GENSCAN 1.0	Date run:  6-Nov-116	Time: 18:26:50

Sequence gi568815596f:68874636_69080820 : 206185 bp : 39.87% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   7875   7966   92  1  2  114   88    39 0.054   5.29
 1.02 Term +  14917  15120  204  0  0   89   46    96 0.072   1.89
 1.03 PlyA +  16654  16659    6                              -1.75

 2.03 PlyA -  16707  16702    6                               1.05
 2.02 Term -  17690  17530  161  0  2   64   31   131 0.743   2.12
 2.01 Init -  21329  20933  397  2  1   78   92   207 0.491  17.01
 2.00 Prom -  46264  46225   40                              -4.65

 3.00 Prom +  47660  47699   40                              -4.65
 3.01 Init +  49973  50029   57  1  0   95  111    75 0.450  11.86
 3.02 Intr +  51050  51191  142  1  1   88   93    98 0.989   9.31
 3.03 Intr +  52105  52179   75  2  0   93   81    32 0.729   1.57
 3.04 Intr +  54054  54220  167  1  2   97   94    40 0.581   4.26
 3.05 Term +  57637  57867  231  0  0  103   40   129 0.413   5.09
 3.06 PlyA +  59239  59244    6                              -0.45

 4.05 PlyA -  59631  59626    6                               1.05
 4.04 Term -  61383  61198  186  0  0   83   50   111 0.904   3.31
 4.03 Intr -  62415  62394   22  2  1  105   98    37 0.894   3.03
 4.02 Intr -  65642  65471  172  0  1   78   46    47 0.015  -2.42
 4.01 Init -  69572  69161  412  2  1   79   81   333 0.910  28.42
 4.00 Prom -  70382  70343   40                              -8.65

 5.06 PlyA -  70523  70518    6                              -0.45
 5.05 Term -  70815  70733   83  1  2   99   45    47 0.771  -1.62
 5.04 Intr -  71825  71669  157  2  1   44   94   100 0.817   4.86
 5.03 Intr -  72622  72512  111  1  0   62   91   108 0.976   8.16
 5.02 Intr -  75628  75491  138  1  0   85   77   105 0.980   8.84
 5.01 Init -  84466  84440   27  1  0   98   73    19 0.254   1.13
 5.00 Prom -  84630  84591   40                              -3.85

 6.00 Prom +  88937  88976   40                              -6.75
 6.01 Init +  89142  89204   63  2  0   56   75    72 0.180   3.90
 6.02 Intr +  99221  99388  168  1  0   53   77   165 0.515  11.12
 6.03 Intr + 103002 103139  138  2  0   60   51   208 0.823  14.04
 6.04 Intr + 104236 104346  111  0  0   87   93    42 0.896   4.26
 6.05 Intr + 105278 105425  148  1  1   76  113   129 0.895  13.09
 6.06 Term + 107108 107115    8  0  2   98   50     0 0.210  -5.75
 6.07 PlyA + 107174 107179    6                               1.05

 7.06 PlyA - 107236 107231    6                               1.05
 7.05 Term - 110744 110585  160  1  1   21   44   170 0.445   2.33
 7.04 Intr - 114416 114265  152  2  2    9   62   158 0.235   3.34
 7.03 Intr - 120905 120782  124  1  1   67  105    77 0.609   6.97
 7.02 Intr - 136657 136482  176  1  2   45   64   116 0.102   2.72
 7.01 Init - 139119 138352  768  0  0   60   26   293 0.137  13.04
 7.00 Prom - 140940 140901   40                              -6.95

 8.00 Prom + 145305 145344   40                              -4.55
 8.01 Sngl + 148604 148960  357  1  0   41   42   585 0.997  45.01
 8.02 PlyA + 149452 149457    6                               1.05

 9.03 PlyA - 155374 155369    6                               1.05
 9.02 Term - 158056 157850  207  1  0   45   41   198 0.651   7.16
 9.01 Init - 162633 162493  141  0  0   66   63    55 0.295   0.98
 9.00 Prom - 163968 163929   40                              -5.55

