacaatgcgagcagtgcctctggaaggccatgaggggctccagattgcagtgtctggat
tggacttgtagaaatgacccaaattgtggttatgctttcaatacagtcatggtgctgctt
ttgaacatgggggcgtctccactcgaatacatgagtccaatgcatatacgtcaagagact
tga

>gi568815596r:126457433_126658163|GENSCAN_predicted_peptide_8|57_aa
MGQAQDRHRRIGKKKGVTGPIVSIGYCLAGEFTELALALLDWPGRGPFSQGMLKAEF

>gi568815596r:126457433_126658163|GENSCAN_predicted_CDS_8|174_bp
atgggacaggcacaggacagacataggagaataggcaagaagaaaggagtaacaggtccc
attgtaagcattggctattgcttggctggtgagtttacggaattagcattggcattgctt
gactggccaggtcgtggacctttttctcaagggatgctcaaggcagaattctga

>gi568815596r:126457433_126658163|GENSCAN_predicted_peptide_9|114_aa
MELWVQQAVTSPLHAGHCSEHIAHIHSSPRQLGGGGNPVIDEDGALEVRNLLGSTQLASR
AEGLDLEAGLLHCGTTDIWGQIVPHYGAVLCIVGYLAASLAPTHWTSVTPLSQL

>gi568815596r:126457433_126658163|GENSCAN_predicted_CDS_9|345_bp
atggagctgtgggtccagcaagcagtcaccagccccttgcatgctggacactgttctgag
cacattgcacacattcactcctccccacgacagctgggaggaggtgggaacccagttata
gatgaggatggagccttagaggtgagaaacctgctggggagcacccagctagcaagcaga
gcggagggacttgaccttgaagcagggcttctccactgtggcactactgacatttggggc
cagattgtccctcattatggggctgtcctgtgcattgtaggatatttggcagcatccctg
gcccccacccactggacatcagtaacacccctctcccagctgtga

>gi568815596r:126457433_126658163|GENSCAN_predicted_peptide_10|151_aa
MKGLKKRLGNLELWVVTPVSRDIDNGIGLMVYWEKRYEAFVFIIINEAANLPGEPASTLQ
STSDTDVINLRGGKVTKQSGVQHESPPCSCAVAPGVHGDMGMWEVGREPKESELAALPWQ
GFRGRQPWLEFQLRHRAAVRESLLWSSASVK

>gi568815596r:126457433_126658163|GENSCAN_predicted_CDS_10|456_bp
atgaagggccttaagaagagactgggaaacttggaactttgggtggtgactccagtaagc
agggatattgacaatggtattggcttgatggtgtactgggagaagcgttatgaagccttt
gtctttatcatcattaatgaagctgcaaacctcccaggagagcctgcctcaaccctccag
agcacgtcagacacagatgtcattaacctacgtgggggcaaagtcactaagcaaagcggt
gtccagcatgaatcacccccatgcagctgtgccgtggcaccaggagtccatggggacatg
gggatgtgggaggtgggaagggagcccaaggagagtgagctggcagcactgccatggcag
ggctttagagggcgacagccctggttggaattccagctcaggcaccgagccgctgtgcga
gagtcactcctctggtcctcagcttctgtcaaatga

>gi568815596r:126457433_126658163|GENSCAN_predicted_peptide_11|461_aa
MPRTKKQKAGDTPWEGGLAASPARSAWRLRVGVRDAGQGLRAAQAPGNRGWSRGSEPSGR
LLRLEARHGPGHQGVRGRGSAPGCCGPRPPVGPQDPSPRRVLTEAERPRRAVGASRRPHS
WAEETAHGKLPSKSSVLVPYWEWSWRSPAAVAVSWPHQVSTVRMRALIGKEWDPATWNGD
MWEDPDEAGDTELINSDEHFWPEVTASPSPVVATSSPPPMLLSAFPPLSEEINPALPEAV
ARQNNVDSPQKPPPTPLFASRPITRLKAWWAPRVSECIIGIDIFSSWQNPCIGSLTGRVR
ATVVGKAKWKPLELPSPRKIANQKEYHIPGGIVEITATIKDLKDAGVAIPTTSSFSSPIW
PVQKTDGAWRMTVDYCKLNQVVTPITAAVPDVVSLLDFEWGPEQQKALQQVQAAVQAALP
LGPYDPSDPVVLEVLAFGKLHRRITVEASRILDQGPVISCR

>gi568815596r:126457433_126658163|GENSCAN_predicted_CDS_11|1386_bp
atgccccgcacaaagaaacagaaagcgggcgacacgccctgggagggcgggctggcggct
tctccagctcggagcgcgtggaggctgcgcgtaggggtccgggacgcgggacagggactc
cgcgcagcccaggcgccggggaaccggggctggagtcggggatctgagcccagcggacgc
ctcctccgcctggaggcccggcacggaccgggacaccagggcgtccgtggccgtggctcg
gcccctggctgctgcgggccgcggcctccagtgggtccccaggacccttccccacggcgg
gtactcaccgaggctgagaggccacgccgtgctgttggggcttctcgtcgaccacattcc
tgggcggaagaaactgctcatgggaaactgccttccaaatcctcagtgctagttccttat
tgggagtggagttggcggtcccctgctgctgttgctgtctcctggcctcaccaggtgtct
actgttagaatgagggcattgattggaaaagaatgggaccctgcaacttggaatggggac
atgtgggaggaccctgatgaagctggggacactgagttaataaactctgatgaacatttt
tggccagaagtaacagcttccccatccccagtagtggcaacgtcctctcccccacccatg
ctgctatcagcctttccacctttgtctgaagagataaaccctgcgctgcctgaggcagtt
gccaggcaaaataatgttgattctcctcagaagccacccccaacacctctgtttgcttct
aggcctataactagactaaaggcttggtgggcccctagagtgtcagaatgcataattggt
atagacatatttagcagctggcagaacccctgcattggctccctgactggtagggtgagg
gctactgttgtgggaaaggccaaatggaagccattggagctgccatcacctagaaaaatt
gcaaatcaaaaagaataccacatccctggagggattgtggagattactgccaccatcaag
gacttaaaagatgcaggggtggcgattcccaccacatcctcattcagctctcccatttgg
cctgtgcagaagacagatggagcttggagaatgacagtggattattgtaagcttaaccaa
gtggtgactccaattacagctgctgtaccagatgtggtttcattgcttgattttgagtgg
ggtccagaacagcagaaggctctgcaacaggtccaggctgctgtgcaagctgctctgcca
cttgggccatatgacccatcagatccagtggtgcttgaggtgttagcctttgggaagctc
cataggcgaatcacagtggaagcctctaggattttggatcaaggccctgtcatctcctgc
agatag