10.00 Prom + 180641 180680   40                              -5.85
10.01 Init + 184446 184580  135  2  0   50   64   137 0.065   7.69
10.02 Intr + 197119 197152   34  0  1   83  116     7 0.523  -0.12
10.03 Intr + 198387 198466   80  1  2   68   99    76 0.872   5.05
10.04 Intr + 200955 201023   69  2  0  121   80    88 0.664   9.76
10.05 Intr + 202773 202853   81  2  0   70   89   156 0.997  12.82
10.06 Term + 203895 204083  189  2  0  110   48    87 0.879   3.37
10.07 PlyA + 205761 205766    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init -  62704  62610   95  1  2   75   14   108 0.872   2.00
S.002 Init + 184446 184584  139  2  1   50   33   148 0.808   5.85


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596f:68874636_69080820|GENSCAN_predicted_peptide_1|98_aa
XPSVNPVPSSTKPVNSLTVHTQSTCFHIPRKPFSTQYWTHIPLEPVAAAASCDKWPRIAD
AHHSPPSVVERVISDQIPAAATSSPYLGIGDFYEGGWM

>gi568815596f:68874636_69080820|GENSCAN_predicted_CDS_1|297_bp
ngaccctccgtcaaccctgtcccatcatcgaccaagcccgtaaactctcttactgtgcac
acacagtccacttgtttccatattccaaggaagcctttcagcacccaatattggacacac
attcctttagagcctgtggcggccgctgcctcgtgcgacaagtggccgcgcattgcagat
gcacaccacagtccaccaagcgtggtggaacgggttatctcagatcaaattcctgcggca
gccacttcctctccttatctgggaatcggggatttttatgagggggggtggatgtaa

>gi568815596f:68874636_69080820|GENSCAN_predicted_peptide_2|185_aa
MDPNQEEIPDLPEKEFRRLVIKLIREGPEKGKAQCKEIQKMIQEVKEEIFKEIDSLKKKQ
KVQETLDTLLEMQNALESLSNRTEQVEERNSELKDKVFRLIQSNKDKEKTIRKYEQLGMV
AHACNPSTLGGRVLEVLARAVRQEKETKGIQIRKEEVKLSLFADDVIIYLGNPKDSSRKL
LELIK

>gi568815596f:68874636_69080820|GENSCAN_predicted_CDS_2|558_bp
atggatccaaaccaagaagaaatccctgatttacctgaaaaagaattcaggaggttagtt
attaagctaatcagggagggaccagagaaaggtaaagcccaatgcaaggaaatccaaaaa
atgatacaagaagtgaaggaagaaatattcaaggaaatagatagcttaaagaaaaaacaa
aaagttcaggaaacgttggacacacttttagaaatgcaaaatgctctggaaagtctcagc
aatagaactgaacaagtagaagaaagaaattcagagctcaaagacaaggtcttcagatta
atccaatccaacaaagacaaagaaaaaacaataagaaaatatgaacagctgggcatggtg
gctcatgcctgtaatccaagcactttgggaggtcgagtactggaagtcttagccagagca
gtcagacaagagaaagaaacaaagggcatccaaatccgtaaagaggaagttaaactgtca
ctgtttgctgacgacgtgatcatttaccttggaaaccctaaggactcctccagaaagctc
ctagaattgataaaataa

>gi568815596f:68874636_69080820|GENSCAN_predicted_peptide_3|223_aa
MDKAVFPSLDDISKALDKQAFKYYPSTRGLTYTVLPSWVKNLAQYGKPIKNMCRDDPTYF
AQQQKEGTALAIDSNSCFEIQLLSFMGLFICDTRFPAGTGFLPEMPGSRPAALPMCIITL
GCHWLGCDSSLLRKSQHTPLDLRGLVKSREEPAVSKLRTVGMGELARQPQEAAAQCSFSG
YLLTLCSQFPFQEIRSSAPYPAWNVLLLLVLLSAWGGETHPIT

>gi568815596f:68874636_69080820|GENSCAN_predicted_CDS_3|672_bp
atggacaaggcagtcttcccaagtttggatgacattagcaaggccctggacaagcaggct
tttaagtattacccgtctactcgcggcctgacttacactgttttacccagctgggtcaag
aacttagcacagtatggaaagcccattaagaacatgtgcagagatgaccccacctacttt
gcccagcagcaaaaagaaggtactgccctggcaattgactccaattcttgttttgaaatc
caacttctgtcctttatgggactcttcatctgcgatactcgctttccagctgggactggt
ttccttccagaaatgccaggttcaaggcctgctgccctcccgatgtgcatcatcacactt
ggctgtcattggctgggctgtgatagctccctcctgagaaagagccagcacacccctcta
gaccttagaggacttgtcaagtctagggaagagccagctgtgtccaaactcaggaccgtg
ggtatgggtgagctggctcgccagccacaggaggcagctgcccagtgttcattttctggc
tacctgctcactctgtgctctcagtttcctttccaagagatcaggagcagtgccccttat
cctgcctggaatgtgctgcttctccttgtcctgctgtctgcttggggcggagagacccac
cccataacataa

>gi568815596f:68874636_69080820|GENSCAN_predicted_peptide_4|263_aa
MGALLHLSAFRQRGSCLNPPVHTDPNPKGPGEGAVSRSGRPRAVAPECGTGPSASAEEEP
ILSENSQRGVSRTGSWAGVEPRRASLHRAGPVSVGPVSLLDLCLKEPNDLEHLTTTESHG
HSASDQGSLPSRPRRRPELEKNYSKIHMEQKRAQTAKAILSKQNKTNEQTKNKAEDITLP
DFKLHYKATVTKTAGSFAGSGQGINPSAKGDSKCNAACLTTGYTGSDLTSDSPDFNLLCR
VLDPQSLSAQGFKVWSNHSPAKQ

>gi568815596f:68874636_69080820|GENSCAN_predicted_CDS_4|792_bp
atgggtgctttgctccacttgagtgcattccggcagcgtgggagctgtttgaatccccca
gtgcacacagatcccaaccccaagggtccaggggagggagctgtgagcagatccggacgt
cccagggctgtggctccggagtgcggaactgggcccagtgcttcagcagaagaggagccc
atactctcagaaaactctcagagaggggtgagtcgcacaggttcctgggctggtgtggaa
cctaggcgtgcctccctccacagagctggtccagtaagtgtggggcctgtctccctgctg
gacctctgcctgaaggagcccaacgacctggaacacctaacaacaacagaaagtcacggc
cacagtgccagtgatcaggggtccctcccctcaagaccgaggaggagacctgaattagaa
aaaaactattctaaaattcatatggaacaaaaaagagcccaaacagccaaagcaatccta
agcaaacaaaacaaaacaaatgaacaaacaaaaaacaaagctgaagacatcacactacca
gacttcaaactacactacaaagctacagtaaccaaaacggcagggtcctttgctggcagt
ggacagggcatcaatccttcagcaaagggagacagcaaatgcaatgctgcctgtctgacc
acgggatatactggttcagatctcactagtgatagcccagacttcaacttgctttgcagg
gtattagatccccaatcccttagtgcccagggattcaaagtttggagtaatcacagccct
gccaaacagtag

>gi568815596f:68874636_69080820|GENSCAN_predicted_peptide_5|171_aa
MSIICFELYVFNIISPSNNGGNVQETVTIDNEKNTAIINIHAGSCSSTTIFDYKHGYIAS
RVLSRRACFILKMDHQNIPPLNNLQWYIYEKQALDNMFSSKYTWVKYNPLESLIKDVDWF
LLGSPIEKLCKHIPLYKGEVVENTHNVGAGGCAKAGLLGILGISICADIHV

>gi568815596f:68874636_69080820|GENSCAN_predicted_CDS_5|516_bp
atgagcatcatctgctttgaactatatgtttttaacatcatcagcccaagcaacaatggt
ggcaatgttcaggagacagtgacaattgataatgaaaaaaataccgccatcattaacatc
catgcaggatcatgctcttctaccacaatttttgactataaacatggctacattgcatcc
agggtgctctcccgaagagcctgctttatcctgaagatggaccatcagaacatccctcct
ctgaacaatctccaatggtacatctatgagaaacaggctctggacaacatgttctccagc
aaatacacctgggtcaagtacaaccctctggagtctctgatcaaagacgtggattggttc
ctgcttgggtcacccattgagaaactctgcaaacatatccctttgtataagggggaagtg
gttgaaaacacacataatgtcggtgctggaggctgtgcaaaggctgggctcctgggcatc
ttgggaatttcaatctgtgcagacattcatgtttag

>gi568815596f:68874636_69080820|GENSCAN_predicted_peptide_6|211_aa
MTTMLRALTEKVDNMQEDMGNAASEISKRDRVMSIYALQKDNLRVNEENALEYKKLVTRV
INCMTVVKVQVRGAVGKNINVNDDNNNAGSGQQSVSVNNEHNVANVDNNNGWDSWNSIWD
YGNGFAATRLFQKKTCIVHKMNKEVMPSIQSLDALVKEKKLQGKGPGGPPPKGLMYSVNP
NKVDDLSKFGKNIANMCRGIPTYMAEEMQVP

>gi568815596f:68874636_69080820|GENSCAN_predicted_CDS_6|636_bp
atgactacaatgctaagagcactaacggaaaaagtagacaacatgcaagaggacatgggt
aatgctgccagcgaaatttccaagcgtgatagagtcatgtctatctatgcacttcagaaa
gacaacctcagggttaatgaagaaaatgcattggaatataagaaactggtgaccagagtg
atcaattgcatgactgttgtgaaagtccaggtgaggggagctgtgggcaagaatatcaac
gtcaatgatgacaacaacaatgctggaagtgggcagcagtcagtgagtgtcaacaatgaa
cacaatgtggccaatgttgacaataacaacggatgggactcctggaattccatctgggat
tatggaaatggctttgctgcaaccagactctttcaaaagaagacatgcattgtgcacaaa
atgaacaaggaagtcatgccctccattcaatcccttgatgcactggtcaaggaaaagaag
cttcagggtaagggaccaggaggaccacctcccaagggcctgatgtactcagtcaaccca
aacaaagtcgatgacctgagcaagttcggaaaaaacattgcaaacatgtgtcgtgggatt
ccaacatacatggctgaggagatgcaagtgccatag

>gi568815596f:68874636_69080820|GENSCAN_predicted_peptide_7|459_aa
MRSCPQATLPTSPARGESVFARLAWGGGDNSRHLLVQNEVQVKSAVAGWTPILPASPLPG
ADEHQSGQREPLEADAEGSPLRRGHGPQPGESRVRSFPRSANSPRPSGTRHPRALPRGSF
IPPRSLATPRKQLSGGVQGFPSGFRSDAVSGFRVSRIPILSSASFKGEGCLGPGPPGSSR
GRAELLQWKEFRPDGSLSQILNMMGGGGGFKLFLVGAVLCLLSFLSAPLSRSYGEESSKA
ATLWTKAAKARVGPAGLDDLKDSEEIYRNQMGKGKQKHWWELVREEKGYDNVMERVFMGL
ARNRKELECGKRVEGHLPHFEVKGVGEGAKLMLKAFLKGSDSPGKGRQDQHEEGTLGTAA
AAIQLILAAIEESSRLSETCMVLASCRTESDQEGPSDKNILPNIQTCYRFMDDDRRHETS
GSETKDFITRVTASSVSMSMFVSVLVAYKSHRSDDVDQD

>gi568815596f:68874636_69080820|GENSCAN_predicted_CDS_7|1380_bp
atgcgctcctgtccccaggcgaccctgccaacgagcccggcccggggcgaaagcgttttc
gcccgcttagcctggggtgggggggacaactcgcggcacttacttgtccaaaatgaagta
caggtcaaatccgccgtagcaggctggacccccatcctccctgcgtcccccttgcccggc
gcagatgagcaccagagtggccaaagagagccactggaagccgatgccgagggctctccg
ctccgccgtggccatggcccgcagcccggggagagcagggtccgctccttcccacgctcc
gcgaactcgccacgaccctcagggacgcgccatccgcgggcccttcctcgcgggtccttt
attccccctcgctccctcgcaactccccggaagcaattgtctggaggagttcaaggtttc
ccctctggtttccgctccgatgctgtttctgggtttcgggtttcaaggatcccaatcctg
tcctccgcttcttttaaaggggagggctgcctcggtccggggccgccgggcagctcccga
ggccgcgccgagcttttgcaatggaaggagttccgtcccgacggttctttgtcccagatt
ttaaatatgatgggggggggggggggtttcaaattgttcttggtgggggcagtgctttgc
cttctctccttcctctctgcccccctttcgcgttcttacggggaagaaagttcaaaggct
gccaccttgtggacaaaggcggcgaaagcacgcgtgggacccgcgggactcgatgacttg
aaagacagtgaggaaatctatagaaatcagatgggtaagggaaagcagaaacactggtgg
gagctggtaagagaagaaaagggatatgacaatgtgatggagagagtgtttatgggattg
gcaaggaataggaaagagcttgaatgtggaaagcgggtggagggacaccttccccacttt
gaagtgaaaggggttggagagggagctaagctaatgctaaaagcctttttaaagggctct
gacagccctggaaaggggagacaggaccaacacgaagagggaactctggggacggcagca
gctgcaattcagcttattctggcagccatcgaggagtcttccaggctcagtgagacatgt
atggttctggcttcatgtagaactgagagtgaccaggaaggcccttcagacaaaaatata
ctcccaaatatacagacttgctatcgtttcatggatgatgacagaagacatgagacttct
ggatcagagacaaaggactttattactcgtgtcacagcaagcagtgtgagcatgagcatg
tttgtgtcagtgctcgttgcctataagtctcatagaagtgatgatgtagaccaagattga

>gi568815596f:68874636_69080820|GENSCAN_predicted_peptide_8|118_aa
MSAETIDGDGDGYGGGGGRDDKDDGDGSGDGDSDSGDYGNVDSCDEDDDGDKDNGDGGGG
DSDSDDDNGSSDDSDGGGSDDGDGDMVVVVEVEMMMMMMMMAVVMVVVVLVQKQNMVL

>gi568815596f:68874636_69080820|GENSCAN_predicted_CDS_8|357_bp
atgagtgctgagacgatagatggtgatggtgatggttatggtggtggaggtggacgtgat
gataaagatgatggtgatggtagtggtgatggtgacagtgatagtggtgattatggcaat
gttgatagttgtgatgaagatgatgatggtgataaggataatggtgatggtggtggtggt
gatagtgatagtgatgatgataatggtagtagtgatgatagtgatggtggtggtagtgat
gatggtgatggtgatatggtggtggtggtggaggtggagatgatgatgatgatgatgatg
atggcagtggtcatggtggtggtggtgttagtgcagaaacagaatatggtcctctaa

>gi568815596f:68874636_69080820|GENSCAN_predicted_peptide_9|115_aa
MKRKSLYCSWKLPDLLPTEPQLFCLGLDKQPGFGTQMALANSRDLREIQHKSTVVKNTDN
GLVTQKVFPIIEMHSCGSIPHTRQIHRDEATVATLHPPERSKGDGSTSSGESGCG

>gi568815596f:68874636_69080820|GENSCAN_predicted_CDS_9|348_bp
atgaagaggaaaagcctctattgctcatggaagcttcctgatcttttgccaactgaacct
caactattctgccttggcttggataaacagcctgggtttgggactcagatggctctcgcc
aattcccgtgacttacgtgaaattcaacacaaaagcactgttgttaagaatacagacaat
gggttagtaacccaaaaggtatttcccataattgaaatgcacagctgcggctccattcct
cacactcgccagattcacagagatgaagccacagtagccactttgcatcccccagaaaga
tcaaagggggatgggtcaacatcgtcgggtgagagtggctgtggatga

>gi568815596f:68874636_69080820|GENSCAN_predicted_peptide_10|195_aa
MEPTAGEDAMNIVEITRNLEYSINLVDRAATRFERIRSNFERSSMASEQIYYENRQGYRT
ASVIIALTDGELHEDLFFYSEREANRSRDLGAIVYCVGVKDFNETQLARIADSKDHVFPV
NDGFQALQGIIHSGLLGAPAEWNAEWEVRSSEPGNPEFHWPTYLTLRDPWTFLVWKQGLM
MTYIIGLFEDYKDYW

>gi568815596f:68874636_69080820|GENSCAN_predicted_CDS_10|588_bp
atggaacctactgctggtgaagatgctatgaacattgttgaaattacaaggaacttagaa
tattccataaacttagttgatagagcagcaacaaggtttgagaggattcgctccaatttt
gaaagaagttctatggccagtgagcagatttattatgaaaacagacaagggtacaggaca
gccagcgtcatcattgctttgactgatggagaactccatgaagatctctttttctattca
gagagggaggctaataggtctcgagatcttggtgcaattgtttactgtgttggtgtgaaa
gatttcaatgagacacagctggcccggattgcggacagtaaggatcatgtgtttcccgtg
aatgacggctttcaggctctgcaaggcatcatccactcaggtttgctaggagctccagca
gagtggaatgcagagtgggaagtaagaagctcagagcccggcaacccagagtttcattgg
cccacgtacttaacacttagagatccttggacatttcttgtttggaaacagggactgatg
atgacttacatcataggcttgtttgaggattacaaggattactggtga